| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Ivo L. Hofacker, Christian M. Reidys, Peter F. Stadler |
Symmetric circular matchings and RNA folding.  |
Discrete Mathematics  |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | Marc Hellmuth, Lydia Ostermeier, Peter F. Stadler |
Diagonalized Cartesian products of s-prime graphs are s-prime.  |
Discrete Mathematics  |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | Christian M. Reidys, Fenix W. D. Huang, Jørgen E. Andersen, Robert C. Penner, Peter F. Stadler, Markus E. Nebel |
Addendum: topology and prediction of RNA pseudoknots.  |
Bioinformatics  |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | David Langenberger, Sachin Pundhir, Claus Thorn Ekstrøm, Peter F. Stadler, Steve Hoffmann, Jan Gorodkin |
deepBlockAlign: a tool for aligning RNA-seq profiles of read block patterns.  |
Bioinformatics  |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | Marc Hellmuth, Lydia Ostermeier, Peter F. Stadler |
A Survey on Hypergraph Products.  |
Mathematics in Computer Science  |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | Lydia Ostermeier, Marc Hellmuth, Peter F. Stadler |
The Cartesian product of hypergraphs.  |
Journal of Graph Theory  |
2012 |
DBLP DOI BibTeX RDF |
|
| 1 | Marcus Lechner, Sven Findeiß, Lydia Steiner, Manja Marz, Peter F. Stadler, Sonja J. Prohaska |
Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis.  |
BMC Bioinformatics  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Hakim Tafer, Fabian Amman, Florian Eggenhofer, Peter F. Stadler, Ivo L. Hofacker |
Fast accessibility-based prediction of RNA-RNA interactions.  |
Bioinformatics  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Christian M. Reidys, Fenix W. D. Huang, Jørgen E. Andersen, Robert C. Penner, Peter F. Stadler, Markus E. Nebel |
Topology and prediction of RNA pseudoknots.  |
Bioinformatics  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Stephanie Kehr, Sebastian Bartschat, Peter F. Stadler, Hakim Tafer |
PLEXY: efficient target prediction for box C/D snoRNAs.  |
Bioinformatics  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Dominic Rose, Michael Hiller, Katharina Schutt, Jörg Hackermüller, Rolf Backofen, Peter F. Stadler |
Computational discovery of human coding and non-coding transcripts with conserved splice sites.  |
Bioinformatics  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Christian Höner zu Siederdissen, Stephan H. F. Bernhart, Peter F. Stadler, Ivo L. Hofacker |
A folding algorithm for extended RNA secondary structures.  |
Bioinformatics [ISMB/ECCB] ![In: Bioinformatics [ISMB/ECCB] 27(13), pp. 129-136, 2011. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Peter Menzel, Peter F. Stadler, Jan Gorodkin |
maxAlike: maximum likelihood-based sequence reconstruction with application to improved primer design for unknown sequences.  |
Bioinformatics  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Jakob L. Andersen, Christoph Flamm, Daniel Merkle, Peter F. Stadler |
Maximizing Output and Recognizing Autocatalysis in Chemical Reaction Networks is NP-Complete  |
CoRR  |
2011 |
DBLP BibTeX RDF |
|
| 1 | Florian Eggenhofer, Hakim Tafer, Peter F. Stadler, Ivo L. Hofacker |
RNApredator: fast accessibility-based prediction of sRNA targets.  |
Nucleic Acids Research  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Mario Fasold, David Langenberger, Hans Binder, Peter F. Stadler, Steve Hoffmann |
DARIO: a ncRNA detection and analysis tool for next-generation sequencing experiments.  |
Nucleic Acids Research  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexander Ullrich, Markus Rohrschneider, Gerik Scheuermann, Peter F. Stadler, Christoph Flamm |
In Silico Evolution of Early Metabolism.  |
Artificial Life  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Wolfgang Otto, Peter F. Stadler, Sonja J. Prohaska |
Phylogenetic Footprinting and Consistent Sets of Local Aligments.  |
CPM  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | David Langenberger, Sebastian Bartschat, Jana Hertel, Steve Hoffmann, Hakim Tafer, Peter F. Stadler |
MicroRNA or Not MicroRNA?  |
BSB  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Mario Fasold, Peter F. Stadler, Hans Binder |
G-stack modulated probe intensities on expression arrays - sequence corrections and signal calibration.  |
