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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 530 occurrences of 373 keywords
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Results
Found 1702 publication records. Showing 1702 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
80 | Abhinav Sarje, Srinivas Aluru |
Parallel biological sequence alignments on the Cell Broadband Engine. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS ![In: 22nd IEEE International Symposium on Parallel and Distributed Processing, IPDPS 2008, Miami, Florida USA, April 14-18, 2008, pp. 1-11, 2008, IEEE. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
80 | Eric Breimer, Mark K. Goldberg |
Learning Significant Alignments: An Alternative to Normalized Local Alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISMIS ![In: Foundations of Intelligent Systems, 13th International Symposium, ISMIS 2002, Lyon, France, June 27-29, 2002, Proceedings, pp. 37-45, 2002, Springer, 3-540-43785-1. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
71 | Jérôme Euzenat, Adrian Mocan, François Scharffe |
Ontology Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Ontology Management ![In: Ontology Management, Semantic Web, Semantic Web Services, and Business Applications, pp. 177-206, 2008, Springer, 978-0-387-69900-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
alignment management, alignment server, ontology mediation, mapping, ontology alignment, ontology matching |
67 | Watson Wei Khong Chua, Angela Eck Soong Goh |
Candidate reduction and alignment improvement techniques used in aligning ontologies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
iiWAS ![In: iiWAS'2009 - The Eleventh International Conference on Information Integration and Web-based Applications and Services, 14-16 December 2009, Kuala Lumpur, Malaysia, pp. 72-79, 2009, ACM, 978-1-60558-660-1. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
alignment improvement, candidate reduction, mapping, survey, matching, ontology alignment |
67 | Jadwiga R. Bienkowska, Lihua Yu, Sophia Zarakhovich, Robert G. Rogers, Temple F. Smith |
Comprehensive statistical method for protein fold recognition. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, RECOMB 2000, Tokyo, Japan, April 8-11, 2000, pp. 76-85, 2000, ACM, 1-58113-186-0. The full citation details ...](Pics/full.jpeg) |
2000 |
DBLP DOI BibTeX RDF |
|
65 | Mourad Elloumi, Ahmed Mokaddem |
An Algorithm for Multiple and Global Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIRD ![In: Bioinformatics Research and Development, Second International Conference, BIRD 2008, Vienna, Austria, July 7-9, 2008, Proceedings, pp. 479-488, 2008, Springer, 978-3-540-70598-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
multiple and global alignments, common subsequence, algorithms, complexities, Strings, divide-and-conquer strategy |
65 | Stjepan Rajko, Srinivas Aluru |
Space and Time Optimal Parallel Sequence Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Parallel Distributed Syst. ![In: IEEE Trans. Parallel Distributed Syst. 15(12), pp. 1070-1081, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
parallel algorithms, Computational biology, sequence alignments, space-efficient, parallel dynamic programming |
61 | John D. Kececioglu, Dean Starrett |
Aligning alignments exactly. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 85-96, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
linear gap costs, sum of pairs, exact algorithms, multiple sequence alignment |
61 | Hyuk-Jae Lee, José A. B. Fortes |
Data Alignments for Modular Time-Space Mappings of BLAS-like Algorithms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ASAP ![In: The International Conference on Application Specific Array Processors (ASAP'95), July 24-26, 1995, Strasbourg, France, pp. 34-, 1995, IEEE Computer Society, 0-8186-7109-2. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
modular mapping, data-distribution-independent module, parallelizing compiler, BLAS, space-time mapping, data alignment |
57 | Xiaoyong Fang, Zhenghua Wang, Zhigang Luo, Bo Yuan, Fan Ding |
The detection and assessment of possible RNA secondary structure using multiple sequence alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2007 ACM Symposium on Applied Computing (SAC), Seoul, Korea, March 11-15, 2007, pp. 133-137, 2007, ACM, 1-59593-480-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
multiple sequence alignment, RNA secondary structure, non-coding RNA |
57 | John D. Kececioglu, Eagu Kim |
Simple and Fast Inverse Alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 2-5, 2006, Proceedings, pp. 441-455, 2006, Springer, 3-540-33295-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
57 | Sing-Hoi Sze, Yue Lu, Qingwu Yang |
A Polynomial Time Solvable Formulation of Multiple Sequence Alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 9th Annual International Conference, RECOMB 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings, pp. 204-216, 2005, Springer, 3-540-25866-3. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
52 | Yong-Zeng Xue, Sheng Li 0003, Tiejun Zhao, Muyun Yang, Jun Li |
