Search results for "Functional genomics"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
3	Min-Ling Zhang, Zhi-Hua Zhou	Multilabel Neural Networks with Applications to Functional Genomics and Text Categorization.	IEEE Trans. Knowl. Data Eng.	2006	DBLP DOI BibTeX RDF	multilabel learning, data mining, neural networks, Machine learning, text categorization, backpropagation, functional genomics
2	Rafal Grodzicki, Jacek Mandziuk, Lipo Wang	Improved Multilabel Classification with Neural Networks.	PPSN	2008	DBLP DOI BibTeX RDF	neural network, bioinformatics, backpropagation, learning system, functional genomics, multilabel
2	Celine Vens, Jan Struyf, Leander Schietgat, Saso Dzeroski, Hendrik Blockeel	Decision trees for hierarchical multi-label classification.	Machine Learning	2008	DBLP DOI BibTeX RDF	Precision-recall analysis, Decision trees, Hierarchical classification, Multi-label classification, Functional genomics
2	Ross D. King, Andreas Karwath, Amanda Clare, Luc Dehaspe	Logic and the Automatic Acquisition of Scientific Knowledge: An Application to Functional Genomics.	Computational Discovery of Scientific Knowledge	2007	DBLP DOI BibTeX RDF
2	Leonardo Bobadilla, Fernando Niño, Edilberto Cepeda, Manuel A. Patarroyo	A Novel Methodology for Characterizing and Predicting Protein Functional Sites.	BIBM	2007	DBLP DOI BibTeX RDF	Protein functional sites, Metal- binding sites, Java source code available upon request, Supplementary Website: http://dis.unal.edu.co/~biocomp/metals/, Clustering, Classification, Feature Extraction, Functional Genomics
2	Hendrik Blockeel, Leander Schietgat, Jan Struyf, Saso Dzeroski, Amanda Clare	Decision Trees for Hierarchical Multilabel Classification: A Case Study in Functional Genomics.	PKDD	2006	DBLP DOI BibTeX RDF
2	Silvano Paoli, Giuseppe Jurman, Davide Albanese, Stefano Merler, Cesare Furlanello	Semisupervised Profiling of Gene Expressions and Clinical Data.	WILF	2005	DBLP DOI BibTeX RDF	semisupervised classification, Support Vector Machines, feature selection, statistical learning, DNA microarray, functional genomics
2	Francisco Azuaje, Olivier Bodenreider	Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study.	BIBE	2004	DBLP DOI BibTeX RDF
2	Richard O. Sinnott, Micha Bayer, Derek Houghton, David Berry, Magnus Ferrier	Development of a Grid Infrastructure for Functional Genomics.	LSGRID	2004	DBLP DOI BibTeX RDF
2	Ela Hunt, Evangelos Pafilis, Inga Tulloch, John Wilson	Index-Driven XML Data Integration to Support Functional Genomics.	DILS	2004	DBLP DOI BibTeX RDF
2	Tom Van Court, Martin C. Herbordt, Richard J. Barton	Case Study of a Functional Genomics Application.	FPL	2003	DBLP DOI BibTeX RDF
2	Magali Roux-Rouquié, Leroy E. Hood, Sandrine Imbeaud, Charles Auffray	Issues in Computational Methods for Functional Genomics and Systems Biology.	CMSB	2003	DBLP DOI BibTeX RDF
1	Misha Kapushesky, Tomasz Adamusiak, Tony Burdett, Aedín C. Culhane, Anna Farne, Alexey Filippov, Ele Holloway, Andrey Klebanov, Nataliya Kryvych, Natalja Kurbatova, Pavel Kurnosov, James Malone, Olga Melnichuk, Robert Petryszak, Nikolay Pultsin, Gabriella Rustici, Andrew Tikhonov, Ravensara S. Travillian, Eleanor Williams, Andrey Zorin, Helen E. Parkinson, Alvis Brazma	Gene Expression Atlas update - a value-added database of microarray and sequencing-based functional genomics experiments.	Nucleic Acids Research	2012	DBLP DOI BibTeX RDF
