Search results for "gene-groups"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
53	Arvind K. Bansal, Christopher Woolverton	Applying Automatically Derived Gene-Groups to Automatically Predict and Refine Metabolic Pathways.	IEEE Trans. Knowl. Data Eng.	2003	DBLP DOI BibTeX RDF	enzymes, gene-groups, microbes, operons, orthologs, pathogenicity, Automation, homologs, drug-discovery, pathway, metabolic pathway, bacteria
34	Kenji Toda, Yoshinobu Uchibori, Toshitsugu Yuba	The Gene Concept and its Implementation for a Dataflow Schemed Parallel Computer.	PARLE (1)	1989	DBLP DOI BibTeX RDF
33	Li-jun Cai, Dong He	Identifying Co-expressed Gene Groups with Significant Functional Categories.	ICIC (3)	2007	DBLP DOI BibTeX RDF	hierarchical clustering method, functional categories, gene expression profile
31	Peng Wei 0005, Wei Pan	Incorporating Gene Functions into Regression Analysis of DNA-Protein Binding Data and Gene Expression Data to Construct Transcriptional Networks.	IEEE ACM Trans. Comput. Biol. Bioinform.	2008	DBLP DOI BibTeX RDF	Shrinkage estimator, Stratified analysis, Microarray, Transcription factor, LASSO
31	Matthias Bernt, Daniel Merkle, Martin Middendorf	Genome Rearrangement Based on Reversals that Preserve Conserved Intervals.	IEEE ACM Trans. Comput. Biol. Bioinform.	2006	DBLP DOI BibTeX RDF	Median problem, reversal operations, conserved intervals, genome rearrangement
31	Na Tang, V. Rao Vemuri	A Web-knowledge-based Clustering Model for Gene Expression Data Analysis.	Advances in Web Intelligence and Data Mining	2006	DBLP DOI BibTeX RDF
31	Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu 0001	Accurate Prediction of Orthologous Gene Groups in Microbes.	CSB	2005	DBLP DOI BibTeX RDF
29	Yutao Ma, Yonghong Peng	Co-expression Gene Discovery from Microarray for Integrative Systems Biology.	ADMA	2006	DBLP DOI BibTeX RDF
28	Ji He, Xinbin Dai, Xuechun Zhao	Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression.	CIBCB	2007	DBLP DOI BibTeX RDF
28	Shihong Mao, Guozhu Dong	Discovery of Highly Differentiative Gene Groups from Microarray Gene Expression Data Using the Gene Club Approach.	J. Bioinform. Comput. Biol.	2005	DBLP DOI BibTeX RDF
28	Shiming Dong, Eileen T. Kraemer	Calculation, Visualization, and Manipulation of MASTs (Maximum Agreement Subtrees).	CSB	2004	DBLP DOI BibTeX RDF
28	Ying Liu 0007, Brian J. Ciliax, Karin Borges, Venu Dasigi, Ashwin Ram 0001, Shamkant B. Navathe, Ray Dingledine	Comparison of Two Schemes for Automatic Keyword Extraction from MEDLINE for Functional Gene Clustering.	CSB	2004	DBLP DOI BibTeX RDF
26	Sun-Yuan Kung, Man-Wai Mak, Ilias Tagkopoulos	Multi-Metric and Multi-Substructure Biclustering Analysis for Gene Expression Data.	CSB	2005	DBLP DOI BibTeX RDF
26	Lu-Yong Wang, Ammaiappan Balasubramanian, Amit Chakraborty, Dorin Comaniciu	Fractal Clustering for Microarray Data Analysis.	CSB Workshops	2005	DBLP DOI BibTeX RDF
26	Ricardo Martínez, Nicolas Pasquier, Claude Pasquier, Lucero Lopez-Perez	Interpreting Microarray Experiments Via Co-expressed Gene Groups Analysis (CGGA).	Discovery Science	2006	DBLP DOI BibTeX RDF
23	Duygu Ucar, Fatih Altiparmak, Hakan Ferhatosmanoglu, Srinivasan Parthasarathy 0001	Mutual Information Based Extrinsic Similarity for Microarray Analysis.	BICoB	2009	DBLP DOI BibTeX RDF
