Search results for "EMBL"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
57	O. V. Kel, A. G. Romachenko, Alexander E. Kel, Andrey N. Naumochkin, Nikolay A. Kolchanov	Data representation in the TRRD-a database of transcription regulatory regions of the eukaryotic genomes.	HICSS (5)	1995	DBLP DOI BibTeX RDF	TRRD, transcription regulatory regions, eukaryotic genomes, TRRD database, structural functional organization, protein factors, transcription signals, eukaryotic genome, EMBL, EPD, TFD, TRANSFAC, human glycoprotein hormone gene, database, data structures, database management systems, medical information systems, genetics, biology computing, data representation, transcription regulation
53	Matthew Thakur, Alex Bateman, Cath Brooksbank, Mallory Ann Freeberg, Melissa Harrison, Matthew Hartley, Thomas M. Keane, Gerard J. Kleywegt, Andrew Leach, Maria Levchenko, Sarah L. Morgan, Ellen M. McDonagh, Sandra E. Orchard, Irene Papatheodorou, Sameer Velankar, Juan Antonio Vizcaíno, Rick Witham, Barbara Zdrazil, Johanna R. McEntyre	EMBL's European Bioinformatics Institute (EMBL-EBI) in 2022.	Nucleic Acids Res.	2023	DBLP DOI BibTeX RDF
27	Montserrat González Ferreiro, Steven J. Newhouse	Data protection record of processing activities and privacy notice generator toolkit by EMBL's European Bioinformatics Institute.	F1000Research	2022	DBLP DOI BibTeX RDF
27	Montserrat González Ferreiro, Steven J. Newhouse	IT Service management system for EMBL's European Bioinformatics Institute's IT department.	F1000Research	2022	DBLP DOI BibTeX RDF
27	Fábio Madeira, Matt Pearce, Adrian R. N. Tivey, Prasad Basutkar, Joon Lee, Ossama Edbali, Nandana Madhusoodanan, Anton Kolesnikov, Rodrigo Lopez	Search and sequence analysis tools services from EMBL-EBI in 2022.	Nucleic Acids Res.	2022	DBLP DOI BibTeX RDF
27	Gaia Cantelli, Alex Bateman, Cath Brooksbank, Anton I. Petrov, Rahuman S. Malik-Sheriff, Michele Ide-Smith, Henning Hermjakob, Paul Flicek, Rolf Apweiler, Ewan Birney, Johanna R. McEntyre	The European Bioinformatics Institute (EMBL-EBI) in 2021.	Nucleic Acids Res.	2022	DBLP DOI BibTeX RDF
27	Fábio Madeira, Young Mi Park, Joon Lee, Nicola Buso, Tamer Gur, Nandana Madhusoodanan, Prasad Basutkar, Adrian R. N. Tivey, Simon C. Potter, Robert D. Finn, Rodrigo Lopez	The EMBL-EBI search and sequence analysis tools APIs in 2019.	Nucleic Acids Res.	2019	DBLP DOI BibTeX RDF
27	Szymon Chojnacki, Andrew Peter Cowley, Joon Lee, Anna Foix, Rodrigo Lopez	Programmatic access to bioinformatics tools from EMBL-EBI update: 2017.	Nucleic Acids Res.	2017	DBLP DOI BibTeX RDF
27	Andrew J. Page, Sascha Steinbiss, Ben Taylor, Torsten Seemann, Jacqueline A. Keane	GFF3toEMBL: Preparing annotated assemblies for submission to EMBL.	J. Open Source Softw.	2016	DBLP DOI BibTeX RDF
27	Thomas Liener, Tony Burdett, Simon Jupp	Updates from the EMBL-EBI RDF platform.	SWAT4LS	2016	DBLP BibTeX RDF
