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Found 65 publication records. Showing 65 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Sandra Gesing, Jano I. van Hemert, Péter Kacsuk, Oliver Kohlbacher |
Special Issue: Portals for life sciences - Providing intuitive access to bioinformatic tools.  |
Concurrency and Computation: Practice and Experience  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Chun-Wei Tung, Matthias Ziehm, Andreas Kamper, Oliver Kohlbacher, Shinn-Ying Ho |
POPISK: T-cell reactivity prediction using support vector machines and string kernels. |
BMC Bioinformatics |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Marc Röttig, Marnix H. Medema, Kai Blin, Tilmann Weber, Christian Rausch, Oliver Kohlbacher |
NRPSpredictor2 - a web server for predicting NRPS adenylation domain specificity. |
Nucleic Acids Research |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas Hildebrandt, Anna Katharina Dehof, Alexander Rurainski, Andreas Bertsch, Marcel Schumann, Nora C. Toussaint, Andreas Moll, Daniel Stöckel, Stefan Nickels, Sabine C. Mueller, Hans-Peter Lenhof, Oliver Kohlbacher |
BALL - biochemical algorithms library 1.3. |
BMC Bioinformatics |
2010 |
DBLP DOI BibTeX RDF |
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| 1 | Sebastian Briesemeister, Jörg Rahnenführer, Oliver Kohlbacher |
Going from where to why - interpretable prediction of protein subcellular localization. |
Bioinformatics |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Marc Röttig, Christian Rausch, Oliver Kohlbacher |
Combining Structure and Sequence Information Allows Automated Prediction of Substrate Specificities within Enzyme Families. |
PLoS Computational Biology |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Sebastian Briesemeister, Jörg Rahnenführer, Oliver Kohlbacher |
YLoc - an interpretable web server for predicting subcellular localization. |
Nucleic Acids Research |
2010 |
DBLP DOI BibTeX RDF |
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| 1 | Sandra Gesing, Jano I. van Hemert, Jos Koetsier, Andreas Bertsch, Oliver Kohlbacher |
TOPP goes Rapid The OpenMS Proteomics Pipeline in a Grid-Enabled Web Portal. |
CCGRID |
2010 |
DBLP DOI BibTeX RDF |
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| 1 | Georg Birkenheuer, Sebastian Breuers, André Brinkmann, Dirk Blunk, Gregor Fels, Sandra Gesing, Sonja Herres-Pawlis, Oliver Kohlbacher, Jens Krüger 0002, Lars Packschies |
Grid-Workflows in Molecular Science. |
Software Engineering (Workshops) |
2010 |
DBLP BibTeX RDF |
|
| 1 | Christian Widmer, Nora C. Toussaint, Yasemin Altun, Oliver Kohlbacher, Gunnar Rätsch |
Novel Machine Learning Methods for MHC Class I Binding Prediction. |
PRIB |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Carsten Henneges, Marc Röttig, Oliver Kohlbacher, Andreas Zell |
Graphlet Data Mining of Energetical Interaction Patterns in Protein 3D Structures. |
IJCCI (ICFC-ICNC) |
2010 |
DBLP BibTeX RDF |
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| 1 | Torsten Blum, Sebastian Briesemeister, Oliver Kohlbacher |
MultiLoc2: integrating phylogeny and Gene Ontology terms improves subcellular protein localization prediction. |
BMC Bioinformatics |
2009 |
DBLP DOI BibTeX RDF |
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| 1 | Sebastian J. Schultheiß, Wolfgang Busch, Jan Lohmann, Oliver Kohlbacher, Gunnar Rätsch |
KIRMES: kernel-based identification of regulatory modules in euchromatic sequences. |
BMC Bioinformatics |
2009 |
DBLP BibTeX RDF |
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| 1 | Andreas Keller, Christina Backes, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Eckart Meese, Hans-Peter Lenhof |
A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis. |
Bioinformatics |
2009 |
DBLP DOI BibTeX RDF |
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| 1 | Sebastian J. Schultheiß, Wolfgang Busch, Jan Lohmann, Oliver Kohlbacher, Gunnar Rätsch |
KIRMES: kernel-based identification of regulatory modules in euchromatic sequences. |
