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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
Group by:
The graphs summarize 439 occurrences of 262 keywords
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Results
Found 2045 publication records. Showing 2045 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
104 | Andrew Wei Xu |
DCJ Median Problems on Linear Multichromosomal Genomes: Graph Representation and Fast Exact Solutions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, International Workshop, RECOMB-CG 2009, Budapest, Hungary, September 27-29, 2009. Proceedings, pp. 70-83, 2009, Springer, 978-3-642-04743-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
104 | Qian Peng, Max A. Alekseyev, Glenn Tesler, Pavel A. Pevzner |
Decoding Synteny Blocks and Large-Scale Duplications in Mammalian and Plant Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 9th International Workshop, WABI 2009, Philadelphia, PA, USA, September 12-13, 2009. Proceedings, pp. 220-232, 2009, Springer, 978-3-642-04240-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
82 | Daniel B. Goodman, Noah Ollikainen, Chris Sholley |
Baculovirus Phylogeny Based on Genome Rearrangements. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, RECOMB 2007 International Workshop, RECOMB-CG 2007, San Diego, CA, USA, September 16-18, 2007, Proceedings, pp. 69-82, 2007, Springer, 978-3-540-74959-2. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
79 | David Haussler |
Computing how we became human. ![Search on Bibsonomy](Pics/bibsonomy.png) |
STOC ![In: Proceedings of the 40th Annual ACM Symposium on Theory of Computing, Victoria, British Columbia, Canada, May 17-20, 2008, pp. 639-640, 2008, ACM, 978-1-60558-047-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
mammalian evolution, transposons, selection, genomes |
77 | Sébastien Angibaud, Guillaume Fertin, Irena Rusu |
On the Approximability of Comparing Genomes with Duplicates. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WALCOM ![In: WALCOM: Algorithms and Computation, Second International Workshop, WALCOM 2008, Dhaka, Bangladesh, February 7-8, 2008., pp. 34-45, 2008, Springer, 978-3-540-77890-5. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
conserved intervals, genome rearrangement, duplicates, breakpoints, adjacencies, common intervals, APX-Hardness |
77 | Guilherme P. Telles, Marcelo M. Brigido, Nalvo F. Almeida, Carlos Juliano M. Viana, Daniel A. S. Anjos, Maria Emília Telles Walter |
A Method for Comparing Three Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology, Brazilian Symposium on Bioinformatics, BSB 2005, Sao Leopoldo, Brazil, July 27-29, 2005, Proceedings, pp. 160-169, 2005, Springer, 3-540-28008-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
68 | Guillaume Blin, Guillaume Fertin, Florian Sikora, Stéphane Vialette |
The ExemplarBreakpointDistancefor Non-trivial Genomes Cannot Be Approximated. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WALCOM ![In: WALCOM: Algorithms and Computation, Third International Workshop, WALCOM 2009, Kolkata, India, February 18-20, 2009. Proceedings, pp. 357-368, 2009, Springer, 978-3-642-00201-4. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
68 | João Delgado, Inês Lynce, Vasco M. Manquinho |
Computing the Summed Adjacency Disruption Number between Two Genomes with Duplicate Genes Using Pseudo-Boolean Optimization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, International Workshop, RECOMB-CG 2009, Budapest, Hungary, September 27-29, 2009. Proceedings, pp. 138-149, 2009, Springer, 978-3-642-04743-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
64 | Guylaine Poisson, Mahdi Belcaid, Anne Bergeron |
Comparative Genomics and Extensive Recombinations in Phage Communities. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, International Workshop, RECOMB-CG 2009, Budapest, Hungary, September 27-29, 2009. Proceedings, pp. 205-216, 2009, Springer, 978-3-642-04743-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
64 | Minh Duc Cao, Lloyd Allison, Trevor I. Dix |
A Distance Measure for Genome Phylogenetic Analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Australasian Conference on Artificial Intelligence ![In: AI 2009: Advances in Artificial Intelligence, 22nd Australasian Joint Conference, Melbourne, Australia, December 1-4, 2009. Proceedings, pp. 71-80, 2009, Springer, 978-3-642-10438-1. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
59 | Zhixiang Chen 0001, Richard H. Fowler, Bin Fu, Binhai Zhu |
On the inapproximability of the exemplar conserved interval distance problem of genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comb. Optim. ![In: J. Comb. Optim. 15(2), pp. 201-221, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Exemplar conserved interval distance, Weak approximation, Approximation algorithm, Genome rearrangement, Inapproximability |
59 | Ben Hutt, Kevin Warwick |