Bilingual Phrase Extraction from N-Best Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICICIC (3) ![In: First International Conference on Innovative Computing, Information and Control (ICICIC 2006), 30 August - 1 September 2006, Beijing, China, pp. 410-414, 2006, IEEE Computer Society, 0-7695-2616-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
52 | Georgios Joannis Pappas Jr., Shankar Subramaniam |
Analysis of the Effects of Multiple Sequence Alignments in Protein Secondary Structure Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology, Brazilian Symposium on Bioinformatics, BSB 2005, Sao Leopoldo, Brazil, July 27-29, 2005, Proceedings, pp. 128-140, 2005, Springer, 3-540-28008-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
52 | Bin Ma 0002, Zhuozhi Wang, Kaizhong Zhang |
Alignment between Two Multiple Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 14th Annual Symposium, CPM 2003, Morelia, Michocán, Mexico, June 25-27, 2003, Proceedings, pp. 254-265, 2003, Springer, 3-540-40311-6. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
52 | Raymond Wheeler |
A Method of Consolidating and Combining EST and mRNA Alignments to a Genome to Enumerate Supported Splice Variants. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, Second International Workshop, WABI 2002, Rome, Italy, September 17-21, 2002, Proceedings, pp. 201-209, 2002, Springer, 3-540-44211-1. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
52 | Hyuk-Jae Lee, José A. B. Fortes |
Automatic Generation of Modular Time-Space Mappings and Data Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. VLSI Signal Process. ![In: J. VLSI Signal Process. 19(2), pp. 195-208, 1998. The full citation details ...](Pics/full.jpeg) |
1998 |
DBLP DOI BibTeX RDF |
|
52 | Gaston H. Gonnet, Steven A. Benner |
Probabilistic Ancestral Sequences and Multiple Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SWAT ![In: Algorithm Theory - SWAT '96, 5th Scandinavian Workshop on Algorithm Theory, Reykjavík, Iceland, July 3-5, 1996, Proceedings, pp. 380-391, 1996, Springer, 3-540-61422-2. The full citation details ...](Pics/full.jpeg) |
1996 |
DBLP DOI BibTeX RDF |
|
48 | Daniel DeBlasio, Jocelyne Bruand, Shaojie Zhang |
PMFastR: A New Approach to Multiple RNA Structure Alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 9th International Workshop, WABI 2009, Philadelphia, PA, USA, September 12-13, 2009. Proceedings, pp. 49-61, 2009, Springer, 978-3-642-04240-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
multiple RNA alignment, RNA sequence-structure alignment, iterative alignment |
48 | Eagu Kim, John D. Kececioglu |
Learning Scoring Schemes for Sequence Alignment from Partial Examples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 5(4), pp. 546-556, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Linear programming, Pattern matching, Biology and genetics, Analysis of Algorithms and Problem Complexity |
48 | Yao-ming Huang, Christopher Bystroff |
Improved pairwise alignment of proteins in the Twilight Zone using local structure predictions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 243-246, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
48 | Markus Bauer 0001, Gunnar W. Klau, Knut Reinert |
Multiple Structural RNA Alignment with Lagrangian Relaxation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 5th International Workshop, WABI 2005, Mallorca, Spain, October 3-6, 2005, Proceedings, pp. 303-314, 2005, Springer, 3-540-29008-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
48 | Jérôme Euzenat |
An API for Ontology Alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISWC ![In: The Semantic Web - ISWC 2004: Third International Semantic Web Conference,Hiroshima, Japan, November 7-11, 2004. Proceedings, pp. 698-712, 2004, Springer, 3-540-23798-4. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
48 | Hiroshi Matsui, Kengo Sato, Yasubumi Sakakibara |
Pair Stochastic Tree Adjoining Grammars for Aligning and Predicting Pseudoknot RNA Structures. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 290-299, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
48 | Siddhartha Chatterjee, John R. Gilbert, Robert Schreiber, Shang-Hua Teng |
Automatic Array Alignment in Data-Parallel Programs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
POPL ![In: Conference Record of the Twentieth Annual ACM SIGPLAN-SIGACT Symposium on Principles of Programming Languages, Charleston, South Carolina, USA, January 1993, pp. 16-28, 1993, ACM Press, 0-89791-560-7. The full citation details ...](Pics/full.jpeg) |
1993 |
DBLP DOI BibTeX RDF |
Fortran 90 |
42 | Ankit Agrawal 0001, Arka P. Ghosh, Xiaoqiu Huang 0001 |
Estimating Pairwise Statistical Significance of Protein Local Alignments Using a Clustering-Classification Approach Based on Amino Acid Composition. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings, pp. 62-73, 2008, Springer, 978-3-540-79449-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Pairwise local alignment, Clustering, Classification, Statistical significance |
42 | Tak Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Chi-Kwong Wong, Siu-Ming Yiu |
An Experimental Study of Compressed Indexing and Local Alignments of DNA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
