Search results for "gene"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
5	Jens Stoye, Roland Wittler	A Unified Approach for Reconstructing Ancient Gene Clusters.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	gene order, gene cluster reconstruction, consistency, phylogeny, Comparative genomics, parsimony, gene cluster
5	F. B. Yilmaz, H. Öktem, G.-W. Weber	Mathematical Modeling and Approximation of Gene Expression Patterns.	OR	2004	DBLP DOI BibTeX RDF	Optimization, Inference, Dynamical Systems, Mathematical Modeling, Gene Expression, Gene Regulation, Gene Network
5	Webb Miller, Ahmed Elsherbini, Jamie Peck, Cathy Riemer, Scott Schwartz, Nikola Stojanovic, Ross C. Hardison	A database for globin gene expression data.	HICSS	1995	DBLP DOI BibTeX RDF	globin gene expression database, prototype database, /spl beta/-like globin gene cluster, mammals, globin gene biologists, sequence-analysis problems, e-mail server, highly conserved regions, run sequence features, World-Wide Web server, annotated alignment, database management systems, query languages, experimental results, sequence alignments, regulation, electronic mail, genetics, biology computing, information networks, data repository, graphical presentations
4	Jinlian Wang, Jian Zhang, Lin Li	A Method for Modeling Gene Regulatory Network with Personal Computer Cluster.	ICIC	2009	DBLP DOI BibTeX RDF	colon cancer, graph coloring, gene regulatory network, computer cluster, gene expression profile
4	Akther Shermin, Mehmet A. Orgun	Using dynamic bayesian networks to infer gene regulatory networks from expression profiles.	SAC	2009	DBLP DOI BibTeX RDF	gene expression, dynamic bayesian network, gene regulatory network, cell cycle
4	Darong Lai, Hongtao Lu, Mario Lauria, Diego di Bernardo, Christine Nardini	MANIA: A Gene Network Reverse Algorithm for Compounds Mode-of-Action and Genes Interactions Inference.	Complex	2009	DBLP DOI BibTeX RDF	Ordinary Differential Equations (ODE), compound mode-of-action, reverse engineering, gene expression, gene network
4	Biing-Feng Wang, Shang-Ju Liu, Chien-Hsin Lin	Improved Algorithms for the Gene Team Problem.	COCOA	2009	DBLP DOI BibTeX RDF	conserved gene clusters, gene teams, algorithms, bioinformatics, comparative genomics
4	Catia M. Machado, Hugo P. Bastos, Francisco M. Couto	GREAT: Gene Regulation EvAluation Tool.	IWANN	2009	DBLP DOI BibTeX RDF	Saccharomyces cerevisiae, text mining, Gene Ontology, gene regulations
4	Xin Jin, Anbang Xu, Rongfang Bie	Cancer classification from serial analysis of gene expression with event models.	Appl. Intell.	2008	DBLP DOI BibTeX RDF	Serial analysis of gene expression (SAGE), Gene selection, Cancer classification, Event models
4	Sebastian Fröhler, Stefan Kramer	Inductive logic programming for gene regulation prediction.	Machine Learning	2008	DBLP DOI BibTeX RDF	Gene expression, Inductive logic programming, Systems biology, Relational learning, Gene regulation
4	Arpad Kelemen, Yulan Liang, Athanasios V. Vasilakos	Review of Computational Intelligence for Gene-Gene and Gene-Environment Interactions in Disease Mapping.	Computational Intelligence in Medical Informatics	2008	DBLP DOI BibTeX RDF	Complex common diseases, Gene-gene interactions, Gene-environment interactions, Computational intelligence, SNP, Haplotype
4	Michalis E. Blazadonakis, Michalis E. Zervakis	Revealing Significant Biological Knowledge via Gene Ontologies and Pathways.	BMEI	2008	DBLP DOI BibTeX RDF	Marker Selection, Gene Signature, Survival Prediction, Gene Ontologies, DNA microarray, Pathways
