| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Stefan Janssen, Christian Schudoma, Gerhard Steger, Robert Giegerich |
Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure prediction.  |
BMC Bioinformatics  |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Burkhard Linke, Robert Giegerich, Alexander Goesmann |
Conveyor: a workflow engine for bioinformatic analyses. |
Bioinformatics |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Christian Höner zu Siederdissen |
Semantics and Ambiguity of Stochastic RNA Family Models. |
IEEE/ACM Trans. Comput. Biology Bioinform. |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Georg Sauthoff |
Yield grammar analysis in the Bellman's GAP compiler. |
LDTA |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Stefanie Schirmer, Robert Giegerich |
Forest Alignment with Affine Gaps and Anchors. |
CPM |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Georg Sauthoff, Stefan Janssen, Robert Giegerich |
Bellman's GAP: a declarative language for dynamic programming. |
PPDP |
2011 |
DBLP DOI BibTeX RDF |
|
| 1 | Andreas Bremges, Stefanie Schirmer, Robert Giegerich |
Fine-tuning structural RNA alignments in the twilight zone. |
BMC Bioinformatics |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Claus Brabrand, Robert Giegerich, Anders Møller |
Analyzing ambiguity of context-free grammars. |
Sci. Comput. Program. |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Stefan Janssen, Robert Giegerich |
Faster computation of exact RNA shape probabilities. |
Bioinformatics |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Corinna Theis, Stefan Janssen, Robert Giegerich |
Prediction of RNA Secondary Structure Including Kissing Hairpin Motifs. |
WABI |
2010 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael Beckstette, Robert Homann, Robert Giegerich, Stefan Kurtz |
Significant speedup of database searches with HMMs by search space reduction with PSSM family models. |
Bioinformatics |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Homann, David Fleer, Robert Giegerich, Marc Rehmsmeier |
mkESA: enhanced suffix array construction tool. |
Bioinformatics |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Mohamed Ibrahim Abouelhoda, Robert Giegerich, Behshad Behzadi, Jean-Marc Steyaert |
Alignment of Minisatellite Maps Based on Run-Length Encoding Scheme. |
J. Bioinformatics and Computational Biology |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Peter Steffen, Robert Giegerich, Mathieu Giraud |
GPU Parallelization of Algebraic Dynamic Programming. |
PPAM |
2009 |
DBLP DOI BibTeX RDF |
|
| 1 | Stefan Janssen, Jens Reeder, Robert Giegerich |
Shape based indexing for faster search of RNA family databases. |
BMC Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Anna-Lena Lamprecht, Tiziana Margaria, Bernhard Steffen, Alexander Sczyrba, Sven Hartmeier, Robert Giegerich |
GeneFisher-P: variations of GeneFisher as processes in Bio-jETI. |
BMC Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Julia Herold, Stefan Kurtz, Robert Giegerich |
Efficient computation of absent words in genomic sequences. |
BMC Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Alvis Brazma, Inge Jonassen, Esko Ukkonen, Martin Vingron |
The BREW workshop series: a stimulating experience in PhD education. |
Briefings in Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexander Sczyrba, Susanne Konermann, Robert Giegerich |
Two interactive Bioinformatics courses at the Bielefeld University Bioinformatics Server. |
Briefings in Bioinformatics |
2008 |
DBLP DOI BibTeX RDF |
|
| 1 | Mohamed Ibrahim Abouelhoda, Robert Giegerich, Behshad Behzadi, Jean-Marc Steyaert |
Alignment of Minisatellite Maps: A Minimum Spanning Tree-based Approach. |
APBC |
2008 |
DBLP BibTeX RDF |
|
| 1 | Jens Reeder, Peter Steffen, Robert Giegerich |
pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows. |
Nucleic Acids Research |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Janina Reeder, Jens Reeder, Robert Giegerich |
Locomotif: from graphical motif description to RNA motif search. |
