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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
Group by:
The graphs summarize 36 occurrences of 35 keywords
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Results
Found 421 publication records. Showing 421 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
62 | Benjarath Phoophakdee, Mohammed J. Zaki |
Genome-scale disk-based suffix tree indexing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SIGMOD Conference ![In: Proceedings of the ACM SIGMOD International Conference on Management of Data, Beijing, China, June 12-14, 2007, pp. 833-844, 2007, ACM, 978-1-59593-686-8. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
disk-based, genome-scale, sequence indexing, suffix tree, external memory |
60 | Xinghua Shi, Rick Stevens |
SWARM: a scientific workflow for supporting bayesian approaches to improve metabolic models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CLADE ![In: 6th International Workshop on Challenges of Large Applications in Distributed Environments, CLADE@HPDC 2008, Boston, MA, USA, June 23, 2008, pp. 25-34, 2008, ACM, 978-1-60558-156-9. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
metabolic models, scientific workflow, bayesian approaches |
55 | José P. Pinto, Oscar Días, Anália Lourenço, Sónia Carneiro, Eugénio C. Ferreira, Isabel Rocha, Miguel Rocha 0001 |
Data Integration Issues in the Reconstruction of the Genome-Scale Metabolic Model of Zymomonas Mobillis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IWPACBB ![In: 2nd International Workshop on Practical Applications of Computational Biology and Bioinformatics, IWPACBB 2008, Salamanca, Spain, 22th-24th October 2008, pp. 92-101, 2008, Springer, 978-3-540-85860-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Genome-scale model reconstruction, Zymomonas mobillis, data integration, data quality |
41 | Yun Zhang 0013, Faisal N. Abu-Khzam, Nicole E. Baldwin, Elissa J. Chesler, Michael A. Langston, Nagiza F. Samatova |
Genome-Scale Computational Approaches to Memory-Intensive Applications in Systems Biology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SC ![In: Proceedings of the ACM/IEEE SC2005 Conference on High Performance Networking and Computing, November 12-18, 2005, Seattle, WA, USA, CD-Rom, pp. 12, 2005, IEEE Computer Society, 1-59593-061-2. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
38 | Marcin Imielinski, Niels Klitgord, Calin Belta |
Investigating the genomic basis of metabolic robustness through in silico flux analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CDC ![In: Proceedings of the 47th IEEE Conference on Decision and Control, CDC 2008, December 9-11, 2008, Cancún, Mexico, pp. 793-798, 2008, IEEE, 978-1-4244-3123-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
38 | Zheng Fu, Xin Chen 0037, Vladimir Vacic, Peng Nan, Yang Zhong, Tao Jiang 0001 |
A Parsimony Approach to Genome-Wide Ortholog Assignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 2-5, 2006, Proceedings, pp. 578-594, 2006, Springer, 3-540-33295-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
37 | Zemin Ning, Mario Cáccamo, James C. Mullikin |
ssahaSNP A Polymorphism Detection Tool on a Whole Genome Scale. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 251-254, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
36 | Xinghua Shi, Rick L. Stevens |
A Bayesian Approach to High-Throughput Biological Model Generation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BICoB ![In: Bioinformatics and Computational Biology, First International Conference, BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings, pp. 376-387, 2009, Springer, 978-3-642-00726-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
31 | Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyle Ellrott, Li Wang 0008, Inna Vokler, Philip F. LoCascio, Dong Xu 0002, Ying Xu 0001 |
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 3rd IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2003), 10-12 March 2003, Bethesda, MD, USA, pp. 3-10, 2003, IEEE Computer Society, 0-7695-1907-5. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
31 | Tao Jiang 0001 |
A Combinatorial Approach to Genome-Wide Ortholog Assignment: Beyond Sequence Similarity Search. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 18th Annual Symposium, CPM 2007, London, Canada, July 9-11, 2007, Proceedings, pp. 1, 2007, Springer, 978-3-540-73436-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
