Search results for "BAliBASE"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
60	Vincenzo Cutello, D. Lee, Giuseppe Nicosia, Mario Pavone, I. Prizzi	Aligning Multiple Protein Sequences by Hybrid Clonal Selection Algorithm with Insert-Remove-Gaps and BlockShuffling Operators.	ICARIS	2006	DBLP DOI BibTeX RDF	hypermutation operator, bioinformatics, multiple sequence alignment, immune algorithms, clonal selection algorithms, protein sequences
56	Pasut Seeluangsawat, Prabhas Chongstitvatana	A multiple objective evolutionary algorithm for multiple sequence alignment.	GECCO	2005	DBLP DOI BibTeX RDF	BAliBASE, Clustal X, multiple objective evolutionary algorithm, multiple sequence alignment
39	Jacek Blazewicz, Piotr Formanowicz, Pawel Wojciechowski	Some remarks on evaluating the quality of the multiple sequence alignment based on the BAliBASE benchmark.	Int. J. Appl. Math. Comput. Sci.	2009	DBLP DOI BibTeX RDF
39	Anne Bahr, Julie Dawn Thompson, Jean-Claude Thierry, Olivier Poch	BAliBASE (Benchmark Alignment dataBASE): enhancements for repeats, transmembrane sequences and circular permutations.	Nucleic Acids Res.	2001	DBLP DOI BibTeX RDF
39	Kevin Karplus, Birong Hu	Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test set.	Bioinform.	2001	DBLP DOI BibTeX RDF
39	Julie Dawn Thompson, Frédéric Plewniak, Olivier Poch	BAliBASE: a benchmark alignment database for the evaluation of multiple alignment programs.	Bioinform.	1999	DBLP DOI BibTeX RDF
20	Javid Taheri, Albert Y. Zomaya, Bing Bing Zhou	RBT-I: A novel approach for solving the Multiple Sequence Alignment problem.	AICCSA	2008	DBLP DOI BibTeX RDF
20	Yue Lu, Sing-Hoi Sze	Multiple Sequence Alignment Based on Profile Alignment of Intermediate Sequences.	RECOMB	2007	DBLP DOI BibTeX RDF
20	Ahmet Sacan, Ismail Hakki Toroslu	Amino Acid Substitution Matrices Based on 4-Body Delaunay Contact Profiles.	BIBE	2007	DBLP DOI BibTeX RDF
20	Farhana Naznin, Morikazu Nakamura, Takeo Okazaki, Yumiko Nakajima	An evolutionary progressive multiple sequence alignment.	IEEE Congress on Evolutionary Computation	2007	DBLP DOI BibTeX RDF
20	Feng Yue, Jijun Tang	A Divide-and-Conquer Implementation of Three Sequence Alignment and Ancestor Inference.	BIBM	2007	DBLP DOI BibTeX RDF
20	Jean-Michel Richer, Vincent Derrien, Jin-Kao Hao	A New Dynamic Programming Algorithm for Multiple Sequence Alignment.	COCOA	2007	DBLP DOI BibTeX RDF	dynamic programming, multiple alignment
20	Abdesslem Layeb, Abdel Hakim Deneche	Multiple Sequence Alignment by Immune Artificial System.	AICCSA	2007	DBLP DOI BibTeX RDF
20	Heitor S. Lopes, Guilherme Luiz Moritz	A Graph-Based Genetic Algorithm for the Multiple Sequence Alignment Problem.	ICAISC	2006	DBLP DOI BibTeX RDF
20	Alexandre H. L. Porto, Valmir Carneiro Barbosa	A Methodology for Determining Amino-Acid Substitution Matrices from Set Covers.	EvoWorkshops	2006	DBLP DOI BibTeX RDF	Substitution matrix, Residue set cover, Sequence alignment
20	Alexandre H. L. Porto, Valmir Carneiro Barbosa	Multiple Sequence Alignment Based on Set Covers.	EvoWorkshops	2006	DBLP DOI BibTeX RDF	Set covers, Multiple sequence alignment
20	Hongwei Huo, Vojislav Stojkovic	Two-Phase Quantum Based Evolutionary Algorithm for Multiple Sequence Alignment.	CIS	2006	DBLP DOI BibTeX RDF
20	Yanping Lv, Shaozi Li, Changle Zhou, Wenzhong Guo, Zhengming Xu	Improved Genetic Algorithm for Multiple Sequence Alignment Using Segment Profiles (GASP).	ADMA	2006	DBLP DOI BibTeX RDF
20	Yao-ming Huang, Christopher Bystroff	Improved pairwise alignment of proteins in the Twilight Zone using local structure predictions.	CSB Workshops	2005	DBLP DOI BibTeX RDF
20	Hongwei Huo, Hua Ming	Simulated Annealing with Injecting Star-Alignment for Multiple Sequence Alignments.	CIS (1)	2005	DBLP DOI BibTeX RDF
20	Lifang Liu 0001, Hongwei Huo, Bao-Shu Wang	HGA-COFFEE : Aligning Multiple Sequences by Hybrid Genetic Algorithm.	ADMA	2005	DBLP DOI BibTeX RDF
20	Hong-Wei Ge, Yanchun Liang 0001	A Hidden Markov Model and Immune Particle Swarm Optimization-Based Algorithm for Multiple Sequence Alignment.	Australian Conference on Artificial Intelligence	2005	DBLP DOI BibTeX RDF
20	Robert C. Edgar	MUSCLE: Multiple Sequence Alignment with Improved Accuracy and Speed.	CSB	2004	DBLP DOI BibTeX RDF