Search results for "diploid"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
111	Jong Hyun Kim, Michael S. Waterman, Lei M. Li	Accuracy Assessment of Diploid Consensus Sequences.	IEEE ACM Trans. Comput. Biol. Bioinform.	2007	DBLP DOI BibTeX RDF	shotgun sequencing, diploid, polymorphism, Haplotype
111	A. Sima Etaner-Uyar, A. Emre Harmanci	A new population based adaptive domination change mechanism for diploid genetic algorithms in dynamic environments.	Soft Comput.	2005	DBLP DOI BibTeX RDF	Diploid chromosomes, Dominance change, Population based adaptation, Genetic algorithms, Adaptation, Diversity, Dynamic environments
80	Raffaele Calabretta, Riccardo Galbiati, Stefano Nolfi, Domenico Parisi	Two Is Better Than One: A Diploid Genotype for Neural Networks.	Neural Process. Lett.	1996	DBLP DOI BibTeX RDF	diploidy, genetic algorithms, neural networks, adaptation, genotype-phenotype mapping
80	Yukiko Yoshida, Nobue Adachi	A Diploid Genetic Algorithm for Preserving Population Diversity - pseudo-Meiosis GA.	PPSN	1994	DBLP DOI BibTeX RDF
61	Dong Xianghui, Ruwei Dai	Study Diploid System by a Hamiltonian Cycle Problem Algorithm.	GECCO	2003	DBLP DOI BibTeX RDF
56	Jonathan Lewis, Emma Hart, Graeme Ritchie	A Comparison of Dominance Mechanisms and Simple Mutation on Non-stationary Problems.	PPSN	1998	DBLP DOI BibTeX RDF
56	Tomofumi Hikage, Hitoshi Hemmi, Katsunori Shimohara	Comparison of Evolutionary Methods for Smoother Evolution.	ICES	1998	DBLP DOI BibTeX RDF
55	Shengxiang Yang	Dominance learning in diploid genetic algorithms for dynamic optimization problems.	GECCO	2006	DBLP DOI BibTeX RDF	diploid genetic algorithms, dominance change scheme, dominance learning, dynamic optimization problems
48	A. Sima Etaner-Uyar	Genetic algorithms for changing environments: Diploid representations and dominance mechanisms (Değişen ortamlar için genetik algoritmalar: Diploid gösterilimler ve baskınlık mekanizmaları)		2002	RDF
43	Erik C. Buehler, Sanjoy Das, Jack F. Cully	Equilibrium and Extinction in a Trisexual Diploid Mating System: An Investigation.	GECCO (1)	2004	DBLP DOI BibTeX RDF
37	Will Casey, Bud Mishra	A Nearly Linear-Time General Algorithm for Genome-Wide Bi-allele Haplotype Phasing.	HiPC	2003	DBLP DOI BibTeX RDF
37	Conor Ryan, J. J. Collins, David Wallin	Non-stationary Function Optimization Using Polygenic Inheritance.	GECCO	2003	DBLP DOI BibTeX RDF
37	Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers	Finite Population Models of Co-evolution and Their Application to Haploidy versus Diploidy.	GECCO	2003	DBLP DOI BibTeX RDF
37	Giuseppe Lancia, Vineet Bafna, Sorin Istrail, Ross Lippert, Russell Schwartz	SNPs Problems, Complexity, and Algorithms.	ESA	2001	DBLP DOI BibTeX RDF
37	Conor Ryan, J. J. Collins	Polygenic Inheritance - A Haploid Scheme that Can Outperform Diploidy.	PPSN	1998	DBLP DOI BibTeX RDF
24	Emrah Dönmez, Serhat Kiliçarslan, Cemil Közkurt, Aykut Diker, Fahrettin Burak Demir, Abdullah Elen	Identification of haploid and diploid maize seeds using hybrid transformer model.	Multim. Syst.	2023	DBLP DOI BibTeX RDF