Synapsing Variable-Length Crossover: Meaningful Crossover for Variable-Length Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Evol. Comput. ![In: IEEE Trans. Evol. Comput. 11(1), pp. 118-131, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
59 | Guillaume Blin, Cédric Chauve, Guillaume Fertin, Romeo Rizzi, Stéphane Vialette |
Comparing Genomes with Duplications: A Computational Complexity Point of View. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(4), pp. 523-534, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
maximum adjacency disruption number, summed adjacency disruption number, computational complexity, Comparative genomics, common intervals |
59 | Max A. Alekseyev |
Multi-break Rearrangements: From Circular to Linear Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, RECOMB 2007 International Workshop, RECOMB-CG 2007, San Diego, CA, USA, September 16-18, 2007, Proceedings, pp. 1-15, 2007, Springer, 978-3-540-74959-2. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
59 | Hee-Jeong Jin, Hwan-Gue Cho |
Hierarchical alignment graph for gene teams finding on whole genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2007 ACM Symposium on Applied Computing (SAC), Seoul, Korea, March 11-15, 2007, pp. 113-117, 2007, ACM, 1-59593-480-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
gene team, synteny block, whole genome, bioinformatics, hierarchical clustering |
59 | Éric Gaul, Mathieu Blanchette |
Ordering Partially Assembled Genomes Using Gene Arrangements. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comparative Genomics ![In: Comparative Genomics, RECOMB 2006 International Workshop, RCG 2006, Montreal, Canada, September 24-26, 2006, Proceedings, pp. 113-128, 2006, Springer, 3-540-44529-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
gene order, breakpoint graph, genome assembly, Genome rearrangement |
59 | Akshay Vashist, Casimir A. Kulikowski, Ilya B. Muchnik |
Protein Function Annotation Based on Ortholog Clusters Extracted from Incomplete Genomes Using Combinatorial Optimization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 2-5, 2006, Proceedings, pp. 99-113, 2006, Springer, 3-540-33295-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
59 | Sunshin Kim, Kwang Su Jung, Keun Ho Ryu |
Automatic Orthologous-Protein-Clustering from Multiple Complete-Genomes by the Best Reciprocal BLAST Hits. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BioDM ![In: Data Mining for Biomedical Applications, PAKDD 2006 Workshop, BioDM 2006, Singapore, April 9, 2006, Proceedings, pp. 60-70, 2006, Springer, 3-540-33104-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
59 | Ben Hutt, Kevin Warwick |
Synapsing Variable Length Crossover: An Algorithm for Crossing and Comparing Variable Length Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ECAL ![In: Advances in Artificial Life, 8th European Conference, ECAL 2005, Canterbury, UK, September 5-9, 2005, Proceedings, pp. 926-935, 2005, Springer, 3-540-28848-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
59 | Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fangfang Pan, Liming Cai |
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005, pp. 223-234, 2005, IEEE Computer Society, 0-7695-2344-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
RNA secondary structure profiling, Pseudo-knot search, Covariance model, Tree decomposition |
59 | Joel V. Earnest-DeYoung, Emmanuelle Lerat, Bernard M. E. Moret |
Reversing Gene Erosion - Reconstructing Ancestral Bacterial Genomes from Gene-Content and Order Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 4th International Workshop, WABI 2004, Bergen, Norway, September 17-21, 2004, Proceedings, pp. 1-13, 2004, Springer, 3-540-23018-1. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
55 | Winnie W. M. Lam, Keith C. C. Chan, David K. Y. Chiu, Andrew K. C. Wong |
MAGMA: An Algorithm for Mining Multi-level Patterns in Genomic Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007, Silicon Valley, CA, USA, November 2-4, 2007, pp. 89-94, 2007, IEEE Computer Society, 0-7695-3031-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
55 | Guillaume Blin, Annie Chateau, Cédric Chauve, Yannick Gingras |
Inferring Positional Homologs with Common Intervals of Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comparative Genomics ![In: Comparative Genomics, RECOMB 2006 International Workshop, RCG 2006, Montreal, Canada, September 24-26, 2006, Proceedings, pp. 24-38, 2006, Springer, 3-540-44529-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
55 | Kwangmin Choi, Jeong-Hyeon Choi, Amit Saple, Zhiping Wang, Jason Lee, Sun Kim |
PLATCOM: a Platform for Computational Comparative Genomics on the Web. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 27-30, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
55 | David A. Lee, Alastair Grant, Ian Sillitoe, Mark Dibley, Juan Garcia Ranea, Christine A. Orengo |
A structural perspective on genome evolution. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 336, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