31 | Xin Chen 0037, Jie Zheng 0002, Zheng Fu, Peng Nan, Yang Zhong, Stefano Lonardi, Tao Jiang 0001 |
Assignment of Orthologous Genes via Genome Rearrangement. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 2(4), pp. 302-315, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Ortholog, paralog, reversal, comparative genomics, genome rearrangement, gene duplication |
23 | Meili Chen, Yingke Ma, Song Wu, Xinchang Zheng, Hongen Kang, Jian Sang, Xingjian Xu, Lili Hao, Zhaohua Li, Zheng Gong, Jing-Fa Xiao, Zhang Zhang 0002, Wenming Zhao, Yiming Bao |
Genome Warehouse: A Public Repository Housing Genome-scale Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Genom. Proteom. Bioinform. ![In: Genom. Proteom. Bioinform. 19(4), pp. 584-589, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
23 | Giancarlo Croce |
Towards a genome-scale coevolutionary analysis. (Vers une analyse co-évolutive à l'échelle du génome). ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2019 |
RDF |
|
23 | Risa Kawaguchi, Hisanori Kiryu |
Parallel computation of genome-scale RNA secondary structure to detect structural constraints on human genome. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 17, pp. 203, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
23 | John W. Nicol, Gregg A. Helt, Steven G. Blanchard Jr., Archana Raja, Ann E. Loraine |
The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 25(20), pp. 2730-2731, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
22 | Nagiza F. Samatova, Al Geist, George Ostrouchov, Anatoli V. Melechko |
Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS ![In: 16th International Parallel and Distributed Processing Symposium (IPDPS 2002), 15-19 April 2002, Fort Lauderdale, FL, USA, CD-ROM/Abstracts Proceedings, 2002, IEEE Computer Society, 0-7695-1573-8. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
20 | Margaret J. Eppstein, Paul Haake |
Very large scale ReliefF for genome-wide association analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBCB ![In: Proceedings of the 2008 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2008, Sun Valley Resort, Sun Valley, Idaho, USA, September 15-17, 2008, pp. 112-119, 2008, IEEE, 978-1-4244-1778-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
18 | Adrianto Wirawan, Bertil Schmidt |
Parallel Discovery of Transcription Factor Binding Sites. ![Search on Bibsonomy](Pics/bibsonomy.png) |
APCCAS ![In: IEEE Asia Pacific Conference on Circuits and Systems 2006, APCCAS 2006, Singapore, 4-7 December 2006, pp. 700-703, 2006, IEEE, 1-4244-0387-1. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
17 | Bin Du, Laurence Yang 0001, Colton J. Lloyd, Xin Fang, Bernhard O. Palsson |
Genome-scale model of metabolism and gene expression provides a multi-scale description of acid stress responses in Escherichia coli. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 15(12), 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
16 | Anna V. Anagnostopoulos, Judith A. Blake, Carol J. Bult, Martin Ringwald, Joel E. Richardson, James A. Kadin, Janan T. Eppig |
Using bio-ontologies as data annotation, integration & analytical tools at the Mouse Genome Informatics resource. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Proceedings of the 8th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2008, October 8-10, 2008, Athens, Greece, pp. 1-7, 2008, IEEE, 978-1-4244-2845-8. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
16 | Tsai-Hung Fan, Shufen Lee, Hsueh-I Lu, Tsung-Shan Tsou, Tsai-Cheng Wang, Adam Yao |
An Optimal Algorithm for Maximum-Sum Segment and Its Application in Bioinformatics Extended Abstract. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIAA ![In: Implementation and Application of Automata, 8th International Conference, CIAA 2003, Santa Barbara, California, USA, July 16-18, 2003, Proceedings, pp. 251-257, 2003, Springer, 3-540-40561-5. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
13 | Fernando Cruz, João Capela, Eugénio C. Ferreira, Miguel Rocha 0001, Oscar Días |
BioISO: An Objective-Oriented Application for Assisting the Curation of Genome-Scale Metabolic Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 21(2), pp. 215-226, March - April 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
13 | Patrick E. Gelbach, Handan Cetin, Stacey D. Finley |
Flux sampling in genome-scale metabolic modeling of microbial communities. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 25(1), pp. 45, December 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