BMC Bioinformatics  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Hakim Tafer, Stephanie Kehr, Jana Hertel, Ivo L. Hofacker, Peter F. Stadler |
RNAsnoop: efficient target prediction for H/ACA snoRNAs.  |
Bioinformatics  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Fenix W. D. Huang, Jing Qin, Christian M. Reidys, Peter F. Stadler |
Target prediction and a statistical sampling algorithm for RNA-RNA interaction.  |
Bioinformatics  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Manja Marz, Nathalie Vanzo, Peter F. Stadler |
Temperature-Dependent Structural Variability of RNAs: spliced Leader RNAs and their Evolutionary History.  |
J. Bioinformatics and Computational Biology  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Stefan Jänicke, Christian Heine 0002, Marc Hellmuth, Peter F. Stadler, Gerik Scheuermann |
Visualization of Graph Products.  |
IEEE Trans. Vis. Comput. Graph.  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | David Langenberger, Clara Bermudez-Santana, Peter F. Stadler, Steve Hoffmann |
Identification and Classification of Small RNAs in Transcriptome Sequence Data.  |
Pacific Symposium on Biocomputing  |
2010 |
DBLP BibTeX RDF |
|
| 1 | Andreas R. Gruber, Sven Findeiß, Stefan Washietl, Ivo L. Hofacker, Peter F. Stadler |
RNAz 2.0: Improved Noncoding RNA Detection.  |
Pacific Symposium on Biocomputing  |
2010 |
DBLP BibTeX RDF |
|
| 1 | Rolf Backofen, Hamidreza Chitsaz, Ivo L. Hofacker, Süleyman Cenk Sahinalp, Peter F. Stadler |
Session Introduction.  |
Pacific Symposium on Biocomputing  |
2010 |
DBLP BibTeX RDF |
|
| 1 | Markus Rohrschneider, Alexander Ullrich, Andreas Kerren, Peter F. Stadler, Gerik Scheuermann |
Visual Network Analysis of Dynamic Metabolic Pathways.  |
ISVC  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Peter F. Stadler |
Evolution of the Long Non-coding RNAs MALAT1 and MENbeta/epsilon.  |
BSB  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Arli A. Parikesit, Peter F. Stadler, Sonja J. Prohaska |
Detection of Protein Domains in Eukaryotic Genome Sequences.  |
BSB  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Carlos Eduardo Ferreira, Satoru Miyano, Peter F. Stadler (eds.) |
Advances in Bioinformatics and Computational Biology, 5th Brazilian Symposium on Bioinformatics, BSB 2010, Rio de Janeiro, Brazil, August 31-September 3, 2010. Proceedings  |
BSB  |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Arli A. Parikesit, Peter F. Stadler, Sonja J. Prohaska |
Quantitative Comparison of Genomic-Wide Protein Domain Distributions.  |
GCB  |
2010 |
DBLP BibTeX RDF |
|
| 1 | Markus Riester, Peter F. Stadler, Konstantin Klemm |
FRANz: reconstruction of wild multi-generation pedigrees.  |
Bioinformatics  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Fenix W. D. Huang, Jing Qin, Christian M. Reidys, Peter F. Stadler |
Partition function and base pairing probabilities for RNA-RNA interaction prediction.  |
Bioinformatics  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Bogumil Kaczkowski, Elfar Torarinsson, Kristin Reiche, Jakob Hull Havgaard, Peter F. Stadler, Jan Gorodkin |
Structural profiles of human miRNA families from pairwise clustering.  |
Bioinformatics  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | David Langenberger, Clara Bermudez-Santana, Jana Hertel, Steve Hoffmann, Philipp Khaitovich, Peter F. Stadler |
Evidence for human microRNA-offset RNAs in small RNA sequencing data.  |
Bioinformatics  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Marc Hellmuth, Wilfried Imrich, Werner Klöckl, Peter F. Stadler |
Approximate graph products.  |
Eur. J. Comb.  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Steve Hoffmann, Christian Otto, Stefan Kurtz, Cynthia M. Sharma, Philipp Khaitovich, Jörg Vogel, Peter F. Stadler, Jörg Hackermüller |
Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures.  |
PLoS Computational Biology  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Marc Hellmuth, Wilfried Imrich, Werner Klöckl, Peter F. Stadler |
Local Algorithms for the Prime Factorization of Strong Product Graphs.  |
Mathematics in Computer Science  |
2009 |
DBLP BibTeX RDF |
|
| 1 | Andreas W. M. Dress, Bülent Karasözen, Peter F. Stadler, Gerhard-Wilhelm Weber |
Preface.  |
Discrete Applied Mathematics  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Konstantin Klemm, Peter F. Stadler |