1	Jason E. Stajich, Todd Harris, Brian P. Brunk, John Brestelli, Steve Fischer, Omar S. Harb, Jessica C. Kissinger, Wei Li, Vishal Nayak, Deborah F. Pinney, Christian J. Stoeckert Jr., David S. Roos	FungiDB: an integrated functional genomics database for fungi.	Nucleic Acids Research	2012	DBLP DOI BibTeX RDF
1	Erich J. Baker, Jeremy J. Jay, Jason A. Bubier, Michael A. Langston, Elissa J. Chesler	GeneWeaver: a web-based system for integrative functional genomics.	Nucleic Acids Research	2012	DBLP DOI BibTeX RDF
1	Yuichi Kodama, Jun Mashima, Eli Kaminuma, Takashi Gojobori, Osamu Ogasawara, Toshihisa Takagi, Kousaku Okubo, Yasukazu Nakamura	The DNA Data Bank of Japan launches a new resource, the DDBJ Omics Archive of functional genomics experiments.	Nucleic Acids Research	2012	DBLP DOI BibTeX RDF
1	Meng-Pin Weng, Ben-Yang Liao	DroPhEA: Drosophila phenotype enrichment analysis for insect functional genomics.	Bioinformatics	2011	DBLP DOI BibTeX RDF
1	Zhangjun Fei, Je-Gun Joung, Xuemei Tang, Yi Zheng, Mingyun Huang, Je Min Lee, Ryan McQuinn, Denise M. Tieman, Rob Alba, Harry J. Klee, James J. Giovannoni	Tomato Functional Genomics Database: a comprehensive resource and analysis package for tomato functional genomics.	Nucleic Acids Research	2011	DBLP DOI BibTeX RDF
1	Tanya Barrett, Dennis B. Troup, Stephen E. Wilhite, Pierre Ledoux, Carlos Evangelista, Irene F. Kim, Maxim Tomashevsky, Kimberly A. Marshall, Katherine H. Phillippy, Patti M. Sherman, Rolf N. Muertter, Michelle Holko, Oluwabukunmi Ayanbule, Andrey Yefanov, Alexandra Soboleva	NCBI GEO: archive for functional genomics data sets - 10 years on.	Nucleic Acids Research	2011	DBLP DOI BibTeX RDF
1	Mathieu Rouard, Valentin Guignon, Christelle Aluome, Marie-Angélique Laporte, Gaëtan Droc, Christian Walde, Christian M. Zmasek, Christophe Périn, Matthieu G. Conte	GreenPhylDB v2.0: comparative and functional genomics in plants.	Nucleic Acids Research	2011	DBLP DOI BibTeX RDF
1	Helen E. Parkinson, Ugis Sarkans, Nikolay Kolesnikov, Niran Abeygunawardena, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Ele Holloway, Natalja Kurbatova, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Gabriella Rustici, Anjan Sharma, Eleanor Williams, Tomasz Adamusiak, Marco Brandizi, Nataliya Sklyar, Alvis Brazma	ArrayExpress update - an archive of microarray and high-throughput sequencing-based functional genomics experiments.	Nucleic Acids Research	2011	DBLP DOI BibTeX RDF
1	Ming-Jen Fan, Su-May Yu, Tzu-Chieh Hung, Wei-Quan Chen, Yue-Ie Hsing, Hsin-Li Lin, Chia-Cheng Liu, Jing-Gung Chung, Jeffrey J. P. Tsai	TTRSIS: A Cloud Computing Platform for Rice Functional Genomics Research through a Reverse Genetics Approach.	BIBE	2011	DBLP DOI BibTeX RDF
1	Yogender Aggarwal, Bhuwan Mohan Karan, Barda Nand Das, Rakesh Kumar Sinha	Mechanistic electronic model to simulate and predict the effect of heat stress on the functional genomics of HO-1 system: Vasodilation.	Comp. in Bio. and Med.	2010	DBLP DOI BibTeX RDF
1	Benhui Chen, Weifeng Gu, Jinglu Hu	An improved multi-label classification method and its application to functional genomics.	I. J. Computational Biology and Drug Design	2010	DBLP DOI BibTeX RDF
1	Michael M. Hoffman, Orion J. Buske, William Stafford Noble	The Genomedata format for storing large-scale functional genomics data.	Bioinformatics	2010	DBLP DOI BibTeX RDF