27	Olga Vrousgou, Tony Burdett, Helen E. Parkinson, Simon Jupp	Biomedical Ontology Evolution in the EMBL-EBI Ontology Lookup Service.	EDBT/ICDT Workshops	2016	DBLP BibTeX RDF
27	Silvano Squizzato, Young Mi Park, Nicola Buso, Tamer Gur, Andrew Peter Cowley, Weizhong Li 0001, Mahmut Uludag, Sangya Pundir, Jennifer A. Cham, Hamish McWilliam, Rodrigo Lopez	The EBI Search engine: providing search and retrieval functionality for biological data from EMBL-EBI.	Nucleic Acids Res.	2015	DBLP DOI BibTeX RDF
27	Weizhong Li 0001, Andrew Peter Cowley, Mahmut Uludag, Tamer Gur, Hamish McWilliam, Silvano Squizzato, Young Mi Park, Nicola Buso, Rodrigo Lopez	The EMBL-EBI bioinformatics web and programmatic tools framework.	Nucleic Acids Res.	2015	DBLP DOI BibTeX RDF
27	Simon Jupp, Tony Burdett, Catherine Leroy, Helen E. Parkinson	A new Ontology Lookup Service at EMBL-EBI.	SWAT4LS	2015	DBLP BibTeX RDF
27	Hamish McWilliam, Weizhong Li 0001, Mahmut Uludag, Silvano Squizzato, Young Mi Park, Nicola Buso, Andrew Peter Cowley, Rodrigo Lopez	Analysis Tool Web Services from the EMBL-EBI.	Nucleic Acids Res.	2013	DBLP DOI BibTeX RDF
27	Mickael Goujon, Hamish McWilliam, Weizhong Li 0001, Franck Valentin, Silvano Squizzato, Juri Paern, Rodrigo Lopez	A new bioinformatics analysis tools framework at EMBL-EBI.	Nucleic Acids Res.	2010	DBLP DOI BibTeX RDF
27	Wendy A. Warr	ChEMBL. An interview with John Overington, team leader, chemogenomics at the European Bioinformatics Institute Outstation of the European Molecular Biology Laboratory (EMBL-EBI).	J. Comput. Aided Mol. Des.	2009	DBLP DOI BibTeX RDF
27	Guy Cochrane, Ruth Akhtar, Philippe Aldebert, Nicola Althorpe, Alastair Baldwin, Kirsty Bates, Sumit Bhattacharyya, James K. Bonfield, Lawrence Bower, Paul Browne, Matias Castro, Tony Cox 0001, Fehmi Demiralp, Ruth Y. Eberhardt, Nadeem Faruque, Gemma Hoad, Mikyung Jang, Tamara Kulikova, Alberto Labarga, Rasko Leinonen, Steven Leonard, Quan Lin, Rodrigo Lopez, Dariusz Lorenc, Hamish McWilliam, Gaurab Mukherjee, Francesco Nardone, Sheila Plaister, Stephen Robinson, Siamak Sobhany, Robert Vaughan 0001, Dan Wu, Weimin Zhu, Rolf Apweiler, Tim J. P. Hubbard, Ewan Birney	Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
27	Tamara Kulikova, Ruth Akhtar, Philippe Aldebert, Nicola Althorpe, Mikael Andersson, Alastair Baldwin, Kirsty Bates, Sumit Bhattacharyya, Lawrence Bower, Paul Browne, Matias Castro, Guy Cochrane, Karyn Duggan, Ruth Y. Eberhardt, Nadeem Faruque, Gemma Hoad, Carola Kanz, Charles Lee, Rasko Leinonen, Quan Lin, Vincent Lombard, Rodrigo Lopez, Dariusz Lorenc, Hamish McWilliam, Gaurab Mukherjee, Francesco Nardone, Maria Pilar Garcia Pastor, Sheila Plaister, Siamak Sobhany, Peter Stoehr, Robert Vaughan 0001, Dan Wu, Weimin Zhu, Rolf Apweiler	EMBL Nucleotide Sequence Database in 2006.	Nucleic Acids Res.	2007	DBLP DOI BibTeX RDF