24	Adrian Petrovan, Petrica C. Pop, Cosmin Sabo, Oliviu Matei	A Diploid Genetic Algorithm for Solving the Multidimensional Multi-way Number Partitioning Problem.	GECCO Companion	2023	DBLP DOI BibTeX RDF
24	Min Xie, Linfeng Yang, Chenglin Jiang, Shenshen Wu, Cheng Luo, Xin Yang, Lijuan He, Shixuan Chen, Tianquan Deng, Mingzhi Ye, Jianbing Yan, Ning Yang	gcaPDA: a haplotype-resolved diploid assembler.	BMC Bioinform.	2022	DBLP DOI BibTeX RDF
24	Kyle Fletcher, Rongkui Han, Diederik Smilde, Richard Michelmore	Variance of allele balance calculated from low coverage sequencing data infers departure from a diploid state.	BMC Bioinform.	2022	DBLP DOI BibTeX RDF
24	Anastasiya Belyaeva, Kaie Kubjas, Lawrence J. Sun, Caroline Uhler	Identifying 3D Genome Organization in Diploid Organisms via Euclidean Distance Geometry.	SIAM J. Math. Data Sci.	2022	DBLP DOI BibTeX RDF
24	Yen-Wen Wang, Cécile Ané	KIMGENS: a novel method to estimate kinship in organisms with mixed haploid diploid genetic systems robust to population structure.	Bioinform.	2022	DBLP DOI BibTeX RDF
24	Edwin A. Solares, Yuan Tao, Anthony D. Long, Brandon S. Gaut	HapSolo: an optimization approach for removing secondary haplotigs during diploid genome assembly and scaffolding.	BMC Bioinform.	2021	DBLP DOI BibTeX RDF
24	David Heller, Martin Vingron	SVIM-asm: structural variant detection from haploid and diploid genome assemblies.	Bioinform.	2021	DBLP DOI BibTeX RDF
24	Adrian Petrovan, Oliviu Matei, Rudolf Erdei	A Behavioural Study of the Crossover Operator in Diploid Genetic Algorithms.	SOCO	2020	DBLP DOI BibTeX RDF
24	Melissa Spence, Mario Banuelos, Roummel F. Marcia, Suzanne Sindi	Genomic Signal Processing for Variant Detection in Diploid Parent-Child Trios.	EUSIPCO	2020	DBLP DOI BibTeX RDF
24	Emrah Dönmez	Discrimination of Haploid and Diploid Maize Seeds Based on Deep Features.	SIU	2020	DBLP DOI BibTeX RDF
24	Yahya Altuntas, Zafer Cömert, Adnan Fatih Kocamaz	Identification of haploid and diploid maize seeds using convolutional neural networks and a transfer learning approach.	Comput. Electron. Agric.	2019	DBLP DOI BibTeX RDF
24	Witold Bolt, Aleksander Bolt, Barbara Wolnik, Jan M. Baetens, Bernard De Baets	A statistical approach to the identification of diploid cellular automata based on incomplete observations.	Biosyst.	2019	DBLP DOI BibTeX RDF
24	Larry Bull	A Simple Haploid-Diploid Evolutionary Algorithm.	CoRR	2019	DBLP BibTeX RDF
24	Michail-Antisthenis I. Tsompanas, Larry Bull, Andrew Adamatzky, Igor Balaz	Haploid-Diploid Evolution: Nature's Memetic Algorithm.	CoRR	2019	DBLP BibTeX RDF
24	Alexandra Gesine Cauer, Gürkan Yardimci, Jean-Philippe Vert, Nelle Varoquaux, William Stafford Noble	Inferring Diploid 3D Chromatin Structures from Hi-C Data.	WABI	2019	DBLP DOI BibTeX RDF
24	Emrullah Gazioglu, A. Sima Etaner-Uyar	Bayesian Immigrant Diploid Genetic Algorithm for Dynamic Environments.	EA	2019	DBLP DOI BibTeX RDF