1	Yuanfang Guan, Cheryl L. Ackert-Bicknell, Braden Kell, Olga G. Troyanskaya, Matthew A. Hibbs	Functional Genomics Complements Quantitative Genetics in Identifying Disease-Gene Associations.	PLoS Computational Biology	2010	DBLP DOI BibTeX RDF
1	Miriah D. Meyer, Bang Wong, Mark P. Styczynski, Tamara Munzner, Hanspeter Pfister	Pathline: A Tool For Comparative Functional Genomics.	Comput. Graph. Forum	2010	DBLP DOI BibTeX RDF
1	Paramvir S. Dehal, Marcin P. Joachimiak, Morgan N. Price, John T. Bates, Jason K. Baumohl, Dylan Chivian, Greg D. Friedland, Katherine H. Huang, Keith Keller, Pavel S. Novichkov, Inna Dubchak, Eric J. Alm, Adam P. Arkin	MicrobesOnline: an integrated portal for comparative and functional genomics.	Nucleic Acids Research	2010	DBLP DOI BibTeX RDF
1	Thomas Werner	Next generation sequencing in functional genomics.	Briefings in Bioinformatics	2010	DBLP DOI BibTeX RDF
1	Youlian Pan, Alain B. Tchagang, Hugo Bérubé, Sieu Phan, Heather Shearer, Ziying Liu, Pierre R. Fobert, Fazel Famili	Integrative Data Mining in Functional Genomics of Brassica napus and Arabidopsis thaliana.	IEA/AIE	2010	DBLP DOI BibTeX RDF
1	Joaquín Dopazo	Formulating and testing hypotheses in functional genomics.	Artificial Intelligence in Medicine	2009	DBLP DOI BibTeX RDF
1	Robert A. van den Berg, Iven Van Mechelen, Tom F. Wilderjans, Katrijn Van Deun, Henk A. L. Kiers, Age K. Smilde	Integrating functional genomics data using maximum likelihood based simultaneous component analysis.	BMC Bioinformatics	2009	DBLP DOI BibTeX RDF
1	Gaëtan Droc, Christophe Périn, Sébastien Fromentin, Pierre Larmande	OryGenesDB 2008 update: database interoperability for functional genomics of rice.	Nucleic Acids Research	2009	DBLP DOI BibTeX RDF
1	Helen E. Parkinson, Misha Kapushesky, Nikolay Kolesnikov, Gabriella Rustici, Mohammadreza Shojatalab, Niran Abeygunawardena, Hugo Berube, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Ele Holloway, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Tim F. Rayner, Faisal Ibne Rezwan, Anjan Sharma, Eleanor Williams, Xiangqun Zheng Bradley, Tomasz Adamusiak, Marco Brandizi, Tony Burdett, Richard Coulson, Maria Krestyaninova, Pavel Kurnosov, Eamonn Maguire, Sudeshna Guha Neogi, Philippe Rocca-Serra, Susanna-Assunta Sansone, Nataliya Sklyar, Mengyao Zhao, Ugis Sarkans, Alvis Brazma	ArrayExpress update - from an archive of functional genomics experiments to the atlas of gene expression.	Nucleic Acids Research	2009	DBLP DOI BibTeX RDF
1	Adam M. Deutschbauer, Lars M. Steinmetz	Functional Genomics for Characterization of Genome Sequences.	Encyclopedia of Complexity and Systems Science	2009	DBLP DOI BibTeX RDF
1	Victor Trevino, Emmanuel Martinez, Mario Alvarez	Swarm Intelligence Algorithm for Feature Selection from Large-Scale Functional Genomics Datasets.	BIOCOMP	2009	DBLP BibTeX RDF
1	Ross D. King, Jem J. Rowland, Wayne Aubrey, Maria Liakata, Magdalena Markham, Larisa N. Soldatova, Ken E. Whelan, Amanda Clare, Mike Young, Andrew Sparkes, Stephen G. Oliver, Pinar Pir	The Robot Scientist Adam.	IEEE Computer	2009	DBLP DOI BibTeX RDF	Robot scientists, Yeast functional genomics, Laboratory automation software, Artificial intelligence, Computer science, Adam
1	Xuequn Shang, Zhanhuai Li, Wei Li	Mining functional associated patterns from biological network data.	SAC	2009	DBLP DOI BibTeX RDF	association mining, weighted graphs, biological networks