4	Chunhou Zheng, Lei Zhang 0006, Bo Li, Min Xu	Gene Expression Data Classification Using Independent Variable Group Analysis.	ISNN	2008	DBLP DOI BibTeX RDF	Independent variable group analysis, Classification, Gene expression data, Gene selection
4	Anurag Nagar, Hisham Al-Mubaid	A New Path Length Measure Based on GO for Gene Similarity with Evaluation using SGD Pathways.	CBMS	2008	DBLP DOI BibTeX RDF	Gene similarity, GO term similarity, Gene Similarity in SGD
4	Alexandros Kanterakis, Dimitris Kafetzopoulos, Vassilis Moustakis, George Potamias	Mining Gene Expression Profiles and Gene Regulatory Networks: Identification of Phenotype-Specific Molecular Mechanisms.	SETN	2008	DBLP DOI BibTeX RDF	Bresat cancer, Data mining, Bioinformatics, Microarrays, Gene regulatory networks, gene expression profiling, Biomedical informatics
4	Osamu Hirose, Ryo Yoshida, Rui Yamaguchi, Seiya Imoto, Tomoyuki Higuchi, Satoru Miyano	Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models.	Asia International Conference on Modelling and Simulation	2008	DBLP DOI BibTeX RDF	time course gene expression data, technical and biological replicates, state space model, gene networks
4	Igor F. Tsigelny, Valentina Kouznetsova, Sanjay K. Nigam	Swarm intelligence of gene networks leads to behavioral rules for biological cells to serve as agents for higher level tissue and organ development.	CSTST	2008	DBLP DOI BibTeX RDF	organ development, swarm intelligence, cells, gene networks, gene
4	Siqing Xue, Jie Wu	Gene Expression Programming Based on Subexpression Library and Clonal Selection.	ISICA	2008	DBLP DOI BibTeX RDF	gene library, best subexpression, gene expression programming, clonal selection
4	Jane Synnergren, Björn Olsson, Jonas Gamalielsson	A data integration method for exploring gene regulatory mechanisms.	DTMBIO	2008	DBLP DOI BibTeX RDF	data integration, data fusion, gene expression, motifs, gene regulation
4	Sung-Bae Cho, Hong-Hee Won	Cancer classification using ensemble of neural networks with multiple significant gene subsets.	Appl. Intell.	2007	DBLP DOI BibTeX RDF	Multiple significant gene subsets, Gene expression data, DNA microarray, Ensemble classifier, Cancer classification
4	Yuchun Tang, Yan-Qing Zhang, Zhen Huang	Development of Two-Stage SVM-RFE Gene Selection Strategy for Microarray Expression Data Analysis.	IEEE/ACM Trans. Comput. Biology Bioinform.	2007	DBLP DOI BibTeX RDF	Microarray Gene Expression Data Analysis, Recursive Feature Elimination, Support Vector Machines, Feature Selection, Bioinformatics, Gene Selection, Cancer Classification
4	Kuan-Ming Lin, Jaewoo Kang	Exploiting inter-gene information for microarray data integration.	SAC	2007	DBLP DOI BibTeX RDF	biological data integration, biomarker identification, gene interrelation, microarray analysis, gene clustering
4	Ranajit Das, Sushmita Mitra, Haider Banka, Subhasis Mukhopadhyay	Evolutionary Biclustering with Correlation for Gene Interaction Networks.	PReMI	2007	DBLP DOI BibTeX RDF	transcriptional regulatory network extraction, gene interaction network, Bioinformatics, gene expression profile
4	Pramod K. Gupta, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Satoru Miyano	Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data.	ISBRA	2007	DBLP DOI BibTeX RDF	Statistical Meta-Analysis, Fisher’s Exact Test, Gene Expression Data, Gene Ontology