24	Adrian Petrovan, Petrica Pop Sitar, Oliviu Matei	Haploid Versus Diploid Genetic Algorithms. A Comparative Study.	HAIS	2019	DBLP DOI BibTeX RDF
24	Xin Zhou	Human diploid assembly and variant detection methods based on linked-reads technology.		2019	RDF
24	Michael J. Roach 0001, Simon A. Schmidt, Anthony R. Borneman	Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies.	BMC Bioinform.	2018	DBLP DOI BibTeX RDF
24	Shilpa Garg, Mikko Rautiainen, Adam M. Novak, Erik Garrison, Richard Durbin, Tobias Marschall	A graph-based approach to diploid genome assembly.	Bioinform.	2018	DBLP DOI BibTeX RDF
24	Petrica C. Pop, Oliviu Matei, Camelia-Mihaela Pintea	A two-level diploid genetic based algorithm for solving the family traveling salesman problem.	GECCO	2018	DBLP DOI BibTeX RDF
24	Yahya Altuntas, Adnan Fatih Kocamaz, Rahime Cengiz, Mesut Esmeray	Classification of haploid and diploid maize seeds by using image processing techniques and support vector machines.	SIU	2018	DBLP DOI BibTeX RDF
24	Qi You, Wenying Xu, Kang Zhang, Liwei Zhang, Xin Yi, Dongxia Yao, Chun-Chao Wang, Xueyan Zhang, Xinhua Zhao, Nicholas J. Provart, Fuguang Li, Zhen Su	ccNET: Database of co-expression networks with functional modules for diploid and polyploid Gossypium.	Nucleic Acids Res.	2017	DBLP DOI BibTeX RDF
24	Shengfeng Huang, Mingjing Kang, Anlong Xu	HaploMerger2: rebuilding both haploid sub-assemblies from high-heterozygosity diploid genome assembly.	Bioinform.	2017	DBLP DOI BibTeX RDF
24	Nazim Fatès	Diploid Cellular Automata: First Experiments on the Random Mixtures of Two Elementary Rules.	AUTOMATA	2017	DBLP DOI BibTeX RDF
24	Witold Bolt, Aleksander Bolt, Barbara Wolnik, Jan M. Baetens, Bernard De Baets	A Statistical Approach to the Identification of Diploid Cellular Automata.	TPNC	2017	DBLP DOI BibTeX RDF
24	Mario Banuelos, Lasith Adhikari, Rubi Almanza, Andrew Fujikawa, Jonathan Sahagun, Katharine Sanderson, Melissa Spence, Suzanne Sindi, Roummel F. Marcia	Sparse diploid spatial biosignal recovery for genomic variation detection.	MeMeA	2017	DBLP DOI BibTeX RDF
24	Petrica C. Pop, Oliviu Matei, Cosmin Sabo	A Hybrid Diploid Genetic Based Algorithm for Solving the Generalized Traveling Salesman Problem.	HAIS	2017	DBLP DOI BibTeX RDF
24	Naoki Nariai, Kaname Kojima, Takahiro Mimori, Yosuke Kawai, Masao Nagasaki	A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes.	BMC Genom.	2016	DBLP DOI BibTeX RDF
24	Harsh Bhasin, Sushant Mehta	On the applicability of diploid genetic algorithms.	AI Soc.	2016	DBLP DOI BibTeX RDF
24	Luiz R. R. Faria, Elaine Della Giustina Soares, Eduardo do Carmo, Paulo Murilo Castro de Oliveira	Diploid male dynamics under different numbers of sexual alleles and male dispersal abilities.	Theory Biosci.	2016	DBLP DOI BibTeX RDF
24	Romeo Rizzi, Massimo Cairo, Veli Mäkinen, Daniel Valenzuela 0001	Diploid Alignment is NP-hard.	CoRR	2016	DBLP BibTeX RDF
24	Larry Bull	Haploid-Diploid Algorithms.	CoRR	2016	DBLP BibTeX RDF
24	Harsh Bhasin, Gitanshu Behal, Nimish Aggarwal, Rajkumar Saini, Shivani Choudhary	On the applicability of diploid genetic algorithms in dynamic environments.	Soft Comput.	2016	DBLP DOI BibTeX RDF