13 | Juliette Cooke, Maxime Delmas, Cecilia Wieder, Pablo Rodríguez-Mier, Clément Frainay, Florence Vinson, Timothy M. D. Ebbels, Nathalie Poupin, Fabien Jourdan |
Genome scale metabolic network modelling for metabolic profile predictions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 20(2), February 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
13 | Takeyuki Tamura |
MetNetComp: Database for Minimal and Maximal Gene-Deletion Strategies for Growth-Coupled Production of Genome-Scale Metabolic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 20(6), pp. 3748-3758, November - December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
13 | Feiran Li, Yu Chen, Johan Gustafsson, Hao Wang, Yi Wang, Chong Zhang, Xinhui Xing |
Genome-scale metabolic models applied for human health and biopharmaceutical engineering. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Quant. Biol. ![In: Quant. Biol. 11(4), pp. 363-375, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
13 | Huan Du, Meng Li, Yang Liu |
Towards applications of genome-scale metabolic model-based approaches in designing synthetic microbial communities. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Quant. Biol. ![In: Quant. Biol. 11(1), pp. 15, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
13 | Thummarat Paklao, Apichat Suratanee, Kitiporn Plaimas |
ICON-GEMs: integration of co-expression network in genome-scale metabolic models, shedding light through systems biology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 492, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
13 | Jakob P. Pettersen, Sandra Castillo, Paula Jouhten, Eivind Almaas |
Genome-scale metabolic models reveal determinants of phenotypic differences in non-Saccharomyces yeasts. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 438, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
13 | Enes Fahri Tezcan, Yigit Demirtas, Zeynep Petek Cakar, Kutlu Ö. Ülgen |
Comprehensive genome-scale metabolic model of the human pathogen Cryptococcus neoformans: A platform for understanding pathogen metabolism and identifying new drug targets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Frontiers Bioinform. ![In: Frontiers Bioinform. 3, May 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Maxim Zvyagin, Alexander Brace, Kyle Hippe, Yuntian Deng, Bin Zhang, Cindy Orozco Bohorquez, Austin Clyde, Bharat Kale, Danilo Perez-Rivera, Heng Ma, Carla M. Mann, Michael W. Irvin, Defne G. Ozgulbas, Natalia Vassilieva, J. Gregory Pauloski, Logan T. Ward, Valérie Hayot-Sasson, Murali Emani, Sam Foreman, Zhen Xie, Diangen Lin, Maulik Shukla, Weili Nie, Josh Romero, Christian Dallago, Arash Vahdat, Chaowei Xiao, Thomas Gibbs, Ian T. Foster, James J. Davis 0002, Michael E. Papka, Thomas S. Brettin, Rick Stevens, Anima Anandkumar, Venkatram Vishwanath, Arvind Ramanathan |
GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Int. J. High Perform. Comput. Appl. ![In: Int. J. High Perform. Comput. Appl. 37(6), pp. 683-705, November 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Gaofei Jiang, Jiaxuan Zhang, Yaozhong Zhang, Xinrun Yang, Tingting Li, Ningqi Wang, Xingjian Chen, Fang-Jie Zhao, Zhong Wei, Yangchun Xu, Qirong Shen, Wei Xue |
DCiPatho: deep cross-fusion networks for genome scale identification of pathogens. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 24(4), July 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
13 | Elena Lucy Carter, Chrystala Constantinidou, Mohammad Tauqeer Alam |
Applications of genome-scale metabolic models to investigate microbial metabolic adaptations in response to genetic or environmental perturbations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 25(1), November 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
13 | Alexandru Oarga, Bridget Bannerman, Jorge Júlvez |
CONTRABASS: exploiting flux constraints in genome-scale models for the detection of vulnerabilities. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(2), February 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Pooya Borzou, Jafar Ghaisari, Iman Izadi, Yasin Eshraghi, Yousof Gheisari |
A novel strategy for dynamic modeling of genome-scale interaction networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(2), February 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Lun Ai 0001, Shi-Shun Liang, Wang-Zhou Dai, Liam Hallett, Stephen H. Muggleton, Geoff S. Baldwin |
