Search results for "Alexander E. Kel"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
1	Boris Sobolev, Dmitry Filimonov, Alexey Lagunin, Alexey Zakharov, Olga Koborova, Alexander E. Kel, Vladimir Poroikov	Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates.	BMC Bioinformatics	2010	DBLP DOI BibTeX RDF
1	Denitsa Alamanova, Philip Stegmaier, Alexander E. Kel	Creating PWMs of transcription factors using 3D structure-based computation of protein-DNA free binding energies.	BMC Bioinformatics	2010	DBLP DOI BibTeX RDF
1	Holger Michael, Jennifer Hogan, Alexander E. Kel, Olga V. Kel-Margoulis, Frank Schacherer, Nico Voss, Edgar Wingender	Building a knowledge base for systems pathology.	Briefings in Bioinformatics	2008	DBLP DOI BibTeX RDF
1	Stefan Posch, Jan Grau, André Gohr, Irad E. Ben-Gal, Alexander E. Kel, Ivo Grosse	Recognition of cis-Regulatory Elements with Vombat.	J. Bioinformatics and Computational Biology	2007	DBLP DOI BibTeX RDF
1	Fedor Kolpakov, Vladimir Poroikov, Ruslan N. Sharipov, Yury V. Kondrakhin, Alexey Zakharov, Alexey Lagunin, Luciano Milanesi, Alexander E. Kel	CYCLONET - an integrated database on cell cycle regulation and carcinogenesis.	Nucleic Acids Research	2007	DBLP DOI BibTeX RDF
1	Jan Grau, Jens Keilwagen, Alexander E. Kel, Ivo Grosse, Stefan Posch	Supervised Posteriors for DNA-motif Classification.	German Conference on Bioinformatics	2007	DBLP BibTeX RDF
1	Alexander E. Kel, Nico Voss, Ruy Jauregui, Olga V. Kel-Margoulis, Edgar Wingender	Beyond microarrays: Finding key transcription factors controlling signal transduction pathways.	BMC Bioinformatics	2006	DBLP DOI BibTeX RDF
1	Alexander E. Kel, Tatiana Konovalova, T. Waleev, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender	Composite Module Analyst: a fitness-based tool for identification of transcription factor binding site combinations.	Bioinformatics	2006	DBLP DOI BibTeX RDF
1	T. Waleev, D. Shtokalo, Tatiana Konovalova, Nico Voss, Evgeny Cheremushkin, Philip Stegmaier, Olga V. Kel-Margoulis, Edgar Wingender, Alexander E. Kel	Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm.	Nucleic Acids Research	2006	DBLP DOI BibTeX RDF
1	V. Matys, Olga V. Kel-Margoulis, Ellen Fricke, Ines Liebich, Sigrid Land, A. Barre-Dirrie, Ingmar Reuter, D. Chekmenev, Mathias Krull, Klaus Hornischer, Nico Voss, Philip Stegmaier, Birgit Lewicki-Potapov, H. Saxel, Alexander E. Kel, Edgar Wingender	TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes.	Nucleic Acids Research	2006	DBLP DOI BibTeX RDF
1	Igor V. Deyneko, Björn Bredohl, Daniel Wesely, Yulia M. Kalybaeva, Alexander E. Kel, Helmut Blöcker, Gerhard Kauer	FeatureScan: revealing property-dependent similarity of nucleotide sequences.	Nucleic Acids Research	2006	DBLP DOI BibTeX RDF
1	Mathias Krull, Susanne Pistor, Nico Voss, Alexander E. Kel, Ingmar Reuter, Deborah Kronenberg, Holger Michael, Knut Schwarzer, Anatolij Potapov, Claudia Choi, Olga V. Kel-Margoulis, Edgar Wingender	TRANSPATH®: an information resource for storing and visualizing signaling pathways and their pathological aberrations.	Nucleic Acids Research	2006	DBLP DOI BibTeX RDF
1	Xin Chen, Jian-min Wu, Klaus Hornischer, Alexander E. Kel, Edgar Wingender	TiProD: the Tissue-specific Promoter Database.	Nucleic Acids Research	2006	DBLP DOI BibTeX RDF
