Search results for "methylation"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
177	Ilya Levner, Sylvia Drabycz, Gloria Roldan, Paula De Robles, J. Gregory Cairncross, Joseph Ross Mitchell	Predicting MGMT Methylation Status of Glioblastomas from MRI Texture.	MICCAI (1)	2009	DBLP DOI BibTeX RDF
164	Ozy Sjahputera, James M. Keller, J. Wade Davis, Kristen H. Taylor, Farahnaz Rahmatpanah, Huidong Shi, Derek Anderson, Samuel Blisard, Robert H. Luke III, Mihail Popescu, Gerald C. Arthur, Charles William Caldwell	Relational Analysis of CpG Islands Methylation and Gene Expression in Human Lymphomas Using Possibilistic C-Means Clustering and Modified Cluster Fuzzy Density.	IEEE ACM Trans. Comput. Biol. Bioinform.	2007	DBLP DOI BibTeX RDF	cluster density, clustering, fuzzy sets, microarray, expression, Methylation
144	Christopher Previti, Oscar Harari, Igor Zwir, Coral del Val	Novel approaches to the prediction of CpG islands and their methylation status.	SCSC	2007	DBLP BibTeX RDF	CpG islands, data mining, classification, unsupervised learning, methylation
144	Dang Hung Tran, Tho Hoan Pham, Kenji Satou, Tu Bao Ho	Conditional Random Fields for Predicting and Analyzing Histone Occupancy, Acetylation and Methylation Areas in DNA Sequences.	EvoWorkshops	2006	DBLP DOI BibTeX RDF	Histone proteins, acetylation, conditional random fields, methylation
116	Howard Cedar	Orchestration of DNA Methylation.	RECOMB	2008	DBLP DOI BibTeX RDF
116	Zejin Jason Ding, You Feng, Yujun George Zheng, Yan-Qing Zhang 0001	Granular decision fusion systems for effective protein methylation pPrediction.	CIBCB	2008	DBLP DOI BibTeX RDF
116	Ken Komiya, Noriko Hirayama, Masayuki Yamamura	An Interface for a Computing Model Using Methylation to Allow Precise Population Control by Quantitative Monitoring.	DNA	2007	DBLP DOI BibTeX RDF
104	Yuanyuan Xiao, Mark R. Segal, Eugene Andres Houseman, Joseph Wiemels, John K. Wiencke, Shichun Zheng, Margaret R. Wrensch, Brock C. Christensen, Carmen J. Marsit, Karl T. Kelsey, Heather H. Nelson, Margaret R. Karagas, Ru-Fang Yeh	Analysis of High-throughput DNA Methylation Bead Arrays Utilizing Bayesian Genotyping Algorithms.	BMEI (1)	2008	DBLP DOI BibTeX RDF	Illumina bead array, model-based clustering, bayesian algorithm, methylation
101	Christopher Previti, Oscar Harari, Coral del Val	Mining and Predicting CpG islands.	FUZZ-IEEE	2007	DBLP DOI BibTeX RDF
76	Anna Y. Kuznetsova, Richard C. Deth	A model for modulation of neuronal synchronization by D4 dopamine receptor-mediated phospholipid methylation.	J. Comput. Neurosci.	2008	DBLP DOI BibTeX RDF	Gamma oscillations, Potassium channel, Schizophrenia, Membrane fluidity, Attention-deficit hyperactivity disorder, Attention, Autism
76	Ben Niu 0002, Qiang Yang 0001, Jinyan Li 0001, Shiu Chi-keung, Sankar K. Pal	Discovering Patterns of DNA Methylation: Rule Mining with Rough Sets and Decision Trees, and Comethylation Analysis.	PReMI	2007	DBLP DOI BibTeX RDF
76	Nevenka Dimitrova, Susannah Gal	MethyLogic: Implementation of Boolean Logic Using DNA Methylation.	DNA	2006	DBLP DOI BibTeX RDF
48	Peter F. Arndt, Christopher B. Burge, Terence Hwa	DNA sequence evolution with neighbor-dependent mutation.	RECOMB	2002	DBLP DOI BibTeX RDF	CpG-methylation-deamination, DNA sequence evolution, single-and dinucleotide frequencies