Human Comprehensible Active Learning of Genome-Scale Metabolic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2308.12740, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Ashka Shah, Arvind Ramanathan, Valérie Hayot-Sasson, Rick Stevens |
Causal Discovery and Optimal Experimental Design for Genome-Scale Biological Network Recovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2304.03210, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Jinyi Qian, Yuzhou Wang, Xiner Liu, Zijian Hu, Nan Xu, Yuetong Wang, Tianqiong Shi, Chao Ye |
Improving acetoin production through construction of a genome-scale metabolic model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 158, pp. 106833, May 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Pritam Kundu, Amit Ghosh |
Genome-scale community modeling for deciphering the inter-microbial metabolic interactions in fungus-farming termite gut microbiome. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 154, pp. 106600, March 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Maxwell Neal, Deepan Thiruppathy, Karsten Zengler |
Genome-scale metabolic modeling of the human gut bacterium Bacteroides fragilis strain 638R. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(10), October 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Diego Tec-Campos, Camila Posadas, Juan D. Tibocha-Bonilla, Deepan Thiruppathy, Nathan Glonek, Cristal Zuñiga, Alejandro Zepeda, Karsten Zengler |
The genome-scale metabolic model for the purple non-sulfur bacterium Rhodopseudomonas palustris Bis A53 accurately predicts phenotypes under chemoheterotrophic, chemoautotrophic, photoheterotrophic, and photoautotrophic growth conditions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(8), 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Tareian A. Cazares, Faiz W. Rizvi, Balaji Iyer, Xiaoting Chen, Michael Kotliar, Anthony T. Bejjani, Joseph A. Wayman, Omer Donmez, Benjamin Wronowski, Sreeja Parameswaran, Leah C. Kottyan, Artem Barski, Matthew T. Weirauch, V. B. Surya Prasath, Emily R. Miraldi |
maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(1), January 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Tyler W. H. Backman, Christina Schenk, Tijana Radivojevic, David Ando, Jahnavi Singh, Jeffrey J. Czajka, Zak Costello, Jay D. Keasling, Yinjie Tang, Elena V. Akhmatskaya, Héctor García Martín |
BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(11), November 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Emanuel Cunha, Miguel Silva, Inês Chaves, Hüseyin Demirci, Davide Lagoa, Diogo Lima, Miguel Rocha 0001, Isabel Rocha, Oscar Días |
The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(9), 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Alina Rekena, Marina J. Pinheiro, Nemailla Bonturi, Isma Belouah, Eliise Tammekivi, Koit Herodes, Eduard J. Kerkhoven, Petri-Jaan Lahtvee |
Genome-scale metabolic modeling reveals metabolic trade-offs associated with lipid production in Rhodotorula toruloides. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(4), 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | William T. Scott Jr., Sara Benito-Vaquerizo, Johannes Zimmermann, Djordje Bajic, Almut Heinken, María Suárez-Diez, Peter J. Schaap |
A structured evaluation of genome-scale constraint-based modeling tools for microbial consortia. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(8), 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Puhua Niu, Maria J. Soto, Shuai Huang 0001, Byung-Jun Yoon, Edward R. Dougherty, Francis J. Alexander, Ian Blaby, Xiaoning Qian |
Sensitivity Analysis of Genome-Scale Metabolic Flux Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 30(7), pp. 751-765, July 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Veli Mäkinen, Djamal Belazzougui, Fabio Cunial, Alexandru I. Tomescu |
Genome-Scale Algorithm Design: Bioinformatics in the Era of High-Throughput Sequencing (2nd edition). ![Search on Bibsonomy](Pics/bibsonomy.png) |
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2023 |
RDF |
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13 | Ashka Shah, Arvind Ramanathan, Valérie Hayot-Sasson, Rick Stevens |
Causal Discovery and Optimal Experimental Design for Genome-Scale Biological Network Recovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PASC ![In: Proceedings of the Platform for Advanced Scientific Computing Conference, PASC 2023, Davos, Switzerland, June 26-28, 2023, pp. 1:1-1:11, 2023, ACM. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Teresa Joven, Jorge Lázaro, Jorge Júlvez |
