| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Kyle E. Roberts, Patrick R. Cushing, Prisca Boisguerin, Dean R. Madden, Bruce Randall Donald |
Computational Design of a PDZ Domain Peptide Inhibitor that Rescues CFTR Activity.  |
PLoS Computational Biology  |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | Pablo Gainza, Kyle E. Roberts, Bruce Randall Donald |
Protein Design Using Continuous Rotamers. |
PLoS Computational Biology |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald |
The Compass That Steered Robotics. |
Logic and Program Semantics |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | Mehmet Serkan Apaydin, Bülent Çatay, Nicholas Patrick, Bruce Randall Donald |
NVR-BIP: Nuclear Vector Replacement using Binary Integer Programming for NMR Structure-Based Assignments. |
Comput. J. |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Jianyang Zeng, Kyle E. Roberts, Pei Zhou, Bruce Randall Donald |
A Bayesian Approach for Determining Protein Side-Chain Rotamer Conformations Using Unassigned NOE Data. |
RECOMB |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Chittaranjan Tripathy, Jianyang Zeng, Pei Zhou, Bruce Randall Donald |
Protein Loop Closure Using Orientational Restraints from NMR Data. |
RECOMB |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Jeffrey W. Martin, Anthony K. Yan, Chris Bailey-Kellogg, Pei Zhou, Bruce Randall Donald |
A Geometric Arrangement Algorithm for Structure Determination of Symmetric Protein Homo-oligomers from NOEs and RDCs. |
RECOMB |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Kyle E. Roberts, Patrick R. Cushing, Prisca Boisguerin, Dean R. Madden, Bruce Randall Donald |
Design of Protein-Protein Interactions with a Novel Ensemble-Based Scoring Algorithm. |
RECOMB |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Anna Yershova, Chittaranjan Tripathy, Pei Zhou, Bruce Randall Donald |
Algorithms and Analytic Solutions Using Sparse Residual Dipolar Couplings for High-Resolution Automated Protein Backbone Structure Determination by NMR. |
WAFR |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Jianyang Zeng, Pei Zhou, Bruce Randall Donald |
A Markov Random Field Framework for Protein Side-Chain Resonance Assignment. |
RECOMB |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Mehmet Çagri Çalpur, Hakan Erdogan, Bülent Çatay, Bruce Randall Donald, Mehmet Serkan Apaydin |
Developing a Scoring Function for NMR Structure-based Assignments using Machine Learning. |
ISCIS |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Mehmet Serkan Apaydin, Bülent Çatay, Nicholas Patrick, Bruce Randall Donald |
NVR-BIP: Nuclear vector replacement using binary integer programming for NMR structure-based assignments. |
ISCIS |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald |
The minimized dead-end elimination criterion and its application to protein redesign in a hybrid scoring and search algorithm for computing partition functions over molecular ensembles. |
Journal of Computational Chemistry |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Christopher G. Levey, Igor Paprotny, Daniela Rus |
Simultaneous Control of Multiple MEMS Microrobots. |
WAFR |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivelin Georgiev, Daniel Keedy, Jane S. Richardson, David C. Richardson, Bruce Randall Donald |
Algorithm for backrub motions in protein design. |
ISMB |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivelin Georgiev, Bruce Randall Donald |
Dead-End Elimination with Backbone Flexibility. |
ISMB/ECCB (Supplement of Bioinformatics) |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Lincong Wang, Ramgopal R. Mettu, Bruce Randall Donald |
A Polynomial-Time Algorithm for De Novo Protein Backbone Structure Determination from Nuclear Magnetic Resonance Data. |
Journal of Computational Biology |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Shobha Potluri, Anthony K. Yan, James J. Chou, Bruce Randall Donald, Chris Bailey-Kellogg |
Extended Abstract: Structure Determination of Symmetric Protein Complexes by a Complete Search of Symmetry Configuration Space Using NMR Distance Restraints. |
WAFR |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald |
Improved Pruning algorithms and Divide-and-Conquer strategies for Dead-End Elimination, with application to protein design. |
ISMB (Supplement of Bioinformatics) |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald |
A Novel Minimized Dead-End Elimination Criterion and Its Application to Protein Redesign in a Hybrid Scoring and Search Algorithm for Computing Partition Functions over Molecular Ensembles. |
