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Publications of "Marie-France Sagot" ( http://dblp.L3S.de/Authors/Marie-France_Sagot )

URL (Homepage):  https://en.wikipedia.org/wiki/Marie-France_Sagot  Author page on DBLP  Author page in RDF  Community of Marie-France Sagot in ASPL-2

Publication years (Num. hits)
1995-2002 (15) 2003-2005 (18) 2006-2008 (25) 2009-2010 (19) 2011-2012 (17) 2013-2015 (17) 2016-2019 (14)
Publication types (Num. hits)
article(75) inproceedings(47) proceedings(3)
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The graphs summarize 53 occurrences of 34 keywords

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Found 126 publication records. Showing 125 according to the selection in the facets
Hits ? Authors Title Venue Year Link Author keywords
1Laura Urbini, Blerina Sinaimeri, Catherine Matias, Marie-France Sagot Exploring the Robustness of the Parsimonious Reconciliation Method in Host-Symbiont Cophylogeny. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2019 DBLP  DOI  BibTeX  RDF
1Katharina T. Huber, Vincent Moulton, Marie-France Sagot, Blerina Sinaimeri Geometric medians in reconciliation spaces of phylogenetic trees. Search on Bibsonomy Inf. Process. Lett. The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Henning Fernau, Petr A. Golovach, Marie-France Sagot Algorithmic Enumeration: Output-sensitive, Input-Sensitive, Parameterized, Approximativ (Dagstuhl Seminar 18421). Search on Bibsonomy Dagstuhl Reports The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Katerina Böhmová, Luca Häfliger, Matús Mihalák, Tobias Pröger, Gustavo Sacomoto, Marie-France Sagot Computing and Listing st-Paths in Public Transportation Networks. Search on Bibsonomy Theory Comput. Syst. The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
1Leandro Lima, Blerina Sinaimeri, Gustavo Sacomoto, Hélène Lopez-Maestre, Camille Marchet, Vincent Miele, Marie-France Sagot, Vincent Lacroix Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads. Search on Bibsonomy Algorithms for Molecular Biology The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Mattia Gastaldello, Tiziana Calamoneri, Marie-France Sagot Extracting Few Representative Reconciliations with Host Switches. Search on Bibsonomy CIBB The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Vicente Acuña, Roberto Grossi, Giuseppe F. Italiano, Leandro Lima, Romeo Rizzi, Gustavo Sacomoto, Marie-France Sagot, Blerina Sinaimeri On Bubble Generators in Directed Graphs. Search on Bibsonomy WG The full citation details ... 2017 DBLP  DOI  BibTeX  RDF
1Ricardo Andrade, Martin Wannagat, Cecilia Coimbra Klein, Vicente Acuña, Alberto Marchetti-Spaccamela, Paulo Vieira Milreu, Leen Stougie, Marie-France Sagot Enumeration of minimal stoichiometric precursor sets in metabolic networks. Search on Bibsonomy Algorithms for Molecular Biology The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Roeland Merks, Marie-France Sagot Tackling Big Data in the Life Sciences - Introduction to the Special Theme. Search on Bibsonomy ERCIM News The full citation details ... 2016 DBLP  BibTeX  RDF
1André Veríssimo, Arlindo Limede Oliveira, Marie-France Sagot, Susana Vinga DegreeCox - a network-based regularization method for survival analysis. Search on Bibsonomy BMC Bioinformatics The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Laura Urbini, Blerina Sinaimeri, Catherine Matias, Marie-France Sagot Robustness of the Parsimonious Reconciliation Method in Cophylogeny. Search on Bibsonomy AlCoB The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Tiziana Calamoneri, Mattia Gastaldello, Arnaud Mary, Marie-France Sagot, Blerina Sinaimeri On Maximal Chain Subgraphs and Covers of Bipartite Graphs. Search on Bibsonomy ICTCS The full citation details ... 2016 DBLP  BibTeX  RDF
1Katerina Böhmová, Matús Mihalák, Tobias Pröger, Gustavo Sacomoto, Marie-France Sagot Computing and Listing st-Paths in Public Transportation Networks. Search on Bibsonomy CSR The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Tiziana Calamoneri, Mattia Gastaldello, Arnaud Mary, Marie-France Sagot, Blerina Sinaimeri On Maximal Chain Subgraphs and Covers of Bipartite Graphs. Search on Bibsonomy IWOCA The full citation details ... 2016 DBLP  DOI  BibTeX  RDF
