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Found 83 publication records. Showing 82 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Muhammad Shahab, Muhammad Waleed Iqbal, Abbas Ahmad, Fahad M. Alshabrmi, Dong-Qing Wei, Abbas Khan, Guojun Zheng |
Immunoinformatics-driven In silico vaccine design for Nipah virus (NPV): Integrating machine learning and computational epitope prediction.  |
Comput. Biol. Medicine  |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Abdul Nasir, Abdus Samad, Sami Ullah, Arif Ali, Dong-Qing Wei, Bai Qian |
Omicron variant (B.1.1.529) challenge the integrity of blood brain barrier: Evidence from protein structural analysis. |
Comput. Biol. Medicine |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Chen Zhang, Junhui Gao, Hong-Yu Chen, Lingxin Kong, Guangshuo Cao, Xiangyu Guo, Wei Liu, Bin Ren, Dong-Qing Wei |
STGIC: A graph and image convolution-based method for spatial transcriptomic clustering. |
PLoS Comput. Biol. |
2024 |
DBLP DOI BibTeX RDF |
|
| 1 | Heqi Sun, Jianmin Wang, Hongyan Wu, Shenggeng Lin, Junwei Chen, Jinghua Wei, Shuai Lv, Yi Xiong, Dong-Qing Wei |
A Multimodal Deep Learning Framework for Predicting PPI-Modulator Interactions. |
J. Chem. Inf. Model. |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Jing Zhao, Bowen Zhao, Xiaotong Song, Chujun Lyu, Weizhi Chen, Yi Xiong, Dong-Qing Wei |
Subtype-DCC: decoupled contrastive clustering method for cancer subtype identification based on multi-omics data. |
Briefings Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Yitian Fang, Fan Xu, Lesong Wei, Yi Jiang, Jie Chen 0001, Leyi Wei, Dong-Qing Wei |
AFP-MFL: accurate identification of antifungal peptides using multi-view feature learning. |
Briefings Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
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| 1 | Asma Sindhoo Nangraj, Saima Sipy, Abbas Khan, Gurudeeban Selvaraj, Abdulrahman Alshammari, Mark E. Casida, Dong-Qing Wei |
ESOMIR: a curated database of biomarker genes and miRNAs associated with esophageal cancer. |
Database J. Biol. Databases Curation |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Yitian Fang, Yi Jiang, Leyi Wei, Qin Ma, Zhixiang Ren, Qianmu Yuan, Dong-Qing Wei |
DeepProSite: structure-aware protein binding site prediction using ESMFold and pretrained language model. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Abbas Khan, Shoaib Adil, Hafiza Ayesha Qudsia, Yasir Waheed, Fahad M. Alshabrmi, Dong-Qing Wei |
Structure-based design of promising natural products to inhibit thymidylate kinase from Monkeypox virus and validation using free energy calculations. |
Comput. Biol. Medicine |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Wenfeng Li, Farah Bano, Abbas Khan, Dong-Qing Wei, Abdulrahman Alshammari, Bin Xu, Yanjing Wang 0003 |
Inhibition of cMYC-MAX transcription factors hetero-dimerization with structurally engineered omoMYC to downregulate oncogenic pathways in renal carcinoma. |
Comput. Biol. Medicine |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Yifan Jin, Addeela Fayyaz, Ayesha Liaqat, Abbas Khan, Abdulrahman Alshammari, Yanjing Wang 0003, Ruo-Xu Gu, Dong-Qing Wei |
Proteomics-based vaccine targets annotation and design of subunit and mRNA-based vaccines for Monkeypox virus (MPXV) against the recent outbreak. |
Comput. Biol. Medicine |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Jie Chen 0001, Zhiwei Nie, Yu Wang, Kai Wang, Fan Xu, Zhiheng Hu, Bing Zheng, Zhennan Wang, Guoli Song, Jingyi Zhang, Jie Fu, Xiansong Huang, Zhongqi Wang, Zhixiang Ren, Qiankun Wang, Daixi Li, Dongqing Wei, Bin Zhou, Chao Yang, Yonghong Tian 0001 |
