Search results for "Allele"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
102	Sourabh Bhattacharya, Alan E. Gelfand, Kent E. Holsinger	Model fitting and inference under latent equilibrium processes.	Stat. Comput.	2007	DBLP DOI BibTeX RDF	Allele, Migration, Mutation, MCMC, Bayesian hierarchical model
69	Shengxiang Yang, Sima Uyar	Adaptive mutation with fitness and allele distribution correlation for genetic algorithms.	SAC	2006	DBLP DOI BibTeX RDF	fitness and allele distribution correlation, gene based adaptive mutation, genetic algorithms
54	Snehit Prabhu, Itsik Pe'er	Overlapping Pools for High Throughput Targeted Resequencing.	RECOMB	2009	DBLP DOI BibTeX RDF
54	Nico Pfeifer, Oliver Kohlbacher	Multiple Instance Learning Allows MHC Class II Epitope Predictions Across Alleles.	WABI	2008	DBLP DOI BibTeX RDF
54	Robert Ian Bowers, Emre Sevinç	Preserving Variability in Sexual Multi-agent Systems with Diploidy and Dominance.	ESAW	2005	DBLP DOI BibTeX RDF
52	Stephen Dignum, Riccardo Poli	Sub-tree Swapping Crossover, Allele Diffusion and GP Convergence.	PPSN	2008	DBLP DOI BibTeX RDF	Crossover Bias, Allele Diffusion, Genetic Programming, Search, Convergence
48	Ala-Eddine Benrazek, Zineddine Kouahla, Brahim Farou, Hamid Seridi, Imane Allele, Mohamed Amine Ferrag	Tree-based indexing technique for efficient and real-time label retrieval in the object tracking system.	J. Supercomput.	2023	DBLP DOI BibTeX RDF
48	Ala-Eddine Benrazek, Zineddine Kouahla, Brahim Farou, Hamid Seridi, Imane Allele	Introduction of a tree-based technique for efficient and real-time label retrieval in the object tracking system.	CoRR	2022	DBLP DOI BibTeX RDF
42	Ronald Wilders	Alleviating Effects of Long-QT Syndrome Type 2 by Allele-Specific Inhibition of the KCNH2 Mutant Allele.	CinC	2022	DBLP DOI BibTeX RDF
42	Hikaru Takeuchi, Hiroaki Tomita, Yasuyuki Taki, Yoshie Kikuchi, Chiaki Ono, Zhiqian Yu, Atsushi Sekiguchi, Rui Nouchi, Yuka Kotozaki, Seishu Nakagawa, Carlos Makoto Miyauchi, Kunio Iizuka, Ryoichi Yokoyama, Takamitsu Shinada, Yuki Yamamoto, Sugiko Hanawa, Tsuyoshi Araki, Hiroshi Hashizume, Keiko Kunitoki, Yuko Sassa, Ryuta Kawashima	Cognitive and neural correlates of the 5-repeat allele of the dopamine D4 receptor gene in a population lacking the 7-repeat allele.	NeuroImage	2015	DBLP DOI BibTeX RDF
42	Roy Ronen, Glenn Tesler, Ali Akbari, Shay Zakov, Noah A. Rosenberg, Vineet Bafna	Haplotype Allele Frequency (HAF) Score: Predicting Carriers of Ongoing Selective Sweeps Without Knowledge of the Adaptive Allele.	RECOMB	2015	DBLP DOI BibTeX RDF
39	Stefan Wagner 0002, Michael Affenzeller	The Allele Meta-model - Developing a Common Language for Genetic Algorithms.	IWINAC (2)	2005	DBLP DOI BibTeX RDF
39	Will Casey, Bud Mishra	A Nearly Linear-Time General Algorithm for Genome-Wide Bi-allele Haplotype Phasing.	HiPC	2003	DBLP DOI BibTeX RDF
39	Dirk Thierens	Dimensional Analysis of Allele-Wise Mixing Revisited.	PPSN	1996	DBLP DOI BibTeX RDF
21	Qingru Xu, Xiaoqiong Bao, Zhuobin Lin, Lin Tang, Li-na He, Jian Ren 0002, Zhixiang Zuo, Kunhua Hu	AStruct: detection of allele-specific RNA secondary structure in structuromic probing data.	BMC Bioinform.	2024	DBLP DOI BibTeX RDF