4	Chaolin Zhang, Xuesong Lu, Xuegong Zhang	Significance of Gene Ranking for Classification of Microarray Samples.	IEEE/ACM Trans. Comput. Biology Bioinform.	2006	DBLP DOI BibTeX RDF	Significance of gene ranking, classification, gene selection, microarray data analysis
4	Chunmei Yang, Baikun Wan, Xiaofeng Gao	Effectivity of Internal Validation Techniques for Gene Clustering.	ISBMDA	2006	DBLP DOI BibTeX RDF	internal validation measure, gene expression data, cluster validation, gene clustering
4	Chung-Wein Lee, Shuyu Dan Li, Eric W. Su, Birong Liao	Identification of Phenotype-Defining Gene Signatures Using the Gene-Pair Matrix Based Clustering.	VDMB	2006	DBLP DOI BibTeX RDF	Gene Pair, phenotype-defining gene signa-tures, lymphomas and adenocarcinoma, hierarchical clustering
4	Lijuan Zhang, Zhoujun Li	Gene Selection for Classifying Microarray Data Using Grey Relation Analysis.	Discovery Science	2006	DBLP DOI BibTeX RDF	gene ranking, gene selection, grey relational analysis
4	Xiaohua Hu, Xiaodan Zhang, Xiaohua Zhou	Integration of cluster ensemble and EM based text mining for microarray gene cluster identification and annotation.	CIKM	2006	DBLP DOI BibTeX RDF	gene cluster annotation, gene cluster identification, text mining, summarization, EM, cluster ensemble
4	Wai-Ho Au, Keith C. C. Chan, Andrew K. C. Wong, Yang Wang 0007	Attribute Clustering for Grouping, Selection, and Classification of Gene Expression Data.	IEEE/ACM Trans. Comput. Biology Bioinform.	2005	DBLP DOI BibTeX RDF	attribute clustering, gene expression classification, Data mining, gene selection, microarray analysis
4	Ed Keedwell, Ajit Narayanan	Discovering Gene Networks with a Neural-Genetic Hybrid.	IEEE/ACM Trans. Comput. Biology Bioinform.	2005	DBLP DOI BibTeX RDF	gene interactions, genetic algorithms, neural networks, reverse-engineering, Gene expression analysis
4	Pankaj Kankar, Sougata Mukherjea	Text-based summarization and visualization of gene clusters.	SAC	2005	DBLP DOI BibTeX RDF	biological text mining, gene cluster summarization, gene similarity visualization, microarray analysis
4	Alan Wee-Chung Liew, Lap Keung Szeto, Sy-sen Tang, Hong Yan, Mengsu Yang	A Computational Approach to Gene Expression Data Extraction and Analysis.	VLSI Signal Processing	2004	DBLP DOI BibTeX RDF	microarray image segmentation, gene expression clustering, binary hierarchical clustering, tree visualization, cDNA microarray, gene expression data analysis
4	Alfred O. Hero, Gilles Fleury	Pareto-Optimal Methods for Gene Ranking.	VLSI Signal Processing	2004	DBLP DOI BibTeX RDF	gene filtering, gene screening, multicriterion scattergram, posterior Pareto fronts, data mining
4	Jinze Liu, Wei Wang 0010, Jiong Yang	Gene Ontology Friendly Biclustering of Expression Profiles.	CSB	2004	DBLP DOI BibTeX RDF	Tendency Preserving, Gene Ontology, Biclustering, Gene expression profiles
4	Xin He, Michael H. Goldwasser	Identifying conserved gene clusters in the presence of orthologous groups.	RECOMB	2004	DBLP DOI BibTeX RDF	clusters of orthologous genes, conserved gene clusters, gene teams, bioinformatics, comparative genomics
4	Michael T. Hallett, Jens Lagergren, Ali Tofigh	Simultaneous identification of duplications and lateral transfers.	RECOMB	2004	DBLP DOI BibTeX RDF	gene loss, lateral gene transfer, gene duplication