Running ahead of evolution - AI-based simulation for predicting future high-risk SARS-CoV-2 variants. |
Int. J. High Perform. Comput. Appl. |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Hongwei Chen, Yunpeng Cai, Chaojie Ji, Gurudeeban Selvaraj, Dongqing Wei, Hongyan Wu |
AdaPPI: identification of novel protein functional modules via adaptive graph convolution networks in a protein-protein interaction network. |
Briefings Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Zhaobin Xu, Dongqing Wei, Qiangcheng Zeng, Hongmei Zhang, Yinghui Sun, Jacques Demongeot |
More or less deadly? A mathematical model that predicts SARS-CoV-2 evolutionary direction. |
Comput. Biol. Medicine |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Keliang Zhao, Jovial Niyogisubizo, Linxia Xiao, Yi Pan 0001, Dongqing Wei, Didi Rosiyadi, Yanjie Wei |
A Novel Deep Learning Approach Featuring Graph-Based Algorithm for Cell Segmentation and Tracking. |
BIBM |
2023 |
DBLP DOI BibTeX RDF |
|
| 1 | Shenggeng Lin, Yanjing Wang 0003, Lingfeng Zhang, Yanyi Chu, Yatong Liu, Yitian Fang, Mingming Jiang, Qiankun Wang, Bowen Zhao, Yi Xiong, Dong-Qing Wei |
MDF-SA-DDI: predicting drug-drug interaction events based on multi-source drug fusion, multi-source feature fusion and transformer self-attention mechanism. |
Briefings Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yi Cao, Zhen-Qun Yang, Xu-Lu Zhang, Wenqi Fan, Yaowei Wang 0001, Jiajun Shen, Dong-Qing Wei, Qing Li 0001, Xiao-Yong Wei |
Identifying the kind behind SMILES - anatomical therapeutic chemical classification using structure-only representations. |
Briefings Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yaning Yang, Xiaoqi Wang, Deshan Zhou, Dong-Qing Wei, Shaoliang Peng |
SVPath: an accurate pipeline for predicting the pathogenicity of human exon structural variants. |
Briefings Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yanyi Chu, Yan Zhang, Qiankun Wang, Lingfeng Zhang, Xuhong Wang, Yanjing Wang 0003, Dennis Russell Salahub, Qin Xu, Jianmin Wang, Xue Jiang, Yi Xiong, Dong-Qing Wei |
A transformer-based model to predict peptide-HLA class I binding and optimize mutated peptides for vaccine design. |
Nat. Mach. Intell. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Abbas Khan, Wenfeng Li, Amna Ambreen, Dong-Qing Wei, Yanjing Wang 0003, Yuanshen Mao |
A protein coupling and molecular simulation analysis of the clinical mutants of androgen receptor revealed a higher binding for Leupaxin, to increase the prostate cancer invasion and motility. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Fahad Humayun, Abbas Khan, Sajjad Ahmad, Wang Yuchen, Guoshen Wei, N. Nizam-Uddin, Zahid Hussain, Wajid Khan, Nasib Zaman, Muhammad Rizwan, Muhammad Waseem, Dong-Qing Wei |
Abrogation of SARS-CoV-2 interaction with host (NRP1) neuropilin-1 receptor through high-affinity marine natural compounds to curtail the infectivity: A structural-dynamics data. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
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| 1 | Athar Shafiq, Farrukh Zubair, Amna Ambreen, Muhammad Suleman, Qudsia Yousafi, Zahid Rasul Niazi, Zeeshan Anwar, Abbas Khan, Anwar Mohammad, Dong-Qing Wei |
Investigation of the binding and dynamic features of A.30 variant revealed higher binding of RBD for hACE2 and escapes the neutralizing antibody: A molecular simulation approach. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Abdullah Shah, Saira Rehmat, Iqra Aslam, Muhmmad Suleman, Farah Batool, Abdul Aziz, Farooq Rashid, Midrarullah, Muhmmad Asif Nawaz, Syed Shujait Ali, Muhammad Junaid, Abbas Khan, Dong-Qing Wei |