A note on fundamental, non-fundamental, and robust cycle bases.  |
Discrete Applied Mathematics  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Axel Mosig, Türker Bíyíkoglu, Sonja J. Prohaska, Peter F. Stadler |
Discovering cis-regulatory modules by optimizing barbecues.  |
Discrete Applied Mathematics  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Frank Jühling, Mario Mörl, Roland K. Hartmann, Mathias Sprinzl, Peter F. Stadler, Joern Pütz |
tRNAdb 2009: compilation of tRNA sequences and tRNA genes.  |
Nucleic Acids Research  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Gil Benkö, Florian Centler, Peter Dittrich, Christoph Flamm, Bärbel M. R. Stadler, Peter F. Stadler |
A Topological Approach to Chemical Organizations.  |
Artificial Life  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | K. Scheibye-Alsing, Steve Hoffmann, A. Frankel, Peter Jensen, Peter F. Stadler, Y. Mang, N. Tommerup, M. J. Gilchrist, A.-B. Nygård, Susanna Cirera, Claus B. Jørgensen, Merete Fredholm, Jan Gorodkin |
Sequence assembly.  |
Computational Biology and Chemistry  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas Heffel, Sonja J. Prohaska, Peter F. Stadler, Gerhard Kauer, Jens-Peer Kuska |
Automatic Classification of Embryonic Fruit Fly Gene Expression Patterns.  |
Bildverarbeitung für die Medizin  |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivo Grosse, Steffen Neumann, Stefan Posch, Falk Schreiber, Peter F. Stadler (eds.) |
German Conference on Bioinformatics 2009, 28th to 30th September 2009, Martin Luther University Halle-Wittenberg, Germany  |
GCB  |
2009 |
DBLP BibTeX RDF |
|
| 1 | Peter Menzel, Jan Gorodkin, Peter F. Stadler |
Maximum Likelihood Estimation of Weight Matrices for Targeted Homology Search.  |
GCB  |
2009 |
DBLP BibTeX RDF |
|
| 1 | Jörg Lehmann, Peter F. Stadler, Sonja J. Prohaska |
SynBlast: Assisting the analysis of conserved synteny information.  |
BMC Bioinformatics  |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Stephan H. F. Bernhart, Ivo L. Hofacker, Sebastian Will, Andreas R. Gruber, Peter F. Stadler |
RNAalifold: improved consensus structure prediction for RNA alignments.  |
BMC Bioinformatics  |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Jana Hertel, Ivo L. Hofacker, Peter F. Stadler |
SnoReport: computational identification of snoRNAs with unknown targets.  |
Bioinformatics  |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Dominic Rose, Julian Jöris, Jörg Hackermüller, Kristin Reiche, Qiang Li, Peter F. Stadler |
Duplicated RNA genes in teleost Fish genomes.  |
J. Bioinformatics and Computational Biology  |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas W. M. Dress, Christoph Flamm, Guido Fritzsch, Stefan Grünewald, Matthias Kruspe, Sonja J. Prohaska, Peter F. Stadler |
Noisy: Identification of problematic columns in multiple sequence alignments.  |
Algorithms for Molecular Biology  |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Ulrike Mückstein, Hakim Tafer, Stephan H. F. Bernhart, Maribel Hernandez-Rosales, Jörg Vogel, Peter F. Stadler, Ivo L. Hofacker |
Translational Control by RNA-RNA Interaction: Improved Computation of RNA-RNA Binding Thermodynamics.  |
BIRD  |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas Heffel, Peter F. Stadler, Sonja J. Prohaska, Gerhard Kauer, Jens-Peer Kuska |
Process flow for classification and clustering of fruit fly gene expression patterns.  |
ICIP  |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Markus Riester, Peter F. Stadler, Konstantin Klemm |
FRANz: Fast Reconstruction of Wild Pedigrees.  |
German Conference on Bioinformatics  |
2008 |
DBLP BibTeX RDF |
|
| 1 | Matthias Kruspe, Peter F. Stadler |
Progressive multiple sequence alignments from triplets.  |
BMC Bioinformatics  |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Matthias Bernt, Daniel Merkle, Kai Ramsch, Guido Fritzsch, Marleen Perseke, Detlef Bernhard, Martin Schlegel, Peter F. Stadler, Martin Middendorf |
CREx: inferring genomic rearrangements based on common intervals.  |
Bioinformatics  |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Sebastian Will, Kristin Reiche, Ivo L. Hofacker, Peter F. Stadler, Rolf Backofen |
Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering.  |
PLoS Computational Biology  |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Kristin Reiche, Peter F. Stadler |
