Search results for "chemical kinetics"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
3	John C. Linford, John Michalakes, Manish Vachharajani, Adrian Sandu	Multi-core acceleration of chemical kinetics for simulation and prediction.	SC	2009	DBLP DOI BibTeX RDF	chemical kinetics, kinetic preprocessor, open-MP, multi-core, cell broadband engine, NVIDIA CUDA, atmospheric modeling
2	Vassilios Sotiropoulos, Marie-Nathalie Contou-Carrere, Prodromos Daoutidis, Yiannis N. Kaznessis	Model Reduction of Multiscale Chemical Langevin Equations: A Numerical Case Study.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	stochastic chemical kinetics, chemical Langevin equations (CLEs), stiff biomolecular systems, Model reduction, multiscale models
2	Daniel T. Gillespie	Simulation Methods in Systems Biology.	SFM	2008	DBLP DOI BibTeX RDF	stochastic chemical kinetics, stochastic simulation algorithm, tau-leaping, Langevin equation, Fokker-Planck equation, stiff systems, slow-scale stochastic simulation algorithm, Michaelis-Menten, enzyme-substrate reaction, multiscale, master equation
2	Anna V. Kononova, Kevin J. Hughes, Mohamed Pourkashanian, Derek B. Ingham	Fitness Diversity Based Adaptive Memetic Algorithm for solving inverse problems of chemical kinetics.	IEEE Congress on Evolutionary Computation	2007	DBLP DOI BibTeX RDF
2	Prasenjit Mitra, C. Lee Giles, Bingjun Sun, Ying Liu	ChemXSeer: a digital library and data repository for chemical kinetics.	CIMS	2007	DBLP DOI BibTeX RDF	chemistry informatics, database, digital library, cyberinfrastructure
2	Lionel Elliott, Derek B. Ingham, Adrian G. Kyne, Nicolae S. Mera, Mohamed Pourkashanian, Christopher W. Wilson	An Informed Operator Based Genetic Algorithm for Tuning the Reaction Rate Parameters of Chemical Kinetics Mechanisms.	GECCO	2004	DBLP DOI BibTeX RDF
2	David Garfinkel, Joseph D. Rutledge, Joseph J. Higgins	Simulation and analysis of biochemical systems: I. representation of chemical kinetics.	Commun. ACM	1961	DBLP DOI BibTeX RDF
1	R. Novella, A. García, J. M. Pastor, V. Domenech	The role of detailed chemical kinetics on CFD diesel spray ignition and combustion modelling.	Mathematical and Computer Modelling	2011	DBLP DOI BibTeX RDF
1	Saswati Dana, Soumyendu Raha	Physically consistent simulation of mesoscale chemical kinetics: The non-negative FIS-α method.	J. Comput. Physics	2011	DBLP DOI BibTeX RDF
1	Matthew D. Johnston, David Siegel	Weak Dynamical Nonemptiability and Persistence of Chemical Kinetics Systems.	SIAM Journal of Applied Mathematics	2011	DBLP DOI BibTeX RDF
1	T.-H. Ahn, A. Sandu	Implicit Second Order Weak Taylor Tau-Leaping Methods for the Stochastic Simulation of Chemical Kinetics.	Procedia CS	2011	DBLP DOI BibTeX RDF
1	Michail Stamatakis, Dionisios G. Vlachos	Equivalence of on-lattice stochastic chemical kinetics with the well-mixed chemical master equation in the limit of fast diffusion.	Computers & Chemical Engineering	2011	DBLP DOI BibTeX RDF
1	Tae-Hyuk Ahn, Adrian Sandu	Fully implicit tau-leaping methods for the stochastic simulation of chemical kinetics.	SpringSim (HPC)	2011	DBLP BibTeX RDF
1	Guangzhou Chen, Jiaquan Wang, Ruzhong Li	Identification of Parameters in Chemical Kinetics Using a Hybrid Algorithm of Artificial Bee Colony Algorithm and Simplex.	AICI	2011	DBLP DOI BibTeX RDF
1	John C. Linford, John Michalakes, Manish Vachharajani, Adrian Sandu	Automatic Generation of Multicore Chemical Kernels.	IEEE Trans. Parallel Distrib. Syst.	2011	DBLP DOI BibTeX RDF	KPPA, chemical kinetics, Kinetics PreProcessor, WRF-Chem, CMAQ, multicore, OpenMP, Cell Broadband Engine, NVIDIA CUDA, atmospheric modeling
1	Michael Douglas Schmidt, Hod Lipson	Automated modeling of stochastic reactions with large measurement time-gaps.	GECCO	2011	DBLP DOI BibTeX RDF
1	Dirk Lebiedz, Volkmar Reinhardt, Jochen Siehr	Minimal curvature trajectories: Riemannian geometry concepts for slow manifold computation in chemical kinetics.	J. Comput. Physics	2010	DBLP DOI BibTeX RDF