23	Chen-Hsiang Yeang, Tommi S. Jaakkola	Modeling the Combinatorial Functions of Multiple Transcription Factors.	RECOMB	2005	DBLP DOI BibTeX RDF
21	Marek Sikora, Aleksandra Gruca	Induction and selection of the most interesting Gene Ontology based multiattribute rules for descriptions of gene groups.	Pattern Recognit. Lett.	2011	DBLP DOI BibTeX RDF
21	Aleksandra Gruca, Marek Sikora, Andrzej Polanski	RuleGO: a logical rules-based tool for description of gene groups by means of Gene Ontology.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
21	Li-Ching Wu, Jhih-Long Huang, Jorng-Tzong Horng, Hsien-Da Huang	An expert system to identify co-regulated gene groups from time-lagged gene clusters using cell cycle expression data.	Expert Syst. Appl.	2010	DBLP DOI BibTeX RDF
21	Aleksandra Gruca, Michal Kozielski, Marek Sikora	Fuzzy Clustering and Gene Ontology Based Decision Rules for Identification and Description of Gene Groups.	ICMMI	2009	DBLP DOI BibTeX RDF
21	Zuojian Tang, Sieu Phan, Youlian Pan, A. Fazel Famili	Prediction of Co-Regulated Gene Groups through Gene Ontology.	CIBCB	2007	DBLP DOI BibTeX RDF
21	Jinyan Li 0001, Limsoon Wong	Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns .	Bioinform.	2002	DBLP DOI BibTeX RDF
21	Jinyan Li 0001, Limsoon Wong	Identifying good diagnostic gene groups from gene expression profiles using the concept of emerging patterns.	Bioinform.	2002	DBLP DOI BibTeX RDF
18	Ambrose Jong, Chun-Hua Wu, Wensheng Zhou, Han-Min Chen, Sheng-He Huang	Genomic Survey of Cryptococcus neoformans-Induced Gene Expression Profiling in Human Brain Micro-Vascular Endothelial Cells.	FBIT	2007	DBLP DOI BibTeX RDF
18	Stefan Bleuler, Eckart Zitzler	Order Preserving Clustering over Multiple Time Course Experiments.	EvoWorkshops	2005	DBLP DOI BibTeX RDF
18	Hong-Qiang Wang, De-Shuang Huang, Xing-Ming Zhao, Xin Huang	A Novel Clustering Analysis Based on PCA and SOMs for Gene Expression Patterns.	ISNN (2)	2004	DBLP DOI BibTeX RDF
16	Hsien-Da Huang, Huei-Lin Chang, Tsung-Shan Tsou, Baw-Jhiune Liu, Cheng-Yan Kao, Jorng-Tzong Horng	A Data Mining Method to Predict Transcriptional Regulatory Sites Based on Differentially Expressed Genes in Human Genome.	BIBE	2003	DBLP DOI BibTeX RDF	regulatory site, data mining gene expression, transcription factor
16	Arvind K. Bansal, Peer Bork	Applying Logic Programming to Derive Novel Functional Information of Genomes.	PADL	1999	DBLP DOI BibTeX RDF
14	Nawin Najat Mohammed, Chewan Jalal Mohammed	Enhanced Determination of Gene Groups Based on Optimal Kernel PCA with Hierarchical Clustering Algorithm.	CISS	2021	DBLP DOI BibTeX RDF
14	Alok Kumar Shukla	Identification of cancerous gene groups from microarray data by employing adaptive genetic and support vector machine technique.	Comput. Intell.	2020	DBLP DOI BibTeX RDF
14	Mingze He, Kokulapalan Wimalanathan, Peng Liu 0007, Carolyn J. Lawrence-Dill	Compare Expression Profiles for Pre-defined Gene Groups with C-REx.	J. Open Source Softw.	2019	DBLP DOI BibTeX RDF
14	Tun-Wen Pai, Yang-Chun Chang, Cing-Han Yang, Ron-Shan Chen, Rong-Hwa Chen	Functional Simple Sequence Repeat (SSR) Biomarkers for Specific Gene Groups of Oreochromis Niloticus.	ICBBS	2018	DBLP DOI BibTeX RDF