21	Ruobing Han, Lei Han, Xunwu Zhao, Qianghui Wang, Yanling Xia, Heping Li	Haplotype-resolved Genome of Sika Deer Reveals Allele-specific Gene Expression and Chromosome Evolution.	Genom. Proteom. Bioinform.	2023	DBLP DOI BibTeX RDF
21	Mohamed N. Saad, Galena W. Zareef, Fatma S. Ibrahim, Ashraf M. Said, Hisham F. A. Hamed	Genome-wide exploratory analysis for NARAC dataset with preparation for haplotype block partitioning through minor allele frequency quality control viewpoint.	Iran J. Comput. Sci.	2023	DBLP DOI BibTeX RDF
21	Turki M. Sobahy, Olaa A. Motwalli, Meshari Alazmi	AllelePred: A Simple Allele Frequencies Ensemble Predictor for Different Single Nucleotide Variants.	IEEE ACM Trans. Comput. Biol. Bioinform.	2023	DBLP DOI BibTeX RDF
21	Thomas A. Delomas, Stuart C. Willis	Estimating microhaplotype allele frequencies from low-coverage or pooled sequencing data.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
21	Zheng Ye, Shaohao Li, Xue Mi, Baoyi Shao, Zhu Dai, Bo Ding, Songwei Feng, Bo Sun, Yang Shen, Zhongdang Xiao	STMHCpan, an accurate Star-Transformer-based extensible framework for predicting MHC I allele binding peptides.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
21	Asia Mendelevich, Saumya Gupta, Aleksei Pakharev, Athanasios Teodosiadis, Andrey A. Mironov, Alexander A. Gimelbrant	Foreign RNA spike-ins enable accurate allele-specific expression analysis at scale.	Bioinform.	2023	DBLP DOI BibTeX RDF
21	Lili Dong, Jianan Wang, Guohua Wang	ASAS-EGB: A statistical framework for estimating allele-specific alternative splicing events using transcriptome data.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
21	Jonathan Soriano, Sarah Marzen	How Well Can We Infer Selection Benefits and Mutation Rates from Allele Frequencies?	Entropy	2023	DBLP DOI BibTeX RDF
21	Aris Paschalidis, Oliver J. Watson, Ozkan Aydemir, Robert Verity, Jeffrey A. Bailey	coiaf: Directly estimating complexity of infection with allele frequencies.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
21	Viet Phuong Hoang, Quang Thinh Trac, Ha-Nam Nguyen, Trung-Nghia Vu	Analysis of Mutant-Allele Isoform Expression of TP53 in Breast Cancer.	KSE	2023	DBLP DOI BibTeX RDF
21	Thomas J. Nicholas, Michael J. Cormier, Aaron R. Quinlan	Annotation of structural variants with reported allele frequencies and related metrics from multiple datasets using SVAFotate.	BMC Bioinform.	2022	DBLP DOI BibTeX RDF
21	Kyle Fletcher, Rongkui Han, Diederik Smilde, Richard Michelmore	Variance of allele balance calculated from low coverage sequencing data infers departure from a diploid state.	BMC Bioinform.	2022	DBLP DOI BibTeX RDF
21	Qiangwei Zhou, Pengpeng Guan, Zhixian Zhu, Sheng Cheng, Cong Zhou, Huanhuan Wang, Qian Xu, Wing-Kin Sung, Guoliang Li 0002	ASMdb: a comprehensive database for allele-specific DNA methylation in diverse organisms.	Nucleic Acids Res.	2022	DBLP DOI BibTeX RDF
21	Alexandr Boytsov, Sergey Abramov, Ariuna Z. Aiusheeva, Alexandra M. Kasianova, Eugene Baulin, Ivan A. Kuznetsov, Yurii S. Aulchenko, Semyon Kolmykov, Ivan S. Yevshin, Fedor A. Kolpakov, Ilya E. Vorontsov, Vsevolod J. Makeev, Ivan V. Kulakovskiy	ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs.	Nucleic Acids Res.	2022	DBLP DOI BibTeX RDF
