Search results for "acetylation"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
196	Dang Hung Tran, Tho Hoan Pham, Kenji Satou, Tu Bao Ho	Conditional Random Fields for Predicting and Analyzing Histone Occupancy, Acetylation and Methylation Areas in DNA Sequences.	EvoWorkshops	2006	DBLP DOI BibTeX RDF	Histone proteins, acetylation, conditional random fields, methylation
53	Tho Hoan Pham, Tu Bao Ho, Dang Hung Tran, Kenji Satou	Prediction of Histone Modifications in DNA sequences.	BIBE	2007	DBLP DOI BibTeX RDF
27	Yu Zou, Lulu Guan, Jingwang Tan, Bote Qi, Yunxiang Sun, Fengjuan Huang, Qingwen Zhang	Molecular Insights into the Differential Effects of Acetylation on the Aggregation of Tau Microtubule-Binding Repeats.	J. Chem. Inf. Model.	2024	DBLP DOI BibTeX RDF
27	Wenzheng Bao, Bin Yang	Protein acetylation sites with complex-valued polynomial model.	Frontiers Comput. Sci.	2024	DBLP DOI BibTeX RDF
27	Yixuan Wang, Jingyi Zhang, Yang He, Zhou Pan, Xinyue Zhang, Peijun Liu, Ke Hu	The theranostic value of acetylation gene signatures in obstructive sleep apnea derived by machine learning.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
27	Karen E. Ross, Guolin Zhang, Cuneyt Akcora, Yu Lin, Bin Fang, John M. Koomen, Eric B. Haura, Mark Grimes	Network models of protein phosphorylation, acetylation, and ubiquitination connect metabolic and cell signaling pathways in lung cancer.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
27	Vibhisha Vaghasia, Kumari Snehkant Lata, Saumya Patel, Jayashankar Das	Deciphering the lysine acetylation pattern of leptospiral strains by in silico approach.	Netw. Model. Anal. Health Informatics Bioinform.	2023	DBLP DOI BibTeX RDF
27	Yuejing Jiang, Xiaoji Cong, Shangwen Jiang, Ying Dong, Lei Zhao, Yi Zang, Minjia Tan, Jia Li 0040	Phosphoproteomics Reveals the AMPK Substrate Network in Response to DNA Damage and Histone Acetylation.	Genom. Proteom. Bioinform.	2022	DBLP DOI BibTeX RDF
27	Shaherin Basith, Gwang Lee, Balachandran Manavalan	STALLION: a stacking-based ensemble learning framework for prokaryotic lysine acetylation site prediction.	Briefings Bioinform.	2022	DBLP DOI BibTeX RDF
27	Yuan Li, Saadia Khilji, Yan Z. Mach, Jihong Chen, Qiao Li	Chromatin state distribution of residue-specific histone acetylation in early myoblast differentiation.	J. Big Data	2022	DBLP DOI BibTeX RDF
27	Huiqing Wang, Zhiliang Yan, Dan Liu, Hong Zhao, Jian Zhao 0032	MDC-Kace: A Model for Predicting Lysine Acetylation Sites Based on Modular Densely Connected Convolutional Networks.	IEEE Access	2020	DBLP DOI BibTeX RDF
27	Kai Yu 0011, Qingfeng Zhang, Zekun Liu, Yimeng Du, Xinjiao Gao, Qi Zhao, Han Cheng, Xiaoxing Li, Zexian Liu	Deep learning based prediction of reversible HAT/HDAC-specific lysine acetylation.	Briefings Bioinform.	2020	DBLP DOI BibTeX RDF
27	Nafiseh Banirazi Motlagh, Bahram Mohammadpour Esfahani, Behnoosh Ashrafi, Fatemeh Zare-Mirakabad	The assessment of histone acetylation marks in the vicinity of transcription factor binding sites in human CD4 + T cells using information theory methods.	Comput. Biol. Chem.	2020	DBLP DOI BibTeX RDF
27	Qiao Ning, Miao Yu, Jinchao Ji, Zhiqiang Ma 0003, Xiaowei Zhao 0004	Analysis and prediction of human acetylation using a cascade classifier based on support vector machine.	BMC Bioinform.	2019	DBLP DOI BibTeX RDF