43	Jie Lv 0001, Yan Zhang 0016, Yunfeng Qi, Hongbo Liu 0004, Jiang Zhu, Jianzhong Su, Ruijie Zhang	ChIP-seq Data Plays an Important Role in a Cytosine-Based DNA Methylation Prediction Model.	FSKD (5)	2009	DBLP DOI BibTeX RDF	tissue-specific, model, DNA, methylation
40	Tho Hoan Pham, Tu Bao Ho, Dang Hung Tran, Kenji Satou	Prediction of Histone Modifications in DNA sequences.	BIBE	2007	DBLP DOI BibTeX RDF
40	Wenyi Bi, Jonas Dunn, Sean R. McCorkle, Reginald Gabriel, Walter Lewis	Identify the gene positions of methylated DNA with a database approach.	SMC	2007	DBLP DOI BibTeX RDF
40	Ismael Ejarque, Guillermo López-Campos, Michel Herranz, Francisco-Javier Vicente, Fernando Martín-Sánchez	A Bioinformatic Approach to Epigenetic Susceptibility in Non-disjunctional Diseases.	ISBMDA	2005	DBLP DOI BibTeX RDF
36	Chetan Mittal, Nevenka Dimitrova, Vijaykumar Channakeshava	MDDM: A Resource for Differential Methylation in Cancer.	BIBM	2007	DBLP DOI BibTeX RDF
31	Muneeba Jilani, Nurit Haspel	Investigating the Role of Gene Body Methylation and CpG Methylation in Cancer Subtyping.	ICBRA	2023	DBLP DOI BibTeX RDF
31	Shicai Fan, Likun Wang, Liang Liang, Xiaohong Cao, Jianxiong Tang, Qi Tian	The progress on the estimation of DNA methylation level and the detection of abnormal methylation.	Quant. Biol.	2022	DBLP DOI BibTeX RDF
31	Ya-Ting Sabrina Chang, Ming-Ren Yen, Pao-Yang Chen	BSImp: Imputing Partially Observed Methylation Patterns for Evaluating Methylation Heterogeneity.	Frontiers Bioinform.	2022	DBLP DOI BibTeX RDF
31	Yu Liu 0059	scDeconv: an R package to deconvolve bulk DNA methylation data with scRNA-seq data and paired bulk RNA-DNA methylation data.	Briefings Bioinform.	2022	DBLP DOI BibTeX RDF
31	Jinpu Cai, Yuyang Xu, Wen Zhang, Shiying Ding, Yuewei Sun, Jingyi Lyu, Meiyu Duan, Shuai Liu 0010, Lan Huang 0002, Fengfeng Zhou	A comprehensive comparison of residue-level methylation levels with the regression-based gene-level methylation estimations by ReGear.	Briefings Bioinform.	2021	DBLP DOI BibTeX RDF
31	Yan Huang, Pingping Wang, Wenyang Zhou, Meng Luo 0001, Zhaochun Xu, Rui Cheng 0003, Chang Xu, Xiyun Jin, Yiqun Li, Qinghua Jiang	Comprehensive analysis of partial methylation domains in colorectal cancer based on single-cell methylation profiles.	Briefings Bioinform.	2021	DBLP DOI BibTeX RDF
31	Chen Lyu, Manyan Huang, Nianjun Liu, Zhongxue Chen, Philip J. Lupo, Benjamin Tycko, John S. Witte, Charlotte A. Hobbs, Ming Li	Detecting methylation quantitative trait loci using a methylation random field method.	Briefings Bioinform.	2021	DBLP DOI BibTeX RDF
31	Natalie Mezey, William C. S. Cho, Kyle K. Biggar	Intriguing Origins of Protein Lysine Methylation: Influencing Cell Function Through Dynamic Methylation.	Genom. Proteom. Bioinform.	2019	DBLP DOI BibTeX RDF
31	Xiangyu Wu, Zhen Wei, Kunqi Chen, Qing Zhang, Jionglong Su, Hui Liu 0024, Lin Zhang 0015, Jia Meng	m6Acomet: large-scale functional prediction of individual m6A RNA methylation sites from an RNA co-methylation network.	BMC Bioinform.	2019	DBLP DOI BibTeX RDF
31	Changchun Xie, Yuet-Kin Leung, Aimin Chen, Ding-Xin Long, Catherine Hoyo, Shuk-Mei Ho	Differential methylation values in differential methylation analysis.	Bioinform.	2019	DBLP DOI BibTeX RDF
31	Flavie Perrier	Bio-statistical approaches to evaluate the link between specific nutrients and methylation patterns in a breast cancer case-control study nested within the European Prospective Investigation into Cancer and Nutrition (EPIC) study. (Approches bio-statistiques pour évaluer le lien entre nutriments et profils de méthylation du cancer du sein dans l'étude prospective Européenne sur le Cancer et la Nutrition (EPIC)).		2018	RDF