COCOA ![In: Combinatorial Optimization and Applications, First International Conference, COCOA 2007, Xi'an, China, August 14-16, 2007, Proceedings, pp. 242-254, 2007, Springer, 978-3-540-73555-7. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
42 | Morris Michael, Christoph Dieterich, Jens Stoye |
Suboptimal Local Alignments Across Multiple Scoring Schemes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 4th International Workshop, WABI 2004, Bergen, Norway, September 17-21, 2004, Proceedings, pp. 99-110, 2004, Springer, 3-540-23018-1. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
42 | Giuseppe Lancia, Robert D. Carr, Brian Walenz, Sorin Istrail |
101 optimal PDB structure alignments: a branch-and-cut algorithm for the maximum contact map overlap problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fifth Annual International Conference on Computational Biology, RECOMB 2001, Montréal, Québec, Canada, April 22-25, 2001, pp. 193-202, 2001, ACM, 1-58113-353-7. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
41 | Agnès Desolneux, Lionel Moisan, Jean-Michel Morel |
A Grouping Principle and Four Applications. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Pattern Anal. Mach. Intell. ![In: IEEE Trans. Pattern Anal. Mach. Intell. 25(4), pp. 508-513, 2003. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
Gestalt grouping laws, a contrario probabilistic model, binomial law, number of false alarms, histogram modes, clusters, alignments |
41 | Juan Méndez, Antonio Falcón, Javier Lorenzo 0001 |
A Procedure for Biological Sensitive Pattern Matching in Protein Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IbPRIA ![In: Pattern Recognition and Image Analysis, First Iberian Conference, IbPRIA 2003, Puerto de Andratx, Mallorca, Spain, June 4-6, 2003, Proceedings, pp. 547-555, 2003, Springer, 3-540-40217-9. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
Biological Pattern Analysis, Pattern Matching, Multidimensional Scaling, Sequence Alignments, SIMD Processing |
41 | I. Scott MacKenzie, R. William Soukoreff |
A character-level error analysis technique for evaluating text entry methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
NordiCHI ![In: Proceedings of the Second Nordic Conference on Human-Computer Interaction 2002, Aarhus, Denmark, October 19-23, 2002, pp. 243-246, 2002, ACM, 1-58113-616-1. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
minimum string distance, optimal alignments, mobile computing, text entry, error rates, sequence comparison |
41 | Shintaro Minami, Kengo Sawada, George Chikenji |
MICAN : a protein structure alignment algorithm that can handle Multiple-chains, Inverse alignments, Ca only models, Alternative alignments, and Non-sequential alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 14, pp. 24, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
|
41 | Takahiro Ikeda, Hiroshi Imai |
Enhanced A* Algorithms for Multiple Alignments: Optimal Alignments for Several Sequences and k-Opt Approximate Alignments for Large Cases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Theor. Comput. Sci. ![In: Theor. Comput. Sci. 210(2), pp. 341-374, 1999. The full citation details ...](Pics/full.jpeg) |
1999 |
DBLP DOI BibTeX RDF |
|
38 | Ana Arribas-Gil, Dirk Metzler, Jean-Louis Plouhinec |
Statistical Alignment with a Sequence Evolution Model Allowing Rate Heterogeneity along the Sequence. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(2), pp. 281-295, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
mathematics and statistics, sequence evolution, Markov processes, probabilistic algorithms, biology and genetics |
38 | Yonggang Deng, William J. Byrne |
HMM Word and Phrase Alignment for Statistical Machine Translation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Speech Audio Process. ![In: IEEE Trans. Speech Audio Process. 16(3), pp. 494-507, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
38 | Jérôme Euzenat |
Algebras of Ontology Alignment Relations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISWC ![In: The Semantic Web - ISWC 2008, 7th International Semantic Web Conference, ISWC 2008, Karlsruhe, Germany, October 26-30, 2008. Proceedings, pp. 387-402, 2008, Springer, 978-3-540-88563-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
38 | Horst Kargl, Manuel Wimmer |
SmartMatcher - How Examples and a Dedicated Mapping Language can Improve theQuality of Automatic Matching Approaches. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CISIS ![In: Second International Conference on Complex, Intelligent and Software Intensive Systems (CISIS-2008), March 4th-7th, 2008, Technical University of Catalonia, Barcelona, Spain, pp. 879-885, 2008, IEEE Computer Society, 978-0-7695-3109-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
38 | Elisa Ricci 0001, Tijl De Bie, Nello Cristianini |
Learning to Align: A Statistical Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IDA ![In: Advances in Intelligent Data Analysis VII, 7th International Symposium on Intelligent Data Analysis, IDA 2007, Ljubljana, Slovenia, September 6-8, 2007, Proceedings, pp. 25-36, 2007, Springer, 978-3-540-74824-3. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
