Search results for "Phosphoproteomics"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
36	Jianjiong Gao, Ganesh Kumar Agrawal, Jay J. Thelen, Zoran Obradovic, A. Keith Dunker, Dong Xu 0002	A New Machine Learning Approach for Protein Phosphorylation Site Prediction in Plants.	BICoB	2009	DBLP DOI BibTeX RDF	Protein Phosphorylation, Phosphoproteomics, Arabidopsis, Protein Disorder, SVM, KNN
31	Yuejing Jiang, Xiaoji Cong, Shangwen Jiang, Ying Dong, Lei Zhao, Yi Zang, Minjia Tan, Jia Li 0040	Phosphoproteomics Reveals the AMPK Substrate Network in Response to DNA Damage and Histone Acetylation.	Genom. Proteom. Bioinform.	2022	DBLP DOI BibTeX RDF
31	Michael G. Leeming, Sean O'Callaghan, Luana Licata, Marta Iannuccelli, Prisca Lo Surdo, Elisa Micarelli, Ching-Seng Ang, Shuai Nie, Swati Varshney, Sadia Ameen, Heung-Chin Cheng, Nicholas A. Williamson	Phosphomatics: interactive interrogation of substrate-kinase networks in global phosphoproteomics datasets.	Bioinform.	2021	DBLP DOI BibTeX RDF
31	Jinwei Suo, Heng Zhang, Qi Zhao, Nan Zhang, Yongxue Zhang, Ying Li, Baohua Song, Juanjuan Yu, Jianguo Cao, Tai Wang, Ji Luo, Lihai Guo, Jun Ma, Xumin Zhang, Yimin She, Lianwei Peng, Weimin Ma, Siyi Guo, Shaojun Dai	Na2CO3-responsive Photosynthetic and ROS Scavenging Mechanisms in Chloroplasts of Alkaligrass Revealed by Phosphoproteomics.	Genom. Proteom. Bioinform.	2020	DBLP DOI BibTeX RDF
31	Girolamo Giudice, Evangelia Petsalaki	Proteomics and phosphoproteomics in precision medicine: applications and challenges.	Briefings Bioinform.	2019	DBLP DOI BibTeX RDF
31	Sohrab Saraei, Tomi Suomi, Otto Kauko, Laura L. Elo	Phosphonormalizer: an R package for normalization of MS-based label-free phosphoproteomics.	Bioinform.	2018	DBLP DOI BibTeX RDF
31	Danica Wiredja, Mehmet Koyutürk, Mark R. Chance	The KSEA App: a web-based tool for kinase activity inference from quantitative phosphoproteomics.	Bioinform.	2017	DBLP DOI BibTeX RDF
31	Chia-Lang Hsu, Jiankai Wang, Pei-Chun Lu, Hsuan-Cheng Huang, Hsueh-Fen Juan	DynaPho: a web platform for inferring the dynamics of time-series phosphoproteomics.	Bioinform.	2017	DBLP DOI BibTeX RDF
31	Marcel Mischnik, Francesca Sacco, Jürgen Cox, Hans-Christoph Schneider, Matthias Schäfer, Manfred Hendlich, Daniel Crowther, Matthias Mann 0002, Thomas Klabunde	IKAP: A heuristic framework for inference of kinase activities from Phosphoproteomics data.	Bioinform.	2016	DBLP DOI BibTeX RDF
31	Pengyi Yang, Sean J. Humphrey, David E. James, Yee Hwa Yang, Raja Jothi	Positive-unlabeled ensemble learning for kinase substrate prediction from dynamic phosphoproteomics data.	Bioinform.	2016	DBLP DOI BibTeX RDF
31	Yuta Narushima, Hiroko Kozuka-Hata, Kouhei Tsumoto, Jun-Ichiro Inoue, Masaaki Oyama	Quantitative phosphoproteomics-based molecular network description for high-resolution kinase-substrate interactome analysis.	Bioinform.	2016	DBLP DOI BibTeX RDF
31	Sebastian Vlaic, Robert Altwasser, Peter Kupfer, Carol L. Nilsson, Mark R. Emmett, Anke Meyer-Baese, Reinhard Guthke	Inference of Predictive Phospho-regulatory Networks from LC-MS/MS Phosphoproteomics Data.	BIOINFORMATICS	2016	DBLP DOI BibTeX RDF
31	Pengyi Yang, Xiaofeng Zheng, Vivek Jayaswal, Guang Hu, Jean Yee Hwa Yang, Raja Jothi	Knowledge-Based Analysis for Detecting Key Signaling Events from Time-Series Phosphoproteomics Data.	PLoS Comput. Biol.	2015	DBLP DOI BibTeX RDF
31	Panayotis Vlastaridis, Stephen G. Oliver, Yves Van de Peer, Grigoris D. Amoutzias	The Challenges of Interpreting Phosphoproteomics Data: A Critical View Through the Bioinformatics Lens.	CIBB	2015	DBLP DOI BibTeX RDF
31	Piero Giansanti	Signaling network dynamics investigated by quantitative phosphoproteomics.		2014	RDF
31	Tuobin Wang, Arminja N. Kettenbach, Scott A. Gerber, Chris Bailey-Kellogg	Response to 'Comments on "MMFPh: A Maximal Motif Finder for Phosphoproteomics Datasets"'.	Bioinform.	2012	DBLP DOI BibTeX RDF
31	Tuobin Wang, Arminja N. Kettenbach, Scott A. Gerber, Chris Bailey-Kellogg	MMFPh: a maximal motif finder for phosphoproteomics datasets.	Bioinform.	2012	DBLP DOI BibTeX RDF
31	Zengyou He, Haipeng Gong	Comments on 'MMFPh: A Maximal Motif Finder for Phosphoproteomics Datasets'.	Bioinform.	2012	DBLP DOI BibTeX RDF
31	Marylens Hernandez, Alexander Lachmann, Shan Zhao, Kunhong Xiao, Avi Ma'ayan	Inferring the Sign of Kinase-Substrate Interactions by Combining Quantitative Phosphoproteomics with a Literature-Based Mammalian Kinome Network.	BIBE	2010	DBLP DOI BibTeX RDF	protein phosphorylation, sign inference, systems biology, network analysis
31	Anna M. Ritz, Gregory Shakhnarovich, Arthur R. Salomon, Benjamin J. Raphael	Discovery of phosphorylation motif mixtures in phosphoproteomics data.	Bioinform.	2009	DBLP DOI BibTeX RDF