50 | Benjamin G. Jackson, Patrick S. Schnable, Srinivas Aluru |
Assembly of Large Genomes from Paired Short Reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BICoB ![In: Bioinformatics and Computational Biology, First International Conference, BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings, pp. 30-43, 2009, Springer, 978-3-642-00726-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
50 | Gunnar Tufte |
Discovery and Investigation of Inherent Scalability in Developmental Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICES ![In: Evolvable Systems: From Biology to Hardware, 8th International Conference, ICES 2008, Prague, Czech Republic, September 21-24, 2008. Proceedings, pp. 189-200, 2008, Springer, 978-3-540-85856-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
50 | Sébastien Angibaud, Guillaume Fertin, Irena Rusu, Annelyse Thévenin, Stéphane Vialette |
A Pseudo-boolean Programming Approach for Computing the Breakpoint Distance Between Two Genomes with Duplicate Genes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, RECOMB 2007 International Workshop, RECOMB-CG 2007, San Diego, CA, USA, September 16-18, 2007, Proceedings, pp. 16-29, 2007, Springer, 978-3-540-74959-2. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
breakpoint distance, heuristic, genome rearrangement, duplication, pseudo-boolean programming |
50 | Daniel A. S. Anjos, Gustavo G. Zerlotini, Guilherme A. Pinto, Maria Emília Telles Walter, Marcelo M. Brigido, Guilherme P. Telles, Carlos Juliano M. Viana, Nalvo F. Almeida |
A Method for Inferring Biological Functions Using Homologous Genes Among Three Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology, Second Brazilian Symposium on Bioinformatics, BSB 2007, Angra dos Reis, Brazil, August 29-31, 2007, Proceedings, pp. 69-80, 2007, Springer, 978-3-540-73730-8. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
50 | Nirmal Ranganathan, Cédric Feschotte, David Levine |
Cluster and Grid Based Classification of Transposable Elements in Eukaryotic Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CCGRID ![In: Sixth IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2006), 16-19 May 2006, Singapore, pp. 45, 2006, IEEE Computer Society, 0-7695-2585-7. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
In cluster, transposable elements, bioinformatics, distributed workflow |
50 | Zhixiang Chen 0001, Richard H. Fowler, Bin Fu, Binhai Zhu |
Lower Bounds on the Approximation of the Exemplar Conserved Interval Distance Problem of Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
COCOON ![In: Computing and Combinatorics, 12th Annual International Conference, COCOON 2006, Taipei, Taiwan, August 15-18, 2006, Proceedings, pp. 245-254, 2006, Springer, 3-540-36925-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
50 | Chang-Heng Chang, Li-Ching Hsieh, Ta-Yuan Chen, Hong-Da Chen, Liaofu Luo, Hoong-Chien Lee |
Shannon Information in Complete Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 20-30, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
50 | Nalvo F. Almeida Jr., Carlos E. R. Alves, Edson Cáceres, Siang W. Song |
Comparison of Genomes Using High-Performance Parallel Computing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SBAC-PAD ![In: 15th Symposium on Computer Architecture and High Performance Computing (SBAC-PAD 2003), 10-12 November 2003, Sao Paulo, Brazil, pp. 142-148, 2003, IEEE Computer Society, 0-7695-2046-4. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
50 | Li-San Wang, Tandy J. Warnow |
Estimating true evolutionary distances between genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
STOC ![In: Proceedings on 33rd Annual ACM Symposium on Theory of Computing, July 6-8, 2001, Heraklion, Crete, Greece, pp. 637-646, 2001, ACM, 1-58113-349-9. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
50 | Li-San Wang |
Exact-IEBP: A New Technique for Estimating Evolutionary Distances between Whole Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, First International Workshop, WABI 2001, Aarhus, Denmark, August 28-31, 2001, Proceedings, pp. 175-188, 2001, Springer, 3-540-42516-0. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
46 | Ramiro Garza-Domínguez, Antonio Quiroz-Gutiérrez |
Analysis of DNA-Dimer Distribution in Retroviral Genomes Using a Bayesian Networks Induction Technique Based on Genetic Algorithms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
MICAI ![In: MICAI 2007: Advances in Artificial Intelligence, 6th Mexican International Conference on Artificial Intelligence, Aguascalientes, Mexico, November 4-10, 2007, Proceedings, pp. 1122-1131, 2007, Springer, 978-3-540-76630-8. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Retroviral Genomes, DNA-dimer, Bayesian Networks, Bioinformatics, Fuzzy Sets |
46 | Max A. Alekseyev, Pavel A. Pevzner |