31	Elior Rahmani, Regev Schweiger, Liat Shenhav, Eleazar Eskin, Eran Halperin	A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference.	RECOMB	2017	DBLP DOI BibTeX RDF
31	Izaskun Mallona, Anna Díez-Villanueva, Miguel A. Peinado	Methylation plotter: a web tool for dynamic visualization of DNA methylation data.	Source Code Biol. Medicine	2014	DBLP DOI BibTeX RDF
31	Ioannis Valavanis, Emmanouil G. Sifakis, Panagiotis Georgiadis 0003, Sotirios Kyrtopoulos, Aristotelis A. Chatziioannou	A Composite Framework for the Statistical Analysis of Epidemiological DNA Methylation Data with the Infinium Human Methylation 450K BeadChip.	IEEE J. Biomed. Health Informatics	2014	DBLP DOI BibTeX RDF
31	Annabelle Congras	Analyse de la méthylation de l'ADN spermatique et développement de cellules pluripotentes induites chez des verrats infertiles porteurs ou non de remaniements chromosomiques. (Spermatic DNA methylation analysis and development of induced pluripotent stem cells from infertiles boars carriers or not of chromosomal rearrangements).		2014	RDF
31	Michael Stevens, Jeffrey B. Cheng, Mingchao Xie, Joseph F. Costello, Ting Wang	MethylCRF, an Algorithm for Estimating Absolute Methylation Levels at Single CpG Resolution from Methylation Enrichment and Restriction Enzyme Sequencing Methods.	RECOMB	2013	DBLP DOI BibTeX RDF
31	Xuan Zhou 0002, Zhanchao Li, Zong Dai, Xiaoyong Zou	Prediction of methylation CpGs and their methylation degrees in human DNA sequences.	Comput. Biol. Medicine	2012	DBLP DOI BibTeX RDF
20	Jun Xie, Fang Fang, HaiRong Hu, Feng Xu, Qi Wu	Characterization of a Supercluster of SnoRNA Genes from Rice Genome.	BMEI (1)	2008	DBLP DOI BibTeX RDF	snoRNA, cluster, evolution, organization
16	Sadia Islam, Shafayat Bin Shabbir Mugdha, Shubhashis Roy Dipta, Md. Easin Arafat, Swakkhar Shatabda, Hamid Alinejad-Rokny, Iman Dehzangi	MethEvo: an accurate evolutionary information-based methylation site predictor.	Neural Comput. Appl.	2024	DBLP DOI BibTeX RDF
16	Honglei Wang, Tao Huang, Dong Wang, Wenliang Zeng, Yanjing Sun, Lin Zhang 0015	MSCAN: multi-scale self- and cross-attention network for RNA methylation site prediction.	BMC Bioinform.	2024	DBLP DOI BibTeX RDF
16	Jesse R. Walsh, Guangchao Sun, Jagadheshwar Balan, Jayson Hardcastle, Jason Vollenweider, Calvin Jerde, Kandelaria Rumilla, Christy Koellner, Alaa Koleilat, Linda Hasadsri, Benjamin Kipp, W. Garrett Jenkinson, Eric W. Klee	A supervised learning method for classifying methylation disorders.	BMC Bioinform.	2024	DBLP DOI BibTeX RDF
16	Naghme Nazer, Mohammad Hossein Sepehri, Hoda Mohammadzade, Mahya Mehrmohamadi	A novel approach toward optimal workflow selection for DNA methylation biomarker discovery.	BMC Bioinform.	2024	DBLP DOI BibTeX RDF
16	Pengyu Du, Yingli Chen, Qianzhong Li, Zhimin Gai, Hui Bai, Luqiang Zhang, Yuxian Liu, Yanni Cao, Yuanyuan Zhai, Wen Jin	CancerMHL: the database of integrating key DNA methylation, histone modifications and lncRNAs in cancer.	Database J. Biol. Databases Curation	2024	DBLP DOI BibTeX RDF
16	Bjarne Daenekas, Eilís Pérez, Fabio Boniolo, Sabina Stefan, Salvatore Benfatto, Martin Sill, Dominik Sturm, David T. W. Jones, David Capper, Marc Zapatka, Volker Hovestadt	Conumee 2.0: enhanced copy-number variation analysis from DNA methylation arrays for humans and mice.	Bioinform.	2024	DBLP DOI BibTeX RDF