27	Guy Cochrane, Philippe Aldebert, Nicola Althorpe, Mikael Andersson, Wendy Baker, Alastair Baldwin, Kirsty Bates, Sumit Bhattacharyya, Paul Browne, Alexandra van den Broek, Matias Castro, Karyn Duggan, Ruth Y. Eberhardt, Nadeem Faruque, John Gamble, Carola Kanz, Tamara Kulikova, Charles Lee, Rasko Leinonen, Quan Lin, Vincent Lombard, Rodrigo Lopez, Michelle McHale, Hamish McWilliam, Gaurab Mukherjee, Francesco Nardone, Maria Pilar Garcia Pastor, Siamak Sobhany, Peter Stoehr, Katerina Tzouvara, Robert Vaughan 0001, Dan Wu, Weimin Zhu, Rolf Apweiler	EMBL Nucleotide Sequence Database: developments in 2005.	Nucleic Acids Res.	2006	DBLP DOI BibTeX RDF
27	Carola Kanz, Philippe Aldebert, Nicola Althorpe, Wendy Baker, Alastair Baldwin, Kirsty Bates, Paul Browne, Alexandra van den Broek, Matias Castro, Guy Cochrane, Karyn Duggan, Ruth Y. Eberhardt, Nadeem Faruque, John Gamble, Federico Garcia Diez, Nicola Harte, Tamara Kulikova, Quan Lin, Vincent Lombard, Rodrigo Lopez, Renato Mancuso 0002, Michelle McHale, Francesco Nardone, Ville Silventoinen, Siamak Sobhany, Peter Stoehr, Mary Ann Tuli, Katerina Tzouvara, Robert Vaughan 0001, Dan Wu, Weimin Zhu, Rolf Apweiler	The EMBL Nucleotide Sequence Database.	Nucleic Acids Res.	2005	DBLP DOI BibTeX RDF
27	Tamara Kulikova, Philippe Aldebert, Nicola Althorpe, Wendy Baker, Kirsty Bates, Paul Browne, Alexandra van den Broek, Guy Cochrane, Karyn Duggan, Ruth Y. Eberhardt, Nadeem Faruque, Maria Garcia-Pastor, Nicola Harte, Carola Kanz, Rasko Leinonen, Quan Lin, Vincent Lombard, Rodrigo Lopez, Renato Mancuso 0002, Michelle McHale, Francesco Nardone, Ville Silventoinen, Peter Stoehr, Guenter Stoesser, Mary Ann Tuli, Katerina Tzouvara, Robert Vaughan 0001, Dan Wu, Weimin Zhu, Rolf Apweiler	The EMBL Nucleotide Sequence Database.	Nucleic Acids Res.	2004	DBLP DOI BibTeX RDF
27	Guenter Stoesser, Wendy Baker, Alexandra van den Broek, Maria Garcia-Pastor, Carola Kanz, Tamara Kulikova, Rasko Leinonen, Quan Lin, Vincent Lombard, Rodrigo Lopez, Renato Mancuso 0002, Francesco Nardone, Peter Stoehr, Mary Ann Tuli, Katerina Tzouvara, Robert Vaughan 0001	The EMBL Nucleotide Sequence Database: major new developments.	Nucleic Acids Res.	2003	DBLP DOI BibTeX RDF
27	Rasko Leinonen, Francesco Nardone, Olalekan Oyewole, Nicole Redaschi, Peter Stoehr	The EMBL sequence version archive.	Bioinform.	2003	DBLP DOI BibTeX RDF
27	Guenter Stoesser, Wendy Baker, Alexandra van den Broek, Evelyn Camon, Maria Garcia-Pastor, Carola Kanz, Tamara Kulikova, Rasko Leinonen, Quan Lin, Vincent Lombard, Rodrigo Lopez, Nicole Redaschi, Peter Stoehr, Mary Ann Tuli, Katerina Tzouvara, Robert Vaughan 0001	The EMBL Nucleotide Sequence Database.	Nucleic Acids Res.	2002	DBLP DOI BibTeX RDF
27	Vincent Lombard, E. B. Camon, Helen E. Parkinson, Pascal Hingamp, Guenter Stoesser, Nicole Redaschi	EMBL-Align: a new public nucleotide and amino acid multiple sequence alignment database.	Bioinform.	2002	DBLP DOI BibTeX RDF
27	Lichun Wang, Jean-Jack M. Riethoven, Alan J. Robinson	XEMBL: distributing EMBL data in XML format.	Bioinform.	2002	DBLP DOI BibTeX RDF
