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Searching for ClustalW with no syntactic query expansion in all metadata.

Publication years (Num. hits)
1998-2005 (15) 2006-2008 (18) 2009-2018 (9)
Publication types (Num. hits)
article(6) inproceedings(36)
Venues (Conferences, Journals, ...)
IPDPS(4) Bioinform.(2) ARC(1) ASAP(1) BIBE(1) BIBM(1) BIOCOMP(1) BSB(1) CCECE(1) CISIS(1) Comput. Biol. Chem.(1) CSB(1) CSB Workshops(1) DEXA Workshops(1) EIT(1) Euro-Par(1) More (+10 of total 38)
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The graphs summarize 23 occurrences of 16 keywords

Results
Found 42 publication records. Showing 42 according to the selection in the facets
Hits ? Authors Title Venue Year Link Author keywords
214Kridsadakorn Chaichoompu, Surin Kittitornkun, Sissades Tongsima MT-ClustalW: multithreading multiple sequence alignment. Search on Bibsonomy IPDPS The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
141Siamak Rezaei, Md. Maruf Monwar Divide-and-Conquer Algorithm for Clustalw-MPI. Search on Bibsonomy CCECE The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
91Yongchao Liu, Bertil Schmidt, Douglas L. Maskell MSA-CUDA: Multiple Sequence Alignment on Graphics Processing Units with CUDA. Search on Bibsonomy ASAP The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
81Yan Lin Aung, Douglas L. Maskell, Timothy F. Oliver, Bertil Schmidt, William Bong C-Based Design Methodology for FPGA Implementation of ClustalW MSA. Search on Bibsonomy PRIB The full citation details ... 2007 DBLP  DOI  BibTeX  RDF ClustalW, FPGA, multiple sequence alignment, sequence analysis
73Kevin Liu, Serita M. Nelesen, Sindhu Raghavan, C. Randal Linder, Tandy J. Warnow Barking Up The Wrong Treelength: The Impact of Gap Penalty on Alignment and Tree Accuracy. Search on Bibsonomy IEEE ACM Trans. Comput. Biol. Bioinform. The full citation details ... 2009 DBLP  DOI  BibTeX  RDF Markov processes, Biology and genetics
68Weiguo Liu, Bertil Schmidt, Gerrit Voss, Wolfgang Müller-Wittig GPU-ClustalW: Using Graphics Hardware to Accelerate Multiple Sequence Alignment. Search on Bibsonomy HiPC The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
64Kuo-Bin Li ClustalW-MPI: ClustalW analysis using distributed and parallel computing. Search on Bibsonomy Bioinform. The full citation details ... 2003 DBLP  DOI  BibTeX  RDF
55Yongchao Liu, Bertil Schmidt, Douglas L. Maskell Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA. Search on Bibsonomy IPDPS The full citation details ... 2009 DBLP  DOI  BibTeX  RDF
55Carlos Raimundo Erig Lima, Heitor S. Lopes, Maiko R. Moroz, Ramon M. Menezes Multiple Sequence Alignment Using Reconfigurable Computing. Search on Bibsonomy ARC The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
50Hyon Chang Kim, Yong Beom Seo, Ji Hwan Song, Dong Soon Choi, Churl K. Min, Han Jip Kim Massive Multiple Sequence Alignment of 16S Bacterial Ribosomal RNAs Using ClustalW-Message Passing Interface (MPI) Based on Beowulf Linux System. Search on Bibsonomy CSB Workshops The full citation details ... 2005 DBLP  DOI  BibTeX  RDF ClustalWMPI, 16S ribosomal RNA, ribosomal antibiotics, multiple sequence alignment
36Ankit Agrawal 0001, S. K. Khaitan A new heuristic for multiple sequence alignment. Search on Bibsonomy EIT The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
36Guangming Tan, Liu Peng, Shengzhong Feng, Ninghui Sun Load Balancing and Parallel Multiple Sequence Alignment with Tree Accumulation. Search on Bibsonomy Euro-Par The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