4	Soumya Raychaudhuri, Hinrich Schütze, Russ B. Altman	Inclusion of Textual Documentation in the Analysis of Multidimensional Data Sets: Application to Gene Expression Data.	Machine Learning	2003	DBLP DOI BibTeX RDF	gene annotation, natural language processing, bioinformatics, text analysis, gene expression analysis, functional genomics
4	Jijun Tang, Bernard M. E. Moret	Phylogenetic Reconstruction from Gene-Rearrangement Data with Unequal Gene Content.	WADS	2003	DBLP DOI BibTeX RDF	gene-order data, whole-genome data, Hannenhalli-Pevzner theory, inversion distance, reversal distance, experimental assessment, lower bounds, Computational biology, edit distance, gene duplications, phylogenetic reconstruction, signed permutations
3	Weiguo Sheng, Allan Tucker, Xiaohui Liu	A niching genetic k-means algorithm and its applications to gene expression data.	Soft Comput.	2010	DBLP DOI BibTeX RDF	Niching methods, Genetic algorithms, Clustering, K-means, Gene expression
3	Martin Trefzer, Tüze Kuyucu, Julian F. Miller, Andy M. Tyrrell	Image compression of natural images using artificial gene regulatory networks.	GECCO	2010	DBLP DOI BibTeX RDF	artificial developmental system, gci, grn, evolutionary computation, image compression, gene regulatory network, artificial development, ads
3	Dean Cheng, John Sheldon, Marcelo Marcet-Palacios, Osmar R. Zaïane	PROM-OOGLE: data mining and integration of on-line databases to discover gene promoters.	SAC	2010	DBLP DOI BibTeX RDF	biomedical database integration, gene promoter analysis
3	Hao Yang, Bo Xu	The Research on the Heredity of Family Firm Gene in China.	WKDD	2010	DBLP DOI BibTeX RDF	corporate gene, family firm, genetic gene
3	Xiaosong Han, Xinhua Lu, Chunguo Wu, Yanchun Liang	Gene Expression Regulation in E-Cell Model Analog-Cell.	FCST	2010	DBLP DOI BibTeX RDF	Bioinfromatics, A Life, E-Cell, Gene Expression Regulation, Gene Expression
3	Hanifi Çanakçi, Adil Baykasoglu, Hamza Güllü	Prediction of compressive and tensile strength of Gaziantep basalts via neural networks and gene expression programming.	Neural Computing and Applications	2009	DBLP DOI BibTeX RDF	Basalt, Tensile and compressive strength, Artificial neural networks, Gene expression programming
3	Lars Arvestad, Jens Lagergren, Bengt Sennblad	The gene evolution model and computing its associated probabilities.	J. ACM	2009	DBLP DOI BibTeX RDF	probability, evolution, Phylogeny, duplication, reconciliation, loss, gene
3	Topon Kumar Paul, Hitoshi Iba	Prediction of Cancer Class with Majority Voting Genetic Programming Classifier Using Gene Expression Data.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	data mining, feature extraction, gene expression, majority voting, Classifier design and evaluation, evolutionary computing and genetic algorithm
3	Zidong Wang, Xiaohui Liu, Yurong Liu, Jinling Liang, Veronica Vinciotti	An Extended Kalman Filtering Approach to Modeling Nonlinear Dynamic Gene Regulatory Networks via Short Gene Expression Time Series.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	DNA microarray technology, clustering, Modeling, gene expression, time series data, extended Kalman filtering
3	Matthieu Vignes, Florence Forbes	Gene Clustering via Integrated Markov Models Combining Individual and Pairwise Features.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	Markov random fields, gene expression, model-based clustering, metabolic networks