Whole genome duplications, multi-break rearrangements, and genome halving problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SODA ![In: Proceedings of the Eighteenth Annual ACM-SIAM Symposium on Discrete Algorithms, SODA 2007, New Orleans, Louisiana, USA, January 7-9, 2007, pp. 665-679, 2007, SIAM, 978-0-898716-24-5. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP BibTeX RDF |
|
46 | Sun Kim, Ankita Bhan, Bharath K. Maryada, Kwangmin Choi, Yves V. Brun |
EGGS: Extraction of Gene Clusters Using Genome Context Based Sequence Matching Techniques. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007, Silicon Valley, CA, USA, November 2-4, 2007, pp. 23-28, 2007, IEEE Computer Society, 0-7695-3031-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
46 | Stanislav Angelov, Boulos Harb, Sampath Kannan, Sanjeev Khanna, Junhyong Kim |
Efficient Enumeration of Phylogenetically Informative Substrings. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 2-5, 2006, Proceedings, pp. 248-264, 2006, Springer, 3-540-33295-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
46 | Laxmi Parida |
Gapped Permutation Patterns for Comparative Genomics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 6th International Workshop, WABI 2006, Zurich, Switzerland, September 11-13, 2006, Proceedings, pp. 376-387, 2006, Springer, 3-540-39583-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
permutation patterns, whole genome analysis, evolutionary analysis, data mining, clusters, patterns, Pattern discovery, comparative genomics, motifs, labeled trees |
46 | Jijun Tang, Bernard M. E. Moret, Liying Cui, Claude W. dePamphilis |
Phylogenetic Reconstruction from Arbitrary Gene-Order Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 19-21 March 2004, Taichung, Taiwan, pp. 592-599, 2004, IEEE Computer Society, 0-7695-2173-8. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
46 | Thomas Schmidt 0001, Jens Stoye |
Quadratic Time Algorithms for Finding Common Intervals in Two and More Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 15th Annual Symposium, CPM 2004, Istanbul,Turkey, July 5-7, 2004, Proceedings, pp. 347-358, 2004, Springer, 3-540-22341-X. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
46 | Dannie Durand, David Sankoff |
Tests for gene clustering. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sixth Annual International Conference on Computational Biology, RECOMB 2002, Washington, DC, USA, April 18-21, 2002, pp. 144-154, 2002, ACM, 1-58113-498-3. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
44 | Guoliang Li 0002, Jian Ma 0004, Louxin Zhang |
Selecting Genomes for Reconstruction of Ancestral Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, RECOMB 2007 International Workshop, RECOMB-CG 2007, San Diego, CA, USA, September 16-18, 2007, Proceedings, pp. 110-121, 2007, Springer, 978-3-540-74959-2. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
42 | Tamir Tuller, Hadas Birin, Martin Kupiec, Eytan Ruppin |
Co-evolutionary Models for Reconstructing Ancestral Genomic Sequences: Computational Issues and Biological Examples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, International Workshop, RECOMB-CG 2009, Budapest, Hungary, September 27-29, 2009. Proceedings, pp. 164-180, 2009, Springer, 978-3-642-04743-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
reconstruction of ancestral genomes, maximum likelihood, Co-evolution, maximum parsimony |
40 | Sara Nasser, Adrienne Breland, Frederick C. Harris Jr., Monica N. Nicolescu, Gregory Vert |
Fuzzy Genome Sequence Assembly for Single and Environmental Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Fuzzy Systems in Bioinformatics and Computational Biology ![In: Fuzzy Systems in Bioinformatics and Computational Biology, pp. 19-44, 2009, Springer, 978-3-540-89967-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
40 | Sébastien Angibaud, Guillaume Fertin, Annelyse Thévenin, Stéphane Vialette |
Pseudo Boolean Programming for Partially Ordered Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, International Workshop, RECOMB-CG 2009, Budapest, Hungary, September 27-29, 2009. Proceedings, pp. 126-137, 2009, Springer, 978-3-642-04743-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
40 | Sébastien Angibaud, Damien Eveillard, Guillaume Fertin, Irena Rusu |
Comparing Bacterial Genomes by Searching Their Common Intervals. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BICoB ![In: Bioinformatics and Computational Biology, First International Conference, BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings, pp. 102-113, 2009, Springer, 978-3-642-00726-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
circular genome, comparative genomic, common interval |
40 | Allison Regier, Michael Olson, Scott J. Emrich |
Alignment and Analysis of Closely Related Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BICoB ![In: Bioinformatics and Computational Biology, First International Conference, BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings, pp. 343-352, 2009, Springer, 978-3-642-00726-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
40 | Krister M. Swenson, Mark Marron, Joel V. Earnest-DeYoung, Bernard M. E. Moret |