1Gustavo Sacomoto, Vincent Lacroix, Marie-France Sagot A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs. Search on Bibsonomy Algorithms for Molecular Biology The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Beatrice Donati, Christian Baudet, Blerina Sinaimeri, Pierluigi Crescenzi, Marie-France Sagot EUCALYPT: efficient tree reconciliation enumerator. Search on Bibsonomy Algorithms for Molecular Biology The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Susan Higashi, Cyril Fournier, Christian Gautier, Christine Gaspin, Marie-France Sagot Mirinho: An efficient and general plant and animal pre-miRNA predictor for genomic and deep sequencing data. Search on Bibsonomy BMC Bioinformatics The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Emanuele Bosi, Beatrice Donati, Marco Galardini, Sara Brunetti, Marie-France Sagot, Pietro Liò, Pierluigi Crescenzi, Renato Fani, Marco Fondi MeDuSa: a multi-draft based scaffolder. Search on Bibsonomy Bioinformatics The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Ricardo Andrade, Etienne Birmelé, Arnaud Mary, Thomas Picchetti, Marie-France Sagot Incremental complexity of a bi-objective hypergraph transversal problem. Search on Bibsonomy CoRR The full citation details ... 2015 DBLP  BibTeX  RDF
1Ricardo Andrade, Etienne Birmelé, Arnaud Mary, Thomas Picchetti, Marie-France Sagot Incremental Complexity of a Bi-objective Hypergraph Transversal Problem. Search on Bibsonomy FCT The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
1Paulo Vieira Milreu, Cecilia Coimbra Klein, Ludovic Cottret, Vicente Acuña, Etienne Birmelé, Michele Borassi, Christophe Junot, Alberto Marchetti-Spaccamela, Andrea Marino, Leen Stougie, Fabien Jourdan, Pierluigi Crescenzi, Vincent Lacroix, Marie-France Sagot Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure. Search on Bibsonomy Bioinformatics The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Gustavo Sacomoto, Blerina Sinaimeri, Camille Marchet, Vincent Miele, Marie-France Sagot, Vincent Lacroix Navigating in a sea of repeats in RNA-seq without drowning. Search on Bibsonomy CoRR The full citation details ... 2014 DBLP  BibTeX  RDF
1Romeo Rizzi, Gustavo Sacomoto, Marie-France Sagot Efficiently listing bounded length st-paths. Search on Bibsonomy CoRR The full citation details ... 2014 DBLP  BibTeX  RDF
1Rui A. Ferreira, Roberto Grossi, Romeo Rizzi, Gustavo Sacomoto, Marie-France Sagot Amortized Õ(|V|)-Delay Algorithm for Listing Chordless Cycles in Undirected Graphs. Search on Bibsonomy CoRR The full citation details ... 2014 DBLP  BibTeX  RDF
1Maria Federico, Pierre Peterlongo, Nadia Pisanti, Marie-France Sagot Rime: Repeat identification. Search on Bibsonomy Discrete Applied Mathematics The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Rui A. Ferreira, Roberto Grossi, Romeo Rizzi, Gustavo Sacomoto, Marie-France Sagot Amortized Õ(|V|) -Delay Algorithm for Listing Chordless Cycles in Undirected Graphs. Search on Bibsonomy ESA The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Romeo Rizzi, Gustavo Sacomoto, Marie-France Sagot Efficiently Listing Bounded Length st-Paths. Search on Bibsonomy IWOCA The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Gustavo Sacomoto, Blerina Sinaimeri, Camille Marchet, Vincent Miele, Marie-France Sagot, Vincent Lacroix Navigating in a Sea of Repeats in RNA-seq without Drowning. Search on Bibsonomy WABI The full citation details ... 2014 DBLP  DOI  BibTeX  RDF
1Gustavo Sacomoto, Vincent Lacroix, Marie-France Sagot A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs and its application to the detection of alternative splicing in RNA-seq data. Search on Bibsonomy CoRR The full citation details ... 2013 DBLP  BibTeX  RDF
1Michele Borassi, Pierluigi Crescenzi, Vincent Lacroix, Andrea Marino, Marie-France Sagot, Paulo Vieira Milreu Telling Stories Fast. Search on Bibsonomy SEA The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Gustavo Sacomoto, Vincent Lacroix, Marie-France Sagot A Polynomial Delay Algorithm for the Enumeration of Bubbles with Length Constraints in Directed Graphs and Its Application to the Detection of Alternative Splicing in RNA-seq Data. Search on Bibsonomy WABI The full citation details ... 2013 DBLP  DOI  BibTeX  RDF