Comparative mutational analysis of SARS-CoV-2 isolates from Pakistan and structural-functional implications using computational modelling and simulation approaches. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Abbas Khan, Sarfaraz Hussain, Sajjad Ahmad, Muhammad Suleman, Imrana Bukhari, Taimoor Khan, Farooq Rashid, Abul Kalam Azad, Muhammad Waseem, Wajid Khan, Zahid Hussain, Asghar Khan, Syed Shujait Ali, Qiyao Qin, Dong-Qing Wei |
Computational modelling of potentially emerging SARS-CoV-2 spike protein RBDs mutations with higher binding affinity towards ACE2: A structural modelling study. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ismail Shah, Sehrooz Jamil, Saira Rehmat, Hammad Ahmad Butt, Syed Shujait Ali, Muhammad Idrees, Yifei Zhan, Zahid Hussain, Shahid Ali, Muhammad Waseem, Arshad Iqbal, Sajjad Ahmad, Abbas Khan, Yanjing Wang 0003, Dong-Qing Wei |
Evaluation and identification of essential therapeutic proteins and vaccinomics approach towards multi-epitopes vaccine designing against Legionella pneumophila for immune response instigation. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Imtiaz Ali, Abbas Khan, Zhang Fa, Taimoor Khan, Dong-Qing Wei, Jianting Zheng |
Crystal structure of Acetyl-CoA carboxylase (AccB) from Streptomyces antibioticus and insights into the substrate-binding through in silico mutagenesis and biophysical investigations. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Shenggeng Lin, Guangwei Zhang, Dong-Qing Wei, Yi Xiong |
DeepPSE: Prediction of polypharmacy side effects by fusing deep representation of drug pairs and attention mechanism. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Aamir Mehmood, Sadia Nawab, Yanjing Wang 0003, Aman Chandra Kaushik, Dong-Qing Wei |
Discovering potent inhibitors against the Mpro of the SARS-CoV-2. A medicinal chemistry approach. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Muhammad Suleman, Uzair Asad, Shafia Arshad, Ayaz ur Rahman, Fazal Akbar, Haji Khan, Zahid Hussain, Syed Shujait Ali, Anwar Mohammad, Abbas Khan, Liaqat Ali, Dong-Qing Wei |
Screening of immune epitope in the proteome of the Dabie bandavirus, SFTS, to design a protein-specific and proteome-wide vaccine for immune response instigation using an immunoinformatics approaches. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Taimoor Khan, Muhammad Suleman, Syed Shujait Ali, Muhammad Farhan Sarwar, Imtiaz Ali, Liaqat Ali, Abbas Khan, Bakht Rokhan, Yanjing Wang 0003, Ruili Zhao, Dong-Qing Wei |
Subtractive proteomics assisted therapeutic targets mining and designing ensemble vaccine against Candida auris for immune response induction. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Shenggeng Lin, Weizhi Chen, Gengwang Chen, Songchi Zhou, Dong-Qing Wei, Yi Xiong |
MDDI-SCL: predicting multi-type drug-drug interactions via supervised contrastive learning. |
J. Cheminformatics |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Tianyu Wang, Wenming Yang, Jie Chen 0001, Yonghong Tian, Dong-Qing Wei |
ConformerDTI: Local Features Coupling Global Representations for Drug-Target Interaction Prediction. |
BIBM |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Fahad Humayun, Yutong Cai, Abbas Khan, Syed Ali Farhan, Fatima Khan, Usman Ishrat Rana, Anum binte Qamar, Nasim Fawad, Shazia Shamas, Dongqing-Wei |
Structure-guided design of multi-epitopes vaccine against variants of concern (VOCs) of SARS-CoV-2 and validation through In silico cloning and immune simulations. |
Comput. Biol. Medicine |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Zhiwen Shi, Yanyi Chu, Yonghong Zhang, Yanjing Wang 0003, Dong-Qing Wei |