38 | Eagu Kim, John D. Kececioglu |
Inverse Sequence Alignment from Partial Examples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 7th International Workshop, WABI 2007, Philadelphia, PA, USA, September 8-9, 2007, Proceedings, pp. 359-370, 2007, Springer, 978-3-540-74125-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
38 | Vincenzo Cutello, D. Lee, Giuseppe Nicosia, Mario Pavone, I. Prizzi |
Aligning Multiple Protein Sequences by Hybrid Clonal Selection Algorithm with Insert-Remove-Gaps and BlockShuffling Operators. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICARIS ![In: Artificial Immune Systems, 5th International Conference, ICARIS 2006, Oeiras, Portugal, September 4-6, 2006, Proceedings, pp. 321-334, 2006, Springer, 3-540-37749-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
hypermutation operator, bioinformatics, multiple sequence alignment, immune algorithms, clonal selection algorithms, protein sequences |
38 | Rong Zhou 0001, Eric A. Hansen |
K-Group A for Multiple Sequence Alignment with Quasi-Natural Gap Costs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICTAI ![In: 16th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2004), 15-17 November 2004, Boca Raton, FL, USA, pp. 688-695, 2004, IEEE Computer Society, 0-7695-2236-X. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
38 | Paola Bonizzoni, Graziano Pesole, Raffaella Rizzi |
A Method to Detect Gene Structure and Alternative Splice Sites by Agreeing ESTs to a Genomic Sequence. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, Third International Workshop, WABI 2003, Budapest, Hungary, September 15-20, 2003, Proceedings, pp. 63-77, 2003, Springer, 3-540-20076-2. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
36 | Krishna M. Roskin, Mark Diekhans, David Haussler |
Scoring two-species local alignments to try to statistically separate neutrally evolving from selected DNA segments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sventh Annual International Conference on Computational Biology, RECOMB 2003, Berlin, Germany, April 10-13, 2003, pp. 257-266, 2003, ACM, 1-58113-635-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
CpG effect, ancestral repeat, context-dependent base substitutions, dinucleotide dependence, fraction of human genome under selection, mouse-human alignments, neutral evolution, mutual information, comparative genomics, evolutionary models |
36 | Valentina Di Francesco, Peter J. Munson, Jean Garnier |
Use of multiple alignments in protein secondary structure prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 285-291, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
training datasets, homologous proteins, well-characterized prediction methods, jury method, quadratic-logistic method, related proteins, three state prediction, consensus predictions, gap-permissive positions, coil state, reduced noise, database, profiling, database management systems, COMBINE, biology computing, proteins, chemistry, secondary structure, prediction accuracy, chemistry computing, averaging, protein secondary structure prediction, multiple alignments |
33 | Alexander V. Mantzaris, Dirk Husmeier |
Distinguishing Regional from Within-Codon Rate Heterogeneity in DNA Sequence Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PRIB ![In: Pattern Recognition in Bioinformatics, 4th IAPR International Conference, PRIB 2009, Sheffield, UK, September 7-9, 2009. Proceedings, pp. 187-198, 2009, Springer, 978-3-642-04030-6. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
33 | Pavol Hanus, Janis Dingel, Georg Chalkidis, Joachim Hagenauer |
Source Coding Scheme for Multiple Sequence Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DCC ![In: 2009 Data Compression Conference (DCC 2009), 16-18 March 2009, Snowbird, UT, USA, pp. 183-192, 2009, IEEE Computer Society, 978-0-7695-3592-0. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
33 | Roberto Andreani, José Mario Martínez, Leandro Martínez, Flávio S. Yano |
Continuous optimization methods for structure alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Math. Program. ![In: Math. Program. 112(1), pp. 93-124, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Protein alignment, Order-value optimization, Continuous optimization, Gauss-Newton method, Structural alignment |
33 | Yahui Lu, Li Zhang 0065, Jiaguang Sun 0001 |
Towards trace semantics for WS-CDL with alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2008 ACM Symposium on Applied Computing (SAC), Fortaleza, Ceara, Brazil, March 16-20, 2008, pp. 95-99, 2008, ACM, 978-1-59593-753-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
semantics, trace, alignment, WS-CDL |
33 | Fa Zhang 0001, Lin Xu, Zhiyong Liu 0002, Bo Yuan |
Improved structural modeling based on conserved domain clusters and structure-anchored alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2007 ACM Symposium on Applied Computing (SAC), Seoul, Korea, March 11-15, 2007, pp. 128-132, 2007, ACM, 1-59593-480-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
domain cluster, modeling, sequence alignment, protein structure |
33 | Brendan Mumey, Nathaniel Ohler, Thomas Angel, Algirdas J. Jesaitis, Edward A. Dratz |