16	Chenglin Yin, Ruheng Wang, Jianbo Qiao, Hua Shi, Hongliang Duan, Xinbo Jiang, Saisai Teng, Leyi Wei	NanoCon: contrastive learning-based deep hybrid network for nanopore methylation detection.	Bioinform.	2024	DBLP DOI BibTeX RDF
16	Wentao Zhang, Zikang Yan, Jian Peng, Shan Zhao, Longke Ran, Haoyang Yin, Dong Zhong, Junjun Yang, Junyong Ye, Shengsheng Xu	Magnetic resonance imaging and deoxyribonucleic acid methylation-based radiogenomic models for survival risk stratification of glioblastoma.	Medical Biol. Eng. Comput.	2024	DBLP DOI BibTeX RDF
16	Yi Ren, Peng Huang, Xiaoyan Huang, Lu Zhang, Lingjuan Liu, Wei Xiang, Liqun Liu, Xiaojie He	Alterations of DNA methylation profile in peripheral blood of children with simple obesity.	Health Inf. Sci. Syst.	2024	DBLP DOI BibTeX RDF
16	Tânia Barata, Vítor Pereira 0001, Ricardo Pires das Neves, Miguel Rocha 0001	Reconstruction of cell-specific models capturing the influence of metabolism on DNA methylation in cancer.	Comput. Biol. Medicine	2024	DBLP DOI BibTeX RDF
16	Jie Jiang, Bowen Song, Jia Meng, Jingxian Zhou	Tissue-specific RNA methylation prediction from gene expression data using sparse regression models.	Comput. Biol. Medicine	2024	DBLP DOI BibTeX RDF
16	Ling-Yan Gu, Ting-Bo Chen, Jianqiang Li 0001, Yu-An Huang, Zhihua Du, Victor C. M. Leung, Jie Chen 0027	Hybrid Bayesian Optimization-Based Graphical Discovery for Methylation Sites Prediction.	IEEE J. Biomed. Health Informatics	2024	DBLP DOI BibTeX RDF
16	Zhenxing Guo, Daoyu Duan, Wen Tang, Julia Zhu, William S. Bush, Liangliang Zhang, Xiaofeng Zhu, Fulai Jin, Hao Feng 0005	magpie: A power evaluation method for differential RNA methylation analysis in N6-methyladenosine sequencing.	PLoS Comput. Biol.	2024	DBLP DOI BibTeX RDF
16	Yufei Wang, Weifeng Liu, Zeyu Chen, Yachen Zang, Lijun Xu, Zheng Dai, Yibin Zhou, Jin Zhu	A noninvasive method for predicting clinically significant prostate cancer using magnetic resonance imaging combined with PRKY promoter methylation level: a machine learning study.	BMC Medical Imaging	2024	DBLP DOI BibTeX RDF
16	Martyna Kurbiel, Agata M. Wijata, Jakub Nalepa	Predicting the MGMT Promoter Methylation Status in T2-FLAIR Magnetic Resonance Imaging Scans Using Machine Learning.	ICPRAM	2024	DBLP DOI BibTeX RDF
16	Sheetal Rajpal, Ankit Rajpal, Arpita Saggar, Ashok K. Vaid, Virendra Kumar, Manoj Agarwal, Naveen Kumar 0001	XAI-MethylMarker: Explainable AI approach for biomarker discovery for breast cancer subtype classification using methylation data.	Expert Syst. Appl.	2023	DBLP DOI BibTeX RDF
16	Zidong Liu, Xiaoxu Chen, Pengfei Zhang, Fuyuan Li, Lingkai Zhang, Xueliang Li 0013, Tao Huang, Yi Zheng, Taiyong Yu, Tao Zhang, Wenxian Zeng, Hongzhao Lu, Yinghua Lv	Transcriptome-wide Dynamics of m6A mRNA Methylation During Porcine Spermatogenesis.	Genom. Proteom. Bioinform.	2023	DBLP DOI BibTeX RDF
16	Bowen Song, Daiyun Huang, Yuxin Zhang, Zhen Wei, Jionglong Su, João Pedro de Magalhães, Daniel J. Rigden, Jia Meng, Kunqi Chen	m6A-TSHub: Unveiling the Context-specific m6A Methylation and m6A-affecting Mutations in 23 Human Tissues.	Genom. Proteom. Bioinform.	2023	DBLP DOI BibTeX RDF
16	Wook Lee, Seokwoo Lee, Kyungsook Han	Constructing a Cancer Patient-Specific Network Based on Second-Order Partial Correlations of Gene Expression and DNA Methylation.	IEEE ACM Trans. Comput. Biol. Bioinform.	2023	DBLP DOI BibTeX RDF