1	Tatiana Konovalova, Tagir Valeev, Evgeny Cheremushkin, Alexander E. Kel	Composite Module Analyst: Tool for Prediction of DNA Transcription Regulation. Testing on Simulated Data.	ICNC	2005	DBLP DOI BibTeX RDF
1	Alexander E. Kel, Tatiana Konovalova, Tagir Valeev, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender	Composite Module Analyst: A Fitness-Based Tool for Prediction of Transcription Regulation.	German Conference on Bioinformatics	2005	DBLP BibTeX RDF
1	Maciej Swat, Alexander E. Kel, Hanspeter Herzel	Bifurcation analysis of the regulatory modules of the mammalian G1/S transition.	Bioinformatics	2004	DBLP DOI BibTeX RDF
1	Alexander E. Kel, Yuri Tikunov, Nico Voss, Edgar Wingender	Recognition of multiple patterns in unaligned sets of sequences: comparison of kernel clustering method with other methods.	Bioinformatics	2004	DBLP DOI BibTeX RDF
1	Yutaka Suzuki, Riu Yamashita, Matsuyuki Shirota, Yuta Sakakibara, Joe Chiba, Junko Mizushima-Sugano, Alexander E. Kel, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Toshihisa Takagi, Kenta Nakai, Sumio Sugano	Large-scale collection and characterization of promoters of human and mouse genes.	In Silico Biology	2004	DBLP BibTeX RDF
1	Alexander E. Kel, Nico Voss, Tatiana Konovalova, Dmitri Tchekmenev, P. Wabnitz, Olga V. Kel-Margoulis, Edgar Wingender	From Composite Patters to Pathways - Prediction of Key Regulators of Gene Expression.	German Conference on Bioinformatics	2004	DBLP BibTeX RDF
1	Alexander E. Kel, Yuri Tikunov, Nico Voss, Jürgen Borlak, Edgar Wingender	Application of Kernel Method to Reveal Subtypes of TF Binding Motifs.	Regulatory Genomics	2004	DBLP DOI BibTeX RDF
1	Ekaterina Shelest, Alexander E. Kel, Ellen Gößling, Edgar Wingender	Prediction of potential C/EBP/NF-kappaB composite elements using matrix-based search methods.	In Silico Biology	2003	DBLP BibTeX RDF
1	Olga V. Kel-Margoulis, Dmitri Tchekmenev, Alexander E. Kel, Ellen Gößling, Klaus Hornischer, Birgit Lewicki-Potapov, Edgar Wingender	Composition-sensitive analysis of the human genome for regulatory signals.	In Silico Biology	2003	DBLP BibTeX RDF
1	Alexander E. Kel, Ellen Gößling, Ingmar Reuter, Evgeny Cheremushkin, Olga V. Kel-Margoulis, Edgar Wingender	MATCHTM: a tool for searching transcription factor binding sites in DNA sequences.	Nucleic Acids Research	2003	DBLP DOI BibTeX RDF
1	V. Matys, Ellen Fricke, R. Geffers, Ellen Gößling, Martin Haubrock, R. Hehl, Klaus Hornischer, Dagmar Karas, Alexander E. Kel, Olga V. Kel-Margoulis, Dorothee-U. Kloos, Sigrid Land, Birgit Lewicki-Potapov, Holger Michael, Richard Münch, Ingmar Reuter, Stella Rotert, H. Saxel, Maurice Scheer, S. Thiele, Edgar Wingender	TRANSFAC®: transcriptional regulation, from patterns to profiles.	Nucleic Acids Research	2003	DBLP DOI BibTeX RDF
1	Evgeny Cheremushkin, Alexander E. Kel	Whole Genome Human/Mouse Phylogenetic Footprinting of Potential Transcription Regulatory Signals.	Pacific Symposium on Biocomputing	2003	DBLP BibTeX RDF
1	Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel	Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules.	German Conference on Bioinformatics	2003	DBLP BibTeX RDF