21	Genelle F. Harrison, Laura Ann Leaton, Erica A. Harrison, Katherine M. Kichula, Marte K. Viken, Jonathan Shortt, Christopher R. Gignoux, Benedicte A. Lie, Damjan Vukcevic, Stephen Leslie, Paul J. Norman	Allele imputation for the killer cell immunoglobulin-like receptor KIR3DL1/S1.	PLoS Comput. Biol.	2022	DBLP DOI BibTeX RDF
21	Gergely Tibély, Dominik Schrempf, Imre Derényi, Gergely J. Szöllosi	Distinguishing excess mutations and increased cell death based on variant allele frequencies.	PLoS Comput. Biol.	2022	DBLP DOI BibTeX RDF
21	Anees Abrol, Ihab Hajjar, Vince D. Calhoun	Probing the link between the APOE-ε4 allele and whole-brain gray matter using deep learning.	EMBC	2022	DBLP DOI BibTeX RDF
21	Xinping Fan, Guanghao Luo, Yu S. Huang	Accucopy: accurate and fast inference of allele-specific copy number alterations from low-coverage low-purity tumor sequencing data.	BMC Bioinform.	2021	DBLP DOI BibTeX RDF
21	Marta Pelizzola, Merle Behr, Housen Li, Axel Munk, Andreas Futschik	Multiple haplotype reconstruction from allele frequency data.	Nat. Comput. Sci.	2021	DBLP DOI BibTeX RDF
21	Jonathon Lefaive, Albert V. Smith, Hyun Min Kang, Gonçalo R. Abecasis	Sparse allele vectors and the savvy software suite.	Bioinform.	2021	DBLP DOI BibTeX RDF
21	Edith M. Ross, Kerstin Haase, Peter Van Loo, Florian Markowetz	Allele-specific multi-sample copy number segmentation in ASCAT.	Bioinform.	2021	DBLP DOI BibTeX RDF
21	Qi Yan 0008, Erick Forno, Juan C. Celedón, Wei Chen 0074, Daniel E. Weeks	CHIT: an allele-specific method for testing the association between molecular quantitative traits and phenotype-genotype interaction.	Bioinform.	2021	DBLP DOI BibTeX RDF
21	Yiming Li, Sanjiv J. Shah, Donna Arnett, Ryan Irvin, Yuan Luo 0001	SNPs Filtered by Allele Frequency Improve the Prediction of Hypertension Subtypes.	CoRR	2021	DBLP BibTeX RDF
21	Aline Silva da Costa, Tácio Vinício Amorim Fernandes, Murilo Lamim Bello, Theo Luiz Ferraz de Souza	Evaluation of potential MHC-I allele-specific epitopes in Zika virus proteins and the effects of mutations on peptide-MHC-I interaction studied using in silico approaches.	Comput. Biol. Chem.	2021	DBLP DOI BibTeX RDF
21	Yiming Li, Sanjiv J. Shah, Donna Arnett, Ryan Irvin, Yuan Luo 0001	SNPs Filtered by Allele Frequency Improve the Prediction of Hypertension Subtypes.	BIBM	2021	DBLP DOI BibTeX RDF
21	Marcus H. Hansen, Peter Hokland, Charlotte G. Nyvold	CNAplot - Software for visual inspection of chromosomal copy number alteration in cancer using juxtaposed sequencing read depth ratios and variant allele frequencies.	SoftwareX	2020	DBLP DOI BibTeX RDF
21	Gan Kok Beng, Kim Soon Chong, Anusha Devi Nawoor, Sue-Mian Then, Nor Azian Abdul Murad, A. Rahman A. Jamal	Development of a HLA-B*58: 01 Allele Screening System for Allopurinol-Induced Severe Cutaneous Adverse Reactions Detection.	IEEE Access	2020	DBLP DOI BibTeX RDF
21	Wenbin Liu, Dongdong Li, Henry Han	Manifold Learning Analysis for Allele-Skewed DNA Modification SNPs for Psychiatric Disorders.	IEEE Access	2020	DBLP DOI BibTeX RDF
21	Ulrich Lautenschlager, Florian Wagner 0008, Christoph Oberprieler	AllCoPol: inferring allele co-ancestry in polyploids.	BMC Bioinform.	2020	DBLP DOI BibTeX RDF