1	Joseph K. Scott, Paul I. Barton	Tight, efficient bounds on the solutions of chemical kinetics models.	Computers & Chemical Engineering	2010	DBLP DOI BibTeX RDF
1	Sahar M. Monfared, Vikram Krishnamurthy, Bruce Cornell	Chemical kinetics and mass transport in an ion channel based biosensor.	CDC	2010	DBLP DOI BibTeX RDF
1	Heinz Koeppl, Gianluca Setti, Serge Pelet, Mauro Mangia, Tatjana Petrov, Matthias Peter	Probability metrics to calibrate stochastic chemical kinetics.	ISCAS	2010	DBLP DOI BibTeX RDF
1	Sotiria Lampoudi, Dan T. Gillespie, Linda R. Petzold	Effect of excluded volume on 2D discrete stochastic chemical kinetics.	J. Comput. Physics	2009	DBLP DOI BibTeX RDF
1	Yoojin Jang, Insung Ihm	Chemical kinetics-assisted, path-based smoke simulation.	Journal of Visualization and Computer Animation	2009	DBLP DOI BibTeX RDF
1	Stefan Engblom	Parallel in Time Simulation of Multiscale Stochastic Chemical Kinetics.	Multiscale Modeling & Simulation	2009	DBLP DOI BibTeX RDF
1	Shev MacNamara, Kevin Burrage	Krylov and steady-state techniques for the solution of the chemical master equation for the mitogen-activated protein kinase cascade.	Numerical Algorithms	2009	DBLP DOI BibTeX RDF	Mathematics Subject Classifications (2000) 60H35, 65C40, 65F10, 65F50
1	Luca Bortolussi, Alberto Policriti	Dynamical Systems and Stochastic Programming: To Ordinary Differential Equations and Back.	T. Comp. Sys. Biology	2009	DBLP DOI BibTeX RDF
1	Gianluigi Zavattaro, Luca Cardelli	Termination Problems in Chemical Kinetics.	CONCUR	2008	DBLP DOI BibTeX RDF
1	David Soloveichik, Georg Seelig, Erik Winfree	DNA as a Universal Substrate for Chemical Kinetics.	DNA	2008	DBLP DOI BibTeX RDF
1	Anna V. Kononova, Derek B. Ingham, Mohamed Pourkashanian	Simple Scheduled Memetic Algorithm for inverse problems in higher dimensions: Application to chemical kinetics.	IEEE Congress on Evolutionary Computation	2008	DBLP DOI BibTeX RDF
1	Yuan Shi, Xing Zhong	Hierarchical Differential Evolution for Parameter Estimation in Chemical Kinetics.	PRICAI	2008	DBLP DOI BibTeX RDF	parameter estimation, hierarchy, Differential evolution, kinetic model
1	David Soloveichik, Matthew Cook, Erik Winfree, Jehoshua Bruck	Computation with finite stochastic chemical reaction networks.	Natural Computing	2008	DBLP DOI BibTeX RDF	Stochastic chemical kinetics, Molecular counts, Turing-universal computation, Probabilistic computation
1	Walter Fontana	Systems biology, models, and concurrency.	POPL	2008	DBLP DOI BibTeX RDF	kappa, models, systems biology
1	Ivan Tyukin, Erik Steur, Henk Nijmeijer, Cees van Leeuwen	Non-uniform small-gain theorems for systems with unstable invariant sets.	CDC	2008	DBLP DOI BibTeX RDF
1	Wensheng Shen, Changjiang Zhang, Jun Zhang 0001	Multiscale simulation of ligand-receptor binding and dissociation in circulation.	ACM Southeast Regional Conference	2007	DBLP DOI BibTeX RDF	ligand-receptor interaction, multiscale modeling, nonlinear differential equation
1	Byungkwon Kang, Yoojin Jang, Insung Ihm	Animation of chemically reactive fluids using a hybrid simulation method.	Symposium on Computer Animation	2007	DBLP DOI BibTeX RDF
1	Federica Ciocchetta, Jane Hillston, Martin Kos, David Tollervey	Modelling Yeast Pre-rRNA Processing.	CMSB	2007	DBLP DOI BibTeX RDF
1	G. Fibich, I. Gannot, A. Hammer, S. Schochet	Chemical Kinetics on Surfaces: A Singular Limit of a Reaction-Diffusion System.	SIAM J. Math. Analysis	2006	DBLP DOI BibTeX RDF
1	Samuel A. Isaacson, Charles S. Peskin	Incorporating Diffusion in Complex Geometries into Stochastic Chemical Kinetics Simulations.	SIAM J. Scientific Computing	2006	DBLP DOI BibTeX RDF
1	Paola Lecca	A time-dependent extension of gillespie algorithm for biochemical stochastic pi-calculus.	SAC	2006	DBLP DOI BibTeX RDF	biochemical systems modeling, chemical kinetics simulation, gillespie algorithm, passive transport, stochastic ?-calculus
1	Paola Belardini, Claudio Bertoli, Stefania Corsaro, Pasqua D'Ambra	Introducing Combustion-Turbulence Interaction in Parallel Simulation of Diesel Engines.	HPCC	2006	DBLP DOI BibTeX RDF