ISMB/ECCB (Supplement of Bioinformatics) |
2007 |
DBLP DOI BibTeX RDF |
|
| 1 | Claus Brabrand, Robert Giegerich, Anders Møller |
Analyzing Ambiguity of Context-Free Grammars. |
CIAA |
2007 |
DBLP DOI BibTeX RDF |
CFG ambiguity, regular approximation, RNA analysis |
| 1 | Peter Steffen, Robert Giegerich |
Correction: versatile and declarative dynamic programming using pair algebras. |
BMC Bioinformatics |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael Beckstette, Robert Homann, Robert Giegerich, Stefan Kurtz |
Fast index based algorithms and software for matching position specific scoring matrices. |
BMC Bioinformatics |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Philipp N. Seibel, Jan Krüger, Sven Hartmeier, Knut Schwarzer, Kai Löwenthal, Henning Mersch, Thomas Dandekar, Robert Giegerich |
XML schemas for common bioinformatic data types and their application in workflow systems. |
BMC Bioinformatics |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Peter Steffen, Robert Giegerich |
Table design in dynamic programming. |
Inf. Comput. |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Wolfgang Gerlach, Robert Giegerich |
GUUGle: a utility for fast exact matching under RNA complementary rules including G-U base pairing. |
Bioinformatics |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Peter Steffen, Björn Voß, Marc Rehmsmeier, Jens Reeder, Robert Giegerich |
RNAshapes: an integrated RNA analysis package based on abstract shapes. |
Bioinformatics |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Ketil Malde, Robert Giegerich |
Calculating PSSM probabilities with lazy dynamic programming. |
J. Funct. Program. |
2006 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Peter Steffen |
Challenges in the compilation of a domain specific language for dynamic programming. |
SAC |
2006 |
DBLP DOI BibTeX RDF |
biosequence analysis, dynamic programming, domain specific languages |
| 1 | Janina Reeder, Robert Giegerich |
A graphical programming system for molecular motif search. |
GPCE |
2006 |
DBLP DOI BibTeX RDF |
dynamic programming, RNA structure |
| 1 | Janina Reeder, Peter Steffen, Robert Giegerich |
Effective ambiguity checking in biosequence analysis. |
BMC Bioinformatics |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Peter Steffen, Robert Giegerich |
Versatile and declarative dynamic programming using pair algebras. |
BMC Bioinformatics |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Jens Reeder, Robert Giegerich |
Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction. |
Bioinformatics |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael Beckstette, Jens T. Mailänder, Richard J. Marhöfer, Alexander Sczyrba, Enno Ohlebusch, Robert Giegerich, Paul M. Selzer |
Genlight: Interactive high-throughput sequence analysis and comparative genomics. |
J. Integrative Bioinformatics |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Paul P. Gardner, Robert Giegerich |
A comprehensive comparison of comparative RNA structure prediction approaches. |
BMC Bioinformatics |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Jens Reeder, Robert Giegerich |
Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics. |
BMC Bioinformatics |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Carsten Meyer, Peter Steffen |
A discipline of dynamic programming over sequence data. |
Sci. Comput. Program. |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Björn Voss, Carsten Meyer, Robert Giegerich |
Evaluating the predictability of conformational switching in RNA. |
Bioinformatics |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Jomuna V. Choudhuri, Chris Schleiermacher, Stefan Kurtz, Robert Giegerich |
GenAlyzer: interactive visualization of sequence similarities between entire genomes. |
Bioinformatics |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Matthias Höchsmann, Björn Voss, Robert Giegerich |
Pure Multiple RNA Secondary Structure Alignments: A Progressive Profile Approach. |