21	Qiangwei Zhou, Ze Wang 0011, Jing Li, Wing-Kin Sung, Guoliang Li 0002	MethHaplo: combining allele-specific DNA methylation and SNPs for haplotype region identification.	BMC Bioinform.	2020	DBLP DOI BibTeX RDF
21	Justin Remer, Douglas C. Dean III, Kewei Chen 0001, Rebecca A. Reiman, Matthew J. Huentelman, Eric M. Reiman, Sean C. L. Deoni	Longitudinal white matter and cognitive development in pediatric carriers of the apolipoprotein ε4 allele.	NeuroImage	2020	DBLP DOI BibTeX RDF
21	Faviel F. Gonzalez-Galarza, Antony McCabe, Eduardo José Melo dos Santos, James Jones, Louise Y. C. Takeshita, Nestor D. Ortega-Rivera, Glenda M. Del Cid-Pavon, Kerry Ramsbottom, Gurpreet S. Ghattaoraya, Ana Alfirevic, Derek Middleton, Andrew R. Jones	Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools.	Nucleic Acids Res.	2020	DBLP DOI BibTeX RDF
21	Jui Wan Loh, Caitlin Guccione, Frances Di Clemente, Gregory M. Riedlinger, Shridar Ganesan, Hossein Khiabanian	All-FIT: allele-frequency-based imputation of tumor purity from high-depth sequencing data.	Bioinform.	2020	DBLP DOI BibTeX RDF
21	Emmanuel L. P. Dumont, Benjamin Tycko, Catherine Do	CloudASM: an ultra-efficient cloud-based pipeline for mapping allele-specific DNA methylation.	Bioinform.	2020	DBLP DOI BibTeX RDF
21	Charlotte A. Darby, Michael J. T. Stubbington, Patrick J. Marks, Álvaro Martínez Barrio, Ian T. Fiddes	scHLAcount: allele-specific HLA expression from single-cell gene expression data.	Bioinform.	2020	DBLP DOI BibTeX RDF
21	Lili Dong, Jianan Wang, Guohua Wang	BYASE: a Python library for estimating gene and isoform level allele-specific expression.	Bioinform.	2020	DBLP DOI BibTeX RDF
21	Ren-Hua Chung, Chen-Yu Kang	pWGBSSimla: a profile-based whole-genome bisulfite sequencing data simulator incorporating methylation QTLs, allele-specific methylations and differentially methylated regions.	Bioinform.	2020	DBLP DOI BibTeX RDF
21	Víctor Gutiérrez-de Pablo, Carlos Gómez, Jesús Poza, Aaron Maturana-Candelas, Sandra Martins, Iva Gomes, Alexandra M. Lopes, Nadia Pinto, Roberto Hornero	Relationship between the Presence of the ApoE ε4 Allele and EEG Complexity along the Alzheimer's Disease Continuum.	Sensors	2020	DBLP DOI BibTeX RDF
21	Caitlin F. Harrigan, Yulia Rubanova, Quaid Morris, Alina Selega	TrackSigFreq: Subclonal Reconstructions Based on Mutation Signatures and Allele Frequencies.	PSB	2020	DBLP BibTeX RDF
21	George Alexandrou, Jesus Rodriguez-Manzano, Kenny Malpartida-Cardenas, Pantelis Georgiou, Chris Toumazou, Melpomeni Kalofonou	In-Silico Automated Allele-Specific Primer Design for Loop-Mediated Isothermal Amplification.	ISCAS	2020	DBLP DOI BibTeX RDF
21	Hua Chen 0010	A Computational Approach for Modeling the Allele Frequency Spectrum of Populations with Arbitrarily Varying Size.	Genom. Proteom. Bioinform.	2019	DBLP DOI BibTeX RDF
21	Jing Xie 0008, Tieming Ji, Marco A. R. Ferreira, Yahan Li, Bhaumik N. Patel, Rocio M. Rivera	Modeling allele-specific expression at the gene and SNP levels simultaneously by a Bayesian logistic mixed regression model.	BMC Bioinform.	2019	DBLP DOI BibTeX RDF
21	Nora von Thenen, Erman Ayday, A. Ercüment Çiçek	Re-identification of individuals in genomic data-sharing beacons via allele inference.	Bioinform.	2019	DBLP DOI BibTeX RDF