1	K. R. Seeja, M. Afshar Alam, S. K. Jain	MotifMiner: A Table Driven Greedy Algorithm for DNA Motif Mining.	ICIC	2009	DBLP DOI BibTeX RDF	Regulatory motif, Greedy approach, Motif discovery, Information content
1	Curtis Huttenhower, Mark Schroeder, Maria D. Chikina, Olga G. Troyanskaya	The Sleipnir library for computational functional genomics.	Bioinformatics	2008	DBLP DOI BibTeX RDF
1	Guo-Zhang Wu, Qiu-Ming Shi, Ya Niu, Mei-Qing Xing, Hong-Wei Xue	Shanghai RAPESEED Database: a resource for functional genomics studies of seed development and fatty acid metabolism of Brassica.	Nucleic Acids Research	2008	DBLP DOI BibTeX RDF
1	Damian Smedley, Morris A. Swertz, Katy Wolstencroft, Glenn Proctor, Michael Zouberakis, Jonathan B. L. Bard, John M. Hancock, Paul N. Schofield	Solutions for data integration in functional genomics: a critical assessment and case study.	Briefings in Bioinformatics	2008	DBLP DOI BibTeX RDF
1	Ludwig Lausser, Malte Buchholz, Hans A. Kestler	Boosting Threshold Classifiers for High- Dimensional Data in Functional Genomics.	ANNPR	2008	DBLP DOI BibTeX RDF
1	Joanna Jakubowska, Ela Hunt, John McClure, Matthew Chalmers, Martin W. McBride, Anna F. Dominiczak	VisGenome and Ensembl: Usability of Integrated Genome Maps.	DILS	2008	DBLP DOI BibTeX RDF	visualisation of large data sets, genome maps, genome visualisation, QTL, comparative and functional genomics, user study
1	Hugo P. Bastos, Catia Pesquita, Daniel Faria, André O. Falcão	BOLOS: BLAST & Ontology Linked-hOmologue Stars.	SAC	2008	DBLP DOI BibTeX RDF	protein clustering, protein homologues, gene ontology
1	A. V. Anagnostopoulos, Judith A. Blake, Carol J. Bult, Martin Ringwald, Joel E. Richardson, James A. Kadin, Janan T. Eppig	Using bio-ontologies as data annotation, integration & analytical tools at the Mouse Genome Informatics resource.	BIBE	2008	DBLP DOI BibTeX RDF
1	C. Chandras, Tom Weaver, Michael Zouberakis, John M. Hancock, Paul N. Schofield, V. Aidinis	Digital preservation - financial sustainability of biological data and material resources.	BIBE	2008	DBLP DOI BibTeX RDF
1	John M. Hancock, Paul N. Schofield, C. Chandras, Michael Zouberakis, V. Aidinis, Damian Smedley, N. Rosenthal, Klaus Schughart	CASIMIR: Coordination and Sustainability of International Mouse Informatics Resources.	BIBE	2008	DBLP DOI BibTeX RDF
1	Morris A. Swertz, Damian Smedley, Katy Wolstencroft, Rudi Alberts, Michael Zouberakis, V. Aidinis, Klaus Schughart, Paul N. Schofield, Ritsert C. Jansen	Towards dynamic database infrastructures for mouse genetics.	BIBE	2008	DBLP DOI BibTeX RDF
1	Roberto Avogadri, Matteo Brioschi, Francesca Ruffino, Fulvia Ferrazzi, Alessandro Beghini, Giorgio Valentini	An Algorithm to Assess the Reliability of Hierarchical Clusters in Gene Expression Data.	KES	2008	DBLP DOI BibTeX RDF
1	José Augusto Amgarten Quitzau, Jens Stoye	Detecting Repeat Families in Incompletely Sequenced Genomes.	WABI	2008	DBLP DOI BibTeX RDF
1	Intikhab Alam, Mike Cornell, Darren M. Soanes, Cornelia Hedeler, Han Min Wong, Magnus Rattray, Simon J. Hubbard, Nicholas J. Talbot, Stephen G. Oliver, Norman W. Paton	A Methodology for Comparative Functional Genomics.	J. Integrative Bioinformatics	2007	DBLP DOI BibTeX RDF