14	Xiaoyong Sun, Jun Li	pairheatmap: Comparing expression profiles of gene groups in heatmaps.	Comput. Methods Programs Biomed.	2013	DBLP DOI BibTeX RDF
14	Grzegorz Zycinski, Margherita Squillario, Annalisa Barla, Tiziana Sanavia, Alessandro Verri, Barbara Di Camillo	Discriminant functional gene groups identification with machine learning and prior knowledge.	ESANN	2012	DBLP BibTeX RDF
14	Kai Kammers, Michel Lang, Jan G. Hengstler, Marcus Schmidt, Jörg Rahnenführer	Survival models with preclustered gene groups as covariates.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
14	Igor Trajkovski, Filip Zelezný, Nada Lavrac, Jakub Tolar	Learning Relational Descriptions of Differentially Expressed Gene Groups.	IEEE Trans. Syst. Man Cybern. Part C	2008	DBLP DOI BibTeX RDF
14	Alexey V. Antonov, Thorsten Schmidt, Yu Wang 0008, Hans-Werner Mewes	ProfCom: a web tool for profiling the complex functionality of gene groups identified from high-throughput data.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
14	Jian-Xin Xu 0001, B. Ashok, Sanjib Kumar Panda, Vladimir B. Bajic	Modeling transcription termination of selected gene groups using support vector machine.	IJCNN	2008	DBLP DOI BibTeX RDF
14	Takeshi Obayashi, Kengo Kinoshita, Kenta Nakai, Masayuki Shibaoka, Shinpei Hayashi, Motoshi Saeki, Daisuke Shibata, Kazuki Saito, Hiroyuki Ohta	ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis.	Nucleic Acids Res.	2007	DBLP DOI BibTeX RDF
14	Alexandre G. de Brevern, Serge A. Hazout, Alain Malpertuy	Influence of microarrays experiments missing values on the stability of gene groups by hierarchical clustering.	BMC Bioinform.	2004	DBLP DOI BibTeX RDF
14	Arvind K. Bansal	Integrating Co-Regulated Gene Groups and Pair-Wise Genome Comparisons to Automate Reconstruction of Microbial Pathways.	BIBE	2001	DBLP DOI BibTeX RDF
13	Xubo Fei, Shiyong Lu, Horia F. Pop, Lily R. Liang	GFBA: A Biclustering Algorithm for Discovering Value-Coherent Biclusters.	ISBRA	2007	DBLP DOI BibTeX RDF
13	Ying Liu 0007, Shamkant B. Navathe, Jorge Civera, Venu Dasigi, Ashwin Ram 0001, Brian J. Ciliax, Ray Dingledine	Text Mining Biomedical Literature for Discovering Gene-to-Gene Relationships: A Comparative Study of Algorithms.	IEEE ACM Trans. Comput. Biol. Bioinform.	2005	DBLP DOI BibTeX RDF	Bond energy algorithm, gene function, cluster analysis, microarray, text analysis, MEDLINE
13	Jinyan Li 0001, Limsoon Wong	Geography of Differences between Two Classes of Data.	PKDD	2002	DBLP DOI BibTeX RDF
8	Minsoo Lee, Yoonkyoung Lee, Boyeon Meang, Okju Choi	A clustering algorithm using particle swarm optimization for DNA chip data analysis.	ICUIMC	2009	DBLP DOI BibTeX RDF	DNA chip, clustering, particle swarm optimization
8	Guozhu Dong, Jinyan Li 0001	Mining border descriptions of emerging patterns from dataset pairs.	Knowl. Inf. Syst.	2005	DBLP DOI BibTeX RDF	Border algorithms, Border descriptions, Minimal/maximal patterns, Changes, Classification rules, Trends, Emerging patterns, Contrasts, Differences
8	Sandy Shaw, Paul Shapshak	Fractal Genomics Modeling: A New Approach to Genomic Analysis and Biomarker Discovery.	CSB	2004	DBLP DOI BibTeX RDF	network theory, HIV infection, bioinformatics, fractals, gene expression, brain, scale-free