1	Alexander E. Kel, Yuri Tikunov, Nico Voss, Edgar Wingender	Recognition of multiple patterns in unaligned sets of sequences. Comparison of kernel clustering method with other methods.	German Conference on Bioinformatics	2003	DBLP BibTeX RDF
1	Olga V. Kel-Margoulis, Alexander E. Kel, Ingmar Reuter, Igor Deineko, Edgar Wingender	TRANSCompel®: a database on composite regulatory elements in eukaryotic genes.	Nucleic Acids Research	2002	DBLP DOI BibTeX RDF
1	Olga V. Kel-Margoulis, T. G. Ivanova, Edgar Wingender, Alexander E. Kel	Automatic Annotation of Genomic Regulatory Sequences by Searching for Composite Clusters.	Pacific Symposium on Biocomputing	2002	DBLP BibTeX RDF
1	Olga V. Kel-Margoulis, Igor Deineko, Ingmar Reuter, Edgar Wingender, Alexander E. Kel	TRANSCompel® - a professional database on composite regulatory elements in eukaryotic genes.	German Conference on Bioinformatics	2001	DBLP BibTeX RDF
1	Alexander E. Kel, Olga V. Kel-Margoulis, T. G. Ivanova, Edgar Wingender	ClusterScan: A Tool for Automatic Annotation of Genomic Regulatory Sequences by Searching for Composite Clusters.	German Conference on Bioinformatics	2001	DBLP BibTeX RDF
1	Ellen Gößling, Olga V. Kel-Margoulis, Alexander E. Kel, Edgar Wingender	MATCHTM - a tool for searching transcription factor binding sites in DNA sequences. Application for the analysis of human chromosomes.	German Conference on Bioinformatics	2001	DBLP BibTeX RDF
1	Olga V. Kel-Margoulis, Aida G. Romashchenko, Nikolay A. Kolchanov, Edgar Wingender, Alexander E. Kel	COMPEL: a database on composite regulatory elements providing combinatorial transcriptional regulation.	Nucleic Acids Research	2000	DBLP DOI BibTeX RDF
1	Nikolay A. Kolchanov, Olga A. Podkolodnaya, Elena A. Ananko, Elena V. Ignatieva, Irina L. Stepanenko, Olga V. Kel-Margoulis, Alexander E. Kel, Tatyana I. Merkulova, T. N. Goryachkovskaya, T. V. Busygina, F. A. Kolpakov, Nikolay L. Podkolodny, Andrey N. Naumochkin, I. M. Korostishevskaya, Aida G. Romashchenko, G. Christian Overton	Transcription Regulatory Regions Database (TRRD): its status in 2000.	Nucleic Acids Research	2000	DBLP DOI BibTeX RDF
1	Yuri Tikunov, Alexander E. Kel	Kernel Method for Estimation of Functional Site Local Consensi: Classification of Transcription Initiation Sites in Eukaryotic Genes.	German Conference on Bioinformatics	2000	DBLP BibTeX RDF
1	Alexander E. Kel, Igor Deineko, Olga V. Kel-Margoulis, Edgar Wingender, Vadim Ratner	Modeling of Gene Regulatory Network of Cell Cycle Control. Role of E2F Feedback Loops.	German Conference on Bioinformatics	2000	DBLP BibTeX RDF
1	T. Heinemeyer, Xin Chen, Holger Karas, Alexander E. Kel, Olga V. Kel-Margoulis, Ines Liebich, T. Meinhardt, Ingmar Reuter, Frank Schacherer, Edgar Wingender	Expanding the TRANSFAC database towards an expert system of regulatory molecular mechanisms.	Nucleic Acids Research	1999	DBLP DOI BibTeX RDF
1	Nikolay A. Kolchanov, Elena A. Ananko, Olga A. Podkolodnaya, Elena V. Ignatieva, Irina L. Stepanenko, Olga V. Kel-Margoulis, Alexander E. Kel, Tatyana I. Merkulova, T. N. Goryachkovskaya, T. V. Busygina, F. A. Kolpakov, Nikolay L. Podkolodny, Andrey N. Naumochkin, Aida G. Romashchenko	Transcription Regulatory Regions Database (TRRD): its status in 1999.	Nucleic Acids Research	1999	DBLP DOI BibTeX RDF