24	Paola Bonizzoni, Riccardo Dondi, Gunnar W. Klau, Yuri Pirola, Nadia Pisanti, Simone Zaccaria	On the Minimum Error Correction Problem for Haplotype Assembly in Diploid and Polyploid Genomes.	J. Comput. Biol.	2016	DBLP DOI BibTeX RDF
24	Xixi Chen, Jingli Wu, Longyu Li	Haplotyping a Diploid Single Individual with a Fast and Accurate Enumeration Algorithm.	ICIC (1)	2016	DBLP DOI BibTeX RDF
24	Jizhong Deng, Huasheng Huang, Xiaoli Yu, Ji Jin, Weisen Lin, Fagen Li, Zhijiao Song, Mei Li, Siming Gan	DiSNPindel: improved intra-individual SNP and InDel detection in direct amplicon sequencing of a diploid.	BMC Bioinform.	2015	DBLP DOI BibTeX RDF
24	Shuai Yuan, H. Richard Johnston, Guosheng Zhang, Yun Li, Yi-Juan Hu, Zhaohui S. Qin	One Size Doesn't Fit All - RefEditor: Building Personalized Diploid Reference Genome to Improve Read Mapping and Genotype Calling in Next Generation Sequencing Studies.	PLoS Comput. Biol.	2015	DBLP DOI BibTeX RDF
24	Yana Safonova, Anton Bankevich, Pavel A. Pevzner	dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes.	J. Comput. Biol.	2015	DBLP DOI BibTeX RDF
24	Veli Mäkinen, Daniel Valenzuela 0001	Diploid Alignments and Haplotyping.	ISBRA	2015	DBLP DOI BibTeX RDF
24	Lei Zhang 0041, Yu-Fang Pei, Xiaoying Fu, Yong Lin, Yu-Ping Wang 0002, Hong-Wen Deng	FISH: fast and accurate diploid genotype imputation via segmental hidden Markov model.	Bioinform.	2014	DBLP DOI BibTeX RDF
24	Lei Zhang 0041, Yu-Fang Pei, Xiaoying Fu, Yong Lin, Yu-Ping Wang 0002, Hong-Wen Deng	FISH: fast and accurate diploid genotype imputation via segmental hidden Markov model.	Bioinform.	2014	DBLP DOI BibTeX RDF
24	Yana Safonova, Anton Bankevich, Pavel A. Pevzner	dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes.	RECOMB	2014	DBLP DOI BibTeX RDF
24	Natasha Pavlovikj, Kevin Begcy, Sairam Behera, Malachy Campbell, Harkamal Walia, Jitender S. Deogun	Comparing and optimizing transcriptome assembly pipeline for diploid wheat.	BCB	2014	DBLP DOI BibTeX RDF
24	Wenteng He, Qingran Kong, Yongqian Shi, Bingteng Xie, Mingxia Jiao, Tianqing Huang, Shimeng Guo, Kui Hu, Zhonghua Liu	Generation and Developmental Characteristics of Porcine Tetraploid Embryos and Tetraploid/diploid Chimeric Embryos.	Genom. Proteom. Bioinform.	2013	DBLP DOI BibTeX RDF
24	Veli Mäkinen, Jani Rahkola	Haploid to diploid alignment for variation calling assessment.	BMC Bioinform.	2013	DBLP DOI BibTeX RDF
24	Jingli Wu, Binbin Liang	A Fast and Accurate Algorithm for Diploid Individual Haplotype Reconstruction.	J. Bioinform. Comput. Biol.	2013	DBLP DOI BibTeX RDF
24	Roeland E. Voorrips, Chris A. Maliepaard	The simulation of meiosis in diploid and tetraploid organisms using various genetic models.	BMC Bioinform.	2012	DBLP DOI BibTeX RDF
24	Shuai Yuan, Zhaohui S. Qin	Read-mapping using personalized diploid reference genome for RNA sequencing data reduced bias for detecting allele-specific expression.	BIBM Workshops	2012	DBLP DOI BibTeX RDF