Modeling Uncertain Biomass Composition in Genome-Scale Metabolic Models with Flexible Nets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
QEST ![In: Quantitative Evaluation of Systems - 20th International Conference, QEST 2023, Antwerp, Belgium, September 20-22, 2023, Proceedings, pp. 148-151, 2023, Springer, 978-3-031-43834-9. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Gautham Dharuman, Arvind Ramanathan |
Protein Generation via Genome-scale Language Models with Bio-physical Scoring. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SC Workshops ![In: Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, Network, Storage, and Analysis, SC-W 2023, Denver, CO, USA, November 12-17, 2023, pp. 95-101, 2023, ACM. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Kowshika Sarker, Ruoqing Zhu, Hannah D. Holscher, ChengXiang Zhai |
Augmenting nutritional metabolomics with a genome-scale metabolic model for assessment of diet intake. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BCB ![In: Proceedings of the 14th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2023, Houston, TX, USA, September 3-6, 2023, pp. 4:1-4:10, 2023, ACM. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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13 | Miria Bernardino, Robert G. Beiko |
Genome-scale prediction of bacterial promoters. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Biosyst. ![In: Biosyst. 221, pp. 104771, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Ying Ji 0002, Rui Chen 0021, Quan Wang 0004, Qiang Wei, Ran Tao, Bingshan Li |
A Bayesian framework to integrate multi-level genome-scale data for Autism risk gene prioritization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 23(1), pp. 146, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Max van 't Hof, Omkar S. Mohite, Jonathan M. Monk, Tilmann Weber, Bernhard O. Palsson, Morten O. A. Sommer |
High-quality genome-scale metabolic network reconstruction of probiotic bacterium Escherichia coli Nissle 1917. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 23(1), pp. 566, December 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Yumeng Zhang, Yangming Zhang, Yi Xiong, Hui Wang, Zixin Deng, Jiangning Song, Hong-Yu Ou |
T4SEfinder: a bioinformatics tool for genome-scale prediction of bacterial type IV secreted effectors using pre-trained protein language model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 23(1), 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Xinxin Peng, Xiaoyu Wang, Yuming Guo, Zongyuan Ge, Fuyi Li, Xin Gao 0001, Jiangning Song |
RBP-TSTL is a two-stage transfer learning framework for genome-scale prediction of RNA-binding proteins. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 23(4), 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Gianvito Pio, Paolo Mignone, Giuseppe Magazzù, Guido Zampieri, Michelangelo Ceci, Claudio Angione |
Integrating genome-scale metabolic modelling and transfer learning for human gene regulatory network reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(2), pp. 487-493, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Rebecca L. Rubinstein, Mikayla A. Borton, Haiyan Zhou, Michael Shaffer, David W. Hoyt, James Stegen, Christopher S. Henry, Kelly C. Wrighton, Roelof Versteeg |
ORT: a workflow linking genome-scale metabolic models with reactive transport codes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(3), pp. 778-784, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Ines Thiele, German A. Preciat Gonzalez, Ronan M. T. Fleming |
MetaboAnnotator: an efficient toolbox to annotate metabolites in genome-scale metabolic reconstructions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(20), pp. 4831-4832, October 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Tadeja Rezen, Alexandre Martins, Miha Mraz, Nikolaj Zimic, Damjana Rozman, Miha Moskon |
Integration of omics data to generate and analyse COVID-19 specific genome-scale metabolic models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 145, pp. 105428, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Abhijit Paul, Salman Azhar, Phonindra Nath Das, Nandadulal Bairagi, Samrat Chatterjee |
Elucidating the metabolic characteristics of pancreatic β-cells from patients with type 2 diabetes (T2D) using a genome-scale metabolic modeling. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 144, pp. 105365, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Tânia Barata, Vítor Vieira, Rúben Rodrigues, Ricardo Pires das Neves, Miguel Rocha 0001 |