21	Zhaoyang Li, Cen Wang, Ziying Wang, Chenggang Zhu, Jie Li 0064, Tian Sha, Lixiang Ma, Chao Gao, Yi Yang, Yimin Sun, Jian Wang, Xiaoli Sun, Chenqi Lu, Marian Difiglia, Yanai Mei, Chen Ding, Shouqing Luo, Yongjun Dang, Yu Ding, Yiyan Fei, Boxun Lu	Allele-selective lowering of mutant HTT protein by HTT-LC3 linker compounds.	Nat.	2019	DBLP DOI BibTeX RDF
21	Kye Hwa Lee, Yi-Jun Kim, Hyo-Jung Kim, Ju Han Kim	HLA Allele Distribution Associated with Adverse Drug Reactions in Organ Transplant Patients.	MedInfo	2019	DBLP DOI BibTeX RDF
21	Lan Lin, Yuchao Wu, Xuetao Wu, Shuicai Wu	APOE-ε4 allele load modifies the brain aging process in cognitively normal late middle aged and older adults.	AIIPCC	2019	DBLP DOI BibTeX RDF
21	Hyoyoung Choo-Wosoba, Paul S. Albert, Bin Zhu	hsegHMM: hidden Markov model-based allele-specific copy number alteration analysis accounting for hypersegmentation.	BMC Bioinform.	2018	DBLP DOI BibTeX RDF
21	Narayanan Raghupathy, Kwangbom Choi, Matthew J. Vincent, Glen L. Beane, Keith S. Sheppard, Steven C. Munger, Ron Korstanje, Fernando Pardo-Manual de Villena, Gary A. Churchill	Hierarchical analysis of RNA-seq reads improves the accuracy of allele-specific expression.	Bioinform.	2018	DBLP DOI BibTeX RDF
21	Peng Zhang 0033, Benedetta Bigio, Franck Rapaport, Shen-Ying Zhang, Jean-Laurent Casanova, Laurent Abel, Bertrand Boisson, Yuval Itan	PopViz: a webserver for visualizing minor allele frequencies and damage prediction scores of human genetic variations.	Bioinform.	2018	DBLP DOI BibTeX RDF
21	Gabriel Renaud	glactools: a command-line toolset for the management of genotype likelihoods and allele counts.	Bioinform.	2018	DBLP DOI BibTeX RDF
21	Cynthia A. Kalita, Gregory A. Moyerbrailean, Christopher Brown, Xiaoquan Wen, Francesca Luca, Roger Pique-Regi	QuASAR-MPRA: accurate allele-specific analysis for massively parallel reporter assays.	Bioinform.	2018	DBLP DOI BibTeX RDF
21	Weilong Guo, Ping Zhu 0002, Matteo Pellegrini, Michael Q. Zhang, Xiangfeng Wang, Zhongfu Ni	CGmapTools improves the precision of heterozygous SNV calls and supports allele-specific methylation detection and visualization in bisulfite-sequencing data.	Bioinform.	2018	DBLP DOI BibTeX RDF
21	Soroush Samadian, Jeff P. Bruce, Trevor J. Pugh	Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets.	PLoS Comput. Biol.	2018	DBLP DOI BibTeX RDF
21	Ashok Rajaraman, Jian Ma 0004	Toward Recovering Allele-specific Cancer Genome Graphs.	J. Comput. Biol.	2018	DBLP DOI BibTeX RDF
21	Nathan Medina-Rodríguez, Ángelo Santana	Allele Imputation and Haplotype Determination from Databases Composed of Nuclear Families.	R J.	2017	DBLP DOI BibTeX RDF
21	Emmanouil Viennas, Angeliki Komianou, Clint Mizzi, Maja Stojiljkovic, Christina Mitropoulou, Juha Muilu, Mauno Vihinen, Panagiota Grypioti, Styliani Papadaki, Cristiana Pavlidis, Branka Zukic, Theodora Katsila, Peter J. van der Spek, Sonja Pavlovic, Giannis Tzimas, George P. Patrinos	Expanded national database collection and data coverage in the FINDbase worldwide database for clinically relevant genomic variation allele frequencies.	Nucleic Acids Res.	2017	DBLP DOI BibTeX RDF
21	Thomas O. McDonald, Marek Kimmel	Multitype infinite-allele branching processes in continuous time.	J. Appl. Probab.	2017	DBLP DOI BibTeX RDF