24	Na Li, Qing-dao-er-ji Ren	The Application of Dominant-Recessive Diploid Codes in MOGA.	CIS	2010	DBLP DOI BibTeX RDF
24	Guoqing Li, Lijia Ma, Chao Song, Zhentao Yang, Xiulan Wang, Hui Huang, Yingrui Li, Ruiqiang Li, Xiuqing Zhang, Huanming Yang, Jian Wang 0065, Jun Wang 0004	The YH database: the first Asian diploid genome database.	Nucleic Acids Res.	2009	DBLP DOI BibTeX RDF
24	D. Mokeddem, Abdelhafid Khellaf	Pareto-optimal solutions for multicriteria optimization of a chemical engineering process using a diploid genetic algorithm.	Int. Trans. Oper. Res.	2008	DBLP DOI BibTeX RDF
24	Dominik Heider, Daniel Kessler, Angelika Barnekow	Watermarking sexually reproducing diploid organisms.	Bioinform.	2008	DBLP DOI BibTeX RDF
24	Diana Garncarz, Stanislaw Cebrat, Dietrich Stauffer, Klaus Blindert	Why are diploid genomes widespread and dominant mutations rare?	Theory Biosci.	2007	DBLP DOI BibTeX RDF
24	Manabu Kominami, Tomoki Hamagami	A new genetic algorithm with diploid chromosomes by using probability decoding for non-stationary function optimization.	SMC	2007	DBLP DOI BibTeX RDF
24	Jifeng Tang, Ben Vosman, Roeland E. Voorrips, C. Gerard van der Linden, Jack A. M. Leunissen	QualitySNP: a pipeline for detecting single nucleotide polymorphisms and insertions/deletions in EST data from diploid and polyploid species.	BMC Bioinform.	2006	DBLP DOI BibTeX RDF
24	M. M. Morin, Bernard M. E. Moret	NetGen: generating phylogenetic networks with diploid hybrids.	Bioinform.	2006	DBLP DOI BibTeX RDF
24	Shengxiang Yang	On the Design of Diploid Genetic Algorithms for Problem Optimization in Dynamic Environments.	IEEE Congress on Evolutionary Computation	2006	DBLP DOI BibTeX RDF
24	Mayada F. Abdul Halim, Abbas F. Abdul-Kader	A New Recombination Scheme for Diploid Genetic Algorithms.	AICCSA	2006	DBLP DOI BibTeX RDF
24	Yiping Zhan, David Kulp	Model-P: a basecalling method for resequencing microarrays of diploid samples.	ECCB/JBI	2005	DBLP DOI BibTeX RDF
24	Mark Cooper, Dean W. Podlich	The E(NK) model: Extending the NK model to incorporate gene-by-environment interactions and epistasis for diploid genomes.	Complex.	2002	DBLP DOI BibTeX RDF
24	Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers	Modeling and Simulating Diploid Simple Genetic Algorithms.	FOGA	2002	DBLP BibTeX RDF
24	Shane Lee	Genetic algorithms, orthogonal arrays and diploid chromosomes		2002	RDF
24	Dan Gusfield	Inference of Haplotypes from Samples of Diploid Populations: Complexity and Algorithms.	J. Comput. Biol.	2001	DBLP DOI BibTeX RDF
24	Dan Gusfield	A Practical Algorithm for Optimal Inference of Haplotypes from Diploid Populations.	ISMB	2000	DBLP BibTeX RDF
24	Buster Greene	Crossover and diploid dominance with deceptive fitness.	CEC	1999	DBLP DOI BibTeX RDF
24	Silvère Massebeuf, Christian Fonteix, Laszlo Nandor Kiss, Ivan Marc, Fernand Pla, K. Zaras	Multicriteria optimization and decision engineering of an extrusion process aided by a diploid genetic algorithm.	CEC	1999	DBLP DOI BibTeX RDF