1	Negar Memarian, Matthew Jessulat, Javad Alirezaie, Nadereh Mir-Rashed, Jianhua Xu, Mehri Zareie, Myron Smith, Ashkan Golshani	Colony size measurement of the yeast gene deletion strains for functional genomics.	BMC Bioinformatics	2007	DBLP DOI BibTeX RDF
1	Gilad Lerman, Joseph McQuown, Alexandre Blais, Brian D. Dynlacht, Guangliang Chen, Bud Mishra	Functional genomics via multiscale analysis: application to gene expression and ChIP-on-chip data.	Bioinformatics	2007	DBLP DOI BibTeX RDF
1	Kihoon Yoon, Stephen Kwek	A data reduction approach for resolving the imbalanced data issue in functional genomics.	Neural Computing and Applications	2007	DBLP DOI BibTeX RDF	Clustering, Neural network, Data reduction, Imbalanced data
1	Agatha Schlüter, Stéphane Fourcade, Enric Domènech-Estévez, Toni Gabaldón, Jaime Huerta-Cepas, Guillaume Berthommier, Raymond Ripp, Ronald J. A. Wanders, Olivier Poch, Aurora Pujol	PeroxisomeDB: a database for the peroxisomal proteome, functional genomics and disease.	Nucleic Acids Research	2007	DBLP DOI BibTeX RDF
1	Yu Rang Park, Hye Won Lee, Sung-Bum Cho, Ju Han Kim	Cancer Genomics Object Model: An Object Model for Multiple Functional Genomics Data for Cancer Research.	MedInfo	2007	DBLP DOI BibTeX RDF
1	Can Türker, Etzard Stolte, Dieter Joho, Ralph Schlapbach	B-Fabric: A Data and Application Integration Framework for Life Sciences Research.	DILS	2007	DBLP DOI BibTeX RDF
1	Richard O. Sinnott, Oluwafemi Ajayi, Jipu Jiang, Anthony Stell, John P. Watt	User-oriented Security Supporting Inter-disciplinary Life Science Research across the Grid.	New Generation Comput.	2007	DBLP DOI BibTeX RDF	Epidemiological Studies, Neurological Research, Security, Grids, Clinical Trials, Shibboleth
1	Rafal Kustra, Romy Shioda, Mu Zhu	A factor analysis model for functional genomics.	BMC Bioinformatics	2006	DBLP DOI BibTeX RDF
1	Irena Spasic, Warwick B. Dunn, Giles Velarde, Andy Tseng, Helen Jenkins, Nigel Hardy, Stephen G. Oliver, Douglas B. Kell	MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomics.	BMC Bioinformatics	2006	DBLP DOI BibTeX RDF
1	Cesare Furlanello, Stefano Merler, Giuseppe Jurman	Combining feature selection and DTW for time-varying functional genomics.	IEEE Transactions on Signal Processing	2006	DBLP DOI BibTeX RDF
1	Ulisses M. Braga-Neto, Ernesto T. A. Marques Jr.	From Functional Genomics to Functional Immunomics: New Challenges, Old Problems, Big Rewards.	PLoS Computational Biology	2006	DBLP DOI BibTeX RDF
1	Ying Shi, Ling Chen, Lance A. Liotta, Hong-Hui Wan, Griffin P. Rodgers	Glia Maturation Factor Gamma (GMFG): A Cytokine-Responsive Protein During Hematopoietic Lineage Development and Its Functional Genomics Analysis.	Genomics, Proteomics & Bioinformatics	2006	DBLP DOI BibTeX RDF
1	Kamal Gajendran, Michael D. Gonzales, Andrew D. Farmer, Eric Archuleta, Joe Win, Mark E. Waugh, Sophien Kamoun	Phytophthora functional genomics database (PFGD): functional genomics of phytophthora-plant interactions.	Nucleic Acids Research	2006	DBLP DOI BibTeX RDF
1	Guo-Hsing Lee, Nai-Yu Chuang, Wen-Dar Lin, Chung-Der Hsiao, Hahn-Ming Lee, Jan-Ming Ho	E2D: A Novel Tool for Annotating Protein Domains in Expressed Sequence Tags.	CIBCB	2006	DBLP DOI BibTeX RDF
1	Richard O. Sinnott, Micha Bayer, A. J. Stell, Jos Koetsier	Grid Infrastructures for Secure Access to and Use of Bioinformatics Data: Experiences from the BRIDGES Project.	ARES	2006	DBLP DOI BibTeX RDF