3	Jianmin Ma, Minh Ngoc Nguyen 0002, Jagath C. Rajapakse	Gene Classification Using Codon Usage and Support Vector Machines.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	codon usage bias, gene classification, Human Leukocyte Antigen (HLA), Major Histocompatibility Complex (MHC), Relative Synonymous Codon Use (RSCU) frequency, Cluster analysis
3	Mukul S. Bansal, Oliver Eulenstein, André Wehe	The Gene-Duplication Problem: Near-Linear Time Algorithms for NNI-Based Local Searches.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	Computational phylogenetics, {tt NNI}, local search, gene-duplication, supertrees
3	Qian Zhu, Zaky Adam, Vicky Choi, David Sankoff	Generalized Gene Adjacencies, Graph Bandwidth, and Clusters in Yeast Evolution.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	graph bandwidth, Saccharomyces cerevisiae, Candida glabrata, Ashbya gossypii, Kluyveromyces waltii, Kluyveromyces lactis, dynamic programming, evolution, phylogeny, Comparative genomics, genome rearrangements, gene clusters, yeast
3	Gunther H. Weber, Oliver Rübel, Min-Yu Huang, Angela H. DePace, Charless C. Fowlkes, Soile V. E. Keränen, Cris L. Luengo Hendriks, Hans Hagen, David W. Knowles, Jitendra Malik, Mark D. Biggin, Bernd Hamann	Visual Exploration of Three-Dimensional Gene Expression Using Physical Views and Linked Abstract Views.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	three-dimensional gene expression, spatial expression patterns, physical views, multiple linked views, visualization, information visualization, brushing, Interactive data exploration, scatter plots
3	Naoto Yukinawa, Shigeyuki Oba, Kikuya Kato, Shin Ishii	Optimal Aggregation of Binary Classifiers for Multiclass Cancer Diagnosis Using Gene Expression Profiles.	IEEE/ACM Trans. Comput. Biology Bioinform.	2009	DBLP DOI BibTeX RDF	cancer diagnosis, gene expression profiling, Multiclass classification, error correcting output coding
3	Jose Garcia Moreno-Torres, Xavier Llorà, David E. Goldberg	Binary representation in gene expression programming: towards a better scalability.	GECCO	2009	DBLP DOI BibTeX RDF	genetic algorithms, machine learning, classifier systems, gene expression programming
3	Ruochen Liu, Zhengchun Sheng, Licheng Jiao	Gene transposon based clonal selection algorithm for clustering.	GECCO	2009	DBLP DOI BibTeX RDF	clone selection algorithm, gene transposon, pbm index, clustering
3	Béatrice Duval, Jin-Kao Hao, Jose Crispin Hernandez Hernandez	A memetic algorithm for gene selection and molecular classification of cancer.	GECCO	2009	DBLP DOI BibTeX RDF	specialized crossover, classification, local search, memetic algorithm, gene selection
3	Feng Wang, Zhiyi Lin, Cheng Yang, Yuanxiang Li	SGMIEC: using selfish gene theory to construct mutualinformation and entropy based cluster for optimization.	GECCO	2009	DBLP DOI BibTeX RDF	selfish gene theory, mutual information, estimation of distribution algorithms
3	Kyriakos Kentzoglanakis, Matthew Poole	Gene network inference using a swarm intelligence framework.	GECCO (Companion)	2009	DBLP DOI BibTeX RDF	particle swarm optimization, swarm intelligence, ant colony optimization, inference, gene regulatory networks, scale-free
3	Stephen Johns, Marcus V. dos Santos	On the evolution of neural networks for pairwise classification using gene expression programming.	GECCO	2009	DBLP DOI BibTeX RDF	neural networks, classification, neuroevolution, gene expression programming
3	Zhenyu Jia, Yipeng Wang, Kai Ye, Qilan Li, Sha Tang, Shizhong Xu, Dan Mercola	Association Study between Gene Expression and Multiple Relevant Phenotypes with Cluster Analysis.	EvoBIO	2009	DBLP DOI BibTeX RDF	multiple phenotypes, classification, gene expression, Association
