Search results for "proteins"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
4	Herbert Edelsbrunner, Michael A. Facello, Ping Fu, Jie Liang	Measuring proteins and voids in proteins.	HICSS	1995	DBLP DOI BibTeX RDF	protein voids, space filling diagram, solvent accessible surface, metric properties, empty space, surface area contributions, 3-dimensional alpha complexes, inclusion-exclusion formulas, three dimensional alpha complexes, computational geometry, geometric models, diagrams, biology computing, proteins, proteins, chemistry, volume, chemistry computing, molecular surface, molecules, surface area
4	Valentina Di Francesco, Peter J. Munson, Jean Garnier	Use of multiple alignments in protein secondary structure prediction.	HICSS	1995	DBLP DOI BibTeX RDF	training datasets, homologous proteins, well-characterized prediction methods, jury method, quadratic-logistic method, related proteins, three state prediction, consensus predictions, gap-permissive positions, coil state, reduced noise, database, profiling, database management systems, COMBINE, biology computing, proteins, chemistry, secondary structure, prediction accuracy, chemistry computing, averaging, protein secondary structure prediction, multiple alignments
3	Cao Wei, Kazuya Sumikoshi, Tohru Terada, Shugo Nakamura, Katsuhiko Kitamoto, Kentaro Shimizu	Computational Protocol for Screening GPI-anchored Proteins.	BICoB	2009	DBLP DOI BibTeX RDF	GPI-anchored Proteins, Post-translational modification, SVM
3	C. Grills, D. A. Fennell, S. F. C. Shearer	Markov Modelling of Mitochondrial BAK Activation Kinetics during Apoptosis.	SAGA	2009	DBLP DOI BibTeX RDF	BAK activation kinetics, BH3-only proteins, BCL-2 family proteins, agonism model, derepressor model, apoptosis
3	M. Michael Gromiha, Liang-Tsung Huang, Lien Fu Lai	Sequence Based Prediction of Protein Mutant Stability and Discrimination of Thermophilic Proteins.	PRIB	2008	DBLP DOI BibTeX RDF	Protein stability, thermophilic proteins, neural network, prediction, discrimination, rule generator, machine learning techniques
3	Karen T. Girão, Fátima C. E. Oliveira, Kaio M. Farias, Italo M. C. Maia, Samara C. Silva, Carla R. F. Gadelha, Laura D. G. Carneiro, Ana Carolina L. Pacheco, Michel T. Kamimura, Michely C. Diniz, Maria C. Silva, Diana M. Oliveira	Multi-relational Data Mining for Tetratricopeptide Repeats (TPR)-Like Superfamily Members in Leishmania spp.: Acting-by-Connecting Proteins.	PRIB	2008	DBLP DOI BibTeX RDF	tetratricopeptide repeat motif, Leishmania proteins, hidden Markov models, Viterbi algorithm, Multi-relational data mining
3	Pengfei Han, Xiuzhen Zhang, Raymond S. Norton, Zhi-Ping Feng	Reducing Overfitting in Predicting Intrinsically Unstructured Proteins.	PAKDD	2007	DBLP DOI BibTeX RDF	intrinsically unstructured proteins, disordered region, amino acid composition, decision tree, random forest, overfitting
3	Behshad Behzadi, Martin Vingron	Reconstructing Domain Compositions of Ancestral Multi-domain Proteins.	Comparative Genomics	2006	DBLP DOI BibTeX RDF	Evolution of Multidomain proteins, Tree reconciliation