1Christian Baudet, Zanoni Dias, Marie-France Sagot Sampling solution traces for the problem of sorting permutations by signed reversals. Search on Bibsonomy Algorithms for Molecular Biology The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot EIC Editorial. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Gustavo Akio Tominaga Sacomoto, Janice Kielbassa, Rayan Chikhi, Raluca Uricaru, Pavlos Antoniou, Marie-France Sagot, Pierre Peterlongo, Vincent Lacroix KISSPLICE: de-novo calling alternative splicing events from RNA-seq data. Search on Bibsonomy BMC Bioinformatics The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Vicente Acuña, Etienne Birmelé, Ludovic Cottret, Pierluigi Crescenzi, Fabien Jourdan, Vincent Lacroix, Alberto Marchetti-Spaccamela, Andrea Marino, Paulo Vieira Milreu, Marie-France Sagot, Leen Stougie Telling stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets. Search on Bibsonomy Theor. Comput. Sci. The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Nuno D. Mendes, Steffen Heyne, Ana T. Freitas, Marie-France Sagot, Rolf Backofen Navigating the unexplored seascape of pre-miRNA candidates in single-genome approaches. Search on Bibsonomy Bioinformatics The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Vicente Acuña, Paulo Vieira Milreu, Ludovic Cottret, Alberto Marchetti-Spaccamela, Leen Stougie, Marie-France Sagot Algorithms and complexity of enumerating minimal precursor sets in genome-wide metabolic networks. Search on Bibsonomy Bioinformatics The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Julien Allali, Cédric Saule, Cédric Chauve, Yves D'Aubenton-Carafa, Alain Denise, Christine Drevet, Pascal Ferraro, Daniel Gautheret, Claire Herrbach, Fabrice Leclerc, Antoine de Monte, Aïda Ouangraoua, Marie-France Sagot, Michel Termier, Claude Thermes, Hélène Touzet BRASERO: A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms. Search on Bibsonomy Adv. Bioinformatics The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Etienne Birmelé, Rui A. Ferreira, Roberto Grossi, Andrea Marino, Nadia Pisanti, Romeo Rizzi, Gustavo Akio Tominaga Sacomoto, Marie-France Sagot Optimal Listing of Cycles and st-Paths in Undirected Graphs Search on Bibsonomy CoRR The full citation details ... 2012 DBLP  BibTeX  RDF
1Igor Nor, Danny Hermelin, Sylvain Charlat, Jan Engelstadter, Max Reuter, Olivier Duron, Marie-France Sagot Mod/Resc Parsimony Inference: Theory and application. Search on Bibsonomy Inf. Comput. The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Alexandre S. Freire, Vicente Acuña, Pilu Crescenzi, Carlos Eduardo Ferreira, Vincent Lacroix, Paulo Vieira Milreu, Eduardo Moreno, Marie-France Sagot Minimum Ratio Cover of Matrix Columns by Extreme Rays of Its Induced Cone. Search on Bibsonomy ISCO The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Etienne Birmelé, Pierluigi Crescenzi, Rui A. Ferreira, Roberto Grossi, Vincent Lacroix, Andrea Marino, Nadia Pisanti, Gustavo Akio Tominaga Sacomoto, Marie-France Sagot Efficient Bubble Enumeration in Directed Graphs. Search on Bibsonomy SPIRE The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot EIC Editorial. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot EIC Editorial. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Yves-Pol Deniélou, Marie-France Sagot, Frédéric Boyer, Alain Viari Bacterial syntenies: an exact approach with gene quorum. Search on Bibsonomy BMC Bioinformatics The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Augusto F. Vellozo, Amélie S. Véron, Patrice Baa-Puyoulet, Jaime Huerta-Cepas, Ludovic Cottret, Gérard Febvay, Federica Calevro, Yvan Rahbé, Angela E. Douglas, Toni Gabaldón, Marie-France Sagot, Hubert Charles, Stefano Colella CycADS: an annotation database system to ease the development and update of BioCyc databases. Search on Bibsonomy Database The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Maria Federico, Pierre Peterlongo, Nadia Pisanti, Marie-France Sagot Finding Long and Multiple Repeats with Edit Distance. Search on Bibsonomy Stringology The full citation details ... 2011 DBLP  BibTeX  RDF
1Teresa M. Przytycka, Marie-France Sagot (eds.) Algorithms in Bioinformatics - 11th International Workshop, WABI 2011, Saarbrücken, Germany, September 5-7, 2011. Proceedings Search on Bibsonomy WABI The full citation details ... 2011 DBLP  DOI  BibTeX  RDF
