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Publications of "Amarda Shehu" ( http://dblp.L3S.de/Authors/Amarda_Shehu )

URL (Homepage):  https://cs.gmu.edu/~ashehu/  Author page on DBLP  Author page in RDF  Community of Amarda Shehu in ASPL-2

Publication years (Num. hits)
2007-2011 (17) 2012 (19) 2013-2014 (17) 2015-2016 (21) 2017-2018 (27) 2019 (11)
Publication types (Num. hits)
article(36) incollection(1) inproceedings(72) proceedings(3)
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Found 113 publication records. Showing 112 according to the selection in the facets
Hits ? Authors Title Venue Year Link Author keywords
1Amarda Shehu, Giuseppe Pozzi, Tamer Kahveci Guest Editorial for the ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Ahmed Bin Zaman, Amarda Shehu Balancing multiple objectives in conformation sampling to control decoy diversity in template-free protein structure prediction. Search on Bibsonomy BMC Bioinformatics The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1David Morris, Tatiana Maximova, Erion Plaku, Amarda Shehu Attenuating dependence on structural data in computing protein energy landscapes. Search on Bibsonomy BMC Bioinformatics The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Erion Plaku, Amarda Shehu ROMEO: A Plug-and-play Software Platform of Robotics-inspired Algorithms for Modeling Biomolecular Structures and Motions. Search on Bibsonomy CoRR The full citation details ... 2019 DBLP  BibTeX  RDF
1Tamer Kahveci, Giuseppe Pozzi, Amarda Shehu, May Dongmei Wang Guest Editorial on the Special Issue on Informatics on Biomedical Data Learning, Reasoning, and Representation. Search on Bibsonomy IEEE J. Biomedical and Health Informatics The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Uday Kamath, Carlotta Domeniconi, Amarda Shehu, Kenneth A. De Jong EML: A Scalable, Transparent Meta-Learning Paradigm for Big Data Applications. Search on Bibsonomy Innovations in Big Data Mining and Embedded Knowledge The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Zahra Rajabi, Amarda Shehu, Hemant Purohit User Behavior Modelling for Fake Information Mitigation on Social Web. Search on Bibsonomy SBP-BRiMS The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Ahmed Bin Zaman, Kenneth A. De Jong, Amarda Shehu Using subpopulation EAs to map molecular structure landscapes. Search on Bibsonomy GECCO The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Ahmed Bin Zaman, Parastoo Kamranfar, Carlotta Domeniconi, Amarda Shehu Decoy Ensemble Reduction in Template-free Protein Structure Prediction. Search on Bibsonomy BCB The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Fardina Fathmiul Alam, Taseef Rahman, Amarda Shehu Learning Reduced Latent Representations of Protein Structure Data. Search on Bibsonomy BCB The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Ahmed Bin Zaman, Prasanna Venkatesh Parthasarathy, Amarda Shehu Using Sequence-Predicted Contacts to Guide Template-free Protein Structure Prediction. Search on Bibsonomy BCB The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Julia Handl, Amarda Shehu, José Santos Reyes Advances in the Application and Development of Non-Linear Global Optimization Techniques in Computational Structural Biology. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu From Optimization to Mapping: An Evolutionary Algorithm for Protein Energy Landscapes. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Tatiana Maximova, Erion Plaku, Amarda Shehu Structure-Guided Protein Transition Modeling with a Probabilistic Roadmap Algorithm. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Daniel Veltri, Uday Kamath, Amarda Shehu Deep learning improves antimicrobial peptide recognition. Search on Bibsonomy Bioinformatics The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Nasrin Akhter, Wanli Qiao, Amarda Shehu An Energy Landscape Treatment of Decoy Selection in Template-Free Protein Structure Prediction. Search on Bibsonomy Computation The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Tatiana Maximova, Zijing Zhang, Daniel Carr, Erion Plaku, Amarda Shehu Sample-Based Models of Protein Energy Landscapes and Slow Structural Rearrangements. Search on Bibsonomy Journal of Computational Biology The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Manpriya Dua, Daniel Veltri, Barney Bishop, Amarda Shehu Guiding Exploration of Antimicrobial Peptide Space with a Deep Neural Network. Search on Bibsonomy BIBM The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Nasrin Akhter, Jing Lei, Wanli