3	Yiming Chen, Zhoujun Li, Junwan Liu	Learning Kernel Matrix from Gene Ontology and Annotation Data for Protein Function Prediction.	ISNN	2009	DBLP DOI BibTeX RDF	Diffusion kernel, Gene ontology, Protein function prediction
3	Remi Tassing, Desheng Wang, Yongli Yang, Guangxi Zhu	Gene Sorting in Differential Evolution.	ISNN	2009	DBLP DOI BibTeX RDF	Gene sorting, Global optimization, Differential evolution, Convergence speed
3	Maurizio Fiasché, Anju Verma, Maria Cuzzola, Pasquale Iacopino, Nikola K. Kasabov, Francesco Carlo Morabito	Discovering Diagnostic Gene Targets and Early Diagnosis of Acute GVHD Using Methods of Computational Intelligence over Gene Expression Data.	ICANN	2009	DBLP DOI BibTeX RDF	GVHD, Neural Networks, Machine Learning, Feature Selection, Gene selection, GEP
3	Qiang Luo, Xu Liu, Dongyun Yi	Reconstructing Gene Networks from Microarray Time-Series Data via Granger Causality.	Complex	2009	DBLP DOI BibTeX RDF	partial Granger causality, gene regulatory networks, time series data, projection pursuit
3	Yogesh Singh, Arvinder Kaur, Ruchika Malhotra	Prediction of Software Quality Model Using Gene Expression Programming.	PROFES	2009	DBLP DOI BibTeX RDF	Object-oriented, Metrics, Software Quality, Empirical validation, Gene expression programming, Fault prediction
3	Ahmad Faraj, Sameer Kumar, Brian E. Smith, Amith R. Mamidala, John A. Gunnels, Philip Heidelberger	MPI collective communications on the blue gene/p supercomputer: algorithms and optimizations.	ICS	2009	DBLP DOI BibTeX RDF	communication, collective, mpi, blue gene
3	Ivan Krivosheev, Lei Du, Hongzhi Wang, Shaojun Zhang, Yadong Wang, Xia Li	Global Similarity and Local Variance in Human Gene Coexpression Networks.	AICI	2009	DBLP DOI BibTeX RDF	gene coexpression network interrogation
3	Jakub Kovác, Tomás Vinar, Brona Brejová	Predicting Gene Structures from Multiple RT-PCR Tests.	WABI	2009	DBLP DOI BibTeX RDF	RT-PCR, splicing graph, dynamic programming, NP-completeness, gene finding
3	Ivan G. Costa, Ana Carolina Lorena, Liciana R. M. P. y Peres, Marcílio Carlos Pereira de Souto	Using Supervised Complexity Measures in the Analysis of Cancer Gene Expression Data Sets.	BSB	2009	DBLP DOI BibTeX RDF	Cancer gene expression classification, data set complexity, Machine Learning
3	Salih Tuna, Mahesan Niranjan	Cross-Platform Analysis with Binarized Gene Expression Data.	PRIB	2009	DBLP DOI BibTeX RDF	Cross-platform analysis, binary gene expression, classification
3	Jisheng Dai, Chunqi Chang, Zhongfu Ye, Yeung Sam Hung	An Efficient Convex Nonnegative Network Component Analysis for Gene Regulatory Network Reconstruction.	PRIB	2009	DBLP DOI BibTeX RDF	network component analysis, positivity constraints, microarray, Gene regulatory network, convex programming
3	Afolabi Olomola, Sumeet Dua	Bi-clustering of Gene Expression Data Using Conditional Entropy.	PRIB	2009	DBLP DOI BibTeX RDF	Gene expression, biclustering, conditional entropy
3	Ramesh Ram, Madhu Chetty	MCMC Based Bayesian Inference for Modeling Gene Networks.	PRIB	2009	DBLP DOI BibTeX RDF	Bayesian network, parameter estimation, gene expression, MCMC
3	Numanul Subhani, Alioune Ngom, Luis Rueda, Conrad J. Burden	Microarray Time-Series Data Clustering via Multiple Alignment of Gene Expression Profiles.	PRIB	2009	DBLP DOI BibTeX RDF	Profile Alignment, Microarrays, k-Means Clustering, Time-Series Data, Cubic Spline, Gene Expression Profiles