1Vicente Acuña, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie A note on the complexity of finding and enumerating elementary modes. Search on Bibsonomy Biosystems The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot EIC Editorial. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Ludovic Cottret, David Wildridge, Florence Vinson, Michael P. Barrett, Hubert Charles, Marie-France Sagot, Fabien Jourdan MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks. Search on Bibsonomy Nucleic Acids Research The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Christian Baudet, Claire Lemaitre, Zanoni Dias, Christian Gautier, Eric Tannier, Marie-France Sagot Cassis: detection of genomic rearrangement breakpoints. Search on Bibsonomy Bioinformatics The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Igor Nor, Danny Hermelin, Sylvain Charlat, Jan Engelstadter, Max Reuter, Olivier Duron, Marie-France Sagot Mod/Resc Parsimony Inference Search on Bibsonomy CoRR The full citation details ... 2010 DBLP  BibTeX  RDF
1Said Sadique Adi, Marília D. V. Braga, Cristina G. Fernandes, Carlos Eduardo Ferreira, Fábio Viduani Martinez, Marie-France Sagot, Marco A. Stefanes, Christian Tjandraatmadja, Yoshiko Wakabayashi Repetition-free longest common subsequence. Search on Bibsonomy Discrete Applied Mathematics The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Ludovic Cottret, Paulo Vieira Milreu, Vicente Acuña, Alberto Marchetti-Spaccamela, Leen Stougie, Hubert Charles, Marie-France Sagot Graph-Based Analysis of the Metabolic Exchanges between Two Co-Resident Intracellular Symbionts, Baumannia cicadellinicola and Sulcia muelleri, with Their Insect Host, Homalodisca coagulata. Search on Bibsonomy PLoS Computational Biology The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Igor Nor, Danny Hermelin, Sylvain Charlat, Jan Engelstadter, Max Reuter, Olivier Duron, Marie-France Sagot Mod/Resc Parsimony Inference. Search on Bibsonomy CPM The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Pierre Peterlongo, Nicolas Schnel, Nadia Pisanti, Marie-France Sagot, Vincent Lacroix Identifying SNPs without a Reference Genome by Comparing Raw Reads. Search on Bibsonomy SPIRE The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Paulo Vieira Milreu, Vicente Acuña, Etienne Birmelé, Pierluigi Crescenzi, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie, Vincent Lacroix Enumerating Chemical Organisations in Consistent Metabolic Networks: Complexity and Algorithms. Search on Bibsonomy WABI The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
1Marília D. V. Braga, Christian Gautier, Marie-France Sagot An asymmetric approach to preserve common intervals while sorting by reversals. Search on Bibsonomy Algorithms for Molecular Biology The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
1Pierre Peterlongo, Gustavo Akio Tominaga Sacomoto, Alair Pereira do Lago, Nadia Pisanti, Marie-France Sagot Lossless filter for multiple repeats with bounded edit distance. Search on Bibsonomy Algorithms for Molecular Biology The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
1Vicente Acuña, Flavio Chierichetti, Vincent Lacroix, Alberto Marchetti-Spaccamela, Marie-France Sagot, Leen Stougie Modes and cuts in metabolic networks: Complexity and algorithms. Search on Bibsonomy Biosystems The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot New EIC Editorial. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot EIC Editorial. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot EIC Editorial: Introducing New Associate Editors. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot, B. J. Morrison McKay, Gene Myers ISMB/ECCB 2009 Stockholm. Search on Bibsonomy Bioinformatics The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
1Sophie Schbath, Vincent Lacroix, Marie-France Sagot Assessing the Exceptionality of Coloured Motifs in Networks. Search on Bibsonomy EURASIP J. Bioinformatics and Systems Biology The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
1Yves-Pol Deniélou, Frédéric Boyer, Alain Viari, Marie-France Sagot Multiple Alignment of Biological Networks: A Flexible Approach. Search on Bibsonomy CPM The full citation details ... 2009 DBLP  DOI  BibTeX  RDF multiple graph alignment, biological network comparison, protein-protein interactions