Qiao, Amarda Shehu Reconstructing and Decomposing Protein Energy Landscapes to Organize Structure Spaces and Reveal Biologically-active States. Search on Bibsonomy BIBM The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Nasrin Akhter, Gopinath Chennupati, Hristo Djidjev, Amarda Shehu Improved Decoy Selection via Machine Learning and Ranking. Search on Bibsonomy ICCABS The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Liban Hassan, Zahra Rajabi, Nasrin Akhter, Amarda Shehu Community Detection for Decoy Selection in Template-free Protein Structure Prediction. Search on Bibsonomy BCB The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Fahad Almsned, Gideon Gogovi, Nicole Bracci, Kylene Kehn-Hall, Estela Blaisten-Barojas, Amarda Shehu Modeling the Tertiary Structure of a Multi-domain Protein: Structure Prediction of Multi-domain Proteins. Search on Bibsonomy BCB The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Amarda Shehu, Cathy H. Wu, Christina Boucher, Jing Li 0002, Hongfang Liu, Mihai Pop (eds.) Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2018, Washington, DC, USA, August 29 - September 01, 2018 Search on Bibsonomy BCB The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Sharmila Roychoudhury, Amarda Shehu Analysis of Molecular Structure Data]{Systematic Study of Different Design Decisions in Markov Model-based Analysis of Molecular Structure Data: Extended Abstract. Search on Bibsonomy BCB The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Nasrin Akhter, Amarda Shehu Modeling Macromolecular Structures and Motions: Computational Methods for Sampling andAnalysis of Energy Landscapes. Search on Bibsonomy BCB The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Illhoi Yoo, Amarda Shehu Guest Editorial for Special Section on BIBM 2014. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Daniel Veltri, Uday Kamath, Amarda Shehu Improving Recognition of Antimicrobial Peptides and Target Selectivity through Machine Learning and Genetic Programming. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu An evolutionary algorithm to model structural excursions of a protein. Search on Bibsonomy GECCO (Companion) The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu Evolutionary search for paths on protein energy landscapes. Search on Bibsonomy GECCO (Companion) The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Wanli Qiao, Tatiana Maximova, Xiaowen Fang, Erion Plaku, Amarda Shehu Reconstructing and mining protein energy landscape to understand disease. Search on Bibsonomy BIBM The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1David Morris, Tatiana Maximova, Erion Plaku, Amarda Shehu Out of one, many: Exploiting intrinsic motions to explore protein structure spaces. Search on Bibsonomy ICCABS The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu Modeling protein structural transitions as a multiobjective optimization problem. Search on Bibsonomy CIBCB The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Wanli Qiao, Tatiana Maximova, Erion Plaku, Amarda Shehu Statistical Analysis of Computed Energy Landscapes to Understand Dysfunction in Pathogenic Protein Variants. Search on Bibsonomy BCB The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Nurit Haspel, Lenore J. Cowen, Amarda Shehu, Tamer Kahveci, Giuseppe Pozzi (eds.) Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2017, Boston, MA, USA, August 20-23, 2017 Search on Bibsonomy BCB The full citation details ... 2017 DBLP  BibTeX  RDF
1Nurit Haspel, Amarda Shehu, Kevin Molloy The 2017 Computational Structural Bioinformatics Workshop: CSBW 2017. Search on Bibsonomy BCB The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu Evolving Conformation Paths to Model Protein Structural Transitions. Search on Bibsonomy BCB The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, David Morris, Amarda Shehu ACM-BCB '17 Tutorial: Robotics-inspired Algorithms for Modeling Protein Structures and Motions. Search on Bibsonomy BCB The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Amarda Shehu, Tamer Kahveci, Giuseppe Pozzi Highlights Talks at ACM BCB 2017. Search on Bibsonomy BCB The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Amarda Shehu, Erion Plaku A Survey of Computational Treatments of Biomolecules by Robotics-Inspired Methods Modeling Equilibrium Structure and Dynamic. Search on Bibsonomy J. Artif. Intell. Res. The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Rudy Clausen, Amarda Shehu A stochastic roadmap method to model protein structural transitions. Search