IEEE/ACM Trans. Comput. Biology Bioinform. |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Jan Krüger, Alexander Sczyrba, Stefan Kurtz, Robert Giegerich |
e2g: an interactive web-based server for efficiently mapping large EST and cDNA sets to genomic sequences. |
Nucleic Acids Research |
2004 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael Beckstette, Dirk Strothmann, Robert Homann, Robert Giegerich, Stefan Kurtz |
PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays. |
German Conference on Bioinformatics |
2004 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Jens Stoye (eds.) |
Proceedings of the German Conference on Bioinformatics (GCB 2004), Bielefeld, Germany, October 4-6, 2004 |
German Conference on Bioinformatics |
2004 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Stefan Kurtz, Jens Stoye |
Efficient implementation of lazy suffix trees. |
Softw., Pract. Exper. |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexander Sczyrba, Jan Krüger, Henning Mersch, Stefan Kurtz, Robert Giegerich |
RNA-related tools on the Bielefeld Bioinformatics Server. |
Nucleic Acids Research |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Matthias Höchsmann, Thomas Töller, Robert Giegerich, Stefan Kurtz |
Local Similarity in RNA Secondary Structures. |
CSB |
2003 |
DBLP DOI BibTeX RDF |
|
| 1 | Björn Voß, Robert Giegerich |
Prediction of conformational switching in RNA. |
German Conference on Bioinformatics |
2003 |
DBLP BibTeX RDF |
|
| 1 | Alexander Goesmann, Martin Haubrock, Folker Meyer, Jörn Kalinowski, Robert Giegerich |
PathFinder: reconstruction and dynamic visualization of metabolic pathways. |
Bioinformatics |
2002 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Carsten Meyer |
Algebraic Dynamic Programming. |
AMAST |
2002 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich |
Towards A Discipline of Dynamic Programming. |
GI Jahrestagung |
2002 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Peter Steffen |
Implementing Algebraic Dynamic Programming in the Functional and the Imperative Programming Paradigm. |
MPC |
2002 |
DBLP DOI BibTeX RDF |
|
| 1 | Georg Fuellen, Johann-Wolfgang Wägele, Robert Giegerich |
Minimum conflict: a divide-and-conquer approach to phylogeny estimation. |
Bioinformatics |
2001 |
DBLP DOI BibTeX RDF |
|
| 1 | Dirk Evers, Robert Giegerich |
Reducing the Conformation Space in RNA Structure Prediction. |
German Conference on Bioinformatics |
2001 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich |
A systematic approach to dynamic programming in bioinformatics. |
Bioinformatics |
2000 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich |
Explaining and Controlling Ambiguity in Dynamic Programming. |
CPM |
2000 |
DBLP DOI BibTeX RDF |
|
| 1 | Stefan Kurtz, Enno Ohlebusch, Chris Schleiermacher, Jens Stoye, Robert Giegerich |
Computation and Visualization of Degenerate Repeats in Complete Genomes. |
ISMB |
2000 |
DBLP BibTeX RDF |
|
| 1 | Bernd Bütow, Robert Giegerich, Enno Ohlebusch, Stephan Thesing |
Semantic Matching for Left-Linear Convergent Rewrite Systems |
Journal of Functional and Logic Programming |
1999 |
DBLP BibTeX RDF |
|
| 1 | Dirk Evers, Robert Giegerich |
RNA movies: visualizing RNA secondary structure spaces. |
Bioinformatics |
1999 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Dirk Haase, Marc Rehmsmeier |
Prediction and Visualization of Structural Switches in RNA. |
Pacific Symposium on Biocomputing |
1999 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Stefan Kurtz, Jens Stoye |
Efficient Implementation of Lazy Suffix Trees. |
Algorithm Engineering |
1999 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Dieter Lorenz |
ViSeL - An interactive course in DNA Sequencing. |
Workshop Multimedia-Systeme, GI Jahrestagung |
1998 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Stefan Kurtz |
From Ukkonen to McCreight and Weiner: A Unifying View of Linear-Time Suffix Tree Construction. |
Algorithmica |
1997 |
DBLP DOI BibTeX RDF |
|
| 1 | Henning Hermjakob, Robert Giegerich, Walter Arnold |