1	Stelios Rigopoulos	Reduced Flame Kinetics Via Rate-Controlled Constrained Equilibrium.	International Conference on Computational Science	2006	DBLP DOI BibTeX RDF
1	Lionel Elliott, Derek B. Ingham, Adrian G. Kyne, Nicolae S. Mera, Mohamed Pourkashanian, Christopher W. Wilson	The use of ignition delay time in genetic algorithms optimisation of chemical kinetics reaction mechanisms.	Eng. Appl. of AI	2005	DBLP DOI BibTeX RDF
1	Pascal Redou, Sébastien Kerdélo, Christophe Le Gal, Gabriel Querrec, Vincent Rodin, Jean François Abgrall, Jacques Tisseau	Reaction-Agents: First Mathematical Validation of a Multi-agent System for Dynamical Biochemical Kinetics.	EPIA	2005	DBLP DOI BibTeX RDF
1	Paola Belardini, Claudio Bertoli, Stefania Corsaro, Pasqua D'Ambra	The Impact of Different Stiff ODE Solvers in Parallel Simulation of Diesel Combustion.	HPCC	2005	DBLP DOI BibTeX RDF
1	Ralf Deiterding	Detonation Structure Simulation with AMROC.	HPCC	2005	DBLP DOI BibTeX RDF
1	Bartosz Kuczewski, Przemyslaw Baranowski, Dariusz Ucinski	Parallel Processing in Discrimination Between Models of Dynamic Systems.	PPAM	2005	DBLP DOI BibTeX RDF
1	Ioannis P. Androulakis	"Store and retrieve" representations of dynamic systems motivated by studies in gas phase chemical kinetics.	Computers & Chemical Engineering	2004	DBLP DOI BibTeX RDF
1	John A. Rose, Akira Suyama	Physical modeling of biomolecular computers: Models, limitations, and experimental validation.	Natural Computing	2004	DBLP DOI BibTeX RDF	DNA strand design, molecular mechanics, statistical thermodynamics, biomolecular computing, kinetics, DNA-based computing
1	Marcel O. Vlad, John Ross, Federico Moran, Yoel Rodriguez	Delayed Response in Tracer Experiments and Fragment-Carrier Approach to Transit Time Distributions in Nonlinear Chemical kinetics.	I. J. Bifurcation and Chaos	2002	DBLP DOI BibTeX RDF
1	Marc Lange	Investigation of Turbulent Flame Kernels Using DNS on Clusters.	VECPAR	2002	DBLP DOI BibTeX RDF
1	Anders Broe Bendtsen, Peter Glarborg, Kim Dam-Johansen	Visualization Methods in Analysis of Detailed Chemical Kinetics Modelling.	Computers & Chemistry	2001	DBLP DOI BibTeX RDF
1	Alexander V. Bogdanov, Elena N. Stankova	The Use of Intrinsic Properties of Physical System for Derivation of High-Performance Computational Algorithms.	HPCN	2001	DBLP DOI BibTeX RDF
1	H. Labro, B. Maheu, A. Garo	Applicability of the Homotopy Method to the determination of fixed points in chemical kinetics models.	Applied Mathematics and Computation	2000	DBLP DOI BibTeX RDF
1	Paul G. Seybold, Lemont B. Kier, Chao-Kung Cheng	Simulation of First-Order Chemical Kinetics Using Cellular Automata.	Journal of Chemical Information and Computer Sciences	1997	DBLP DOI BibTeX RDF
1	Andrew V. Zeigarnik, Oleg N. Temkin, Danail Bonchev	Application of Graph Theory to Chemical Kinetics, 3. Topological Specificity of Multiroute Reaction Mechanisms.	Journal of Chemical Information and Computer Sciences	1996	DBLP DOI BibTeX RDF
1	Oleg N. Temkin, Andrew V. Zeigarnik, Danail Bonchev	Application of Graph Theory to Chemical Kinetics, Part 2. Topological Specificity of Single-Route Reaction Mechanisms.	Journal of Chemical Information and Computer Sciences	1995	DBLP BibTeX RDF
1	Kazuo Hosokawa, Isao Shimoyama, Hirofumi Miura	Dynamics of Self-Assembling Systems: Analogy with Chemical Kinetics.	Artificial Life	1994	DBLP DOI BibTeX RDF
1	John N. Shadid, Scott Hutchinson, Harry Moffat, Gary L. Hennigan, Bruce Hendrickson, Robert W. Leland	A 65+ Gflops/s unstructured finite element simulation of chemically reacting flows on the Intel Paragon.	SC	1994	DBLP BibTeX RDF
1	N. E. Hurlburt, L. W. Anacker, R. Kopelman	Visualizing Chemical Kinetics in Fractal Domains.	IEEE Visualization	1991	DBLP DOI BibTeX RDF
1	Herbert Melenk, H. Michael Möller, Winfried Neun	Symbolic solution of large stationary chemical kinetics problems.	IMPACT Comput. Sci. Eng.	1989	DBLP DOI BibTeX RDF
1	Brian J. Mulvaney, Walter B. Richardson, Timothy L. Crandle	PEPPER-a process simulator for VLSI.	IEEE Trans. on CAD of Integrated Circuits and Systems	1989	DBLP DOI BibTeX RDF