3	Ssu-Hua Huang, Ru-Sheng Liu, Chien-Yu Chen, Ya-Ting Chao, Shu-Yuan Chen	Prediction of Outer Membrane Proteins by Support Vector Machines Using Combinations of Gapped Amino Acid Pair Compositions.	BIBE	2005	DBLP DOI BibTeX RDF	outer membrane protein prediction, ß-barrel membrane proteins, gapped amino acid pair composition, Support Vector Machine
3	Peter J. Bentley	Fractal Proteins.	Genetic Programming and Evolvable Machines	2004	DBLP DOI BibTeX RDF	fractal proteins, scalability, complexity, development, evolvability
3	Gordon M. Crippen	Protein folding potential functions.	HICSS	1995	DBLP DOI BibTeX RDF	macromolecules, potential energy functions, intramolecular mechanics, protein structure recognition problem, globular protein sequence, plausible protein conformations, native conformation, single-chain proteins, nonnative structures, multichain aggregates, disulphide bonds, bound ligands, protein folding, proteins, potential functions, molecular configurations
3	Zhirong Sun, Tom L. Blundell	The pattern of common supersecondary structure (motifs) in protein database.	HICSS	1995	DBLP DOI BibTeX RDF	common supersecondary structure, supersecondary motifs, residue conformation, nonregular structure regions, sequence pattern, database management systems, biology computing, proteins, proteins, motifs, chemistry computing, structure prediction, protein database, homology modelling
2	Michael Stout, Jaume Bacardit, Jonathan D. Hirst, Robert Elliott Smith, Natalio Krasnogor	Prediction of topological contacts in proteins using learning classifier systems.	Soft Comput.	2009	DBLP DOI BibTeX RDF
2	Piotr Berman, Jieun K. Jeong	Consistent Sets of Secondary Structures in Proteins.	Algorithmica	2009	DBLP DOI BibTeX RDF
2	Scott R. McAllister, Christodoulos A. Floudas	Predictive Method for Interhelical Contacts in Alpha-Helical Proteins.	Encyclopedia of Optimization	2009	DBLP DOI BibTeX RDF	Alpha-helical proteins, Protein folding, Mixed-integer linear programming
2	Gianluigi Folino, Fabio Gori, Mike S. M. Jetten, Elena Marchiori	Clustering Metagenome Short Reads Using Weighted Proteins.	EvoBIO	2009	DBLP DOI BibTeX RDF
2	Giuseppe Nicosia, Giovanni Stracquadanio	A Design-for-Yield Algorithm to Assess and Improve the Structural and Energetic Robustness of Proteins and Drugs.	SEA	2009	DBLP DOI BibTeX RDF
2	Takashi Abe, Shigehiko Kanaya, Toshimichi Ikemura	Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated.	WSOM	2009	DBLP DOI BibTeX RDF	batch-learning SOM, oligopeptide frequency, high-performance supercomputer, bioinformatics, protein function
2	Pietro di Lena, Piero Fariselli, Luciano Margara, Marco Vassura, Rita Casadio	On the Upper Bound of the Prediction Accuracy of Residue Contacts in Proteins with Correlated Mutations: The Case Study of the Similarity Matrices.	WABI	2009	DBLP DOI BibTeX RDF
2	Ricardo Cerri, Renato R. O. da Silva, André Carlos Ponce Leon Ferreira de Carvalho	Comparing Methods for Multilabel Classification of Proteins Using Machine Learning Techniques.	BSB	2009	DBLP DOI BibTeX RDF	Machine Learning, Classification, Bioinformatics, Proteins, Multilabel
2	Sibele Borsuk, Fabiana Kommling Seixas, Daniela Fernandes Ramos, Caroline Rizzi, Odir Antonio Dellagostin	Identification of Proteins from Tuberculin Purified Protein Derivative (PPD) with Potential for TB Diagnosis Using Bioinformatics Analysis.	BSB	2009	DBLP DOI BibTeX RDF	bioinformatics analysis, LC-MS/MS, bovine tuberculosis, diagnostic