1	Jens Ernst	A Distributed, Parallel System for Large-Scale Structure Recognition in Gene Expression Data.	HPCC	2006	DBLP DOI BibTeX RDF
1	Christian Posse, Antonio Sanfilippo, Banu Gopalan, Rick Riensche, Nathaniel Beagley, Bob Baddeley	Cross-Ontological Analytics: Combining Associative and Hierarchical Relations in the Gene Ontologies to Assess Gene Product Similarity.	International Conference on Computational Science	2006	DBLP DOI BibTeX RDF
1	Gregor Leban, Blaz Zupan, Gaj Vidmar, Ivan Bratko	VizRank: Data Visualization Guided by Machine Learning.	Data Min. Knowl. Discov.	2006	DBLP DOI BibTeX RDF	data mining, machine learning, data visualization, visual data mining, exploratory data analysis
1	Francisco Azuaje, Haiying Wang, Alban Chesneau	Non-linear mapping for exploratory data analysis in functional genomics.	BMC Bioinformatics	2005	DBLP DOI BibTeX RDF
1	Andrew R. Jones, Norman W. Paton	An analysis of extensible modelling for functional genomics data.	BMC Bioinformatics	2005	DBLP DOI BibTeX RDF
1	Barbara Lazzari, Andrea Caprera, Alberto Vecchietti, Alessandra Stella, Luciano Milanesi, Carlo Pozzi	ESTree db: a Tool for Peach Functional Genomics.	BMC Bioinformatics	2005	DBLP DOI BibTeX RDF
1	Ana Conesa, Stefan Götz, Juan Miguel García-Gómez, Javier Terol, Manuel Talón, Montserrat Robles	Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.	Bioinformatics	2005	DBLP DOI BibTeX RDF
1	Gregor Leban, Ivan Bratko, Uros Petrovic, Tomaz Curk, Blaz Zupan	VizRank: finding informative data projections in functional genomics by machine learning.	Bioinformatics	2005	DBLP DOI BibTeX RDF
1	Samuel Kaski, Janne Nikkilä, Janne Sinkkonen, Leo Lahti, Juha E. A. Knuuttila, Christophe Roos	Associative Clustering for Exploring Dependencies between Functional Genomics Data Sets.	IEEE/ACM Trans. Comput. Biology Bioinform.	2005	DBLP DOI BibTeX RDF	contingency table analysis, clustering, machine learning, Biology and genetics, multivariate statistics
1	Jan Struyf, Saso Dzeroski, Hendrik Blockeel, Amanda Clare	Hierarchical Multi-classification with Predictive Clustering Trees in Functional Genomics.	EPIA	2005	DBLP DOI BibTeX RDF
1	Duncan P. Brown, Nandini Krishnamurthy, Joseph M. Dale, Wayne Christopher, Kimmen Sjölander	Subfamily HMMS in Functional Genomics.	Pacific Symposium on Biocomputing	2005	DBLP BibTeX RDF
1	Kihoon Yoon, Stephen Kwek	An Unsupervised Learning Approach to Resolving the Data Imbalanced Issue in Supervised Learning Problems in Functional Genomics.	HIS	2005	DBLP DOI BibTeX RDF
1	Yavuz F. Yavuz, Hikmet Budak	Comparative Sequence Analysis to Identify Functional Elements for Functional Genomics.	METMBS	2005	DBLP BibTeX RDF
1	James P. Carson, Tao Ju, Christina Thaller, Musodiq Bello, Joe D. Warren, Gregor Eichele, Wah Chiu	Data Mining in situ Gene Expression Patterns at Cellular Resolution.	CSB Workshops	2005	DBLP DOI BibTeX RDF
1	Corey Powell, Joshua M. Stuart	Biological Pathway Prediction from Multiple Data Sources Using Iterative Bayesian Updating.	CSB Workshops	2005	DBLP DOI BibTeX RDF
1	Yong Ye, Xintao Wu	Efficient Causal Interaction Learning with Applications in Microarray.	ISMIS	2005	DBLP DOI BibTeX RDF
1	Nada Lavrac	Subgroup Discovery Techniques and Applications.	PAKDD	2005	DBLP DOI BibTeX RDF
1	Gary A. Kochenberger, Fred Glover, Bahram Alidaee, Haibo Wang	Clustering of Microarray data via Clique Partitioning.	J. Comb. Optim.	2005	DBLP DOI BibTeX RDF	clique partitioning, clustering, metaheuristics