Reconstruction of tissue-specific genome-scale metabolic models for human cancer stem cells. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 142, pp. 105177, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Giuseppe Magazzù, Guido Zampieri, Claudio Angione |
Clinical stratification improves the diagnostic accuracy of small omics datasets within machine learning and genome-scale metabolic modelling methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 151(Part), pp. 106244, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Alexandre Oliveira, Emanuel Cunha, Fernando Cruz, João Capela, João Carlos Sequeira, Marta Sampaio, Cláudia Sampaio, Oscar Días |
Systematic assessment of template-based genome-scale metabolic models created with the BiGG Integration Tool. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Integr. Bioinform. ![In: J. Integr. Bioinform. 19(3), 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Maureen A. Carey, Gregory L. Medlock, Michal Stolarczyk, William A. Petri Jr., Jennifer L. Guler, Jason A. Papin |
Comparative analyses of parasites with a comprehensive database of genome-scale metabolic models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 18(2), 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Verónica S. Martínez, Pedro A. Saa, Jason Jooste, Kanupriya Tiwari, Lake-Ee Quek, Lars Keld Nielsen |
The topology of genome-scale metabolic reconstructions unravels independent modules and high network flexibility. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 18(6), 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Nicole Pearcy, Marco Garavaglia, Thomas Millat, James P. Gilbert, Yoseb Song, Hassan Hartman, Craig Woods, Claudio Tomi-Andrino, Rajesh Reddy Bommareddy, Byung-Kwan Cho, David A. Fell, Mark Poolman, John R. King, Klaus Winzer, Jamie Twycross, Nigel P. Minton |
A genome-scale metabolic model of Cupriavidus necator H16 integrated with TraDIS and transcriptomic data reveals metabolic insights for biotechnological applications. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 18(5), 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Matteo N. Amaradio, Giorgio Jansen, Varun Ojha 0001, Jole Costanza, Giuseppe Di Fatta, Giuseppe Nicosia |
Inferring Pathological Metabolic Patterns in Breast Cancer Tissue from Genome-Scale Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
LOD (1) ![In: Machine Learning, Optimization, and Data Science - 8th International Workshop, LOD 2022, Certosa di Pontignano, Italy, September 19-22, 2022, Revised Selected Papers, Part I, pp. 596-612, 2022, Springer, 978-3-031-25598-4. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Kiumars Badr, Q. Peter He, Jin Wang |
Understanding the evolution of interspecies metabolic interactions using dynamic genome-scale metabolic modeling*. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACC ![In: American Control Conference, ACC 2022, Atlanta, GA, USA, June 8-10, 2022, pp. 450-455, 2022, IEEE, 978-1-6654-5196-3. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Yunfeng Shan, Guo Li, Xiu-Qing Li, Robin Gras, Youjun Zhou |
Data-Mining with Three Genome-Scale Approaches Supports that Lungfish is the Closest Living Relative of Land Vertebrate, but not Coelacanth. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSCI ![In: International Conference on Computational Science and Computational Intelligence, CSCI 2022, Las Vegas, NV, USA, December 14-16, 2022, pp. 584-594, 2022, IEEE, 979-8-3503-2028-2. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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13 | Payal Gaggar, Manish Kumar, Kunal Mukhopadhyay |
Genome-Scale Identification, in Silico Characterization and Interaction Study Between Wheat SNARE and NPSN Gene Families Involved in Vesicular Transport. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 18(6), pp. 2492-2501, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Sudip Sharma, Sudhir Kumar 0001 |
Fast and accurate bootstrap confidence limits on genome-scale phylogenies using little bootstraps. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nat. Comput. Sci. ![In: Nat. Comput. Sci. 1(9), pp. 573-577, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Qi Wang, Zhaoqian Liu, Bo Yan, Wen-Chi Chou, Laurence Ettwiller, Qin Ma 0003, Bingqiang Liu |