3	Henryk Maciejewski, Piotr Twaróg	Model Instability in Microarray Gene Expression Class Prediction Studies.	EUROCAST	2009	DBLP DOI BibTeX RDF	gene expression microarrays, expected prediction error, cross-validation, Class prediction
3	Peter E. Larsen, Yang Dai	Using Gene Expression Modeling to Determine Biological Relevance of Putative Regulatory Networks.	ISBRA	2009	DBLP DOI BibTeX RDF	expression modeling network, Gene expression, least-squares, linear model, regulatory network
3	Cheng Yang, Yuanxiang Li, Zhiyi Lin	SGEGC: A Selfish Gene Theory Based Optimization Method by Exchanging Genetic Components.	ISICA	2009	DBLP DOI BibTeX RDF	Selfish Gene Theory, Nonlinearity Check, Estimation of Distribution Algorithms
3	Lei Duan, Changjie Tang, Liang Tang, Tianqing Zhang, Jie Zuo	Mining Class Contrast Functions by Gene Expression Programming.	ADMA	2009	DBLP DOI BibTeX RDF	Contrast Mining, Data Mining, Gene Expression Programming
3	Liangxiu Han, Jano I. van Hemert, Richard A. Baldock, Malcolm P. Atkinson	Automating Gene Expression Annotation for Mouse Embryo.	ADMA	2009	DBLP DOI BibTeX RDF	Mouse Embryo, Pattern Recognition, Wavelet Transform, Gene Expression
3	Sara C. Madeira, Arlindo L. Oliveira	Efficient Biclustering Algorithms for Time Series Gene Expression Data Analysis.	IWANN	2009	DBLP DOI BibTeX RDF	gene expression time series, temporal expression patterns, anticorrelated time-lagged patterns, regulatory modules, Biclustering
3	Mohd Saberi Mohamad, Sigeru Omatu, Safaai Deris, Michifumi Yoshioka	An Iterative GASVM-Based Method: Gene Selection and Classification of Microarray Data.	IWANN	2009	DBLP DOI BibTeX RDF	genetic algorithm, iterative method, Gene selection, microarray data, hybrid approach
3	Kazuhiro Seki, Yoshihiro Kino, Kuniaki Uehara	Gene Functional Annotation with Dynamic Hierarchical Classification Guided by Orthologs.	Discovery Science	2009	DBLP DOI BibTeX RDF	Information retrieval, String matching, Gene ontology
3	Philip M. R. Tedder, James R. Bradford, Chris J. Needham, Glenn A. McConkey, Andrew J. Bulpitt, David R. Westhead	Bayesian Data Integration and Enrichment Analysis for Predicting Gene Function in Malaria.	CiE	2009	DBLP DOI BibTeX RDF	Plasmodium falciparum, gene function prediction, machine learning, heterogeneous data sources, Bayes classifier, malaria
3	Shuiwang Ji, Lei Yuan, Ying-Xin Li, Zhi-Hua Zhou, Sudhir Kumar, Jieping Ye	Drosophila gene expression pattern annotation using sparse features and term-term interactions.	KDD	2009	DBLP DOI BibTeX RDF	gene expression pattern, sparse learning, regularization, image annotation, bag-of-words
3	Dan Hu, Jinglian Gao	Semantic Genes and the Semantic Composition of Adjectives in Modern Chinese.	IALP	2009	DBLP DOI BibTeX RDF	semantic gene, semantic composition of adjective, core semantic gene, attribute semantic gene
3	Rónán Daly, Kieron D. Edwards, John S. O'Neill, J. Stuart Aitken, Andrew J. Millar, Mark A. Girolami	Using Higher-Order Dynamic Bayesian Networks to Model Periodic Data from the Circadian Clock of Arabidopsis Thaliana.	PRIB	2009	DBLP DOI BibTeX RDF	Arabidopsis Thaliana, Gene Expression, Dynamic Bayesian Network, Gene Regulatory Network
3	Keith Harris, Lisa McMillan, Mark A. Girolami	Inferring Meta-covariates in Classification.	PRIB	2009	DBLP DOI BibTeX RDF	clustering, classification, EM algorithm, Gene selection, Gene Ontology