Filtering Epitope Alignments to Improve Protein Surface Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISPA Workshops ![In: Frontiers of High Performance Computing and Networking - ISPA 2006 Workshops, ISPA 2006 International Workshops, FHPCN, XHPC, S-GRACE, GridGIS, HPC-GTP, PDCE, ParDMCom, WOMP, ISDF, and UPWN, Sorrento, Italy, December 4-7, 2006, Proceedings, pp. 648-657, 2006, Springer, 3-540-49860-5. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
33 | Xun Tu, Kajal T. Claypool, Cindy X. Chen |
ACache: Using Caching to Improve the Performance of Multiple Sequence Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SSDBM ![In: 18th International Conference on Scientific and Statistical Database Management, SSDBM 2006, 3-5 July 2006, Vienna, Austria, Proceedings, pp. 343-352, 2006, IEEE Computer Society, 0-7695-2590-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
33 | Yuheng Li, Mario Lauria, Ralf Bundschuh |
Suboptimal Alignments Improve the Detection of Weak Homologs in Sequence Database Searches. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 19-21 October 2005, Minneapolis, MN, USA, pp. 153-160, 2005, IEEE Computer Society, 0-7695-2476-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
PSI-BLAST, suboptimal alignment, sequence alignment, hybrid algorithm, forward-backward algorithm |
33 | Constantin Bannert, Jens Stoye |
Protein Annotation by Secondary Structure Based Alignments (PASSTA). ![Search on Bibsonomy](Pics/bibsonomy.png) |
CompLife ![In: Computational Life Sciences, First International Symposium, CompLife 2005, Konstanz, Germany, September 25-27, 2005, Proceedings, pp. 79-90, 2005, Springer, 3-540-29104-0. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
33 | Steinar Thorvaldsen, Tor Flå, Nils Willassen |
Extracting Molecular Diversity Between Populations Through Sequence Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBMDA ![In: Biological and Medical Data Analysis, 6th International Symposium, ISBMDA 2005, Aveiro, Portugal, November 10-11, 2005, Proceedings, pp. 317-328, 2005, Springer, 3-540-29674-3. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
physicochemical properties, extremophiles, Fisher’s exact test, Wilcoxon test, structural analysis, sequence analysis |
33 | Matthias Höchsmann, Björn Voss, Robert Giegerich |
Pure Multiple RNA Secondary Structure Alignments: A Progressive Profile Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 1(1), pp. 53-62, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
33 | Gregory Kucherov, Laurent Noé, Yann Ponty |
Estimating Seed Sensitivity on Homogeneous Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 19-21 March 2004, Taichung, Taiwan, pp. 387-394, 2004, IEEE Computer Society, 0-7695-2173-8. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
33 | Necip Fazil Ayan, Bonnie J. Dorr, Nizar Habash |
Multi-align: Combining Linguistic and Statistical Techniques to Improve Alignments for Adaptable MT. ![Search on Bibsonomy](Pics/bibsonomy.png) |
AMTA ![In: Machine Translation: From Real Users to Research, 6th Conference of the Association for Machine Translation in the Americas, AMTA 2004, Washington, DC, USA, September 28-October 2, 2004, Proceedings, pp. 17-26, 2004, Springer, 3-540-23300-8. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
33 | Lior Pachter, Fumei Lam |
Picking alignments from (steiner) trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sixth Annual International Conference on Computational Biology, RECOMB 2002, Washington, DC, USA, April 18-21, 2002, pp. 246-253, 2002, ACM, 1-58113-498-3. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
33 | Natsuhiko Futamura, Srinivas Aluru, Xiaoqiu Huang 0001 |
Parallel Syntenic Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HiPC ![In: High Performance Computing - HiPC 2002, 9th International Conference, Bangalore, India, December 18-21, 2002, Proceedings, pp. 420-430, 2002, Springer, 3-540-00303-7. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
33 | Niklas von Öhsen, Ralf Zimmer |
Improving Profile-Profile Alignments via Log Average Scoring. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, First International Workshop, WABI 2001, Aarhus, Denmark, August 28-31, 2001, Proceedings, pp. 11-26, 2001, Springer, 3-540-42516-0. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
32 | Alexandre Tchourbanov, Daniel Quest, Hesham H. Ali, Mark A. Pauley, Robert B. Norgren |
A New Approach for Gene Annotation Using Unambiguous Sequence Joining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 2nd IEEE Computer Society Bioinformatics Conference, CSB 2003, Stanford, CA, USA, August 11-14, 2003, pp. 353-362, 2003, IEEE Computer Society, 0-7695-2000-6. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
Spliced alignments, RefSeq, dynamic programming, BLAST |
32 | David Fernández-Baca, Timo Seppäläinen, Giora Slutzki |
Bounds for Parametric Sequence Comparison. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SPIRE/CRIWG ![In: Sixth International Symposium on String Processing and Information Retrieval and Fifth International Workshop on Groupware, SPIRE/CRIWG 1999, Cancun, Mexico, September 21-24, 1999, pp. 55-62, 1999, IEEE Computer Society, 0-7695-0268-7. The full citation details ...](Pics/full.jpeg) |