on Bibsonomy Robotica The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Lydia Tapia, Juan Cortés, Amarda Shehu, Jinalin Chen Foreword on special issue on robotics methods for structural and dynamic modeling of molecular systems. Search on Bibsonomy Robotica The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Tatiana Maximova, Ryan Moffatt, Buyong Ma, Ruth Nussinov, Amarda Shehu Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics. Search on Bibsonomy PLoS Computational Biology The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Carola Doerr, Julia Handl, Emma Hart, Gabriela Ochoa, Amarda Shehu, Tea Tusar, Anya E. Vostinar, Christine Zarges, A. Nur Zincir-Heywood Women@GECCO 2016 Chairs' Welcome. Search on Bibsonomy GECCO (Companion) The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu Path-based Guidance of an Evolutionary Algorithm in Mapping a Fitness Landscape and its Connectivity. Search on Bibsonomy GECCO (Companion) The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1José Santos, Julia Handl, Amarda Shehu Workshop Evolutionary Computation in Computational Structural Biology 2016 Chairs' Welcome. Search on Bibsonomy GECCO (Companion) The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu A Novel EA-based Memetic Approach for Efficiently Mapping Complex Fitness Landscapes. Search on Bibsonomy GECCO The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Tatiana Maximova, Daniel Carr, Erion Plaku, Amarda Shehu Sample-based Models of Protein Structural Transitions. Search on Bibsonomy BCB The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Amarda Shehu, Ruth Nussinov Computational Methods for Exploration and Analysis of Macromolecular Structure and Dynamics. Search on Bibsonomy PLoS Computational Biology The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Rudy Clausen, Buyong Ma, Ruth Nussinov, Amarda Shehu Mapping the Conformation Space of Wildtype and Mutant H-Ras with a Memetic, Cellular, and Multiscale Evolutionary Algorithm. Search on Bibsonomy PLoS Computational Biology The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Jing He 0002, Amarda Shehu, Nurit Haspel, Brian Chen The 7th Computational Structural Bioinformatics Workshop. Search on Bibsonomy Journal of Computational Biology The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Rudy Clausen, Amarda Shehu A Data-Driven Evolutionary Algorithm for Mapping Multibasin Protein Energy Landscapes. Search on Bibsonomy Journal of Computational Biology The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Irina Hashmi, Amarda Shehu idDock+: Integrating Machine Learning in Probabilistic Search for Protein-Protein Docking. Search on Bibsonomy Journal of Computational Biology The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Rudy Clausen, Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu Evolution Strategies for Exploring Protein Energy Landscapes. Search on Bibsonomy GECCO The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu Mapping Multiple Minima in Protein Energy Landscapes with Evolutionary Algorithms. Search on Bibsonomy GECCO (Companion) The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Amarda Shehu, Kenneth A. De Jong Evolutionary Algorithms for Protein Structure Modeling. Search on Bibsonomy GECCO (Companion) The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Amarda Shehu Interleaving Global and Local Search for Protein Motion Computation. Search on Bibsonomy ISBRA The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Emmanuel Sapin, Kenneth A. De Jong, Amarda Shehu Evolutionary search strategies for efficient sample-based representations of multiple-basin protein energy landscapes. Search on Bibsonomy BIBM The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Tatiana Maximova, Erion Plaku, Amarda Shehu Computing transition paths in multiple-basin proteins with a probabilistic roadmap algorithm guided by structure data. Search on Bibsonomy BIBM The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Jun Huan, Satoru Miyano, Amarda Shehu, Xiaohua Tony Hu, Bin Ma, Sanguthevar Rajasekaran, Vijay K. Gombar, Matthieu-P. Schapranow, Illhoi Yoo, Jiayu Zhou, Brian Chen, Vinay Pai, Brian G. Pierce (eds.) 2015 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2015, Washington, DC, USA, November 9-12, 2015 Search on Bibsonomy BIBM The full citation details ... 2015 DBLP  BibTeX  RDF