27	T. Kunisawa	Functional role of bacteriophage transfer RNAs: codon usage analysis of genomic sequences stored in the GENBANK/EMBL/DDBJ databases.	Data Sci. J.	2002	DBLP DOI BibTeX RDF
27	Guenter Stoesser, Wendy Baker, Alexandra van den Broek, Evelyn Camon, Maria Garcia-Pastor, Carola Kanz, Tamara Kulikova, Vincent Lombard, Rodrigo Lopez, Helen E. Parkinson, Nicole Redaschi, Peter Sterk, Peter Stoehr, Mary Ann Tuli	The EMBL nucleotide sequence database.	Nucleic Acids Res.	2001	DBLP DOI BibTeX RDF
27	Wendy Baker, Alexandra van den Broek, Evelyn Camon, Pascal Hingamp, Peter Sterk, Guenter Stoesser, Mary Ann Tuli	The EMBL Nucleotide Sequence Database.	Nucleic Acids Res.	2000	DBLP DOI BibTeX RDF
27	Guenter Stoesser, Mary Ann Tuli, Rodrigo Lopez, Peter Sterk	The EMBL Nucleotide Sequence Database.	Nucleic Acids Res.	1999	DBLP DOI BibTeX RDF
27	Crispin J. Miller, J. Gurd, Andy Brass	A RAPID algorithm for sequence database comparisons: application to the identification of vector contamination in the EMBL databases.	Bioinform.	1999	DBLP DOI BibTeX RDF
27	Guenter Stoesser, Mary Ann Moseley, Joanne Sleep, Michael McGowran, Maria Garcia-Pastor, Peter Sterk	The EMBL nucleotide sequence database.	Nucleic Acids Res.	1998	DBLP DOI BibTeX RDF
27	Matthew R. Pocock, Tim J. P. Hubbard, Ewan Birney	SPEM: a parser for EMBL style flat file database entries.	Bioinform.	1998	DBLP DOI BibTeX RDF
27	Merwan Abd el Kader, Tiiu Ojasoo, Jean-François Miquel, Yoshiko Okubo, Jean-Christophe Doré	Hierarchical author networks: An analysis of European molecular biology laboratory (EMBL) publications.	Scientometrics	1998	DBLP DOI BibTeX RDF
27	Mary Ann Tuli, Peter Sterk	The EMBL Nucleotide Sequence Database at the European Bioinformatics Institute (EBI): Sequence Similarity Searching & Database query/retrieval.	German Conference on Bioinformatics	1998	DBLP BibTeX RDF
27	Peter Sterk, Mary Ann Tuli	The EMBL Nucleotide Sequence Database at the European Bioinformatics Institute (EBI): Data Acquisition.	German Conference on Bioinformatics	1998	DBLP BibTeX RDF
27	Philip Lijnzaad, Katarzyna Kruszewska, Nicole Redaschi, Patricia Rodriguez-Tomé	A CORBA server for the EMBL Nucleotide Sequence Database: presentation of a first full implementation (EMCORBA v2).	German Conference on Bioinformatics	1998	DBLP BibTeX RDF
27	Guenter Stoesser, Peter Sterk, Mary Ann Tuli, Peter Stoehr, Graham Cameron	The EMBL Nucleotide Sequence Database.	Nucleic Acids Res.	1997	DBLP DOI BibTeX RDF
27	Benny Shomer	Seqalert - a daily sequence alertness server for the EMBL and SWISSPROT databases.	Comput. Appl. Biosci.	1997	DBLP DOI BibTeX RDF
27	Benny Shomer	EMBL sequence submission system--an object-oriented approach to developing interactive data collection systems through the WWW.	Comput. Appl. Biosci.	1997	DBLP DOI BibTeX RDF
27	Catherine M. Rice, Rainer Fuchs, Desmond G. Higgins, Peter Stoehr, Graham Cameron	The EMBL data library.	Nucleic Acids Res.	1993	DBLP DOI BibTeX RDF
27	Rainer Fuchs, Peter Stoehr	EMBL-search: a CD-ROM based database query system.	Comput. Appl. Biosci.	1993	DBLP DOI BibTeX RDF