2	Yu-Yen Ou, Shu-An Chen	Using Efficient RBF Networks to Classify Transport Proteins Based on PSSM Profiles and Biochemical Properties.	IWANN	2009	DBLP DOI BibTeX RDF
2	Uros Midic, A. Keith Dunker, Zoran Obradovic	Protein sequence alignment and structural disorder: a substitution matrix for an extended alphabet.	KDD Workshop on Statistical and Relational Learning in Bioinformatics	2009	DBLP DOI BibTeX RDF	protein sequence alignment, structurally disordered proteins, substitution matrices
2	Alexander Kister	Relationship between Amino Acids Sequences and Protein Structures: Folding Patterns and Sequence Patterns.	ISBRA	2009	DBLP DOI BibTeX RDF	Beta-sandwich proteins, supersecondary structure, protein structure classification, sequence alignment, protein folding, protein structure prediction
2	Hai Song Xu, Wen Ke Ren, Xiao Hui Liu, Xiao Qin Li	ALPHASUM: A Score Matrix Based on Low Identity All-alpha Proteins.	BMEI	2008	DBLP DOI BibTeX RDF	class-specific matrix, Twilight Zone, sequence alignment
2	Greg Paperin	Evolving sequence patterns for prediction of sub-cellular locations of eukaryotic proteins.	GECCO	2008	DBLP DOI BibTeX RDF	classifier learning, protein localisation, genetic algorithm
2	Richard J. B. Dobson, Patricia B. Munroe, Charles A. Mein, Mark J. Caulfield, Mansoor A. S. Saqi	Combining Protein-Protein Interaction (PPI) Network and Sequence Attributes for Predicting Hypertension Related Proteins.	BIRD	2008	DBLP DOI BibTeX RDF
2	Pietro Liò, Matteo Brilli, Renato Fani	Topological Metrics in Blast Data Mining: Plasmid and Nitrogen-Fixing Proteins Case Studies.	BIRD	2008	DBLP DOI BibTeX RDF
2	David E. Shaw	Architectures and algorithms for millisecond-scale molecular dynamics simulations of proteins.	MICRO	2008	DBLP DOI BibTeX RDF
2	Satoshi Koizumi, Keisuke Imada, Tomonobu Ozaki, Takenao Ohkawa	Extraction of Binding Sites in Proteins by Searching for Similar Local Molecular Surfaces.	PRIB	2008	DBLP DOI BibTeX RDF
2	Parameswaran Ramachandran, Wu-Sheng Lu, Andreas Antoniou	Improved hot-spot location technique for proteins using a bandpass notch digital filter.	ISCAS	2008	DBLP DOI BibTeX RDF
2	Hon Nian Chua, Kar Leong Tew, Xiaoli Li, See-Kiong Ng	A Unified Scoring Scheme for Detecting Essential Proteins in Protein Interaction Networks.	ICTAI	2008	DBLP DOI BibTeX RDF
2	Rehab M. Duwairi, Amal Kassawneh	A framework for predicting proteins 3D structures.	AICCSA	2008	DBLP DOI BibTeX RDF
2	Sangyoon Lee	Analysis of Interhelical Angle and Sequential Distance in Proteins.	ICCSA	2008	DBLP DOI BibTeX RDF	interhelical angle, sequential distance, protein, helix
2	Gouchol Pok, Keun Ho Ryu	Co-Occurring Patterns of Amino Acid Physicochemical Properties in Proteins.	WAIM	2008	DBLP DOI BibTeX RDF
2	Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg	Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins.	RECOMB	2008	DBLP DOI BibTeX RDF
2	Andrei N. Lupas	At the Origin of Life: How Did Folded Proteins Evolve?	RECOMB	2008	DBLP DOI BibTeX RDF
2	Abbas Z. Kouzani	Subcellular localisation of proteins in fluorescent microscope images using a random forest.	IJCNN	2008	DBLP DOI BibTeX RDF