1Kevin Molloy, M. Jennifer Van, Daniel Barbará, Amarda Shehu Exploring representations of protein structure for automated remote homology detection and mapping of protein structure space. Search on Bibsonomy BMC Bioinformatics The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Amarda Shehu, Kenneth A. De Jong Evolutionary search algorithms for protein modeling: from de novo structure prediction to comprehensive maps of functionally-relevant structures of protein chains and assemblies. Search on Bibsonomy GECCO (Companion) The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Daniel Veltri, Uday Kamath, Amarda Shehu A novel method to improve recognition of antimicrobial peptides through distal sequence-based features. Search on Bibsonomy BIBM The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Didier Devaurs, Amarda Shehu, Thierry Siméon, Juan Cortés Sampling-based methods for a full characterization of energy landscapes of small peptides. Search on Bibsonomy BIBM The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Rudy Clausen, Amarda Shehu A multiscale hybrid evolutionary algorithm to obtain sample-based representations of multi-basin protein energy landscapes. Search on Bibsonomy BCB The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Irina Hashmi, Daniel Veltri, Nadine Kabbani, Amarda Shehu Knowledge-based search and multi-objective filters: proposed structural models of GPCR dimerization. Search on Bibsonomy BCB The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Sameh Saleh, Amarda Shehu Probabilistic Search and Energy Guidance for Biased Decoy Sampling in Ab Initio Protein Structure Prediction. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Vikas Agrawal, Christopher Archibald, Mehul Bhatt, Hung Hai Bui, Diane J. Cook, Juan Cortés, Christopher W. Geib, Vibhav Gogate, Hans W. Guesgen, Dietmar Jannach, Michael Johanson, Kristian Kersting, George Konidaris, Lars Kotthoff, Martin Michalowski, Sriraam Natarajan, Barry O'Sullivan, Marc Pickett, Vedran Podobnik, David Poole 0001, Lokendra Shastri, Amarda Shehu, Gita Sukthankar The AAAI-13 Conference Workshops. Search on Bibsonomy AI Magazine The full citation details ... 2013 DBLP  BibTeX  RDF
1Brian S. Olson, Kenneth A. De Jong, Amarda Shehu Off-lattice protein structure prediction with homologous crossover. Search on Bibsonomy GECCO The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Elena G. Randou, Daniel Veltri, Amarda Shehu Systematic analysis of global features and model building for recognition of antimicrobial peptides. Search on Bibsonomy ICCABS The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, M. Jennifer Van, Daniel Barbará, Amarda Shehu Higher-order representations of protein structure space. Search on Bibsonomy ICCABS The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Rudy Clausen, Amarda Shehu A PCA-guided Search Algorithm to Probe the Conformational Space of the Ras Protein. Search on Bibsonomy BCB The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Elena G. Randou, Daniel Veltri, Amarda Shehu Binary Response Models for Recognition of Antimicrobial Peptides. Search on Bibsonomy BCB The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Rudy Clausen, Amarda Shehu Exploring the Structure Space of Wildtype Ras Guided by Experimental Data. Search on Bibsonomy BCB The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Irina Hashmi, Amarda Shehu Informatics-driven Protein-protein Docking. Search on Bibsonomy BCB The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Brian S. Olson, Amarda Shehu Multi-Objective Stochastic Search for Sampling Local Minima in the Protein Energy Surface. Search on Bibsonomy BCB The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Irina Hashmi, Amarda Shehu Protein-protein Docking Using Information from Native Interaction Interfaces. Search on Bibsonomy BCB The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Brian S. Olson, Irina Hashmi, Kevin Molloy, Amarda Shehu Basin Hopping as a General and Versatile Optimization Framework for the Characterization of Biological Macromolecules. Search on Bibsonomy Adv. Artificial Intellegence The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Uday Kamath, Jack Compton, Rezarta Islamaj Dogan, Kenneth A. De Jong, Amarda Shehu An Evolutionary Algorithm Approach for Feature Generation from Sequence Data and Its Application to DNA Splice Site Prediction. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Irina Hashmi, Bahar Akbal-Delibas, Nurit Haspel, Amarda Shehu Guiding protein docking with Geometric and Evolutionary Information. Search on Bibsonomy J. Bioinformatics and Computational Biology The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Brian S. Olson, Kevin Molloy, S. Farid Hendi, Amarda Shehu Guiding Probabilistic Search of the protein conformational Space with Structural Profiles. Search on Bibsonomy J. Bioinformatics and Computational Biology The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Bahar Akbal-Delibas, Irina Hashmi, Amarda Shehu, Nurit Haspel An Evolutionary conservation-Based Method for Refining and Reranking protein Complex Structures. Search on Bibsonomy J. Bioinformatics and Computational Biology The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Amarda Shehu, Lydia E. Kavraki Modeling Structures and Motions of Loops in Protein Molecules. Search on Bibsonomy Entropy The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Uday Kamath, Johan Kaers, Amarda Shehu, Kenneth A. De Jong A Spatial EA Framework for Parallelizing Machine Learning Methods. Search on Bibsonomy PPSN (1) The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Amarda Shehu A robotics-inspired method to sample conformational paths connecting known functionally-relevant structures in protein systems. Search on Bibsonomy BIBM Workshops The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Daniel Veltri, Amarda Shehu Physico-chemical features for recognition of antimicrobial peptides. Search on Bibsonomy BIBM Workshops The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Sameh Saleh, Brian S. Olson, Amarda Shehu An evolutionary framework to sample near-native protein conformations. Search on Bibsonomy BIBM Workshops The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Sameh Saleh, Brian S. Olson, Amarda Shehu A population-based evolutionary algorithm for sampling minima in the protein energy surface. Search on Bibsonomy BIBM Workshops The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Amarda Shehu Mapping conformational pathways between known functional protein states. Search on Bibsonomy BIBM Workshops The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Irina Hashmi, Amarda Shehu A basin hopping algorithm for protein-protein docking. Search on Bibsonomy BIBM The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Brian S. Olson, Amarda Shehu Jumping low, jumping high: Controlling hopping in the protein energy surface. Search on Bibsonomy BIBM Workshops The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Brian S. Olson, Amarda Shehu Efficient basin hopping in the protein energy surface. Search on Bibsonomy BIBM The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Irina Hashmi, Amarda Shehu Sampling low-energy protein-protein configurations with basin hopping. Search on Bibsonomy BIBM Workshops The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Amarda Shehu A tree-based search to bias sampling of protein decoy conformations. Search on Bibsonomy BIBM Workshops The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Kevin Molloy, Amarda Shehu Biased decoy sampling to aid the selection of near-native protein conformations. Search on Bibsonomy BCB The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Brian S. Olson, Amarda Shehu An evolutionary search framework to efficiently sample local minima in the protein conformational space. Search on Bibsonomy BCB The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Nurit Haspel, Amarda Shehu The 5th International Conference on Bio-Inspired Models of Network, Information and Computing Systems (Bionetics 2010) Special Track on Bioinformatics. Search on Bibsonomy J. Bioinformatics and Computational Biology The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Uday Kamath, Amarda Shehu, Kenneth A. De Jong A Two-Stage Evolutionary Approach for Effective Classification of hypersensitive DNA Sequences. Search on Bibsonomy J. Bioinformatics and Computational Biology The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Brian S. Olson, Kevin Molloy, Amarda Shehu In Search of the protein Native State with a Probabilistic Sampling Approach. Search on Bibsonomy J. Bioinformatics and Computational Biology The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Uday Kamath, Kenneth A. De Jong, Amarda Shehu An evolutionary-based approach for feature generation: Eukaryotic promoter recognition. Search on Bibsonomy IEEE Congress on Evolutionary Computation The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Bahar Akbal-Delibas, Irina Hashmi, Amarda Shehu, Nurit Haspel Refinement of docked protein complex structures using evolutionary traces. Search on Bibsonomy BIBM Workshops The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
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