A novel computational framework for genome-scale alternative transcription units prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 22(6), 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Wei Du 0002, Gaoyang Li, Nicholas Ho, Landon Jenkins, Drew Hockaday, Jiankang Tan, Huansheng Cao |
CyanoPATH: a knowledgebase of genome-scale functional repertoire for toxic cyanobacterial blooms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 22(4), July 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Sisheng Liu, Jinpeng Liu, Yanqi Xie, Tingting Zhai, Eugene W. Hinderer, Arnold J. Stromberg, Nathan L. Vanderford, Jill M. Kolesar, Hunter N. B. Moseley, Li Chen, Chunming Liu, Chi Wang 0003 |
MEScan: a powerful statistical framework for genome-scale mutual exclusivity analysis of cancer mutations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(9), pp. 1189-1197, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Almut Heinken, Stefanía Magnúsdóttir, Ronan M. T. Fleming, Ines Thiele |
DEMETER: efficient simultaneous curation of genome-scale reconstructions guided by experimental data and refined gene annotations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(21), pp. 3974-3975, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Mahim Mahbub, Zahin Wahab, Rezwana Reaz, Mohammad Saifur Rahman, Md. Shamsuzzoha Bayzid |
wQFM: highly accurate genome-scale species tree estimation from weighted quartets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(21), pp. 3734-3743, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Sylwester Swat, Artur Laskowski, Jan Badura, Wojciech Frohmberg, Pawel Wojciechowski, Aleksandra Swiercz, Marta Kasprzak, Jacek Blazewicz |
Genome-scale de novo assembly using ALGA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(12), pp. 1644-1651, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Ewelina Weglarz-Tomczak, Jakub M. Tomczak, Stanley Brul |
M2R: a Python add-on to cobrapy for modifying human genome-scale metabolic reconstruction using the gut microbiota models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2785-2786, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Giuseppe Cattaneo, Umberto Ferraro Petrillo, Raffaele Giancarlo, Francesco Palini, Chiara Romualdi |
The Power of Alignment-Free Histogram-based Functions: a Comprehensive Genome Scale Experimental Analysis - Version 1. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2106.15531, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP BibTeX RDF |
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13 | Leo Zhu, William Pei, Ines Thiele, Radhakrishnan Mahadevan |
Integration of a physiologically-based pharmacokinetic model with a whole-body, organ-resolved genome-scale model for characterization of ethanol and acetaldehyde metabolism. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 17(8), 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Christian Schulz 0011, Tjasa Kumelj, Emil Karlsen, Eivind Almaas |
Genome-scale metabolic modelling when changes in environmental conditions affect biomass composition. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 17(5), 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Piyush Nanda, Amit Ghosh |
Genome Scale-Differential Flux Analysis reveals deregulation of lung cell metabolism on SARS-CoV-2 infection. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 17(4), 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Chaitra Sarathy, Marian Breuer, Martina Kutmon, Michiel E. Adriaens, Chris T. A. Evelo, Ilja C. W. Arts |
Comparison of metabolic states using genome-scale metabolic models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 17(11), 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Sudharshan Ravi, Rudiyanto Gunawan |
ΔFBA - Predicting metabolic flux alterations using genome-scale metabolic models and differential transcriptomic data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 17(11), 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Alexandre Oliveira, Emanuel Cunha, Fernando Cruz, João Capela, João Carlos Sequeira, Marta Sampaio, Oscar Días |
Towards a Multivariate Analysis of Genome-Scale Metabolic Models Derived from the BiGG Models Database. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PACBB ![In: Practical Applications of Computational Biology & Bioinformatics, 15th International Conference (PACBB 2021), Salamanca, Spain, 6-8 October, 2021., pp. 136-144, 2021, Springer, 978-3-030-86257-2. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Miria Bernardino, Robert G. Beiko |