1999 |
DBLP DOI BibTeX RDF |
global alignments, parametric computing, sensitivity analysis, computational biology, Sequence comparison |
32 | Sekhar R. Sarukkai, Jerry C. Yan, Melisa Schmidt |
Automated instrumentation and monitoring of data movement in parallel programs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPPS ![In: Proceedings of IPPS '95, The 9th International Parallel Processing Symposium, April 25-28, 1995, Santa Barbara, California, USA, pp. 621-629, 1995, IEEE Computer Society, 0-8186-7074-6. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
data-structure alignments, inter-processor data-structure interactions, compiler front end tools, tracking data-structure movements, NAS benchmarks, parallel programming, parallel programs, data structures, message passing, data flow analysis, software performance evaluation, program diagnostics, performance tools, message passing programs, inter-processor communications, data movement |
32 | Webb Miller, Ahmed Elsherbini, Jamie Peck, Cathy Riemer, Scott Schwartz, Nikola Stojanovic, Ross C. Hardison |
A database for globin gene expression data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 62-71, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
globin gene expression database, prototype database, /spl beta/-like globin gene cluster, mammals, globin gene biologists, sequence-analysis problems, e-mail server, highly conserved regions, run sequence features, World-Wide Web server, annotated alignment, database management systems, query languages, experimental results, sequence alignments, regulation, electronic mail, genetics, biology computing, information networks, data repository, graphical presentations |
32 | Jens Gregor, Michael G. Thomason |
Hybrid Pattern Recognition Using Markov Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Pattern Anal. Mach. Intell. ![In: IEEE Trans. Pattern Anal. Mach. Intell. 15(6), pp. 651-656, 1993. The full citation details ...](Pics/full.jpeg) |
1993 |
DBLP DOI BibTeX RDF |
hybrid pattern recognition, learning strings, string-to-network alignments, structural characteristics, nonparametric decision-theoretic pattern classifiers, class membership, linear discriminant-function classifiers, maximum-likelihood classifier, string orientation, human banded chromosomes, pattern recognition, similarity measures, Markov processes, decision theory, biology computing, biology computing, nonparametric statistics, Markov networks, nearest-neighbor rule |
29 | Eagu Kim, Travis J. Wheeler, John D. Kececioglu |
Learning Models for Aligning Protein Sequences with Predicted Secondary Structure. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 13th Annual International Conference, RECOMB 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings, pp. 512-531, 2009, Springer, 978-3-642-02007-0. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
inverse parametric alignment, substitution score matrices, affine gap penalties, Sequence alignment, protein secondary structure |
29 | Ashwin M. Aji, Wu-chun Feng, Filip Blagojevic, Dimitrios S. Nikolopoulos |
Cell-SWat: modeling and scheduling wavefront computations on the cell broadband engine. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Conf. Computing Frontiers ![In: Proceedings of the 5th Conference on Computing Frontiers, 2008, Ischia, Italy, May 5-7, 2008, pp. 13-22, 2008, ACM, 978-1-60558-077-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
wavefront algorithms, cell broadband engine, smith-waterman |
29 | Antoine Zimmermann, Chan Le Duc |
Reasoning with a Network of Aligned Ontologies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RR ![In: Web Reasoning and Rule Systems, Second International Conference, RR 2008, Karlsruhe, Germany, October 31-November 1, 2008. Proceedings, pp. 43-57, 2008, Springer, 978-3-540-88736-2. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
29 | Nils Weskamp, Eyke Hüllermeier, Daniel Kuhn, Gerhard Klebe |
Multiple Graph Alignment for the Structural Analysis of Protein Active Sites. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(2), pp. 310-320, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
structural pattern discovery, fuzzy patterns, graph mining, Knowledge discovery in databases, drug design |
29 | Xiaoyong Fang, Zhigang Luo, Bo Yuan, Zhenghua Wang, Fan Ding |
Constructing Structural Alignment of RNA Sequences by Detecting and Assessing Conserved Stems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
LSMS (2) ![In: Life System Modeling and Simulation, International Conference, LSMS 2007, Shanghai, China, September 14-17, 2007, Proceedings, pp. 208-217, 2007, Springer, 978-3-540-74770-3. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
29 | Adrian Mocan, Emilia Cimpian, Mick Kerrigan |
Formal Model for Ontology Mapping Creation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISWC ![In: The Semantic Web - ISWC 2006, 5th International Semantic Web Conference, ISWC 2006, Athens, GA, USA, November 5-9, 2006, Proceedings, pp. 459-472, 2006, Springer, 3-540-49029-9. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