Approximating the true evolutionary distance between two genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACM J. Exp. Algorithmics ![In: ACM J. Exp. Algorithmics 12, pp. 3.5:1-3.5:17, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
pairwise distances, whole-genome data, Evolution, inversions, duplications |
40 | Dongsheng Che, Guojun Li, Shane T. Jensen, Jun S. Liu, Ying Xu 0001 |
PFP: A Computational Framework for Phylogenetic Footprinting in Prokaryotic Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings, pp. 110-121, 2008, Springer, 978-3-540-79449-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
40 | Zhixiang Chen 0001, Bin Fu, Jinhui Xu 0001, Bo-Ting Yang, Zhiyu Zhao, Binhai Zhu |
Non-breaking Similarity of Genomes with Gene Repetitions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 18th Annual Symposium, CPM 2007, London, Canada, July 9-11, 2007, Proceedings, pp. 119-130, 2007, Springer, 978-3-540-73436-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
40 | Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu 0001 |
An Algorithm for Hierarchical Classification of Genes of Prokaryotic Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings, pp. 551-563, 2007, Springer, 978-3-540-72030-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
40 | Cédric Chauve, Guillaume Fertin, Romeo Rizzi, Stéphane Vialette |
Genomes Containing Duplicates Are Hard to Compare. ![Search on Bibsonomy](Pics/bibsonomy.png) |
International Conference on Computational Science (2) ![In: Computational Science - ICCS 2006, 6th International Conference, Reading, UK, May 28-31, 2006, Proceedings, Part II, pp. 783-790, 2006, Springer, 3-540-34381-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
40 | Enno Ohlebusch, Mohamed Ibrahim Abouelhoda, Kathrin Hockel, Jan Stallkamp |
The Median Problem for the Reversal Distance in Circular Bacterial Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 16th Annual Symposium, CPM 2005, Jeju Island, Korea, June 19-22, 2005, Proceedings, pp. 116-127, 2005, Springer, 3-540-26201-6. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
40 | Akshay Vashist, Casimir A. Kulikowski, Ilya B. Muchnik |
Automatic Protein Function Annotation through Candidate Ortholog Clusters from Incomplete Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 73-74, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
40 | Pak Chung Wong, Kwong-kwok Wong, Harlan Foote, James J. Thomas |
Global Visualization and Alignments of Whole Bacterial Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Vis. Comput. Graph. ![In: IEEE Trans. Vis. Comput. Graph. 9(3), pp. 361-377, 2003. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
whole genome alignment, fractal curve, gestalt psychology, Visualization, bioinformatics, digital image processing |
40 | David Haussler |
Computational analysis of the human and other mammalian genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sventh Annual International Conference on Computational Biology, RECOMB 2003, Berlin, Germany, April 10-13, 2003, pp. 138-138, 2003, ACM, 1-58113-635-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
40 | B. Franz Lang |
Comparative analysis of organelle genomes, a biologist's view of computational challenges (abstract only). ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fifth Annual International Conference on Computational Biology, RECOMB 2001, Montréal, Québec, Canada, April 22-25, 2001, pp. 203, 2001, ACM, 1-58113-353-7. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
40 | Arvind K. Bansal, Peer Bork |
Applying Logic Programming to Derive Novel Functional Information of Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PADL ![In: Practical Aspects of Declarative Languages, First International Workshop, PADL '99, San Antonio, Texas, USA, January 18-19, 1999, Proceedings, pp. 275-289, 1999, Springer, 3-540-65527-1. The full citation details ...](Pics/full.jpeg) |
1999 |
DBLP DOI BibTeX RDF |
|
39 | Yasmine Mansour |
Investigating the impact of repetitive DNA on genome dynamics : Towards a focus on mosquito genomes. (Étude de l'impact des répétitions d'ADN sur la dynamique des génomes : Vers un focus sur les génomes de moustiques). ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2021 |
RDF |
|
39 | Raluca Uricaru |
Algorithms for genome comparison applied to bacterial genomes. (Algorithmes de comparaison de génomes appliqués aux génomes bactériens). ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2010 |
RDF |
|
37 | O. V. Kel, A. G. Romachenko, Alexander E. Kel, Andrey N. Naumochkin, Nikolay A. Kolchanov |
Data representation in the TRRD-a database of transcription regulatory regions of the eukaryotic genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 42-51, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