RNAstrand: reading direction of structured RNAs in multiple sequence alignments.  |
Algorithms for Molecular Biology  |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Manja Marz, Axel Mosig, Bärbel M. R. Stadler, Peter F. Stadler |
U7 snRNAs: A Computational Survey.  |
Genomics, Proteomics & Bioinformatics  |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher R. Stephens, Marc Toussaint, L. Darrell Whitley, Peter F. Stadler (eds.) |
Foundations of Genetic Algorithms, 9th International Workshop, FOGA 2007, Mexico City, Mexico, January 8-11, 2007, Revised Selected Papers  |
FOGA  |
2007 |
DBLP BibTeX RDF |
|
| 1 | Christoph Flamm, Ivo L. Hofacker, Bärbel M. R. Stadler, Peter F. Stadler |
Saddles and Barrier in Landscapes of Generalized Search Operators.  |
FOGA  |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Axel Mosig, Julian J.-L. Chen, Peter F. Stadler |
Homology Search with Fragmented Nucleic Acid Sequence Patterns.  |
WABI  |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Axel Mosig, Peter Menzel, Peter F. Stadler |
Tanimoto's Best Barbecue: Discovering Regulatory Modules using Tanimoto Scores.  |
German Conference on Bioinformatics  |
2007 |
DBLP BibTeX RDF |
|
| 1 | Christian V. Forst, Christoph Flamm, Ivo L. Hofacker, Peter F. Stadler |
Algebraic comparison of metabolic networks, phylogenetic inference, and metabolic innovation.  |
BMC Bioinformatics  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan H. F. Bernhart, Peter F. Stadler, Ivo L. Hofacker |
Thermodynamics of RNA-RNA binding.  |
Bioinformatics  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivo L. Hofacker, Peter F. Stadler |
Memory efficient folding algorithms for circular RNA secondary structures.  |
Bioinformatics  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Stephan H. F. Bernhart, Ivo L. Hofacker, Peter F. Stadler |
Local RNA base pairing probabilities in large sequences.  |
Bioinformatics  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Stephan H. F. Bernhart, Hakim Tafer, Ulrike Mückstein, Christoph Flamm, Peter F. Stadler, Ivo L. Hofacker |
Partition function and base pairing probabilities of RNA heterodimers.  |
Algorithms for Molecular Biology  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Burkhard Morgenstern, Peter F. Stadler |
New journal: Algorithms for Molecular Biology.  |
Algorithms for Molecular Biology  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Burkhard Morgenstern, Sonja J. Prohaska, Dirk Pöhler, Peter F. Stadler |
Multiple sequence alignment with user-defined anchor points.  |
Algorithms for Molecular Biology  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Wilfried Imrich, Peter F. Stadler |
A prime factor theorem for a generalized direct product.  |
Discussiones Mathematicae Graph Theory  |
2006 |
DBLP BibTeX RDF |
|
| 1 | Axel Mosig, Katrin Sameith, Peter F. Stadler |
Fragrep: An Efficient Search Tool for Fragmented Patterns in Genomic Sequences.  |
Genomics, Proteomics & Bioinformatics  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Paul Wei-Che Hsu, Hsien-Da Huang, Sheng-Da Hsu, Li-Zen Lin, Ann-Ping Tsou, Ching-Ping Tseng, Peter F. Stadler, Stefan Washietl, Ivo L. Hofacker |
miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes.  |
Nucleic Acids Research  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Christian Heine 0002, Gerik Scheuermann, Christoph Flamm, Ivo L. Hofacker, Peter F. Stadler |
Visualization of Barrier Tree Sequences.  |
IEEE Trans. Vis. Comput. Graph.  |
2006 |
DBLP DOI BibTeX RDF |
RNA folding, energy landscape, barrier tree, Graph drawing, fitness landscape, dynamic graph |
| 1 | Jana Hertel, Peter F. Stadler |
Hairpins in a Haystack: recognizing microRNA precursors in comparative genomics data.  |
ISMB (Supplement of Bioinformatics)  |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Sebastian Potzsch, Gerik Scheuermann, Peter F. Stadler, Michael T. Wolfinger, Christoph Flamm |
Visualization of Lattice-Based Protein Folding Simulations.  |
IV  |
2006 |
DBLP DOI BibTeX RDF |
Information visualization, multiple views, design guidelines, focus+context, overview+detail |
| 1 | Axel Mosig, Ivo L. Hofacker, Peter F. Stadler |
Comparative Analysis of Cyclic Sequences: Viroids and other Small Circular RNAs.  |
German Conference on Bioinformatics  |
2006 |
DBLP BibTeX RDF |
|