29 | Antti Rasinen, Jaakko Hollmén, Heikki Mannila |
Analysis of Linux Evolution Using Aligned Source Code Segments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Discovery Science ![In: Discovery Science, 9th International Conference, DS 2006, Barcelona, Spain, October 7-10, 2006, Proceedings, pp. 209-218, 2006, Springer, 3-540-46491-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
29 | Shungang Hua, Lidan Wang |
Photographs Alignment and High Dynamic Range Image Composition Based on Varying Exposure Levels. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICAT ![In: Advances in Artificial Reality and Tele-Existence, 16th International Conference on Artificial Reality and Telexistence, ICAT 2006, Hangzhou, China, November 29 - December 1, 2006, Proceedings, pp. 1146-1155, 2006, Springer, 3-540-49776-5. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
response curve, high dynamic range image, image alignment, image pyramid, irradiance |
29 | Minmei Hou, Piotr Berman, Louxin Zhang, Webb Miller |
Controlling Size When Aligning Multiple Genomic Sequences with Duplications. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 6th International Workshop, WABI 2006, Zurich, Switzerland, September 11-13, 2006, Proceedings, pp. 138-149, 2006, Springer, 3-540-39583-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
29 | Declan Groves, Andy Way |
Hybrid data-driven models of machine translation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Mach. Transl. ![In: Mach. Transl. 19(3-4), pp. 301-323, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Chunk coverage, Europarl corpus, Convergence, Hybrid, Statistical language models, Example-based MT, Statistical MT |
29 | Abdullah N. Arslan |
Regular Expression Constrained Sequence Alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 16th Annual Symposium, CPM 2005, Jeju Island, Korea, June 19-22, 2005, Proceedings, pp. 322-333, 2005, Springer, 3-540-26201-6. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
dynamic programming, pattern matching, Regular expression, sequence alignment, finite automaton |
29 | Jeremy Buhler, Rachel Nordgren |
Toward a Phylogenetically Aware Algorithm for Fast DNA Similarity Search. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comparative Genomics ![In: Comparative Genomics, RECOMB 2004 International Workshop, RCG 2004, Bertinoro, Italy, October 16-19, 2004, Revised Selected Papers, pp. 15-29, 2004, Springer, 3-540-24455-7. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
29 | Andreas Heger, Michael Lappe, Liisa Holm |
Accurate detection of very sparse sequence motifs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sventh Annual International Conference on Computational Biology, RECOMB 2003, Berlin, Germany, April 10-13, 2003, pp. 139-147, 2003, ACM, 1-58113-635-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
protein evolution, algorithm, consistency, sequence alignment |
29 | John W. Romein, Jaap Heringa, Henri E. Bal |
A Million-Fold Speed Improvement in Genomic Repeats Detection. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SC ![In: Proceedings of the ACM/IEEE SC2003 Conference on High Performance Networking and Computing, 15-21 November 2003, Phoenix, AZ, USA, CD-Rom, pp. 20, 2003, ACM, 1-58113-695-1. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
29 | Yongli Hu, Baocai Yin, Dehui Kong |
A New Facial Feature Extraction Method Based on Linear Combination Model . ![Search on Bibsonomy](Pics/bibsonomy.png) |
Web Intelligence ![In: 2003 IEEE / WIC International Conference on Web Intelligence, (WI 2003), 13-17 October 2003, Halifax, Canada, pp. 520-523, 2003, IEEE Computer Society, 0-7695-1932-6. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
29 | Dalila Mekhaldi, Denis Lalanne, Rolf Ingold |
Thematic alignment of recorded speech with documents. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACM Symposium on Document Engineering ![In: Proceedings of the 2003 ACM Symposium on Document Engineering, Grenoble, France, November 20-22, 2003, pp. 52-54, 2003, ACM. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
document indexing and retrieval, multi-layered structure, thematic alignment, multimodal analysis, meeting recordings |
29 | Hugh E. Williams, Justin Zobel |
Indexing and Retrieval for Genomic Databases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Knowl. Data Eng. ![In: IEEE Trans. Knowl. Data Eng. 14(1), pp. 63-78, 2002. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
genomic and scientific databases, indexing, homology search, local alignment |
29 | Jia Li 0001, Webb Miller |
Significance Of inter-species matches when evolutionary rate varies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sixth Annual International Conference on Computational Biology, RECOMB 2002, Washington, DC, USA, April 18-21, 2002, pp. 216-224, 2002, ACM, 1-58113-498-3. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
29 | Maxim Shatsky, Ruth Nussinov, Haim J. Wolfson |
MultiProt - A Multiple Protein Structural Alignment Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, Second International Workshop, WABI 2002, Rome, Italy, September 17-21, 2002, Proceedings, pp. 235-250, 2002, Springer, 3-540-44211-1. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