36Yiming Li 0005, Cheng-Kai Chen Parallelization of Multiple Genome Alignment. Search on Bibsonomy HPCC The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
36Jiancong Luo, Ishfaq Ahmad, Munib Ahmed, Raymond A. Paul Parallel Multiple Sequence Alignment with Dynamic Scheduling. Search on Bibsonomy ITCC (1) The full citation details ... 2005 DBLP  DOI  BibTeX  RDF task tree, progressive alignment, parallel computing, dynamic scheduling, multiple sequence alignment
32Sangwu Lim, Taeseon Yoon Genomic Comparison of Four Metapneumovirus Strains Using Decision Tree, Apriori Algorithm, ClustalW, and Phylogenetic Reconstruction. Search on Bibsonomy ICBRA The full citation details ... 2018 DBLP  DOI  BibTeX  RDF
32Che-Lun Hung, Yu-Shiang Lin, Chun-Yuan Lin, Yeh-Ching Chung, Yi-Fang Chung CUDA ClustalW: An efficient parallel algorithm for progressive multiple sequence alignment on Multi-GPUs. Search on Bibsonomy Comput. Biol. Chem. The full citation details ... 2015 DBLP  DOI  BibTeX  RDF
32Atabak Mahram, Martin C. Herbordt FMSA: FPGA-Accelerated ClustalW-Based Multiple Sequence Alignment through Pipelined Prefiltering. Search on Bibsonomy FCCM The full citation details ... 2012 DBLP  DOI  BibTeX  RDF
32Vipin Sachdeva, Michael Kistler, David A. Bader Evaluating Cell/B.E software cache for ClustalW. Search on Bibsonomy ISCAS The full citation details ... 2010 DBLP  DOI  BibTeX  RDF
32Ryan Potter Constructing More Accurate Phylogenetic Trees for Highly Divergent Sequences using ClustalW. Search on Bibsonomy ICDM (Posters and Workshops) The full citation details ... 2008 DBLP  BibTeX  RDF
32Avinash Shankaranarayanan, Christine Amaldas A Computational Framework for Performance Optimization of Bioinformatics ClustalW. Search on Bibsonomy BIOCOMP The full citation details ... 2008 DBLP  BibTeX  RDF
32Zhihua Du, Feng Lin pNJTree: A parallel program for reconstruction of neighbor-joining tree and its application in ClustalW. Search on Bibsonomy Parallel Comput. The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
32Timothy F. Oliver, Bertil Schmidt, Darran Nathan, Ralf Clemens, Douglas L. Maskell Using reconfigurable hardware to accelerate multiple sequence alignment with ClustalW. Search on Bibsonomy Bioinform. The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
32Davinder K. Kohli, Anand K. Bachhawat CLOURE: Clustal Output Reformatter, a program for reformatting ClustalX/ClustalW outputs for SNP analysis and molecular systematics. Search on Bibsonomy Nucleic Acids Res. The full citation details ... 2003 DBLP  DOI  BibTeX  RDF
31Sebastián Isaza, Friman Sánchez, Georgi Gaydadjiev, Alex Ramírez, Mateo Valero Scalability Analysis of Progressive Alignment on a Multicore. Search on Bibsonomy CISIS The full citation details ... 2010 DBLP  DOI  BibTeX  RDF clustalw, bioinformatics, multicore, multiple sequence alignment, cell
31Çaglar Yilmaz, Mustafa Gök An Optimized System for Multiple Sequence Alignment. Search on Bibsonomy ReConFig The full citation details ... 2009 DBLP  DOI  BibTeX  RDF ClustalW, Hardware, Multiple Sequence Alignment
18Sebastián Isaza, Friman Sánchez, Georgi Gaydadjiev, Alex Ramírez, Mateo Valero Preliminary Analysis of the Cell BE Processor Limitations for Sequence Alignment Applications. Search on Bibsonomy SAMOS The full citation details ... 2008 DBLP  DOI  BibTeX  RDF