1	Tom Van Court, Martin C. Herbordt, Richard J. Barton	Case study of a functional genomics application for an FPGA-based coprocessor.	Microprocessors and Microsystems	2004	DBLP DOI BibTeX RDF
1	Jeffrey D. Grant, Luke A. Somers, Yue Zhang, Frank J. Manion, Ghislain Bidaut, Michael F. Ochs	FGDP: functional genomics data pipeline for automated, multiple microarray data analyses.	Bioinformatics	2004	DBLP DOI BibTeX RDF
1	Raji Balasubramanian, Thomas LaFramboise, Denise Scholtens, Robert Gentleman	A graph-theoretic approach to testing associations between disparate sources of functional genomics data.	Bioinformatics	2004	DBLP DOI BibTeX RDF
1	Andrew Jones, Ela Hunt, Jonathan M. Wastling, Angel D. Pizarro, Christian J. Stoeckert Jr.	An object model and database for functional genomics.	Bioinformatics	2004	DBLP DOI BibTeX RDF
1	Mark-A. Krogel, Tobias Scheffer	Multi-Relational Learning, Text Mining, and Semi-Supervised Learning for Functional Genomics.	Machine Learning	2004	DBLP DOI BibTeX RDF	information extraction, co-training, propositionalization
1	Junshi Yazaki, Keiichi Kojima, Kouji Suzuki, Naoki Kishimoto, Shoshi Kikuchi	The Rice PIPELINE: a unification tool for plant functional genomics.	Nucleic Acids Research	2004	DBLP DOI BibTeX RDF
1	Detlev Bannasch, Alexander Mehrle, Karl-Heinz Glatting, Rainer Pepperkok, Annemarie Poustka, Stefan Wiemann	LIFEdb: a database for functional genomics experiments integrating information from external sources, and serving as a sample tracking system.	Nucleic Acids Research	2004	DBLP DOI BibTeX RDF
1	David Ruau, Jorge Duarte, Tarik Ourjdal, Guy Perrière, Vincent Laudet, Marc Robinson-Rechavi	Update of NUREBASE: nuclear hormone receptor functional genomics.	Nucleic Acids Research	2004	DBLP DOI BibTeX RDF
1	Dragan Gamberger, Nada Lavrac	Avoiding Data Overfitting in Scientific Discovery: Experiments in Functional Genomics.	ECAI	2004	DBLP BibTeX RDF
1	AnYuan Guo	A new framework for clustering algorithm evaluation in the domain of functional genomics.	SAC	2004	DBLP DOI BibTeX RDF	evaluation, Bayesian network, hierarchical clustering
1	Ana Conesa, Stefan Götz, Juan Miguel García-Gómez, Montserrat Robles, Manuel Talón	Blast2GO: A Universal Annotation and Visualization Tool for Functional Genomics Research.	Spanish Bioinformatics Conference	2004	DBLP BibTeX RDF
1	Jiawu Feng, Paolo Emilio Barbano, Bud Mishra	Time-frequency feature detection for time-course microarray data.	SAC	2004	DBLP DOI BibTeX RDF	local distance, time frequency analysis, gene networks, functional genomics
1	Richard M. Karp	Algorithms for inferring cis-regulatory structures and protein interaction networks.	RECOMB	2004	DBLP DOI BibTeX RDF
1	Jacques Cohen	Bioinformatics - an introduction for computer scientists.	ACM Comput. Surv.	2004	DBLP DOI BibTeX RDF	Molecular cell biology, RNA and protein structure, cell simulation and modeling, parsing biological sequences, dynamic programming, hidden-Markov-models, computer, microarray, alignments, DNA, phylogenetic trees
1	Sheng Zhong, Lu Tian, Cheng Li, Kai-Florian Storch, Wing Hung Wong	Comparative Analysis of Gene Sets in the Gene Ontology Space under the Multiple Hypothesis Testing Framework.	CSB	2004	DBLP DOI BibTeX RDF	False Discovery Rate, Q-value, GoSurfer, Data Mining, Visualization, Microarray, Gene Ontology