21	Bryan T. Weinstein, Maxim O. Lavrentovich, Wolfram Möbius, Andrew W. Murray, David R. Nelson	Genetic drift and selection in many-allele range expansions.	PLoS Comput. Biol.	2017	DBLP DOI BibTeX RDF
21	Hsiao-Han Chang, Colin J. Worby, Adoke Yeka, Joaniter Nankabirwa, Moses R. Kamya, Sarah G. Staedke, Grant Dorsey, Maxwell Murphy, Daniel E. Neafsey, Anna E. Jeffreys, Christina Hubbart, Kirk A. Rockett, Roberto Amato, Dominic Kwiatkowski, Caroline O. Buckee, Bryan Greenhouse	THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites.	PLoS Comput. Biol.	2017	DBLP DOI BibTeX RDF
21	Ashok Rajaraman, Jian Ma 0004	Towards Recovering Allele-Specific Cancer Genome Graphs.	RECOMB	2017	DBLP DOI BibTeX RDF
21	Naoki Nariai, Kaname Kojima, Takahiro Mimori, Yosuke Kawai, Masao Nagasaki	A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes.	BMC Genom.	2016	DBLP DOI BibTeX RDF
21	Susanna Zucca, Margherita Villaraggia, Stella Gagliardi, Gaetano Salvatore Grieco, Marialuisa Valente, Cristina Cereda, Paolo Magni	Analysis of amplicon-based NGS data from neurological disease gene panels: a new method for allele drop-out management.	BMC Bioinform.	2016	DBLP DOI BibTeX RDF
21	Alan Hodgkinson, Jean-Christophe Grenier, Elias Gbeha, Philip Awadalla	A haplotype-based normalization technique for the analysis and detection of allele specific expression.	BMC Bioinform.	2016	DBLP DOI BibTeX RDF
21	Qi Zhang, Xin Zeng, Samuel G. Younkin, Trupti Kawli, Michael P. Snyder, Sündüz Keles	Systematic evaluation of the impact of ChIP-seq read designs on genome coverage, peak identification, and allele-specific binding detection.	BMC Bioinform.	2016	DBLP DOI BibTeX RDF
21	Qian S. Zhang, Brian L. Browning, Sharon R. Browning	ASAFE: ancestry-specific allele frequency estimation.	Bioinform.	2016	DBLP DOI BibTeX RDF
21	Zhi Liu, Tuantuan Gui, Zhen Wang, Hong Li 0013, Yunhe Fu, Xiao Dong, Yixue Li	cisASE: a likelihood-based method for detecting putative cis-regulated allele-specific expression in RNA sequencing data.	Bioinform.	2016	DBLP DOI BibTeX RDF
21	Yuxian Zhang, Xiao-Yi Qian, Hui-Deng Peng, Jianhui Wang	An Allele Real-Coded Quantum Evolutionary Algorithm Based on Hybrid Updating Strategy.	Comput. Intell. Neurosci.	2016	DBLP DOI BibTeX RDF
21	Yang Li, Shiguo Zhou, David C. Schwartz, Jian Ma 0004	Allele-Specific Quantification of Structural Variations in Cancer Genomes.	RECOMB	2016	DBLP BibTeX RDF
21	Marissa A. Gorlick, Darrell A. Worthy, Valerie S. Knopik, John E. McGeary, Christopher G. Beevers, W. Todd Maddox	DRD4 Long Allele Carriers Show Heightened Attention to High-priority Items Relative to Low-priority Items.	J. Cogn. Neurosci.	2015	DBLP DOI BibTeX RDF
21	Vikas Bansal 0001, Ondrej Libiger	Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations.	BMC Bioinform.	2015	DBLP DOI BibTeX RDF
21	Jesper Gådin, Ferdinand van't Hooft, Per Eriksson, Lasse Folkersen	AllelicImbalance: an R/ bioconductor package for detecting, managing, and visualizing allele expression imbalance data from RNA sequencing.	BMC Bioinform.	2015	DBLP DOI BibTeX RDF
21	Christopher W. N. Saville, Thomas M. Lancaster, Timothy J. Davies, Maida Toumaian, Eleni Pappa, Simon Fish, Bernd Feige, Stephan Bender, Kiran K. Mantripragada, David E. J. Linden, Christoph Klein 0004	Elevated P3b latency variability in carriers of ZNF804A risk allele for psychosis.	NeuroImage	2015	DBLP DOI BibTeX RDF