2	John Jack, Andrei Paun, Alfonso Rodríguez-Patón	Effects of HIV-1 Proteins on the Fas-Mediated Apoptotic Signaling Cascade: A Computational Study of Latent CD4+ T Cell Activation.	Workshop on Membrane Computing	2008	DBLP DOI BibTeX RDF
2	André O. Falcão, Daniel Faria, António E. N. Ferreira	Peptide programs: applying fragment programs to protein classification.	DTMBIO	2008	DBLP DOI BibTeX RDF	machine learning, classification, bioinformatics, proteins
2	Guillaume Lamoureux	Computational Enzymology: Promises and Challenges.	HPCS	2008	DBLP DOI BibTeX RDF	computational enzymology, protein structure-function relationships, zinc enzymes, transport proteins
2	YuZhong Zhao, Yun Xu, ZhiHao Wang, Changjiang Jin, Xinjiao Gao, Yu Xue, Xuebiao Yao	Proteome-Wide Analysis of Amino Acid Absence in Composition and Plasticity.	ICIC	2008	DBLP DOI BibTeX RDF	post-translational modification, amino acid absence, Keratin-associated proteins, ubiquitination
2	Angela M. Pagano, Sammy D. Pishanider, Susannah Gal	Incorporation and use of modified nucleotides in aqueous DNA computing.	Natural Computing	2008	DBLP DOI BibTeX RDF	Binding proteins, Fluorescent DNA, Modified nucleotides, Satisfiability problems, Antibodies
2	Amarda Shehu, Cecilia Clementi, Lydia E. Kavraki	Sampling Conformation Space to Model Equilibrium Fluctuations in Proteins.	Algorithmica	2007	DBLP DOI BibTeX RDF
2	Vicky Choi, Navin Goyal	An Algorithmic Approach to the Identification of Rigid Domains in Proteins.	Algorithmica	2007	DBLP DOI BibTeX RDF
2	Yuan F. Zheng, Weidong Chen	Mobile robot team forming for crystallization of proteins.	Auton. Robots	2007	DBLP DOI BibTeX RDF	Robot team forming, Protein crystallization, Simplicity and locality, Mobile robots
2	Trias Thireou, Martin Reczko	Bidirectional Long Short-Term Memory Networks for Predicting the Subcellular Localization of Eukaryotic Proteins.	IEEE/ACM Trans. Comput. Biology Bioinform.	2007	DBLP DOI BibTeX RDF	long shortterm memory, protein subcellular localization prediction, recurrent neural networks, biological sequence analysis
2	Guang-Zheng Zhang, Kyungsook Han	Discovering Inter-Domain Paths between Hepatitis C Virus NS5A and Human Liver Proteins.	FBIT	2007	DBLP DOI BibTeX RDF
2	Yu Chen, Guangyu Cui, Kyungsook Han	Multi-Layered Networks for Visualizing the Interactions between Heterogeneous Proteins.	FBIT	2007	DBLP DOI BibTeX RDF
2	Chirag Nepal, Kyungsook Han	Analysis of HCV Envelope Proteins Interacting with Human Proteins.	FBIT	2007	DBLP DOI BibTeX RDF
2	Mohenish Jaiswal, S. R. Mahadeva Prasanna, Latha Rangan	Resonant Recognition Model for Prediction of 'Lead-In Regions' in Proteins.	FBIT	2007	DBLP DOI BibTeX RDF	Catalytic site: lead-in-regions, Protein coding, Resonant recognition model (RRM)
2	Seyed Koosha Golmohammadi, Lukasz A. Kurgan, Brendan Crowley, Marek Reformat	Classification of Cell Membrane Proteins.	FBIT	2007	DBLP DOI BibTeX RDF
2	Kyungsook Han, Byungkyu Park	Comparative Analysis of the Interaction Networks of HIV-1 and Human Proteins.	International Conference on Computational Science	2007	DBLP DOI BibTeX RDF
2	Todd J. Taylor, Iosif I. Vaisman	Discrimination and Classification of Thermophilic and Mesophilic Proteins.	ISVD	2007	DBLP DOI BibTeX RDF