Prediction of Blood-Brain Barrier Permeability of Compounds by Fusing Resampling Strategies and eXtreme Gradient Boosting. |
IEEE Access |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Nazia Azim, Nadeem Iqbal 0002, Jamil Ahmad, Mukhtaj Khan, Amnah Siddiqa, Javaria Ashraf, Abbas Khan, Dong-Qing Wei |
A Static Analysis of Wnt/β-Catenin and Wnt/Ca2+ Biological Regulatory Networks for ARVC Using Automata Network Model. |
IEEE Access |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Nagina Inayat, Mukhtaj Khan, Nadeem Iqbal 0002, Salman Khan 0005, Mushtaq Raza, Dost Muhammad Khan, Abbas Khan, Dong-Qing Wei |
iEnhancer-DHF: Identification of Enhancers and Their Strengths Using Optimize Deep Neural Network With Multiple Features Extraction Methods. |
IEEE Access |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Dong-Qing Wei, Aman Chandra Kaushik, Gurudeeban Selvaraj, Yi Pan 0001 |
Editorial: Computational Genomics and Molecular Medicine for Emerging COVID-19. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Deshan Zhou, Shaoliang Peng, Dong-Qing Wei, Wu Zhong, Yutao Dou, Xiaolan Xie |
LUNAR : Drug Screening for Novel Coronavirus Based on Representation Learning Graph Convolutional Network. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Aman Chandra Kaushik, Aamir Mehmood, Gurudeeban Selvaraj, Xiaofeng Dai, Yi Pan 0001, Dong-Qing Wei |
CoronaPep: An Anti-Coronavirus Peptide Generation Tool. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Aamir Mehmood, Aman Chandra Kaushik, Qiankun Wang, Cheng-Dong Li, Dong-Qing Wei |
Bringing Structural Implications and Deep Learning-Based Drug Identification for KRAS Mutants. |
J. Chem. Inf. Model. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Yanyi Chu, Aman Chandra Kaushik, Xiangeng Wang, Wei Wang 0309, Yufang Zhang, Xiaoqi Shan, Dennis Russell Salahub, Yi Xiong, Dong-Qing Wei |
DTI-CDF: a cascade deep forest model towards the prediction of drug-target interactions based on hybrid features. |
Briefings Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Wei Wang 0309, Qiuying Dai, Fang Li, Yi Xiong, Dong-Qing Wei |
MLCDForest: multi-label classification with deep forest in disease prediction for long non-coding RNAs. |
Briefings Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Aman Chandra Kaushik, Yanjing Wang 0003, Xiangeng Wang, Dong-Qing Wei |
Irinotecan and vandetanib create synergies for treatment of pancreatic cancer patients with concomitant TP53 and KRAS mutations. |
Briefings Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Yanyi Chu, Xiaoqi Shan, Tianhang Chen, Mingming Jiang, Yanjing Wang 0003, Qiankun Wang, Dennis Russell Salahub, Yi Xiong, Dong-Qing Wei |
DTI-MLCD: predicting drug-target interactions using multi-label learning with community detection method. |
Briefings Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Mingming Jiang, Bowen Zhao, Shenggan Luo, Qiankun Wang, Yanyi Chu, Tianhang Chen, Xueying Mao, Yatong Liu, Yanjing Wang 0003, Xue Jiang, Dong-Qing Wei, Yi Xiong |
NeuroPpred-Fuse: an interpretable stacking model for prediction of neuropeptides by fusing sequence information and feature selection methods. |
Briefings Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Yanyi Chu, Xuhong Wang, Qiuying Dai, Yanjing Wang 0003, Qiankun Wang, Shaoliang Peng, Xiaoyong Wei, Jingfei Qiu, Dennis Russell Salahub, Yi Xiong, Dong-Qing Wei |
MDA-GCNFTG: identifying miRNA-disease associations based on graph convolutional networks via graph sampling through the feature and topology graph. |
Briefings Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Taimoor Khan, Abbas Khan, Dong-Qing Wei |