29 | Alexander Zien, Ralf Zimmer, Thomas Lengauer |
A simple iterative approach to parameter optimization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, RECOMB 2000, Tokyo, Japan, April 8-11, 2000, pp. 318-327, 2000, ACM, 1-58113-186-0. The full citation details ...](Pics/full.jpeg) |
2000 |
DBLP DOI BibTeX RDF |
|
29 | Saïd Abdeddaïm, Burkhard Morgenstern |
Speeding Up the DIALIGN Multiple Alignment Program by Using the 'Greedy Alignment of BIOlogical Sequences LIBrary' (GABIOS-LIB). ![Search on Bibsonomy](Pics/bibsonomy.png) |
JOBIM ![In: Computational Biology, First International Conference on Biology, Informatics, and Mathematics, JOBIM 2000, Montpellier, France, May 3-5, 2000, Selected Papers, pp. 1-11, 2000, Springer, 3-540-42242-0. The full citation details ...](Pics/full.jpeg) |
2000 |
DBLP DOI BibTeX RDF |
|
27 | Andrew F. Neuwald, Christopher J. Lanczycki, Theresa K. Hodges, Aron Marchler-Bauer |
Obtaining extremely large and accurate protein multiple sequence alignments from curated hierarchical alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Database J. Biol. Databases Curation ![In: Database J. Biol. Databases Curation 2020, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
27 | Anish Man Singh Shrestha, Naruki Yoshikawa, Kiyoshi Asai |
Combining probabilistic alignments with read pair information improves accuracy of split-alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(21), pp. 3631-3637, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
27 | Alexandre Gouveia, Nuno Silva 0001, Paulo Martins 0001 |
A rule-based DSS for transforming automatically-generated alignments into information integration alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
iiWAS ![In: Proceedings of the 19th International Conference on Information Integration and Web-based Applications & Services, iiWAS 2017, Salzburg, Austria, December 4-6, 2017, pp. 181-187, 2017, ACM. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
27 | Elena Beisswanger, Udo Hahn |
Towards valid and reusable reference alignments - ten basic quality checks for ontology alignments and their application to three different reference data sets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Biomed. Semant. ![In: J. Biomed. Semant. 3(S-1), pp. S4, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP BibTeX RDF |
|
27 | Jeremy W. Prokop, Thomas C. Leeper, Zhong-Hui Duan, Amy Milsted |
Amino acid function and docking site prediction through combining disease variants, structure alignments, sequence alignments, and molecular dynamics: a study of the HMG domain. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 13(S-2), pp. S3, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
27 | Andrei Anghelescu, Robert Kirk DeLisle, Jeffrey F. Lowrie, Anthony E. Klon, Xiaoming Xie, David J. Diller |
Technique for Generating Three-Dimensional Alignments of Multiple Ligands from One-Dimensional Alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Chem. Inf. Model. ![In: J. Chem. Inf. Model. 48(5), pp. 1041-1054, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
27 | Abha Singh Bais |
Annotated Alignments (Annotierte Alignments) ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2008 |
RDF |
|
27 | Sébastien Moretti, Frédéric Reinier, Olivier Poirot, Fabrice Armougom, Stéphane Audic, Vladimir Keduas, Cédric Notredame |
PROTOGENE: turning amino acid alignments into bona fide CDS nucleotide alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 34(Web-Server-Issue), pp. 600-603, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
27 | Mikita Suyama, David Torrents, Peer Bork |
PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 34(Web-Server-Issue), pp. 609-612, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
27 | Erik Sandelin |
Extracting multiple structural alignments from pairwise alignments: a comparison of a rigorous and a heuristic approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 21(7), pp. 1002-1009, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
27 | Webb Miller |
Building multiple alignments from pairwise alignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Appl. Biosci. ![In: Comput. Appl. Biosci. 9(2), pp. 169-176, 1993. The full citation details ...](Pics/full.jpeg) |
1993 |
DBLP DOI BibTeX RDF |
|
23 | Antoine Isaac, Shenghui Wang 0001, Claus Zinn, Henk Matthezing, Lourens van der Meij, Stefan Schlobach |
Evaluating Thesaurus Alignments for Semantic Interoperability in the Library Domain. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Intell. Syst. ![In: IEEE Intell. Syst. 24(2), pp. 76-86, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
23 | Patrick Lambrix, Qiang Liu 0002 |
Using Partial Reference Alignments to Align Ontologies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ESWC ![In: The Semantic Web: Research and Applications, 6th European Semantic Web Conference, ESWC 2009, Heraklion, Crete, Greece, May 31-June 4, 2009, Proceedings, pp. 188-202, 2009, Springer, 978-3-642-02120-6. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
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