2	Gregory M. Reck, Iosif I. Vaisman	Decoy Discrimination Using Contact Potentials Based on Delaunay Tessellation of Hydrated Proteins.	ISVD	2007	DBLP DOI BibTeX RDF
2	Lei Ji, Hugh Nymeyer, Ashok Srinivasan, Yanan Yu	Data-Driven Time-Parallelization in the AFM Simulation of Proteins.	IPDPS	2007	DBLP DOI BibTeX RDF
2	A. Keith Dunker, Christopher J. Oldfield, Jingwei Meng, Pedro Romero, Jack Y. Yang, Zoran Obradovic, Vladimir N. Uversky	Intrinsically Disordered Proteins: Predictions and Applications.	BIBE	2007	DBLP DOI BibTeX RDF
2	Vladimir N. Uversky, Christopher J. Oldfield, A. Keith Dunker	Intrinsically Disordered Proteins in Human Diseases.	BIBE	2007	DBLP DOI BibTeX RDF
2	Elton J. R. Vasconcelos, Ana Carolina L. Pacheco, Joao J. S. Gouveia, Fabiana F. Araújo, Michely C. Diniz, Michel T. Kamimura, Marcilia P. Costa, Rodrigo Maggioni, Raimundo Araujo-Filho, Raimundo B. Costa, Diana Magalhaes de Oliveira	Profilins, Formins and Katanins as Flagellar Proteins of Leishmania spp.: a Genome-based, Multi-step Bioinformatics-driven Description.	BIBE	2007	DBLP DOI BibTeX RDF
2	Ian MacDonald, George Berg	A Mixture of Experts Method for Predicting Domain Boundaries in Proteins.	BIBE	2007	DBLP DOI BibTeX RDF
2	A. Keith Dunker, Christopher J. Oldfield, Jingwei Meng, Pedro Romero, Jack Y. Yang, Zoran Obradovic, Vladimir N. Uversky	Intrinsically Disordered Proteins: An Update.	BIBE	2007	DBLP DOI BibTeX RDF
2	Suk Hoon Jung, Hee-Young Hur, Desok Kim, Dong-Soo Han	Identification of Conserved Domain Combinations in S.cerevisiae Proteins.	BIBE	2007	DBLP DOI BibTeX RDF
2	Christophe Nicolas Magnan, Cécile Capponi, François Denis	A Protocol to Detect Local Affinities Involved in Proteins Distant Interactions.	BIBM	2007	DBLP DOI BibTeX RDF
2	Pankaj Kumar, Vaidyanathan K. Jayaraman, Bhaskar D. Kulkarni	Granular Support Vector Machine Based Method for Prediction of Solubility of Proteins on Overexpression in Escherichia Coli.	PReMI	2007	DBLP DOI BibTeX RDF
2	Marco Wiltgen, Andreas Holzinger, Gernot P. Tilz	Interactive Analysis and Visualization of Macromolecular Interfaces between Proteins.	USAB	2007	DBLP DOI BibTeX RDF	Interface Contact Matrix, Macromolecular Interfaces, Tumour Necrosis Factor, Human-Computer Interaction, Bioinformatics
2	Marko Tscherepanow, Franz Kummert	Subcellular Localisation of Proteins in Living Cells Using a Genetic Algorithm and an Incremental Neural Network.	Bildverarbeitung für die Medizin	2007	DBLP DOI BibTeX RDF
2	Eduardo P. Costa, Ana Carolina Lorena, André Carlos Ponce Leon Ferreira de Carvalho, Alex Alves Freitas, Nicholas Holden	Comparing Several Approaches for Hierarchical Classification of Proteins with Decision Trees.	BSB	2007	DBLP DOI BibTeX RDF
2	M. Michael Gromiha	Bioinformatics on beta-Barrel Membrane Proteins: Sequence and Structural Analysis, Discrimination and Prediction.	PRIB	2007	DBLP DOI BibTeX RDF	?-barrel membrane protein, amino acid composition, prediction, genome, discrimination, sequence analysis
2	Shandar Ahmad	Dynamic Outlier Exclusion Training Algorithm for Sequence Based Predictions in Proteins Using Neural Network.	PRIB	2007	DBLP DOI BibTeX RDF	Sequence information, Neural networks, Outliers, Binding sites