TRRD, transcription regulatory regions, eukaryotic genomes, TRRD database, structural functional organization, protein factors, transcription signals, eukaryotic genome, EMBL, EPD, TFD, TRANSFAC, human glycoprotein hormone gene, database, data structures, database management systems, medical information systems, genetics, biology computing, data representation, transcription regulation |
37 | Aïda Ouangraoua, Frédéric Boyer, Andrew W. McPherson, Eric Tannier, Cédric Chauve |
Prediction of Contiguous Regions in the Amniote Ancestral Genome. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, 5th International Symposium, ISBRA 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings, pp. 173-185, 2009, Springer, 978-3-642-01550-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
37 | Ho-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Prudence W. H. Wong, Siu-Ming Yiu |
Non-overlapping Common Substrings Allowing Mutations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Math. Comput. Sci. ![In: Math. Comput. Sci. 1(4), pp. 543-555, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Whole genome alignment, conserved genes, algorithms, mutations |
37 | Meng Zhang 0006, William Arndt, Jijun Tang |
A Branch-and-Bound Method for the Multichromosomal Reversal Median Problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 8th International Workshop, WABI 2008, Karlsruhe, Germany, September 15-19, 2008. Proceedings, pp. 14-24, 2008, Springer, 978-3-540-87360-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
37 | Xinghuo Zeng, Matthew J. Nesbitt, Jian Pei, Ke Wang 0001, Ismael A. Vergara, Nansheng Chen |
OrthoCluster: a new tool for mining synteny blocks and applications in comparative genomics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EDBT ![In: EDBT 2008, 11th International Conference on Extending Database Technology, Nantes, France, March 25-29, 2008, Proceedings, pp. 656-667, 2008, ACM, 978-1-59593-926-5. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
37 | Akshay Vashist, Casimir A. Kulikowski, Ilya B. Muchnik |
Ortholog Clustering on a Multipartite Graph. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(1), pp. 17-27, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
clustering algorithms, genetics, biology, Graph-theoretic methods |
37 | Chunfang Zheng, Qian Zhu 0002, David Sankoff |
Parts of the Problem of Polyploids in Rearrangement Phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, RECOMB 2007 International Workshop, RECOMB-CG 2007, San Diego, CA, USA, September 16-18, 2007, Proceedings, pp. 162-176, 2007, Springer, 978-3-540-74959-2. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
37 | Kwangmin Choi, Amit Saple, Sun Kim |
Genome Data Type: a Vehicle to Deliver a Genome Comparison System on the Web. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICDM Workshops ![In: Workshops Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 18-22 December 2006, Hong Kong, China, pp. 142-146, 2006, IEEE Computer Society, 0-7695-2702-7. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
37 | Roger A. Craig, Li Liao |
Protein classification using transductive learning on phylogenetic profiles. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2006 ACM Symposium on Applied Computing (SAC), Dijon, France, April 23-27, 2006, pp. 161-166, 2006, ACM, 1-59593-108-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
37 | Tae-Kyung Kim, Kyoung-Ran Kim, Sang-Keun Oh, Jong-Hak Lee, Wan-Sup Cho |
A Hybrid Grid and Its Application to Orthologous Groups Clustering. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CompLife ![In: Computational Life Sciences II, Second International Symposium, CompLife 2006, Cambridge, UK, September 27-29, 2006, Proceedings, pp. 11-20, 2006, Springer, 3-540-45767-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
37 | Alexander L. Tatuzov, Alexis A. Tatuzov |
Neural Network Modeling of Species Evolution: Loss and Gain in Complete Genome. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IJCNN ![In: Proceedings of the International Joint Conference on Neural Networks, IJCNN 2006, part of the IEEE World Congress on Computational Intelligence, WCCI 2006, Vancouver, BC, Canada, 16-21 July 2006, pp. 3836-3842, 2006, IEEE, 0-7803-9490-9. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
37 | Gad M. Landau, Laxmi Parida, Oren Weimann |
Using PQ Trees for Comparative Genomics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 16th Annual Symposium, CPM 2005, Jeju Island, Korea, June 19-22, 2005, Proceedings, pp. 128-143, 2005, Springer, 3-540-26201-6. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
permutation patterns, PQ trees, whole genome analysis, evolutionary analysis, data mining, clusters, patterns, Pattern discovery, comparative genomics, motifs |
37 | Akshay Vashist, Casimir A. Kulikowski, Ilya B. Muchnik |
Screening for Ortholog Clusters Using Multipartite Graph Clustering by Quasi-Concave Set Function Optimization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RSFDGrC (2) ![In: Rough Sets, Fuzzy Sets, Data Mining, and Granular Computing, 10th International Conference, RSFDGrC 2005, Regina, Canada, August 31 - September 3, 2005, Proceedings, Part II, pp. 409-419, 2005, Springer, 3-540-28660-8. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