RECOMB |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Anthony K. Yan, Christopher James Langmead, Bruce Randall Donald |
A Probability-Based Similarity Measure for Saupe Alignment Tensors with Applications to Residual Dipolar Couplings in NMR Structural Biology. |
I. J. Robotic Res. |
2005 |
DBLP BibTeX RDF |
|
| 1 | Ryan H. Lilien, Brian W. Stevens, Amy C. Anderson, Bruce Randall Donald |
A Novel Ensemble-Based Scoring and Search Algorithm for Protein Redesign and Its Application to Modify the Substrate Specificity of the Gramicidin Synthetase A Phenylalanine Adenylation Enzyme. |
Journal of Computational Biology |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Christopher G. Levey, Craig D. McGray, Igor Paprotny, Daniela Rus |
A Steerable, Untethered, 250 × 60µm MEMS Mobile Micro-Robot. |
ISRR |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Lincong Wang, Bruce Randall Donald |
An Efficient and Accurate Algorithm for Assigning Nuclear Overhauser Effect Restraints Using a Rotamer Library Ensemble and Residual Dipolar Couplings. |
CSB |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Lincong Wang, Ramgopal R. Mettu, Bruce Randall Donald |
An Algebraic Geometry Approach to Protein Structure Determination from NMR Data. |
CSB |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald |
Computational and physical modeling challenges in structural molecular biology and proteomics. |
Symposium on Solid and Physical Modeling |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Ramgopal R. Mettu, Ryan H. Lilien, Bruce Randall Donald |
High-throughput inference of protein-protein interfaces from unassigned NMR data. |
ISMB (Supplement of Bioinformatics) |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher James Langmead, Anthony K. Yan, Ryan H. Lilien, Lincong Wang, Bruce Randall Donald |
A Polynomial-Time Nuclear Vector Replacement Algorithm for Automated NMR Resonance Assignments. |
Journal of Computational Biology |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Lincong Wang, Bruce Randall Donald |
Analysis of a Systematic Search-Based Algorithm for Determining Protein Backbone Structure from a Minimum Number of Residual Dipolar Couplings. |
CSB |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher James Langmead, Bruce Randall Donald |
High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment. |
CSB |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Ryan H. Lilien, Brian W. Stevens, Amy C. Anderson, Bruce Randall Donald |
A novel ensemble-based scoring and search algorithm for protein redesign, and its application to modify the substrate specificity of the gramicidin synthetase a phenylalanine adenylation enzyme. |
RECOMB |
2004 |
DBLP DOI BibTeX RDF |
enzyme design, fluorescence binding assay, molecular ensemble, non-ribosomal peptide synthetase, protein flexibility, protein-ligand binding, protein design |
| 1 | Ryan H. Lilien, Hany Farid, Bruce Randall Donald |
Probabilistic Disease Classification of Expression-Dependent Proteomic Data from Mass Spectrometry of Human Serum. |
Journal of Computational Biology |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher James Langmead, Anthony K. Yan, C. Robertson McClung, Bruce Randall Donald |
Phase-Independent Rhythmic Analysis of Genome-Wide Expression Patterns. |
Journal of Computational Biology |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Christopher G. Levey, Craig D. McGray, Daniela Rus, Mike Sinclair |
UntetheredMicro-Actuators for Autonomous Micro-robot Locomotion: Design, Fabrication, Control, and Performance. |
ISRR |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher James Langmead, Bruce Randall Donald |
3D Structural Homology Detection via Unassigned Residual Dipolar Couplings. |
CSB |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Lincong Wang, Ramgopal R. Mettu, Ryan H. Lilien, Bruce Randall Donald |
An Exact Algorithm For Determining Protein Backbone Structure From NH Residual Dipolar Couplings. (PDF / PS) |
CSB |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher James Langmead, Anthony K. Yan, Ryan H. Lilien, Lincong Wang, Bruce Randall Donald |
Large a polynomial-time nuclear vector replacement algorithm for automated NMR resonance assignments. |
RECOMB |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Kevin M. Lynch, Daniela Rus |
Guest Editors' Introduction to the Special Issue on Algorithmic Foundations of Robotics. |
I. J. Robotic Res. |
2002 |
DBLP BibTeX RDF |
|
| 1 | Christopher James Langmead, C. Robertson McClung, Bruce Randall Donald |
A Maximum Entropy Algorithm for Rhythmic Analysis of Genome-Wide Expression Patterns. |
CSB |