27	Meiqi Wu, Yingxi Yang, Hui Wang, Yan Xu	A deep learning method to more accurately recall known lysine acetylation sites.	BMC Bioinform.	2019	DBLP DOI BibTeX RDF
27	Xiaowei Zhao 0004, Jiagen Li, Rui Wang, Fei He 0003, Lin Yue, Minghao Yin	General and Species-Specific Lysine Acetylation Site Prediction Using a Bi-Modal Deep Architecture.	IEEE Access	2018	DBLP DOI BibTeX RDF
27	Guodong Chen, Man Cao, Kun Luo, Lina Wang, Pingping Wen, Shaoping Shi 0001	ProAcePred: prokaryote lysine acetylation sites prediction based on elastic net feature optimization.	Bioinform.	2018	DBLP DOI BibTeX RDF
27	Yingxi Yang, Hui Wang, Jun Ding, Yan Xu	iAcet-Sumo: Identification of lysine acetylation and sumoylation sites in proteins by multi-class transformation methods.	Comput. Biol. Medicine	2018	DBLP DOI BibTeX RDF
27	Mohanalakshmi Narasumani, Paul M. Harrison	Discerning evolutionary trends in post-translational modification and the effect of intrinsic disorder: Analysis of methylation, acetylation and ubiquitination sites in human proteins.	PLoS Comput. Biol.	2018	DBLP DOI BibTeX RDF
27	Alicia Tapias, Zhao-Qi Wang	Lysine Acetylation and Deacetylation in Brain Development and Neuropathies.	Genom. Proteom. Bioinform.	2017	DBLP DOI BibTeX RDF
27	Kazunori D. Yamada, Satoshi Omori, Hafumi Nishi, Masaru Miyagi	Identification of the sequence determinants of protein N-terminal acetylation through a decision tree approach.	BMC Bioinform.	2017	DBLP DOI BibTeX RDF
27	Yang Xu, Shuang Zhang, Shaofeng Lin, Yaping Guo, Wankun Deng, Ying Zhang 0052, Yu Xue 0001	WERAM: a database of writers, erasers and readers of histone acetylation and methylation in eukaryotes.	Nucleic Acids Res.	2017	DBLP DOI BibTeX RDF
27	Shinji Iida, Tadaaki Mashimo, Takashi Kurosawa, Hironobu Hojo, Hiroya Muta, Yuji Goto, Yoshifumi Fukunishi, Haruki Nakamura, Junichi Higo	Variation of free-energy landscape of the p53 C-terminal domain induced by acetylation: Enhanced conformational sampling.	J. Comput. Chem.	2016	DBLP DOI BibTeX RDF
27	You Zhou 0005, Tao Huang 0004, Guohua Huang, Ning Zhang 0005, Xiangyin Kong, Yu-Dong Cai 0001	Prediction of protein N-formylation and comparison with N-acetylation based on a feature selection method.	Neurocomputing	2016	DBLP DOI BibTeX RDF
27	Jinzen Ikebe, Shun Sakuraba, Hidetoshi Kono	H3 Histone Tail Conformation within the Nucleosome and the Impact of K14 Acetylation Studied Using Enhanced Sampling Simulation.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
27	Wenzheng Bao, Zhichao Jiang, Kyungsook Han, De-Shuang Huang	Prediction of Lysine Acetylation Sites Based on Neural Network.	ICIC (2)	2016	DBLP DOI BibTeX RDF
27	Anju C. Pushkaran, Namrata Nataraj, Nisha Nair, Friedrich Götz, Raja Biswas, C. Gopi Mohan	Understanding the Structure-Function Relationship of Lysozyme Resistance in Staphylococcus aureus by Peptidoglycan O-Acetylation Using Molecular Docking, Dynamics, and Lysis Assay.	J. Chem. Inf. Model.	2015	DBLP DOI BibTeX RDF
27	Christophe Charpilloz	Analysis of large biological data: metabolic network modularization and prediction of N-terminal acetylation.		2015	RDF