| 1 | Roman R. Stocsits, Ivo L. Hofacker, Claudia Fried, Peter F. Stadler |
Multiple sequence alignments of partially coding nucleic acid sequences.  |
BMC Bioinformatics  |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Petra M. Gleiss, Josef Leydold, Peter F. Stadler |
Minimum path bases and relevant paths.  |
Networks  |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Burkhard Morgenstern, Nadine Werner, Sonja J. Prohaska, Rasmus Steinkamp, Isabelle Schneider, Amarendran R. Subramanian, Peter F. Stadler, Jan Weyer-Menkhoff |
Multiple sequence alignment with user-defined constraints at GOBICS.  |
Bioinformatics  |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Camille Stephan-Otto Attolini, Peter F. Stadler |
Neutral Networks of Interacting RNA Secondary Structures.  |
Advances in Complex Systems  |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Kristin Missal, Dominic Rose, Peter F. Stadler |
Non-coding RNAs in Ciona intestinalis.  |
ECCB/JBI  |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivo L. Hofacker, Peter F. Stadler |
Memory Efficient Folding Algorithms for Circular RNA Secondary Structures.  |
German Conference on Bioinformatics  |
2005 |
DBLP BibTeX RDF |
|
| 1 | Ulrike Mückstein, Hakim Tafer, Jörg Hackermüller, Stephan H. F. Bernhart, Peter F. Stadler, Ivo L. Hofacker |
Thermodynamics of RNA-RNA Binding.  |
German Conference on Bioinformatics  |
2005 |
DBLP BibTeX RDF |
|
| 1 | Camille Stephan-Otto Attolini, Peter F. Stadler, Christoph Flamm |
CelloS: A Multi-level Approach to Evolutionary Dynamics.  |
ECAL  |
2005 |
DBLP DOI BibTeX RDF |
Artificial Cells, Naegleria gruberi, evolution, gene regulation |
| 1 | Gil Benkö, Christoph Flamm, Peter F. Stadler |
Explicit Collision Simulation of Chemical Reactions in a Graph Based Artificial Chemistry.  |
ECAL  |
2005 |
DBLP DOI BibTeX RDF |
Elementary Reactions, Energy Conservation, Artificial Chemistry |
| 1 | Ivo L. Hofacker, Stephan H. F. Bernhart, Peter F. Stadler |
Alignment of RNA base pairing probability matrices.  |
Bioinformatics  |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivo L. Hofacker, Barbara Priwitzer, Peter F. Stadler |
Prediction of locally stable RNA secondary structures for genome-wide surveys.  |
Bioinformatics  |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivo L. Hofacker, Peter F. Stadler, Roman R. Stocsits |
Conserved RNA secondary structures in viral genomes: a survey.  |
Bioinformatics  |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Franziska Berger, Christoph Flamm, Petra M. Gleiss, Josef Leydold, Peter F. Stadler |
Counterexamples in Chemical Ring Perception.  |
Journal of Chemical Information and Modeling  |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Claudia Fried, Wim Hordijk, Sonja J. Prohaska, Claus R. Stadler, Peter F. Stadler |
The Footprint Sorting Problem.  |
Journal of Chemical Information and Modeling  |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Christina Witwer, Ivo L. Hofacker, Peter F. Stadler |
Prediction of Consensus RNA Secondary Structures Including Pseudoknots.  |
IEEE/ACM Trans. Comput. Biology Bioinform.  |
2004 |
DBLP DOI BibTeX RDF |
covariance, RNA secondary structure, pseudoknots |
| 1 | Ivo L. Hofacker, Peter F. Stadler |
The Partition Function Variant of Sankoff's Algorithm.  |
International Conference on Computational Science  |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | C. Thurner, Ivo L. Hofacker, Peter F. Stadler |
Conserved RNA Pseudoknots.  |
German Conference on Bioinformatics  |
2004 |
DBLP BibTeX RDF |
|
| 1 | Burkhard Morgenstern, Sonja J. Prohaska, Nadine Werner, Jan Weyer-Menkhoff, Isabelle Schneider, Amarendran R. Subramanian, Peter F. Stadler |
Multiple sequence alignment with user-defined constraints.  |
German Conference on Bioinformatics  |
2004 |
DBLP BibTeX RDF |
|
| 1 | Peter F. Stadler, Christoph Flamm |
Barrier Trees on Poset-Valued Landscapes.  |
Genetic Programming and Evolvable Machines  |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Gil Benkö, Christoph Flamm, Peter F. Stadler |
A Graph-Based Toy Model of Chemistry.  |
Journal of Chemical Information and Computer Sciences  |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Ingrid G. Abfalter, Christoph Flamm, Peter F. Stadler |
Design of multi-stable nucleid acid sequences.  |
German Conference on Bioinformatics  |
2003 |
DBLP BibTeX RDF |
|