21	Toomas Haller, Mart Kals, Tõnu Esko, Reedik Mägi, Krista Fischer	RegScan: a GWAS tool for quick estimation of allele effects on continuous traits and their combinations.	Briefings Bioinform.	2015	DBLP DOI BibTeX RDF
21	Faviel F. Gonzalez-Galarza, Louise Y. C. Takeshita, Eduardo José Melo dos Santos, Felicity Kempson, Maria Helena Thomaz Maia, Andrea Luciana Soares da Silva, André Luiz Teles e Silva, Gurpreet S. Ghattaoraya, Ana Alfirevic, Andrew R. Jones, Derek Middleton	Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations.	Nucleic Acids Res.	2015	DBLP DOI BibTeX RDF
21	James Robinson, Jason A. Halliwell, James D. Hayhurst, Paul Flicek, Peter Parham, Steven G. E. Marsh	The IPD and IMGT/HLA database: allele variant databases.	Nucleic Acids Res.	2015	DBLP DOI BibTeX RDF
21	Thomas O. McDonald, Marek Kimmel	A multitype infinite-allele branching process with applications to cancer evolution.	J. Appl. Probab.	2015	DBLP DOI BibTeX RDF
21	Matti Pirinen, Tuuli Lappalainen, Noah A. Zaitlen, Emmanouil T. Dermitzakis, Peter Donnelly, Mark I. McCarthy, Manuel A. Rivas	Assessing allele-specific expression across multiple tissues from RNA-seq read data.	Bioinform.	2015	DBLP DOI BibTeX RDF
21	Swneke D. Bailey, Carl Virtanen, Benjamin Haibe-Kains, Mathieu Lupien	ABC: a tool to identify SNVs causing allele-specific transcription factor binding from ChIP-Seq experiments.	Bioinform.	2015	DBLP DOI BibTeX RDF
21	Chris T. Harvey, Gregory A. Moyerbrailean, Gordon O. Davis, Xiaoquan Wen, Francesca Luca, Roger Pique-Regi	QuASAR: quantitative allele-specific analysis of reads.	Bioinform.	2015	DBLP DOI BibTeX RDF
21	Ashfaqur Rahman, Andrew D. Hellicar, Daniel V. Smith, John M. Henshall	Allele frequency calibration for SNP based genotyping of DNA pools: A regression based local-global error fusion method.	Comput. Biol. Medicine	2015	DBLP DOI BibTeX RDF
21	Guoting Chen, Ning Han, Guofeng Li, Xin Li, Guang Li, Yangzhou Liu, Wei Wu, Yong Wang, Yanxi Chen, Guixin Sun, Zengchun Li, Qinchuan Li	Prediction of feature genes in trauma patients with the TNF rs1800629 A allele using support vector machine.	Comput. Biol. Medicine	2015	DBLP DOI BibTeX RDF
21	Zhongyang Zhang, Ke Hao	SAAS-CNV: A Joint Segmentation Approach on Aggregated and Allele Specific Signals for the Identification of Somatic Copy Number Alterations with Next-Generation Sequencing Data.	PLoS Comput. Biol.	2015	DBLP DOI BibTeX RDF
21	Noa Slater, Yoram Louzoun, Loren Gragert, Martin Maiers, Ansu Chatterjee, Mark Albrecht	Power Laws for Heavy-Tailed Distributions: Modeling Allele and Haplotype Diversity for the National Marrow Donor Program.	PLoS Comput. Biol.	2015	DBLP DOI BibTeX RDF
21	Andrea Marinoni, Ettore Rizzo, Ivan Limongelli, Paolo Gamba, Riccardo Bellazzi	A kinetic model-based algorithm to classify NGS short reads by their allele origin.	J. Biomed. Informatics	2015	DBLP DOI BibTeX RDF
21	Yadu Gautam, Carl Lee, Chin-I Cheng, Carl D. Langefeld	An Evaluation of the MiDCoP Method for Imputing Allele Frequency in Genome Wide Association Studies.	Software Engineering, Artificial Intelligence, Networking and Parallel/Distributed Computing	2015	DBLP DOI BibTeX RDF