2	Michel Nathan	A Multi-site Subcellular Localizer for Fungal Proteins.	Canadian Conference on AI	2007	DBLP DOI BibTeX RDF	fungal protein, decision tree, subcellular localization, multi-site
2	Steinar Thorvaldsen, Elinor Ytterstad, Tor Flå	Inferring Weak Adaptations and Selection Biases in Proteins from Composition and Substitution Matrices.	ISBRA	2007	DBLP DOI BibTeX RDF	Stratified data, Two-way ANOVA, Mantel-Haenszel test, cold adaptation
2	Shinn-Jang Ho, Chia-Yun Chang, Liang-Tsung Huang, Shiow-Fen Hwang, Shinn-Ying Ho	Acquisition of rule-based knowledge for analyzing DNA-binding sites in proteins.	Infoscale	2007	DBLP DOI BibTeX RDF	decision tree, knowledge acquisition, protein, binding site
2	Andrei Paun, Alfonso Rodríguez-Patón	On Flip-Flop Membrane Systems with Proteins.	Workshop on Membrane Computing	2007	DBLP DOI BibTeX RDF
2	Shankara Narayanan Krishna	On the Computational Power of Flip-Flop Proteins on Membranes.	CiE	2007	DBLP DOI BibTeX RDF	Universality, Membrane Computing, Register Machines
2	Mudassir Fayyaz, Asifullah Khan, Adnan Mujahid, Alex Kavokin	Using Multi Level Nearest Neighbor Classifiers for G-Protein Coupled Receptor Sub-families Prediction.	ISBRA	2007	DBLP DOI BibTeX RDF	Multilevel classification, Fast Fourier Transform, Nearest Neighbor Classifier, G-Proteins Coupled Receptors
2	Aristoklis D. Anastasiadis, George D. Magoulas	Analysing the localisation sites of proteins through neural networks ensembles.	Neural Computing and Applications	2006	DBLP DOI BibTeX RDF	Neural ensembles, Protein localisation, Feedforward neural networks, K-nearest neighbour, Imbalanced datasets
2	Timothy Meekhof, Gary W. Daughdrill, Robert B. Heckendorn	String transformation-based Bayesian classification or proteins.	GECCO	2006	DBLP DOI BibTeX RDF	genetic algorithm, bioinformatics, Markov chain, classifier systems, Bayesian classification
2	C. Z. Cai, Q. F. Yuan, H. G. Xiao, X. H. Liu, L. Y. Han, Yu Zong Chen	Prediction of Transmembrane Proteins from Their Primary Sequence by Support Vector Machine Approach.	ICIC	2006	DBLP DOI BibTeX RDF
2	Byungkyu Park, Kyungsook Han	Web Service for Predicting Interacting Proteins and Application to Human and HIV-1 Proteins.	ICIC	2006	DBLP DOI BibTeX RDF
2	Tom Milledge, Gaolin Zheng, Giri Narasimhan	Discovering Sequence-Structure Patterns in Proteins with Variable Secondary Structure.	International Conference on Computational Science	2006	DBLP DOI BibTeX RDF
2	Michael Stout, Jaume Bacardit, Jonathan D. Hirst, Natalio Krasnogor, Jacek Blazewicz	From HP Lattice Models to Real Proteins: Coordination Number Prediction Using Learning Classifier Systems.	EvoWorkshops	2006	DBLP DOI BibTeX RDF
2	Chong Wang, Antje Krause, Chris D. Nugent, Werner Dubitzky	Markov Modeling of Conformational Kinetics of Cardiac Ion Channel Proteins.	ISBMDA	2006	DBLP DOI BibTeX RDF	time constant, Markov model, mutation, conformation, ion channel
2	Kanaka Durga Kedarisetti, Ke Chen 0003, Aashima Kapoor, Lukasz A. Kurgan	Prediction of the Number of Helices for the Twilight Zone Proteins.	CIBCB	2006	DBLP DOI BibTeX RDF
2	Ryosuke Watanabe, Edgar E. Vallejo, Enrique Morett	Inferring functional coupling of proteins using the Evolutionary Bond Energy Algorithm.	CIBCB	2006	DBLP DOI BibTeX RDF