1Said Sadique Adi, Marília D. V. Braga, Cristina G. Fernandes, Carlos Eduardo Ferreira, Fábio Viduani Martinez, Marie-France Sagot, Marco A. Stefanes, Christian Tjandraatmadja, Yoshiko Wakabayashi Repetition-free longest common subsequence. Search on Bibsonomy Electronic Notes in Discrete Mathematics The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Vincent Lacroix, Ludovic Cottret, Patricia Thébault, Marie-France Sagot An Introduction to Metabolic Networks and Their Structural Analysis. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2008 DBLP  DOI  BibTeX  RDF Introductory and Survey, modelling, Graph Theory, modularity, evolution, reconstruction, Biology and genetics, metabolic networks
1Marília D. V. Braga, Marie-France Sagot, Céline Scornavacca, Eric Tannier Exploring the Solution Space of Sorting by Reversals, with Experiments and an Application to Evolution. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2008 DBLP  DOI  BibTeX  RDF perfect sorting, sex chromosomes, evolution, genome rearrangements, sorting by reversals, common intervals, signed permutations
1Claire Lemaitre, Eric Tannier, Christian Gautier, Marie-France Sagot Precise detection of rearrangement breakpoints in mammalian chromosomes. Search on Bibsonomy BMC Bioinformatics The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Claire Lemaitre, Marie-France Sagot A small trip in the untranquil world of genomes: A survey on the detection and analysis of genome rearrangement breakpoints. Search on Bibsonomy Theor. Comput. Sci. The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Pierre Peterlongo, Nadia Pisanti, Frédéric Boyer, Alair Pereira do Lago, Marie-France Sagot Lossless filter for multiple repetitions with Hamming distance. Search on Bibsonomy J. Discrete Algorithms The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Katia S. Guimarães, Marie-France Sagot Editorial. Search on Bibsonomy J. Discrete Algorithms The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Julien Allali, Marie-France Sagot A new distance for high level RNA secondary structure comparison Search on Bibsonomy CoRR The full citation details ... 2008 DBLP  BibTeX  RDF
1Pierre Peterlongo, Julien Allali, Marie-France Sagot Indexing Gapped-Factors Using a Tree. Search on Bibsonomy Int. J. Found. Comput. Sci. The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Julien Allali, Marie-France Sagot A multiple layer model to compare RNA secondary structures. Search on Bibsonomy Softw., Pract. Exper. The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Ludovic Cottret, Paulo Vieira Milreu, Vicente Acuña, Alberto Marchetti-Spaccamela, Fábio Viduani Martinez, Marie-France Sagot, Leen Stougie Enumerating Precursor Sets of Target Metabolites in a Metabolic Network. Search on Bibsonomy WABI The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Paulo G. S. da Fonseca, Katia S. Guimarães, Marie-France Sagot Efficient representation and P-value computation for high-order Markov motifs. Search on Bibsonomy ECCB The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
1Emilios Cambouropoulos, Maxime Crochemore, Costas S. Iliopoulos, Manal Mohamed, Marie-France Sagot All maximal-pairs in step-leap representation of melodic sequence. Search on Bibsonomy Inf. Sci. The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
1Yoan Diekmann, Marie-France Sagot, Eric Tannier Evolution under Reversals: Parsimony and Conservation of Common Intervals. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2007 DBLP  DOI  BibTeX  RDF perfect sorting, Computational biology, genome rearrangements, sorting by reversals, common intervals, signed permutations
1Estela Maris Rodrigues, Marie-France Sagot, Yoshiko Wakabayashi The maximum agreement forest problem: Approximation algorithms and computational experiments. Search on Bibsonomy Theor. Comput. Sci. The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
1Eric Tannier, Anne Bergeron, Marie-France Sagot Advances on sorting by reversals. Search on Bibsonomy Discrete Applied Mathematics The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