37 | Sun Kim, Jeong-Hyeon Choi, Jiong Yang |
Gene Teams with Relaxed Proximity Constraint. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005, pp. 44-55, 2005, IEEE Computer Society, 0-7695-2344-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
37 | Akshay Vashist, Casimir A. Kulikowski, Ilya B. Muchnik |
Ortholog Clustering on a Multipartite Graph. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 5th International Workshop, WABI 2005, Mallorca, Spain, October 3-6, 2005, Proceedings, pp. 328-340, 2005, Springer, 3-540-29008-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
37 | Xin He, Michael H. Goldwasser |
Identifying conserved gene clusters in the presence of orthologous groups. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 272-280, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
clusters of orthologous genes, conserved gene clusters, gene teams, bioinformatics, comparative genomics |
37 | Ross Lippert, Xiaoyue Zhao, Liliana Florea, Clark M. Mobarry, Sorin Istrail |
Finding anchors for genomic sequence comparison. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 233-241, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
MUMs, whole-genome alignments, suffix trees |
37 | Mark Daley, Ian McQuillan |
Viral Gene Compression: Complexity and Verification. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIAA ![In: Implementation and Application of Automata, 9th International Conference, CIAA 2004, Kingston, Canada, July 22-24, 2004, Revised Selected Papers, pp. 102-112, 2004, Springer, 3-540-24318-6. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
37 | Yinhe Cao, Wen-wen Tung, Jianbo Gao |
Recurrence Time Statistics: Versatile Tools for Genomic DNA Sequence Analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 40-51, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
37 | Jijun Tang, Bernard M. E. Moret |
Phylogenetic Reconstruction from Gene-Rearrangement Data with Unequal Gene Content. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WADS ![In: Algorithms and Data Structures, 8th International Workshop, WADS 2003, Ottawa, Ontario, Canada, July 30 - August 1, 2003, Proceedings, pp. 37-46, 2003, Springer, 3-540-40545-3. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
gene-order data, whole-genome data, Hannenhalli-Pevzner theory, inversion distance, reversal distance, experimental assessment, lower bounds, Computational biology, edit distance, gene duplications, phylogenetic reconstruction, signed permutations |
37 | Mihai Pop, Steven Salzberg, Martin Shumway |
Genome Sequence Assembly: Algorithms and Issues. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Computer ![In: Computer 35(7), pp. 47-54, 2002. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
37 | David Sankoff, David Bryant, Mélanie Deneault, B. Franz Lang, Gertraud Burger |
Early eukaryote evolution based on mitochondrial gene order breakpoints. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, RECOMB 2000, Tokyo, Japan, April 8-11, 2000, pp. 254-262, 2000, ACM, 1-58113-186-0. The full citation details ...](Pics/full.jpeg) |
2000 |
DBLP DOI BibTeX RDF |
|
33 | Abdoulaye Baniré Diallo, Vladimir Makarenkov, Mathieu Blanchette |
Finding Maximum Likelihood Indel Scenarios. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comparative Genomics ![In: Comparative Genomics, RECOMB 2006 International Workshop, RCG 2006, Montreal, Canada, September 24-26, 2006, Proceedings, pp. 171-185, 2006, Springer, 3-540-44529-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
Ancestral genome reconstruction, Insertions and deletions, Tree-HMM, Ancestral mammalian genomes |
33 | Lucian Ilie, Liviu Tinta, Cristian Popescu, Kathleen A. Hill |
Viral Genome Compression. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DNA ![In: DNA Computing, 12th International Meeting on DNA Computing, DNA12, Seoul, Korea, June 5-9, 2006, Revised Selected Papers, pp. 111-126, 2006, Springer, 3-540-49024-8. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
viral genomes, genome compression, overlapping genes, shortest common superstring problem, lower bounds, exact algorithms, viruses, approximate solutions |
33 | Elizabeth Shoop, Ed Huai-hsin Chi, John V. Carlis, Paul Bieganski, John Riedl, Neal Dalton, Thomas Newman, Ernest Retzel |
Implementation and testing of an automated EST processing and similarity analysis system. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 52-61, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
automated EST processing, similarity analysis system, expressed sequence tag sequencing projects, putative function, public databases, database technology, automated sequencing technologies, sequencing machine, database management systems, DNA, genomes, medical information systems, genetics, biology computing, system testing, genes, similarity analysis |