MMV-db: vaccinomics and RNA-based therapeutics database for infectious hemorrhagic fever-causing mammarenaviruses. |
Database J. Biol. Databases Curation |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Abbas Khan, Taimoor Khan, Syed Nouman Nasir, Syed Shujait Ali, Muhammad Suleman, Muhammad Rizwan, Muhammad Waseem, Shahid Ali, Xia Zhao, Dong-Qing Wei |
BC-TFdb: a database of transcription factor drivers in breast cancer. |
Database J. Biol. Databases Curation |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Muhammad Tahir Ul Qamar, Sajjad Ahmad, Abbas Khan, Muhammad Usman Mirza, Sarfraz Ahmad, Asma Abro, Ling-Ling Chen, Ahmad Almatroudi, Dong-Qing Wei |
Structural probing of HapR to identify potent phytochemicals to control Vibrio cholera through integrated computational approaches. |
Comput. Biol. Medicine |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Adnan Zeb, Syed Shujait Ali, Abul Kalam Azad, Muhammad Safdar, Zeeshan Anwar, Muhammad Suleman, N. Nizam-Uddin, Abbas Khan, Dong-Qing Wei |
Genome-wide screening of vaccine targets prioritization and reverse vaccinology aided design of peptides vaccine to enforce humoral immune response against Campylobacter jejuni. |
Comput. Biol. Medicine |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Qiuying Dai, Yanyi Chu, Zhiqi Li, Yusong Zhao, Xueying Mao, Yanjing Wang 0003, Yi Xiong, Dong-Qing Wei |
MDA-CF: Predicting MiRNA-Disease associations based on a cascade forest model by fusing multi-source information. |
Comput. Biol. Medicine |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Taimoor Khan, Abbas Khan, Syed Nouman Nasir, Sajjad Ahmad, Syed Shujait Ali, Dong-Qing Wei |
CytomegaloVirusDb: Multi-omics knowledge database for cytomegaloviruses. |
Comput. Biol. Medicine |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Muhammad Suleman, Qudsia Yousafi, Javaid Ali, Syed Shujait Ali, Zahid Hussain, Shahid Ali, Muhammad Waseem, Arshad Iqbal, Sajjad Ahmad, Abbas Khan, Yanjing Wang 0003, Dong-Qing Wei |
Bioinformatics analysis of the differences in the binding profile of the wild-type and mutants of the SARS-CoV-2 spike protein variants with the ACE2 receptor. |
Comput. Biol. Medicine |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Abbas Khan, Shahzeb Khan, Shoaib Saleem, N. Nizam-Uddin, Anwar Mohammad, Taimoor Khan, Sajjad Ahmad, Muhammad Arshad 0013, Syed Shujait Ali, Muhammad Suleman, Dong-Qing Wei |
Immunogenomics guided design of immunomodulatory multi-epitope subunit vaccine against the SARS-CoV-2 new variants, and its validation through in silico cloning and immune simulation. |
Comput. Biol. Medicine |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Aman Chandra Kaushik, Aamir Mehmood, Ajay Kumar, Ankit Babu, Dong-Qing Wei, Zhongming Zhao |
Mining Cancer Cell Line-Based Drugs to Benefit KRAS(G12D) Pancreatic Adenocarcinoma Patients. |
BIBM |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Aman Chandra Kaushik, Qiqi Wu, Li Lin, Haibo Li, Longqi Zhao, Zilu Wen, Yanzheng Song, Qihang Wu, Jin Wang, Xiaokui Guo, Hualin Wang, Xiaoli Yu, Dongqing Wei, Shulin Zhang |
Exosomal ncRNAs profiling of mycobacterial infection identified miRNA-185-5p as a novel biomarker for tuberculosis. |
Briefings Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Bin Xin, Yaning Yang, Dongqing Wei, Shaoliang Peng |
CFCN: A Multi-scale Fully Convolutional Network with Dilated Convolution for Nuclei Classification and Localization. |
ISBRA |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Shaozhen Ding, Yu Tian 0006, Pengli Cai, Dachuan Zhang, Xingxiang Cheng, Dandan Sun, Le Yuan, Junni Chen, Weizhong Tu, Dong-Qing Wei, Qian-Nan Hu |
novoPathFinder: a webserver of designing novel-pathway with integrating GEM-model. |