27	Hirofumi Fujimoto, Mariko Higuchi, Manabu Koike, Hirotaka Ode, Miroslav Pinak, Juraj Kotulic Bunta, Toshiyuki Nemoto, Takashi Sakudoh, Naoko Honda, Hideaki Maekawa, Kimiaki Saito, Kozo Tsuchida	A possible overestimation of the effect of acetylation on lysine residues in KQ mutant analysis.	J. Comput. Chem.	2012	DBLP DOI BibTeX RDF
27	Likun Wang 0003, Yipeng Du, Ming Lu, Tingting Li	ASEB: a web server for KAT-specific acetylation site prediction.	Nucleic Acids Res.	2012	DBLP DOI BibTeX RDF
27	Zexian Liu, Jun Cao, Xinjiao Gao, Yanhong Zhou, Longping Wen, Xiangjiao Yang, Xuebiao Yao, Jian Ren 0002, Yu Xue 0001	CPLA 1.0: an integrated database of protein lysine acetylation.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
27	Tzong-Yi Lee, Justin Bo-Kai Hsu, Feng-Mao Lin, Wen-Chi Chang, Po-Chiang Hsu, Hsien-Da Huang	N-Ace: Using solvent accessibility and physicochemical properties to identify protein N-acetylation sites.	J. Comput. Chem.	2010	DBLP DOI BibTeX RDF
27	Stephen A. Ramsey, Theo A. Knijnenburg, Kathleen A. Kennedy, Daniel E. Zak, Mark Gilchrist, Elizabeth S. Gold, Carrie D. Johnson, Aaron E. Lampano, Vladimir Litvak, Garnet Navarro, Tetyana Stolyar, Alan Aderem, Ilya Shmulevich	Genome-wide histone acetylation data improve prediction of mammalian transcription factor binding sites.	Bioinform.	2010	DBLP DOI BibTeX RDF
27	Florian Gnad, Shubin Ren, Chunaram Choudhary, Jürgen Cox, Matthias Mann 0002	Predicting post-translational lysine acetylation using support vector machines.	Bioinform.	2010	DBLP DOI BibTeX RDF
27	Florian Markowetz, Klaas W. Mulder, Edoardo M. Airoldi, Ihor Lemischka, Olga G. Troyanskaya	Mapping Dynamic Histone Acetylation Patterns to Gene Expression in Nanog-Depleted Murine Embryonic Stem Cells.	PLoS Comput. Biol.	2010	DBLP DOI BibTeX RDF
27	Qian Xiang, Xianhua Dai, Yangyang Deng, Caisheng He, Jiang Wang 0014, Jihua Feng, Zhiming Dai	Missing value imputation for microarray gene expression data using histone acetylation information.	BMC Bioinform.	2008	DBLP DOI BibTeX RDF
27	Grzegorz Porebski, Piotr Obtulowicz, Monika Piwowar, Irena Roterman-Konieczna	Association between the N-acetylation genetic polymorphism and aspirin-induced urticartia.	Bio Algorithms Med Syst.	2008	DBLP BibTeX RDF
27	Xiang Guo, Kay Tatsuoka, Rongxiang Liu	Histone acetylation and transcriptional regulation in the genome of Saccharomyces cerevisiae.	Bioinform.	2006	DBLP DOI BibTeX RDF
27	Árpád Karsai, Attila Nagy, András Kengyel, Zsolt Mártonfalvi, László Grama, Botondtól Penke, Miklós S. Z. Kellermayer	Effect of Lysine-28 Side-Chain Acetylation on the Nanomechanical Behavior of Alzheimer Amyloid beta25-35 Fibrils.	J. Chem. Inf. Model.	2005	DBLP DOI BibTeX RDF
27	Lars Kiemer, Jannick Dyrløv Bendtsen, Nikolaj Blom	NetAcet: prediction of N-terminal acetylation sites.	Bioinform.	2005	DBLP DOI BibTeX RDF
27	Lang Li 0001, Huidong Shi, Constantin T. Yiannoutsos, Tim Hui-Ming Huang, Kenneth P. Nephew	Epigenetic Hypothesis Tests for Methylation and Acetylation in a Triple Microarray System.	J. Comput. Biol.	2005	DBLP DOI BibTeX RDF
26	Guo-Cheng Yuan, Jun S. Liu	Statistial Analysis of nucleosome occupancy and histone modification data.	BIBE	2007	DBLP DOI BibTeX RDF
26	Kai Wang 0045, Ilya Nemenman, Nilanjana Banerjee, Adam A. Margolin, Andrea Califano	Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes.	RECOMB	2006	DBLP DOI BibTeX RDF