31 | Adriana Muñoz, David Sankoff |
Rearrangement Phylogeny of Genomes in Contig Form. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, 5th International Symposium, ISBRA 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings, pp. 160-172, 2009, Springer, 978-3-642-01550-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
31 | Crystal L. Kahn, Shay Mozes, Benjamin J. Raphael |
Efficient Algorithms for Analyzing Segmental Duplications, Deletions, and Inversions in Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 9th International Workshop, WABI 2009, Philadelphia, PA, USA, September 12-13, 2009. Proceedings, pp. 169-180, 2009, Springer, 978-3-642-04240-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
31 | Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Selen Uguroglu, Eric P. Xing |
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 12th Annual International Conference, RECOMB 2008, Singapore, March 30 - April 2, 2008. Proceedings, pp. 66-81, 2008, Springer, 978-3-540-78838-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
31 | Mugdha Khaladkar, Jason T. L. Wang |
Detecting Conserved RNA Secondary Structures in Viral Genomes: The RADAR Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BioSurveillance ![In: Intelligence and Security Informatics: Biosurveillance, Second NSF Workshop, BioSurveillance 2007, New Brunswick, NJ, USA, May 22, 2007, Proceedings., pp. 222-227, 2007, Springer, 978-3-540-72607-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
31 | Sagi Snir, Lior Pachter |
Phylogenetic Profiling of Insertions and Deletions in Vertebrate Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 2-5, 2006, Proceedings, pp. 265-280, 2006, Springer, 3-540-33295-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
31 | Shaojie Zhang, Brian Haas, Eleazar Eskin, Vineet Bafna |
Searching Genomes for Noncoding RNA Using FastR. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 2(4), pp. 366-379, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Noncoding RNA, riboswitch, bacterial genome, filtration, database search |
31 | Zu-Guo Yu, Vo Anh, Li-Quan Zhou |
Fractal and Dynamical Language Methods to Construct Phylogenetic Tree Based on Protein Sequences from Complete Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICNC (3) ![In: Advances in Natural Computation, First International Conference, ICNC 2005, Changsha, China, August 27-29, 2005, Proceedings, Part III, pp. 337-347, 2005, Springer, 3-540-28320-X. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
31 | Guillaume Blin, Romeo Rizzi |
Conserved Interval Distance Computation Between Non-trivial Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
COCOON ![In: Computing and Combinatorics, 11th Annual International Conference, COCOON 2005, Kunming, China, August 16-29, 2005, Proceedings, pp. 22-31, 2005, Springer, 3-540-28061-8. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Conserved interval distance, Exemplar string, Longest Common Substring, Duplicated genes, Computational complexity, Matching |
31 | Bob Mau, Aaron E. Darling, Nicole T. Perna |
Identifying Evolutionarily Conserved Segments Among Multiple Divergent and Rearranged Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comparative Genomics ![In: Comparative Genomics, RECOMB 2004 International Workshop, RCG 2004, Bertinoro, Italy, October 16-19, 2004, Revised Selected Papers, pp. 72-84, 2004, Springer, 3-540-24455-7. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
31 | Guojun Li, Xingqin Qi, Xiaoli Wang, Binhai Zhu |
A Linear-Time Algorithm for Computing Translocation Distance between Signed Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 15th Annual Symposium, CPM 2004, Istanbul,Turkey, July 5-7, 2004, Proceedings, pp. 323-332, 2004, Springer, 3-540-22341-X. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
31 | Nils Svangård, Peter Nordin |
Automated Aesthetic Selection of Evolutionary Art by Distance Based Classification of Genomes and Phenomes Using the Universal Similarity Metric. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EvoWorkshops ![In: Applications of Evolutionary Computing, EvoWorkshops 2004: EvoBIO, EvoCOMNET, EvoHOT, EvoIASP, EvoMUSART, and EvoSTOC, Coimbra, Portugal, April 5-7, 2004, Proceedings, pp. 447-456, 2004, Springer, 3-540-21378-3. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
31 | Aaron E. Darling, Bob Mau, Mark Craven, Nicole T. Perna |
Multiple Alignment of Rearranged Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 738-739, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
31 | Michael West, Max H. Garzon, Derrel Blain |
DNA-Like Genomes for Evolution in silico. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Genetic and Evolutionary Computation - GECCO 2003, Genetic and Evolutionary Computation Conference, Chicago, IL, USA, July 12-16, 2003. Proceedings, Part I, pp. 413-424, 2003, Springer, 3-540-40602-6. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
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