Nucleic Acids Res. |
2020 |
DBLP DOI BibTeX RDF |
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| 1 | Wei Wang 0309, Xiaoqing Guan, Muhammad Tahir Khan, Yi Xiong, Dong-Qing Wei |
LMI-DForest: A deep forest model towards the prediction of lncRNA-miRNA interactions. |
Comput. Biol. Chem. |
2020 |
DBLP DOI BibTeX RDF |
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| 1 | Xiaoyi Feng, Shaoliang Peng, Fei Li, Ying Xu, Xiangxiang Zeng, Dong-Qing Wei, Yunhao Liu 0001 |
A drug information embedding method based on graph convolution neural network. |
HealthCom |
2020 |
DBLP DOI BibTeX RDF |
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| 1 | Shaoliang Peng, Xiaoyu Zhang 0008, Wenhe Su, Dong Dong, Yutong Lu, Xiangke Liao, Kai Lu, Canqun Yang, Jie Liu 0002, Weiliang Zhu, Dongqing Wei |
High-Scalable Collaborated Parallel Framework for Large-Scale Molecular Dynamic Simulation on Tianhe-2 Supercomputer. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2020 |
DBLP DOI BibTeX RDF |
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| 1 | Satyavani Kaliamurthi, Gurudeeban Selvaraj, Sathishkumar Chinnasamy, Qian Wang 0001, Asma Sindhoo Nangraj, William C. S. Cho, Keren Gu, Dong-Qing Wei |
Immunomics Datasets and Tools: To Identify Potential Epitope Segments for Designing Chimeric Vaccine Candidate to Cervix Papilloma. |
Data |
2019 |
DBLP DOI BibTeX RDF |
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| 1 | Xiaoqi Shan, Xiangeng Wang, Cheng-Dong Li, Yanyi Chu, Yufang Zhang, Yi Xiong, Dong-Qing Wei |
Prediction of CYP450 Enzyme-Substrate Selectivity Based on the Network-Based Label Space Division Method. |
J. Chem. Inf. Model. |
2019 |
DBLP DOI BibTeX RDF |
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| 1 | Cheng-Dong Li, Muhammad Junaid, Hui Chen, Arif Ali, Dong-Qing Wei |
Helix-Switch Enables C99 Dimer Transition between the Multiple Conformations. |
J. Chem. Inf. Model. |
2019 |
DBLP DOI BibTeX RDF |
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| 1 | Muhammad Junaid, Muhammad Tahir Khan, Shaukat Iqbal Malik, Dong-Qing Wei |
Insights into the Mechanisms of the Pyrazinamide Resistance of Three Pyrazinamidase Mutants N11K, P69T, and D126N. |
J. Chem. Inf. Model. |
2019 |
DBLP DOI BibTeX RDF |
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| 1 | Ling Liu, Yi Xiong, Hongyun Gao, Dong-Qing Wei, Julie C. Mitchell, Xiaolei Zhu |
dbAMEPNI: a database of alanine mutagenic effects for protein-nucleic acid interactions. |
Database J. Biol. Databases Curation |
2018 |
DBLP DOI BibTeX RDF |
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| 1 | Gurudeeban Selvaraj, Satyavani Kaliamurthi, Aman Chandra Kaushik, Abbas Khan, Yong-Kai Wei, William C. S. Cho, Keren Gu, Dong-Qing Wei |
Identification of target gene and prognostic evaluation for lung adenocarcinoma using gene expression meta-analysis, network analysis and neural network algorithms. |
J. Biomed. Informatics |
2018 |
DBLP DOI BibTeX RDF |
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| 1 | Abbas Khan, Arif Ali, Muhammad Junaid, Chang Liu, Aman Chandra Kaushik, William C. S. Cho, Dong-Qing Wei |
Identification of novel drug targets for diamond-blackfan anemia based on RPS19 gene mutation using protein-protein interaction network. |
BMC Syst. Biol. |
2018 |
DBLP DOI BibTeX RDF |
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| 1 | Weizhong Tu, Shaozhen Ding, Ling Wu, Zhe Deng, Hui Zhu 0004, Xiaotong Xu, Chen Lin, Chaonan Ye, Minlu Han, Mengna Zhao, Juan Liu 0007, Zixin Deng, Junni Chen, Dong-Qing Wei, Qian-Nan Hu |
SynBioEcoli: a comprehensive metabolism network of engineered E. coli in three dimensional visualization. |