Bioinformatics |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Magdalena Feldhahn, Pierre Dönnes, Philipp Thiel, Oliver Kohlbacher |
FRED - a framework for T-cell epitope detection. |
Bioinformatics |
2009 |
DBLP DOI BibTeX RDF |
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| 1 | Nora C. Toussaint, Oliver Kohlbacher |
OptiTope - a web server for the selection of an optimal set of peptides for epitope-based vaccines. |
Nucleic Acids Research |
2009 |
DBLP DOI BibTeX RDF |
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| 1 | Ernst Althaus, Gunnar W. Klau, Oliver Kohlbacher, Hans-Peter Lenhof, Knut Reinert |
Integer Linear Programming in Computational Biology. |
Efficient Algorithms |
2009 |
DBLP DOI BibTeX RDF |
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| 1 | Mario Albrecht, Andreas Kerren, Karsten Klein, Oliver Kohlbacher, Petra Mutzel, Wolfgang Paul, Falk Schreiber, Michael Wybrow |
On Open Problems in Biological Network Visualization. |
Graph Drawing |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Ole Schulz-Trieglaff, Nico Pfeifer, Clemens Gröpl, Oliver Kohlbacher, Knut Reinert |
LC-MSsim - a simulation software for liquid chromatography mass spectrometry data. |
BMC Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Marc Sturm, Andreas Bertsch, Clemens Gröpl, Andreas Hildebrandt, Rene Hussong, Eva Lange, Nico Pfeifer, Ole Schulz-Trieglaff, Alexandra Zerck, Knut Reinert, Oliver Kohlbacher |
OpenMS - An open-source software framework for mass spectrometry. |
BMC Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
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| 1 | Wiebke Timm, Alexandra Scherbart, Sebastian Böcker, Oliver Kohlbacher, Tim W. Nattkemper |
Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics. |
BMC Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas Keller, Christina Backes, Maher Al-Awadhi, Andreas Gerasch, Jan Küntzer, Oliver Kohlbacher, Michael Kaufmann, Hans-Peter Lenhof |
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments. |
BMC Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Torsten Blum, Oliver Kohlbacher |
MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization. |
Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Torsten Blum, Oliver Kohlbacher |
Using Atom Mapping Rules for an Improved Detection of Relevant Routes in Weighted Metabolic Networks. |
Journal of Computational Biology |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Nora C. Toussaint, Pierre Dönnes, Oliver Kohlbacher |
A Mathematical Framework for the Selection of an Optimal Set of Peptides for Epitope-Based Vaccines. |
PLoS Computational Biology |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Magdalena Feldhahn, Philipp Thiel, Mathias M. Schuler, Nina Hillen, Stefan Stevanovic, Hans-Georg Rammensee, Oliver Kohlbacher |
EpiToolKit - a web server for computational immunomics. |
Nucleic Acids Research |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Nico Pfeifer, Oliver Kohlbacher |
Multiple Instance Learning Allows MHC Class II Epitope Predictions Across Alleles. |
WABI |
2008 |
DBLP DOI BibTeX RDF |
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| 1 | Sebastian J. Schultheiß, Wolfgang Busch, Jan Lohmann, Oliver Kohlbacher, Gunnar Rätsch |
KIRMES: Kernel-based Identification of Regulatory Modules in Euchromatic Sequences. |
German Conference on Bioinformatics |
2008 |
DBLP BibTeX RDF |
|
| 1 | Jan Küntzer, Christina Backes, Torsten Blum, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof |
BNDB - The Biochemical Network Database. |
BMC Bioinformatics |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Nico Pfeifer, Andreas Leinenbach, Christian G. Huber, Oliver Kohlbacher |
Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational proteomics. |
BMC Bioinformatics |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Oliver Kohlbacher, Knut Reinert, Clemens Gröpl, Eva Lange, Nico Pfeifer, Ole Schulz-Trieglaff, Marc Sturm |