2002 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher James Langmead, Anthony K. Yan, C. Robertson McClung, Bruce Randall Donald |
Phase-independent rhythmic analysis of genome-wide expression patterns. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher Bailey-Kellogg, John J. Kelley, Clifford Stein, Bruce Randall Donald |
Reducing Mass Degeneracy in SAR by MS by Stable Isotopic Labeling. |
Journal of Computational Biology |
2001 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald, Christopher Bailey-Kellogg, Jack Kelley, Ryan H. Lilien |
Physical Geometric Algorithms for Structural Molecular Biology. |
ICRA |
2001 |
DBLP BibTeX RDF |
|
| 1 | Christopher James Langmead, Bruce Randall Donald |
Extracting structural information using time-frequency analysis of protein NMR data. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
| 1 | Amy J. Briggs, Bruce Randall Donald |
Visibility-Based Planning of Sensor Control Strategies. |
Algorithmica |
2000 |
DBLP DOI BibTeX RDF |
Visibility-based planning, Error detection and recovery, Sensor configuration, Surveillance, Camera control |
| 1 | R. G. Brown, Bruce Randall Donald |
Mobile Robot Self-Localization without Explicit Landmarks. |
Algorithmica |
2000 |
DBLP DOI BibTeX RDF |
Rasterized algorithms, Navigation, Localization, Mobile robots |
| 1 | Karl-Friedrich Böhringer, Vivek Bhatt, Bruce Randall Donald, Kenneth Y. Goldberg |
Algorithms for Sensorless Manipulation Using a Vibrating Surface. |
Algorithmica |
2000 |
DBLP DOI BibTeX RDF |
Vibratory parts feeders, Sensorless manipulation, Nonprehensile manipulation, Programmable force fields, Open-loop positioning and orienting, Industrial parts feeding |
| 1 | Karl-Friedrich Böhringer, Bruce Randall Donald, Lydia E. Kavraki, Florent Lamiraux |
Part orientation with one or two stable equilibria using programmable force fields. |
IEEE Transactions on Robotics |
2000 |
DBLP DOI BibTeX RDF |
|
| 1 | Tom Ngo, Doug Cutrell, Jenny Dana, Bruce Randall Donald, Lorie Loeb, Shunhui Zhu |
Accessible animation and customizable graphics via simplicial configuration modeling. |
SIGGRAPH |
2000 |
DBLP DOI BibTeX RDF |
geometric modeling, animation with constraints, WWW applications, weird math |
| 1 | Jon Howell, Bruce Randall Donald |
Practical Mobile Robot Self-Localization. |
ICRA |
2000 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald, Frederick Henle |
Using Haptic Vector Fields for Animation Motion Control. |
ICRA |
2000 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald, Larry Gariepy, Daniela Rus |
Distributed Manipulation of Multiple Objects using Ropes. |
ICRA |
2000 |
DBLP BibTeX RDF |
|
| 1 | John W. Suh, R. Bruce Darling, Karl-Friedrich Böhringer, Bruce Randall Donald, Henry Baltes, Gregory T. A. Kovacs |
Fully Programmable MEMS Ciliary Actuator Arrays for Micromanipulation Tasks. |
ICRA |
2000 |
DBLP BibTeX RDF |
|
| 1 | Christopher Bailey-Kellogg, John J. Kelley, Clifford Stein, Bruce Randall Donald |
Reducing Mass Degeneracy in SAR by MS by Stable Isotopic Labeling. |
ISMB |
2000 |
DBLP BibTeX RDF |
|
| 1 | Christopher Bailey-Kellogg, Alik Widge, John J. Kelley, Marcelo J. Berardi, John H. Bushweller, Bruce Randall Donald |
The NOESY jigsaw: automated protein secondary structure and main-chain assignment from sparse, unassigned NMR data. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
| 1 | Karl-Friedrich Böhringer, Bruce Randall Donald, Noel C. MacDonald |
Programmable Force Fields for Distributed Manipulation, with Applications to MEMS Actuator Arrays and Vibratory Parts Feeders. |
I. J. Robotic Res. |
1999 |
DBLP BibTeX RDF |
|
| 1 | Karl-Friedrich Böhringer, Bruce Randall Donald, Dan Halperin |
On the Area Bisectors of a Polygon. |
Discrete & Computational Geometry |
1999 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Larry Gariepy, Daniela Rus |
Experiments in Constrained Prehensile Manipulation: Distributed Manipulation with Ropes. |
ISER |
1999 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald, James Jennings, Daniela Rus |
Minimalism Distribution Supermodularity. |
J. Exp. Theor. Artif. Intell. |
1997 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, James Jennings, Daniela Rus |
Information Invariants for Distributed Manipulation. |
I. J. Robotic Res. |
1997 |
DBLP BibTeX RDF |
|
| 1 | Karl-Friedrich Böhringer, Bruce Randall Donald, Dan Halperin |
The Area Bisectors of a Polygon and Force Equilibria in Programmable Vector Fields. |
Symposium on Computational Geometry |
1997 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Patrick G. Xavier |
Provably Good Approximation Algorithms for Optimal Kinodynamic Planning: Robots with Decoupled Dynamics Bounds. |