24	Akira Imada, Keijiro Araki	How Real-valued Random Synapses Evolve Toward Symmetry with Diploid Chromosomes?	NC	1998	DBLP BibTeX RDF
24	F. Greene	Performance of Diploid Dominance with Genetically Synthesized Signal Processing Networks.	ICGA	1997	DBLP BibTeX RDF
24	F. Greene	A New Approach to Diploid/Dominance and Its Effects on Stationary Genetic Search.	Evolutionary Programming	1996	DBLP BibTeX RDF
24	Khim Peow Ng, Kok Cheong Wong	A New Diploid Scheme and Dominance Change Mechanism for Non-Stationary Function Optimization.	ICGA	1995	DBLP BibTeX RDF
24	V. B. Klepikov, K. V. Mahotilo, S. A. Sergeev	Modification of Holland's Reproductive Plan for Diploid Populations.	ICANNGA	1995	DBLP DOI BibTeX RDF
24	Rémy Viennet, Christian Fonteix, Ivan Marc	New Multicriteria Optimization Method Based on the Use of a Diploid Genetic Algorithm: Example of an Industrial Problem.	Artificial Evolution	1995	DBLP DOI BibTeX RDF
24	F. Greene	A Method for Utilizing Diploid/Dominance in Genetic Search.	International Conference on Evolutionary Computation	1994	DBLP DOI BibTeX RDF
19	Alexander Gusev, Ion I. Mandoiu, Bogdan Pasaniuc	Highly Scalable Genotype Phasing by Entropy Minimization.	IEEE ACM Trans. Comput. Biol. Bioinform.	2008	DBLP DOI BibTeX RDF	genotype phasing, algorithm, Single Nucleotide Polymorphism, haplotype
19	Roberto C. Cavalcante Vieira, Creto Augusto Vidal, Joaquim B. Cavalcante Neto	A biologically inspired generation of virtual characters.	SAC	2008	DBLP DOI BibTeX RDF	genetic inheritance, reproductive simulation, virtual characters modeling, mesh generation
19	M-Hossein Moeinzadeh, Ehsan Asgarian, Sara Sharifian-R, Amir Najafi-Ardabili, Javad Mohammadzadeh	Neural Network Based Approaches, Solving Haplotype Reconstruction in MEC and MEC/GI Models.	Asia International Conference on Modelling and Simulation	2008	DBLP DOI BibTeX RDF	biology and genomics, haplotype reconstruction, SNP fragments, genotype information, reconstruction rate, clustering, Bioinformatics, haplotype, unsupervised neural network
19	Stefano Benedettini, Andrea Roli, Luca Di Gaspero	Two-Level ACO for Haplotype Inference Under Pure Parsimony.	ANTS Conference	2008	DBLP DOI BibTeX RDF
19	Mark Daley	On the Processing Power of Protozoa.	CiE	2008	DBLP DOI BibTeX RDF
19	William Beaver, David Kosman, Gary Tedeschi, Ethan Bier, William McGinnis, Yoav Freund	Segmentation of Nuclei on Confocal Image Stacks Using Performance Based Thresholding.	ISBI	2007	DBLP DOI BibTeX RDF
19	Jirí Jaros, Josef Schwarz	Parallel BMDA with probability model migration.	IEEE Congress on Evolutionary Computation	2007	DBLP DOI BibTeX RDF
19	Yinglei Song, Chunmei Liu, Russell L. Malmberg, Liming Cai	Phylogenetic Network Inferences Through Efficient Haplotyping.	WABI	2006	DBLP DOI BibTeX RDF
19	Konstantinos Kalpakis, Parag Namjoshi	Haplotype Phasing Using Semidefinite Programming.	BIBE	2005	DBLP DOI BibTeX RDF
19	Robert Ian Bowers, Emre Sevinç	Preserving Variability in Sexual Multi-agent Systems with Diploidy and Dominance.	ESAW	2005	DBLP DOI BibTeX RDF