TOPP - the OpenMS proteomics pipeline. |
Bioinformatics |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas Hildebrandt, Ralf Blossey, Sergej Rjasanow, Oliver Kohlbacher, Hans-Peter Lenhof |
Electrostatic potentials of proteins in water: a structured continuum approach. |
Bioinformatics |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Hagit Shatkay, Annette Höglund, Scott Brady, Torsten Blum, Pierre Dönnes, Oliver Kohlbacher |
SherLoc: high-accuracy prediction of protein subcellular localization by integrating text and protein sequence data. |
Bioinformatics |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Torsten Blum, Oliver Kohlbacher |
Finding Relevant Biotransformation Routes in Weighted Metabolic Networks. |
German Conference on Bioinformatics |
2007 |
DBLP BibTeX RDF |
|
| 1 | Jan Küntzer, Torsten Blum, Andreas Gerasch, Christina Backes, Andreas Hildebrandt, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof |
BN++ - A Biological Information System. |
J. Integrative Bioinformatics |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Annette Höglund, Pierre Dönnes, Torsten Blum, Hans-Werner Adolph, Oliver Kohlbacher |
MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs and amino acid composition. |
Bioinformatics |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas Moll, Andreas Hildebrandt, Hans-Peter Lenhof, Oliver Kohlbacher |
BALLView: a tool for research and education in molecular modeling. |
Bioinformatics |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas Kerzmann, Dirk Neumann, Oliver Kohlbacher |
SLICK - Scoring and Energy Functions for Protein-Carbohydrate Interactions. |
Journal of Chemical Information and Modeling |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Dirk Neumann, Oliver Kohlbacher, Christian Merkwirth, Thomas Lengauer |
A Fully Computational Model for Predicting Percutaneous Drug Absorption. |
Journal of Chemical Information and Modeling |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Pierre Dönnes, Oliver Kohlbacher |
SVMHC: a server for prediction of MHC-binding peptides. |
Nucleic Acids Research |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Eva Lange, Clemens Gröpl, Knut Reinert, Oliver Kohlbacher, Andreas Hildebrandt |
High-Accuracy Peak Picking of Proteomics Data Using Wavelet Techniques. |
Pacific Symposium on Biocomputing |
2006 |
DBLP BibTeX RDF |
|
| 1 | Annette Höglund, Torsten Blum, Scott Brady, Pierre Dönnes, John San Miguel, Matthew Rocheford, Oliver Kohlbacher, Hagit Shatkay |
Significantly Improved Prediction of Subcellular Localization by Integrating Text and Protein Sequence Data . |
Pacific Symposium on Biocomputing |
2006 |
DBLP BibTeX RDF |
|
| 1 | Christian G. Huber, Oliver Kohlbacher, Knut Reinert (eds.) |
Computational Proteomics, 20.-25. November 2005 |
Computational Proteomics |
2006 |
DBLP BibTeX RDF |
|
| 1 | Daniel H. Huson, Oliver Kohlbacher, Andrei N. Lupas, Kay Nieselt, Andreas Zell (eds.) |
German Conference on Bioinformatics GCB 2006, 19.09. 2006 - 22.09. 2006 in Tübingen, Germany |
German Conference on Bioinformatics |
2006 |
DBLP BibTeX RDF |
|
| 1 | Jochen Supper, Pierre Dönnes, Oliver Kohlbacher |
Analysis of MHC-Peptide Binding Using Amino Acid Property-Based Decision Rules. |
ICAPR |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Christian G. Huber, Oliver Kohlbacher, Knut Reinert |
05471 Abstract Collection - Computational Proteomics. |
Computational Proteomics |
2005 |
DBLP BibTeX RDF |
|
| 1 | Christian G. Huber, Oliver Kohlbacher, Knut Reinert |
05471 Executive Summary - Computational Proteomics. |
Computational Proteomics |
2005 |
DBLP BibTeX RDF |
|
| 1 | Eva Lange, Clemens Gröpl, Oliver Kohlbacher, Andreas Hildebrandt |
High-accuracy peak picking of proteomics data. |
Computational Proteomics |
2005 |
DBLP BibTeX RDF |
|
| 1 | Marc Sturm, Sascha Quinten, Christian G. Huber, Oliver Kohlbacher |
A machine learning approach for prediction of DNA and peptide retention times. |
Computational Proteomics |
2005 |
DBLP BibTeX RDF |