Algorithmica |
1995 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Patrick G. Xavier |
Provably Good Approximation Algorithms for Optimal Kinodynamic Planning for Cartesian Robots and Open-Chain Manipulators. |
Algorithmica |
1995 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald |
On Information Invariants in Robotics. |
Artif. Intell. |
1995 |
DBLP DOI BibTeX RDF |
|
| 1 | Karl-Friedrich Böhringer, Russell Brown, Bruce Randall Donald, James Jennings, Daniela Rus |
Distributed Robotic Manipulation: Experiments in Minimalism. |
ISER |
1995 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald, James Jennings, Daniela Rus |
Analyzing Teams of Cooperating Mobile Robots. |
ICRA |
1994 |
DBLP BibTeX RDF |
|
| 1 | Karl-Friedrich Böhringer, Bruce Randall Donald, Robert Mihailovich, Noel C. MacDonald |
Sensorless Manipulation Using Massively Parallel Microfabricated Actuator Arrays. |
ICRA |
1994 |
DBLP BibTeX RDF |
|
| 1 | Amy J. Briggs, Bruce Randall Donald |
Automatic Sensor Configuration for Task-Directed Planning. |
ICRA |
1994 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald |
Special Issue on Computational Robotics: The Geometric Theory of Manipulation, Planning, and Control. |
Algorithmica |
1993 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Patrick G. Xavier, John F. Canny, John H. Reif |
Kinodynamic Motion Planning. |
J. ACM |
1993 |
DBLP DOI BibTeX RDF |
robotics, computational geometry, approximation, dynamics, shortest path, optimal control |
| 1 | Bruce Randall Donald |
Information Invariants in Robotics: Part I - State, Communication, and Side-Effects. |
ICRA |
1993 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald |
Information Invariants in Robotics: Part II - Sensors and Computation. |
ICRA |
1993 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald, James Jennings, Russell Brown |
Constructive recognizability for task-directed robot programming. |
Robotics and Autonomous Systems |
1992 |
DBLP DOI BibTeX RDF |
|
| 1 | John F. Canny, Bruce Randall Donald, Eugene K. Ressler |
A Rational Rotation Method for Robust Geometric Algorithms. |
Symposium on Computational Geometry |
1992 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Davied Renpan Chang |
On the Complexity of Computing the Homology Type of a Triangulation |
FOCS |
1991 |
DBLP DOI BibTeX RDF |
homology triangulation, quadratic expected running time, linear expected running time, finite simplicial complex, integer coefficients, Bezier-spline surfaces, topological type, sparseness measure, computer-aided design, probabilistic analysis, simplices, homology groups, worst-case bounds, finite-element meshes, geometric complexity |
| 1 | Bruce Randall Donald |
Planning Multi-Step Error Detection and Recovery Strategies. |
I. J. Robotic Res. |
1990 |
DBLP BibTeX RDF |
|
| 1 | Bruce Randall Donald |
The Complexity of Planar Compliant Motion Planning Under Uncertainty. |
Algorithmica |
1990 |
DBLP DOI BibTeX RDF |
|
| 1 | Jed Lengyel, Mark Reichert, Bruce Randall Donald, Donald P. Greenberg |
Real-time robot motion planning using rasterizing computer graphics hardware. |
SIGGRAPH |
1990 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald, Patrick G. Xavier |
Provably Good Approximation Algorithms for Optimal Kinodynamic Planning for Cartesian Robots and Open Chain Manipulators. |
Symposium on Computational Geometry |
1990 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald |
Error Detection and Recovery in Robotics |
|
1989 |
DOI RDF |
|
| 1 | John F. Canny, Bruce Randall Donald |
Simplified Voronoi Diagrams. |
Discrete & Computational Geometry |
1988 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald |
A Geometric Approach to Error Detection and Recovery for Robot Motion Planning with Uncertainty. |
Artif. Intell. |
1988 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruce Randall Donald |
The Complexity of Planar Compliant Motion Planning Under Uncertainty. |
Symposium on Computational Geometry |
1988 |
DBLP DOI BibTeX RDF |
|
| 1 | John F. Canny, Bruce Randall Donald, John H. Reif, Patrick G. Xavier |
On the Complexity of Kinodynamic Planning |
FOCS |
1988 |
DBLP DOI BibTeX RDF |
kinodynamic planning, minimal-time trajectory, approximation algorithm, robot system, dynamic constraints |
| 1 | Bruce Randall Donald |
A Search Algorithm for Motion Planning with Six Degrees of Freedom. |
Artif. Intell. |
1987 |
DBLP DOI BibTeX RDF |
|
| 1 | John F. Canny, Bruce Randall Donald |
Simplified Voronoi Diagrams. |
Symposium on Computational Geometry |
1987 |
DBLP DOI BibTeX RDF |
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