1	Alexander E. Kel, Olga V. Kel-Margoulis, Edgar Wingender	E2F composite units in promoters of cell cycle genes.	German Conference on Bioinformatics	1999	DBLP BibTeX RDF
1	Alexander E. Kel, Andrey A. Ptitsyn, Vladimir N. Babenko, Sebastian Meier-Ewert, Hans Lehrach	A genetic algorithm for designing gene family-specific oligonucleotide sets used for hybridization: the G protein-coupled receptor protein superfamily.	Bioinformatics	1998	DBLP DOI BibTeX RDF
1	T. Heinemeyer, Edgar Wingender, Ingmar Reuter, Henning Hermjakob, Alexander E. Kel, Olga V. Kel-Margoulis, Elena V. Ignatieva, Elena A. Ananko, Olga A. Podkolodnaya, F. A. Kolpakov, Nikolay L. Podkolodny, Nikolay A. Kolchanov	Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL.	Nucleic Acids Research	1998	DBLP DOI BibTeX RDF
1	Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Alexander E. Kel, Y. V. Kondrakhin, Anatoly S. Frolov, F. A. Kolpakov, T. N. Goryachkovskaya, O. V. Kel, Elena A. Ananko, Elena V. Ignatieva, Olga A. Podkolodnaya, Vladimir N. Babenko, Irina L. Stepanenko, Aida G. Romashchenko, Tatyana I. Merkulova, Denis G. Vorobiev, Sergey V. Lavryushev, Y. V. Ponomarenko, Alexey V. Kochetov, G. B. Kolesov, Victor V. Solovyev, Luciano Milanesi, Nikolay L. Podkolodny, Edgar Wingender, T. Heinemeyer	GenExpress: A Computer System for Description, Analysis and Recognition of Regulatory Sequences in Eukaryotic Genome.	ISMB	1998	DBLP BibTeX RDF
1	Edgar Wingender, Xin Chen, T. Heinemeyer, Alexander E. Kel, Ines Liebich, T. Meinhardt	A hierarchy of databases for modeling gene regulatory mechanisms.	German Conference on Bioinformatics	1998	DBLP BibTeX RDF
1	Alexander E. Kel, Olga V. Kel-Margoulis, Vladimir N. Babenko, Nikolay A. Kolchanov, Edgar Wingender	Combinatorial identification of promoters induced upon immune cell activation.	German Conference on Bioinformatics	1998	DBLP BibTeX RDF
1	Edgar Wingender, Alexander E. Kel, Olga V. Kel-Margoulis, Holger Karas, T. Heinemeyer, P. Dietze, R. Knüppel, Aida G. Romashchenko, Nikolay A. Kolchanov	TRANSFAC, TRRD and COMPEL: towards a federated database system on transcriptional regulation.	Nucleic Acids Research	1997	DBLP DOI BibTeX RDF
1	Alexander E. Kel, Andrey A. Ptitsyn, Vladimir N. Babenko, Sebastian Meier-Ewert, Hans Lehrach	A genetic algorithm for designing gene family specific oligonucleotide sets used for hybridization. The G Protein-coupled receptor Protein superfamily..	German Conference on Bioinformatics	1997	DBLP BibTeX RDF
1	Elena V. Ignatieva, Alexander E. Kel, Nikolay A. Kolchanov	Lipid Metabolism Transcription Regulatory Regions Database (LM-TRRD).	German Conference on Bioinformatics	1997	DBLP BibTeX RDF
1	Mikhail P. Ponomarenko, Julia V. Ponomarenko, Alexander E. Kel, Nikolay A. Kolchanov, N. Karas, Edgar Wingender, Heinz Sklenar	Identification of the significant conformational features of functional sites in B-DNA.	German Conference on Bioinformatics	1997	DBLP BibTeX RDF
1	I. V. Ischenko, Alexey V. Kochetov, Alexander E. Kel, Nikolay A. Kolchanov, L. L. Kisselev	Comparative Analysis of the Secondary Structure of mRNA Encoded by High- and Low-Expression Eukaryotic Genes.	German Conference on Bioinformatics	1996	DBLP BibTeX RDF