1Romain Bourqui, Ludovic Cottret, Vincent Lacroix, David Auber, Patrick Mary, Marie-France Sagot, Fabien Jourdan Metabolic network visualization eliminating node redundance and preserving metabolic pathways. Search on Bibsonomy BMC Systems Biology The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
1Marília D. V. Braga, Marie-France Sagot, Céline Scornavacca, Eric Tannier The Solution Space of Sorting by Reversals. Search on Bibsonomy ISBRA The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
1Alexandra M. Carvalho, Arlindo L. Oliveira, Marie-France Sagot Efficient Learning of Bayesian Network Classifiers. Search on Bibsonomy Australian Conference on Artificial Intelligence The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
1Marie-France Sagot, Maria Emilia Telles Walter (eds.) Advances in Bioinformatics and Computational Biology, Second Brazilian Symposium on Bioinformatics, BSB 2007, Angra dos Reis, Brazil, August 29-31, 2007, Proceedings Search on Bibsonomy BSB The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
1Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot An Efficient Algorithm for the Identification of Structured Motifs in DNA Promoter Sequences. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2006 DBLP  DOI  BibTeX  RDF Box-link, factor tree, binding site consensus, promoter, structured motif
1Vincent Lacroix, Cristina G. Fernandes, Marie-France Sagot Motif Search in Graphs: Application to Metabolic Networks. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2006 DBLP  DOI  BibTeX  RDF Reaction motif, leucine biosynthesis, evolution, graph algorithms, combinatorics, subgraph isomorphism, metabolic network, network motif
1Maxime Crochemore, Costas S. Iliopoulos, Manal Mohamed, Marie-France Sagot Longest repeats with a block of k don't cares. Search on Bibsonomy Theor. Comput. Sci. The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
1Pierre Peterlongo, Julien Allali, Marie-France Sagot The gapped-factor tree. Search on Bibsonomy Stringology The full citation details ... 2006 DBLP  BibTeX  RDF
1Nadia Pisanti, Alexandra M. Carvalho, Laurent Marsan, Marie-France Sagot RISOTTO: Fast Extraction of Motifs with Mismatches. Search on Bibsonomy LATIN The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
1Nadia Pisanti, Maxime Crochemore, Roberto Grossi, Marie-France Sagot Bases of Motifs for Generating Repeated Patterns with Wild Cards. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2005 DBLP  DOI  BibTeX  RDF Motifs basis, repeated motifs
1Julien Allali, Marie-France Sagot A New Distance for High Level RNA Secondary Structure Comparison. Search on Bibsonomy IEEE/ACM Trans. Comput. Biology Bioinform. The full citation details ... 2005 DBLP  DOI  BibTeX  RDF edit operation, distance, secondary structure, RNA, Tree comparison
1Costas S. Iliopoulos, James A. M. McHugh, Pierre Peterlongo, Nadia Pisanti, Wojciech Rytter, Marie-France Sagot A first approach to finding common motifs with gaps. Search on Bibsonomy Int. J. Found. Comput. Sci. The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
1Emilios Cambouropoulos, Maxime Crochemore, Costas S. Iliopoulos, Manal Mohamed, Marie-France Sagot A Pattern Extraction Algorithm for Abstract Melodic Representations that Allow Partial Overlapping of Intervallic Categories. Search on Bibsonomy ISMIR The full citation details ... 2005 DBLP  BibTeX  RDF
1Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot A highly scalable algorithm for the extraction of CIS-regulatory regions. Search on Bibsonomy APBC The full citation details ... 2005 DBLP  BibTeX  RDF
1Pierre Peterlongo, Nadia Pisanti, Frédéric Boyer, Marie-France Sagot Lossless Filter for Finding Long Multiple Approximate Repetitions Using a New Data Structure, the Bi-factor Array. Search on Bibsonomy SPIRE The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
1Julien Allali, Marie-France Sagot A Multiple Graph Layers Model with Application to RNA Secondary Structures Comparison. Search on Bibsonomy SPIRE The full citation details ... 2005 DBLP  DOI  BibTeX  RDF Graph layers, graph comparison, edit distance, secondary structure, RNA
1Vincent Lacroix, Cristina G. Fernandes, Marie-France Sagot Reaction Motifs in Metabolic Networks. Search on Bibsonomy WABI The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
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