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| 1 | Nathanaël Delmotte, Bettina M. Mayr, Andreas Leinenbach, Knut Reinert, Oliver Kohlbacher, Christoph L. Klein, Christian G. Huber |
Evaluation of LC-MS data for the absolute quantitative analysis of marker proteins. |
Computational Proteomics |
2005 |
DBLP BibTeX RDF |
|
| 1 | Michael R. Berthold, Robert C. Glen, Kay Diederichs, Oliver Kohlbacher, Ingrid Fischer (eds.) |
Computational Life Sciences, First International Symposium, CompLife 2005, Konstanz, Germany, September 25-27, 2005, Proceedings |
CompLife |
2005 |
DBLP BibTeX RDF |
|
| 1 | Clemens Gröpl, Eva Lange, Knut Reinert, Oliver Kohlbacher, Marc Sturm, Christian G. Huber, Bettina M. Mayr, Christoph L. Klein |
Algorithms for the Automated Absolute Quantification of Diagnostic Markers in Complex Proteomics Samples. |
CompLife |
2005 |
DBLP DOI BibTeX RDF |
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| 1 | Annette Höglund, Pierre Dönnes, Torsten Blum, Hans-Werner Adolph, Oliver Kohlbacher |
Using N-terminal targeting sequences, amino acid composition, and sequence motifs for predicting protein subcellular localizations. |
German Conference on Bioinformatics |
2005 |
DBLP BibTeX RDF |
|
| 1 | Oliver Kohlbacher, Knut Reinert |
Differenzielle Proteomanalyse - Experimentelle Methoden, algorithmische Herausforderungen (Differential Analysis in Proteomics: Experimental Methods, Algorithmic Challenges). |
it - Information Technology |
2004 |
DBLP BibTeX RDF |
|
| 1 | Liliana Florea, Bjarni V. Halldórsson, Oliver Kohlbacher, Russell Schwartz, Stephen Hoffman, Sorin Istrail |
Epitope Prediction Algorithms for Peptide based Vaccine Design. |
CSB |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Ernst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof, Peter Müller |
A Combinatorial Approach to Protein Docking with Flexible Side Chains. |
Journal of Computational Biology |
2002 |
DBLP BibTeX RDF |
|
| 1 | Marite Sirava, T. Schäfer, Markus Eiglsperger, Michael Kaufmann, Oliver Kohlbacher, Erich Bornberg-Bauer, Hans-Peter Lenhof |
BioMiner - modeling, analyzing, and visualizing biochemical pathways and networks. |
ECCB |
2002 |
DBLP BibTeX RDF |
|
| 1 | Russell J. Turner, Kabir Chaturvedi, Nathan Edwards, Daniel P. Fasulo, Aaron L. Halpern, Daniel H. Huson, Oliver Kohlbacher, Jason R. Miller, Knut Reinert, Karin A. Remington, Russell Schwartz, Brian Walenz, Shibu Yooseph, Sorin Istrail |
Visualization challenges for a new cyberpharmaceutical computing paradigm. |
IEEE Symposium on Parallel and Large-Data Visualization and Graphics |
2001 |
DBLP BibTeX RDF |
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| 1 | Oliver Kohlbacher, Andreas Burchardt, Andreas Moll, Andreas Hildebrandt, Peter Bayer, Hans-Peter Lenhof |
A NMR-spectra-based scoring function for protein docking. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
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| 1 | Oliver Kohlbacher, Hans-Peter Lenhof |
BALL-rapid software prototyping in computational molecular biology. |
Bioinformatics |
2000 |
DBLP DOI BibTeX RDF |
|
| 1 | Nicolas Boghossian, Oliver Kohlbacher, Hans-Peter Lenhof |
Rapid Software Prototyping in Molecular Modeling Using the Biochemical Algorithms Library (BALL). |
ACM Journal of Experimental Algorithmics |
2000 |
DBLP DOI BibTeX RDF |
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| 1 | Ernst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof, Peter Müller |
A combinatorial approach to protein docking with flexible side-chains. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
| 1 | Oliver Kohlbacher, Hans-Peter Lenhof |
Rapid Software Prototyping in Computational Molecular Biology. |
German Conference on Bioinformatics |
1999 |
DBLP BibTeX RDF |
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| 1 | Nicolas Boghossian, Oliver Kohlbacher, Hans-Peter Lenhof |
BALL: Biochemical Algorithms Library. |
Algorithm Engineering |
1999 |
DBLP BibTeX RDF |
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