1	Alexander E. Kel, M. Philipenko, Vladimir N. Babenko, Nikolay A. Kolchanov	Genetic Algorithm for Selection of Oligonucleotides for Identification by Hybridisation of Genomic DNA Fragments Possessing Gene Potential.	German Conference on Bioinformatics	1996	DBLP BibTeX RDF
1	Elena A. Ananko, Elena V. Ignatieva, Alexander E. Kel, Nikolay A. Kolchanov	WWWTRRD: Hypertext Information System an Transcription Regulation.	German Conference on Bioinformatics	1996	DBLP BibTeX RDF
1	Alexander E. Kel, O. V. Kel, Oleg V. Vishnevsky, Mikhail P. Ponomarenko, I. V. Ischenko, Holger Karas, Edgar Wingender, Nikolay A. Kolchanov, Heinz Sklenar	TRRD and COMPEL Databases on Transcription Linked to TRANSFAC as Tools for Analysis and Recognition of Regulatory Sequences.	German Conference on Bioinformatics - Selected Papers	1996	DBLP DOI BibTeX RDF
1	Y. V. Kondrakhin, F. A. Kolpakov, Alexander E. Kel, Nikolay A. Kolchanov, Luciano Milanesi	Computer Analysis and Recognition of the Transcription Regulatory Elements in Eukaryotic Genomes.	German Conference on Bioinformatics	1996	DBLP BibTeX RDF
1	Alexander E. Kel, O. V. Kel, I. V. Ischenko, Nikolay A. Kolchanov, Holger Karas, Edgar Wingender, Heinz Sklenar	TRRD and COMPEL Databases an Transcription Linked to TRANSFAC as Tools for Analysis and Recognition of Regulatory Sequences.	German Conference on Bioinformatics	1996	DBLP BibTeX RDF
1	Y. V. Kondrakhin, Alexander E. Kel, Nikolay A. Kolchanov, Aida G. Romashchenko, Luciano Milanesi	Eukaryotic promoter recognition by binding sites for transcription factors.	Computer Applications in the Biosciences	1995	DBLP DOI BibTeX RDF
1	O. V. Kel, A. G. Romachenko, Alexander E. Kel, Andrey N. Naumochkin, Nikolay A. Kolchanov	Data representation in the TRRD-a database of transcription regulatory regions of the eukaryotic genomes.	HICSS	1995	DBLP DOI BibTeX RDF	TRRD, transcription regulatory regions, eukaryotic genomes, TRRD database, structural functional organization, protein factors, transcription signals, eukaryotic genome, EMBL, EPD, TFD, TRANSFAC, human glycoprotein hormone gene, database, data structures, database management systems, medical information systems, genetics, biology computing, data representation, transcription regulation
1	Nikolay A. Kolchanov, Oleg V. Vishnevsky, Vladimir N. Babenko, Alexander E. Kel, Ilya N. Shindyalov	Identification of CDNA Sequences by Specific Oligonucleotide Sets - A Computer Tool and Application.	ISMB	1995	DBLP BibTeX RDF
1	Alexander E. Kel, Y. V. Kondrakhin, Ph. A. Kolpakov, O. V. Kel, Aida G. Romashchenko, Edgar Wingender, Luciano Milanesi, Nikolay A. Kolchanov	Computer Tool FUNSITE for Analysis of Eukaryotic Regulatory Genomic Sequences.	ISMB	1995	DBLP BibTeX RDF
1	Alexander E. Kel, Mikhail P. Ponomarenko, E. A. Likhachev, Yuri L. Orlov, I. V. Ischenko, Luciano Milanesi, Nikolay A. Kolchanov	SITEVIDEO: a computer system for functional site analysis and recognition. Investigation of the human splice sites.	Computer Applications in the Biosciences	1993	DBLP DOI BibTeX RDF

Publications of "Alexander E. Kel" ( http://dblp.L3S.de/Authors/Alexander_E._Kel )