Genome-scale prediction of bacterial promoters. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBCB ![In: IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2021, Melbourne, Australia, October 13-15, 2021, pp. 1-8, 2021, IEEE, 978-1-6654-0112-8. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Mu Gao, Peik Lund-Andersen, Alex Morehead, Sajid Mahmud, Chen Chen, Xiao Chen, Nabin Giri, Raj S. Roy, Farhan Quadir, T. Chad Effler, Ryan Prout, Subil Abraham, Wael R. Elwasif, Nicholas Quentin Haas, Jeffrey Skolnick, Jianlin Cheng, Ada Sedova |
High-Performance Deep Learning Toolbox for Genome-Scale Prediction of Protein Structure and Function. ![Search on Bibsonomy](Pics/bibsonomy.png) |
MLHPC@SC ![In: IEEE/ACM Workshop on Machine Learning in High Performance Computing Environments, MLHPC@SC 2021, St. Louis, MO, USA, November 15, 2021, pp. 46-57, 2021, IEEE, 978-1-6654-1124-0. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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13 | Mojtaba Tefagh, Stephen P. Boyd |
SWIFTCORE: a tool for the context-specific reconstruction of genome-scale metabolic networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 21(1), pp. 140, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Hanen Mhamdi, Jérémie Bourdon, Abdelhalim Larhlimi, Mourad Elloumi |
Bayesian Integrative Modeling of Genome-Scale Metabolic and Regulatory Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Informatics ![In: Informatics 7(1), pp. 1, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Archana Hari, Daniel Lobo |
Fluxer: a web application to compute, analyze and visualize genome-scale metabolic flux networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 48(Webserver-Issue), pp. W427-W435, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Marco Passaro, Martina Martinovic, Valeria Bevilacqua, Elliot A. Hershberg, Grazisa Rossetti, Brian J. Beliveau, Raoul Jean Pierre Bonnal, Massimiliano Pagani |
OligoMinerApp: a web-server application for the design of genome-scale oligonucleotide in situ hybridization probes through the flexible OligoMiner environment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 48(Webserver-Issue), pp. W332-W339, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Charles J. Norsigian, Neha Pusarla, John Luke McConn, James T. Yurkovich, Andreas Dräger, Bernhard O. Palsson, Zachary A. King |
BiGG Models 2020: multi-strain genome-scale models and expansion across the phylogenetic tree. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 48(Database-Issue), pp. D402-D406, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Vittorio Fortino, Giovanni Scala, Dario Greco |
Feature set optimization in biomarker discovery from genome-scale data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(11), pp. 3393-3400, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Martin Scharm, Olaf Wolkenhauer, Mahdi Jalili, Ali Salehzadeh-Yazdi |
GEMtractor: extracting views into genome-scale metabolic models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(10), pp. 3281-3282, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Francisco Guil, José F. Hidalgo, José M. García 0001 |
Boosting the extraction of elementary flux modes in genome-scale metabolic networks using the linear programming approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(14), pp. 4163-4170, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Nikolay Martyushenko, Eivind Almaas |
ErrorTracer: an algorithm for identifying the origins of inconsistencies in genome-scale metabolic models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(5), pp. 1644-1646, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Claude Pasquier, Alain Robichon |
Computational prediction of miRNA/mRNA duplexomes at the whole human genome scale reveals functional subnetworks of interacting genes with embedded miRNA annealing motifs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 88, pp. 107366, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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13 | Andrea Cabbia, Peter A. J. Hilbers, Natal A. W. van Riel |
A Distance-Based Framework for the Characterization of Metabolic Heterogeneity in Large Sets of Genome-Scale Metabolic Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Patterns ![In: Patterns 1(9), pp. 100174, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
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