27	Rainer Fuchs	Free molecular biological software available from the EMBL file server.	Comput. Appl. Biosci.	1990	DBLP DOI BibTeX RDF
27	G. W. Williams, G. P. Gibbs	Automatic updating of the EMBL database via EMBNet.	Comput. Appl. Biosci.	1990	DBLP DOI BibTeX RDF
27	G. H. Hamm, G. N. Cameron	The EMBL data library.	Nucleic Acids Res.	1986	DBLP DOI BibTeX RDF
27	R. Harr, P. Fallman, M. Haggstrom, L. Wahlstrom, P. Gustafsson	GENEUS, a computer system for DNA and protein sequence analysis containing an information retrieval system for the EMBL data library.	Nucleic Acids Res.	1986	DBLP DOI BibTeX RDF
21	Grégory Nuel	Counting Patterns in Degenerated Sequences.	PRIB	2009	DBLP DOI BibTeX RDF	Expectation-Maximization algorithmn, Markov chain embedding, Deterministic Finite state Automaton, Forward-Backward algorithm
21	Liqun Liang, Shaowu Li, Yumei Chang, Yong Li, Xiaowen Sun, Qingquan Lei	Differentially Gene Expression in the Brain of Common Carp ( Cyprinus carpio ) Response to Cold Acclimation.	CCTA	2007	DBLP DOI BibTeX RDF	cold tolerance, suppression subtractive hybridization (SSH), real-time PCR, Cyprinus carpio
21	Yang Song, Sourav S. Bhowmick, C. Forbes Dewey Jr.	BioDIFF: An Effective Fast Change Detection Algorithm for Biological Annotations.	DASFAA	2007	DBLP DOI BibTeX RDF
21	Anne-Claude Gavin	Global Interaction Networks Probed by Mass Spectrometry.	RECOMB	2006	DBLP DOI BibTeX RDF
21	Givon Zirkind	Genetic database optimization: how data inspection and consideration, provides for index compression and record access optimization of genetic databases.	CPR	2006	DBLP DOI BibTeX RDF	aquaculture, record access optimization, optimization, software engineering, database, bioinformatics, genetics, bio-informatics, gene
21	Anne H. H. Ngu, Daniel Rocco, Terence Critchlow, David Buttler	Automatic Discovery and Inferencing of Complex Bioinformatics Web Interfaces.	World Wide Web	2005	DBLP DOI BibTeX RDF
21	Yan Dang 0001, Yulei Zhang 0001, Dongmo Zhang, Liping Zhao 0003	A KNN-Based Learning Method for Biology Species Categorization.	ICNC (1)	2005	DBLP DOI BibTeX RDF
21	Joachim Hammer, Markus Schneider 0001	The GenAlg Project.	SIGMOD Rec.	2004	DBLP DOI BibTeX RDF
21	Amarnath Gupta	Life Science Research and Data Management.	SIGMOD Rec.	2004	DBLP DOI BibTeX RDF
21	Matthias Wilm	Creating the backbone for the virtual cell: cell mapping projects on the run (abstract only).	RECOMB	2001	DBLP DOI BibTeX RDF
21	Hartmut Liefke, Susan B. Davidson	Specifying Updates in Biomedical Databases.	SSDBM	1999	DBLP DOI BibTeX RDF	complex value databases, optimization, object-oriented databases, updates, rewriting, biological databases
21	Jonathan Karges, Otto Ritter, Sándor Suhai	Design and Implementation of a Parallel Pipe.	ACM SIGOPS Oper. Syst. Rev.	1997	DBLP DOI BibTeX RDF
21	Satoru Miyano	Algorithmic Problems Arising from Genome Informatics (Abstract).	ISAAC	1995	DBLP DOI BibTeX RDF