18Xiaoyong Fang, Zhenghua Wang, Zhigang Luo, Bo Yuan, Fan Ding The detection and assessment of possible RNA secondary structure using multiple sequence alignment. Search on Bibsonomy SAC The full citation details ... 2007 DBLP  DOI  BibTeX  RDF multiple sequence alignment, RNA secondary structure, non-coding RNA
18Vipin Sachdeva, Michael Kistler, William Evan Speight, Tzy-Hwa Kathy Tzeng Exploring the Viability of the Cell Broadband Engine for Bioinformatics Applications. Search on Bibsonomy IPDPS The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
18Feng Yue, Jijun Tang A Divide-and-Conquer Implementation of Three Sequence Alignment and Ancestor Inference. Search on Bibsonomy BIBM The full citation details ... 2007 DBLP  DOI  BibTeX  RDF
18Vincenzo Cutello, D. Lee, Giuseppe Nicosia, Mario Pavone, I. Prizzi Aligning Multiple Protein Sequences by Hybrid Clonal Selection Algorithm with Insert-Remove-Gaps and BlockShuffling Operators. Search on Bibsonomy ICARIS The full citation details ... 2006 DBLP  DOI  BibTeX  RDF hypermutation operator, bioinformatics, multiple sequence alignment, immune algorithms, clonal selection algorithms, protein sequences
18Xi Deng, Eric Li, Jiulong Shan, Wenguang Chen Parallel implementation and performance characterization of MUSCLE. Search on Bibsonomy IPDPS The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
18Hongwei Huo, Vojislav Stojkovic, Zhiwei Xiao A Maximum Weighted Path Approach to Multiple Alignments for DNA Sequences. Search on Bibsonomy ICNC (2) The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
18Vipin Sachdeva, Michael Kistler, Evan Speight Poster reception - Pairwise alignments on the cell processor. Search on Bibsonomy SC The full citation details ... 2006 DBLP  DOI  BibTeX  RDF
18Erik Pitzer Parallel Progressive Multiple Sequence Alignment. Search on Bibsonomy EUROCAST The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
18Markus Bauer 0001, Gunnar W. Klau, Knut Reinert Multiple Structural RNA Alignment with Lagrangian Relaxation. Search on Bibsonomy WABI The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
18Walter L. Ruzzo Searching for Non-coding RNA. Search on Bibsonomy BSB The full citation details ... 2005 DBLP  DOI  BibTeX  RDF
18René Thomsen, Wouter Boomsma Multiple Sequence Alignment Using SAGA: Investigating the Effects of Operator Scheduling, Population Seeding, and Crossover Operators. Search on Bibsonomy EvoWorkshops The full citation details ... 2004 DBLP  DOI  BibTeX  RDF
18Robert C. Edgar MUSCLE: Multiple Sequence Alignment with Improved Accuracy and Speed. Search on Bibsonomy CSB The full citation details ... 2004 DBLP  DOI  BibTeX  RDF
18Mathieu Blanchette, Samson Kwong, Martin Tompa An Empirical Comparison of Tools for Phylogenetic Footprinting. Search on Bibsonomy BIBE The full citation details ... 2003 DBLP  DOI  BibTeX  RDF
18Gareth Hannaford, Carsten Maple Determining Candidate Binding Site Locations Using Conserved Features. Search on Bibsonomy IV The full citation details ... 2003 DBLP  DOI  BibTeX  RDF
18Saumil Mehta, Deendayal Dinakarpandian ConsDiff: Identification of Conserved Differences between Sets of Amino Acid Sequences. Search on Bibsonomy DEXA Workshops The full citation details ... 2003 DBLP  DOI  BibTeX  RDF
18L. A. Anbarasu, P. Narayanasamy, V. Sundararajan Multiple Sequence Alignment Using Parallel Genetic Algorithms. Search on Bibsonomy SEAL The full citation details ... 1998 DBLP  DOI  BibTeX  RDF
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