RIFLE: Rapid Identification of Microorganisms by Fragment Length Evaluation. |
ISMB |
1997 |
DBLP BibTeX RDF |
|
| 1 | Dirk Evers, Robert Giegerich |
RNA Movies: Visualizing RNA secondary structure spaces. |
German Conference on Bioinformatics |
1997 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Folker Meyer, Chris Schleiermacher |
GeneFisher-Software Support for the Detection of Postulated Genes. |
ISMB |
1996 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Christian Büschking |
Sequence Analysis with Distributed Resources: A WWW-Based Course. |
German Conference on Bioinformatics |
1996 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Stefan Kurtz |
A Comparison of Imperative and Purely Functional Suffix Tree Constructions. |
Sci. Comput. Program. |
1995 |
DBLP DOI BibTeX RDF |
|
| 1 | Bernd Bütow, Robert Giegerich, Enno Ohlebusch, Stephan Thesing |
A New Strategy for Semantic Matching |
PLILP |
1995 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Stefan Kurtz |
Suffix Trees in the Functional Programming Paradigm. |
ESOP |
1994 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Susan L. Graham (eds.) |
Code Generation - Concepts, Tools, Techniques, Workshop on Code Generation, Dagstuhl, Germany, 20-24 May 1991 |
Code Generation |
1992 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Enno Ohlebusch |
An Implicit Representation of Infinite Sequences of Terms. |
Bulletin of the EATCS |
1991 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Willi Schepper |
Der Studiengang Naturwissenschaftliche Informatik an der Universität Bielefeld. |
Physik und Informatik |
1991 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich |
Considerate Code Selection. |
Code Generation |
1991 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich |
Code Selection by Inversion of Order-Sorted Derivors. |
Theor. Comput. Sci. |
1990 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich |
On the Structure of Verifiable Code Generator Specifications. |
PLDI |
1990 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich |
Composition and Evaluation of Attribute Coupled Grammars. |
Acta Inf. |
1988 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Karl Schmal |
Code Selection Techniques: Pattern Matching, Tree Parsing, and Inversion of Derivors. |
ESOP |
1988 |
DBLP DOI BibTeX RDF |
|
| 1 | Harald Ganzinger, Robert Giegerich |
A note on termination in combinatiosn of heterogeneous term rewriting systems. |
Bulletin of the EATCS |
1987 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich |
Logic specification of code generation techniques. |
Programs as Data Objects |
1985 |
DBLP DOI BibTeX RDF |
|
| 1 | Harald Ganzinger, Robert Giegerich |
Attribute coupled grammars. |
SIGPLAN Symposium on Compiler Construction |
1984 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich |
A Formal Framework for the Derivation of Machine-Specific Optimizers. |
ACM Trans. Program. Lang. Syst. |
1983 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich |
A Formal Model of Instruction Set Semantics. |
Fachtagung über Programmiersprachen |
1982 |
DBLP BibTeX RDF |
|
| 1 | Harald Ganzinger, Robert Giegerich, Ulrich Möncke, Reinhard Wilhelm |
A Truly Generative Semantics-Directed Compiler Generator. |
SIGPLAN Symposium on Compiler Construction |
1982 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich |
Automatic Generation of Machine Specific Code Optimizers. |
POPL |
1982 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Ulrich Möncke, Reinhard Wilhelm |
Invariance of Approximate Semantics with Respect to Program Transformations. |
GI Jahrestagung |
1981 |
DBLP BibTeX RDF |
|
| 1 | Robert Giegerich, Reinhard Wilhelm |
Counter-One-Pass Features in One-Pass Compilation: A Formalization Using Attribute Grammars. |
Inf. Process. Lett. |
1978 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert Giegerich, Reinhard Wilhelm |
Implementierbarkeit attributierter Grammatiken. |
GI Jahrestagung |
1977 |
DBLP BibTeX RDF |
|
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