Quant. Biol. |
2017 |
DBLP DOI BibTeX RDF |
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| 1 | Shuang Hou, Ruo-Xu Gu, Dong-Qing Wei |
Inhibition of β-Amyloid Channels with a Drug Candidate wgx-50 Revealed by Molecular Dynamics Simulations. |
J. Chem. Inf. Model. |
2017 |
DBLP DOI BibTeX RDF |
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| 1 | Shaoliang Peng, Xiaoyu Zhang 0008, Yutong Lu, Xiangke Liao, Kai Lu, Canqun Yang, Jie Liu 0002, Weiliang Zhu, Dongqing Wei |
mAMBER: A CPU/MIC collaborated parallel framework for AMBER on Tianhe-2 supercomputer. |
BIBM |
2016 |
DBLP DOI BibTeX RDF |
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| 1 | Miaomiao Zhao, Yunpeng Cai, Jiankui He, Guanyu Wang, Dongqing Wei, Yanjie Wei, Caiwan Zhang, Fengfeng Zhou |
Personalized clinical data screening: Special issue on health informatics. |
Comput. Biol. Medicine |
2015 |
DBLP DOI BibTeX RDF |
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| 1 | Qi Chen, John K. Buolamwini, Jeremy C. Smith, Aixiu Li, Qin Xu, Xiaolin Cheng, Dongqing Wei |
Impact of Resistance Mutations on Inhibitor Binding to HIV-1 Integrase. |
J. Chem. Inf. Model. |
2013 |
DBLP DOI BibTeX RDF |
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| 1 | Ying Wang 0055, Xiaolin Wu, Dong-Qing Wei, Yi-Xue Li, Jing-Fang Wang |
Autoinhibitory Mechanism for the Mutation-Induced Impaired FGF9 Signaling. |
J. Chem. Inf. Model. |
2012 |
DBLP DOI BibTeX RDF |
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| 1 | Juan Huo, Alan F. Murray, Dongqing Wei |
Adaptive Visual and Auditory Map Alignment in Barn Owl Superior Colliculus and Its Neuromorphic Implementation. |
IEEE Trans. Neural Networks Learn. Syst. |
2012 |
DBLP DOI BibTeX RDF |
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| 1 | Tao Zhang, Limin Angela Liu, David F. V. Lewis, Dong-Qing Wei |
Long-Range Effects of a Peripheral Mutation on the Enzymatic Activity of Cytochrome P450 1A2. |
J. Chem. Inf. Model. |
2011 |
DBLP DOI BibTeX RDF |
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| 1 | Jue Li, Dong-Qing Wei, Jing-Fang Wang, Yi-Xue Li |
A Negative Cooperativity Mechanism of Human CYP2E1 Inferred from Molecular Dynamics Simulations and Free Energy Calculations. |
J. Chem. Inf. Model. |
2011 |
DBLP DOI BibTeX RDF |
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| 1 | Limin Angela Liu, Dong-Qing Wei, Yixue Li, Huimin Lei (eds.) |
Handbook of Research on Computational and Systems Biology - Interdisciplinary Applications. |
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2011 |
DBLP DOI BibTeX RDF |
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| 1 | Ying Wang 0055, Dongqing Wei, Jing-Fang Wang |
Molecular Dynamics Studies on T1 Lipase: Insight into a Double-Flap Mechanism. |
J. Chem. Inf. Model. |
2010 |
DBLP DOI BibTeX RDF |
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| 1 | Zhiyuan Xie, Tao Zhang, Jing-Fang Wang, Kuo-Chen Chou, Dongqing Wei |
The computational model to predict accurately inhibitory activity for inhibitors towardsCYP3A4. |
Comput. Biol. Medicine |
2010 |
DBLP DOI BibTeX RDF |
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| 1 | Suzanne W. Sirois, George E. Hatzakis, Dongqing Wei, Qishi Du, Kuo-Chen Chou |
Assessment of chemical libraries for their druggability. |
Comput. Biol. Chem. |
2005 |
DBLP DOI BibTeX RDF |
|
| 1 | Suzanne W. Sirois, Dongqing Wei, Qishi Du, Kuo-Chen Chou |
Virtual Screening for SARS-CoV Protease Based on KZ7088 Pharmacophore Points. |
J. Chem. Inf. Model. |
2004 |
DBLP DOI BibTeX RDF |
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