2	Juan Carlos Fernandez, Edgar E. Vallejo, Enrique Morett	Fuzzy C-means for inferring functional coupling of proteins from their phylogenetic profiles.	CIBCB	2006	DBLP DOI BibTeX RDF
2	Jean-Charles Boisson, Laetitia Jourdan, El-Ghazali Talbi, Christian Rolando	A Preliminary Work on Evolutionary Identification of Protein Variants and New Proteins on Grids.	AINA	2006	DBLP DOI BibTeX RDF
2	Andrei Paun, Bianca Popa	P Systems with Proteins on Membranes and Membrane Division.	Developments in Language Theory	2006	DBLP DOI BibTeX RDF
2	Matteo Cavaliere, Sean Sedwards	Modelling Cellular Processes Using Membrane Systems with Peripheral and Integral Proteins.	CMSB	2006	DBLP DOI BibTeX RDF
2	Cao Wei, Kentaro Shimizu	Identification of GPI-(like)-Anchored Proteins by Using SVM.	IMSCCS	2006	DBLP DOI BibTeX RDF
2	Jieping Ye, Ivaylo Ilinkin, Ravi Janardan, Adam Isom	Multiple Structure Alignment and Consensus Identification for Proteins.	WABI	2006	DBLP DOI BibTeX RDF
2	Allam Appa Rao, Bhremeramba, G. R. Sridhar	Mathematical Analysis of Diabetes Related Proteins Having High Sequence Complexity.	ICTAI	2006	DBLP DOI BibTeX RDF	sequence complexity, Comparative genomics, compositional analysis
2	Alireza Shaneh, Gregory Butler	Bayesian Learning for Feed-Forward Neural Network with Application to Proteomic Data: The Glycosylation Sites Detection of the Epidermal Growth Factor-Like Proteins Associated with Cancer as a Case Study.	Canadian Conference on AI	2006	DBLP DOI BibTeX RDF
2	Nadia Busi, Claudio Zandron	Computing with Genetic Gates, Proteins, and Membranes.	Workshop on Membrane Computing	2006	DBLP DOI BibTeX RDF
2	Daniela Besozzi, Grzegorz Rozenberg	Formalizing Spherical Membrane Structures and Membrane Proteins Populations.	Workshop on Membrane Computing	2006	DBLP DOI BibTeX RDF
2	Keith Marsolo, Srinivasan Parthasarathy, Kotagiri Ramamohanarao	Structure-based querying of proteins using wavelets.	CIKM	2006	DBLP DOI BibTeX RDF	protein structure similarity, indexing, wavelets
2	L. Paul Chew	Exact computation of protein structure similarity.	Symposium on Computational Geometry	2006	DBLP DOI BibTeX RDF	protein geometry, structure comparison, dynamic programming, global optimization, convex hull, proteins, protein structure, extreme points
2	Dang Hung Tran, Tho Hoan Pham, Kenji Satou, Tu Bao Ho	Conditional Random Fields for Predicting and Analyzing Histone Occupancy, Acetylation and Methylation Areas in DNA Sequences.	EvoWorkshops	2006	DBLP DOI BibTeX RDF	Histone proteins, acetylation, conditional random fields, methylation
2	Rupali Patwardhan, Haixu Tang, Sun Kim, Mehmet M. Dalkilic	An Approximate de Bruijn Graph Approach to Multiple Local Alignment and Motif Discovery in Protein Sequences.	VDMB	2006	DBLP DOI BibTeX RDF	proteins, Motif discovery, de Bruijn graph, local alignment
2	Senqiang Zhou, Ke Wang	Localization Site Prediction for Membrane Proteins by Integrating Rule and SVM Classification.	IEEE Trans. Knowl. Data Eng.	2005	DBLP DOI BibTeX RDF	clustering, classification and association rules, Bioinformatics (genome or protein) databases
2	Zheng Rong Yang	Orthogonal kernel Machine for the prediction of functional sites in proteins.	IEEE Transactions on Systems, Man, and Cybernetics, Part B	2005	DBLP DOI BibTeX RDF