3	Artiom Alhazov, Ion Petre, Vladimir Rogojin	Solutions to computational problems through gene assembly.	Natural Computing	2008	DBLP DOI BibTeX RDF	Stichotrichous, Gene assembly, Intramolecular model, Ciliate-based computing, DNA computing, Hamiltonian path problem, Ciliates
3	Shutao Li, Xixian Wu, Mingkui Tan	Gene selection using hybrid particle swarm optimization and genetic algorithm.	Soft Comput.	2008	DBLP DOI BibTeX RDF	Genetic algorithm, Support vector machine, Particle swarm optimization, Gene selection
3	Tero Harju, Chang Li, Ion Petre	Parallel complexity of signed graphs for gene assembly in ciliates.	Soft Comput.	2008	DBLP DOI BibTeX RDF	Gene assembly, Complexity, Parallelism, Graph model, Ciliates
3	Jieping Ye, Jianhui Chen, Ravi Janardan, Sudhir Kumar	Developmental stage annotation of Drosophila gene expression pattern images via an entire solution path for LDA.	TKDD	2008	DBLP DOI BibTeX RDF	Gene expression pattern image, dimensionality reduction, linear discriminant analysis, linear regression
3	Luo Si, Danni Yu, Daisuke Kihara, Yi Fang	Combining gene sequence similarity and textual information for gene function annotation in the literature.	Inf. Retr.	2008	DBLP DOI BibTeX RDF	Biomedical literature mining, Gene function annotation, Combination of multiple evidence
3	Li Teng, Laiwan Chan	Discovering Biclusters by Iteratively Sorting with Weighted Correlation Coefficient in Gene Expression Data.	Signal Processing Systems	2008	DBLP DOI BibTeX RDF	weighted correlation coefficient, gene expression data, biclustering, microarray data
3	Zhaohui Gan, Tommy W. S. Chow, D. Huang	Effective Gene Selection Method Using Bayesian Discriminant Based Criterion and Genetic Algorithms.	Signal Processing Systems	2008	DBLP DOI BibTeX RDF	sequential forward search, genetic algorithms, feature selection, gene selection
3	Robin Kramer, Dong Xu	Projecting Gene Expression Trajectories through Inducing Differential Equations from Microarray Time Series Experiments.	Signal Processing Systems	2008	DBLP DOI BibTeX RDF	dynamic trajectory, time series, singular value decomposition, microarray, gene expression, differential equation
3	Riccardo Boscolo, James C. Liao, Vwani P. Roychowdhury	An Information Theoretic Exploratory Method for Learning Patterns of Conditional Gene Coexpression from Microarray Data.	IEEE/ACM Trans. Comput. Biology Bioinform.	2008	DBLP DOI BibTeX RDF	Co-information, Entropy, Information theory, Statistical analysis, Gene expression data
3	Mukul S. Bansal, Oliver Eulenstein	An Omega(n^2/ log n) Speed-Up of TBR Heuristics for the Gene-Duplication Problem.	IEEE/ACM Trans. Comput. Biology Bioinform.	2008	DBLP DOI BibTeX RDF	Algorithms, Computational Biology, Phylogenetics, Gene Duplication, Supertrees
3	Muhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence Dooley	Gene Expression Imputation Techniques for Robust Post Genomic Knowledge Discovery.	Computational Intelligence in Medical Informatics	2008	DBLP DOI BibTeX RDF	Microarray Gene Expression Data, Missing Values Estimaiton, Post Genomic Knowledge Discovery
3	Muhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence Dooley	Computational Modelling Strategies for Gene Regulatory Network Reconstruction.	Computational Intelligence in Medical Informatics	2008	DBLP DOI BibTeX RDF	Computational Intelligence Methods for GRN Modelling, Stochastic Modelling, Gene Regulatory Networks, Deterministic Modelling