16	Necla Nisa Soylu, Emre Sefer	BERT2OME: Prediction of 2′-O-Methylation Modifications From RNA Sequence by Transformer Architecture Based on BERT.	IEEE ACM Trans. Comput. Biol. Bioinform.	2023	DBLP DOI BibTeX RDF
16	Xiaoqing Peng, Wenjin Zhang, Wanxin Cui, Binrong Ding, Qingtong Lyu, Jianxin Wang 0001	ADmeth: A Manually Curated Database for the Differential Methylation in Alzheimer's Disease.	IEEE ACM Trans. Comput. Biol. Bioinform.	2023	DBLP DOI BibTeX RDF
16	Xiaowei Gao, Yan Wang, Weimin Hou, Zaiyi Liu, Xiaoke Ma	Multi-View Clustering for Integration of Gene Expression and Methylation Data With Tensor Decomposition and Self-Representation Learning.	IEEE ACM Trans. Comput. Biol. Bioinform.	2023	DBLP DOI BibTeX RDF
16	Xiuquan Wang, Mian Umair Ahsan, Yunyun Zhou, Kai Wang	Transformer-based DNA methylation detection on ionic signals from Oxford Nanopore sequencing data.	Quant. Biol.	2023	DBLP DOI BibTeX RDF
16	Numan Saeed, Muhammad Ridzuan, Hussain Alasmawi, Ikboljon Sobirov, Mohammad Yaqub	MGMT promoter methylation status prediction using MRI scans? An extensive experimental evaluation of deep learning models.	Medical Image Anal.	2023	DBLP DOI BibTeX RDF
16	Monika Khandelwal, Ranjeet Kumar Rout	PRMxAI: protein arginine methylation sites prediction based on amino acid spatial distribution using explainable artificial intelligence.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
16	Joungmin Choi, Chaelin Park, Heejoon Chae	meth-SemiCancer: a cancer subtype classification framework via semi-supervised learning utilizing DNA methylation profiles.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
16	Maia H. Malonzo, Harri Lähdesmäki	LuxHMM: DNA methylation analysis with genome segmentation via hidden Markov model.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
16	Weiwei Qian, Jian Zhou, Songtao Shou	Exploration of m6A methylation regulators as epigenetic targets for immunotherapy in advanced sepsis.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
16	Ximei Luo, Qun Li, Yifan Tang, Yan Liu, Quan Zou 0001, Jie Zheng, Ying Zhang, Lei Xu	Predicting active enhancers with DNA methylation and histone modification.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
16	Trevor Doherty, Emma Dempster, Eilis J. Hannon, Jonathan Mill, Richie Poulton, David Corcoran, Karen Sugden, Ben Williams, Avshalom Caspi, Terrie E. Moffitt, Sarah Jane Delany, Therese M. Murphy	A comparison of feature selection methodologies and learning algorithms in the development of a DNA methylation-based telomere length estimator.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
16	Tanwei Yuan, Dominic Edelmann, Ziwen Fan, Elizabeth Alwers, Jakob Nikolas Kather, Hermann Brenner, Michael Hoffmeister	Machine learning in the identification of prognostic DNA methylation biomarkers among patients with cancer: A systematic review of epigenome-wide studies.	Artif. Intell. Medicine	2023	DBLP DOI BibTeX RDF
16	JianGuo Bai, Hai Yang, ChangDe Wu	MLACNN: an attention mechanism-based CNN architecture for predicting genome-wide DNA methylation.	Theory Biosci.	2023	DBLP DOI BibTeX RDF
16	Haiwei Zhou, Wenxi Tan, Shao-Ping Shi 0001	DeepGpgs: a novel deep learning framework for predicting arginine methylation sites combined with Gaussian prior and gated self-attention mechanism.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
16	Yifan Yang 0001, Haoyuan Liu, Yi Liu, Liyuan Zhou, Xiaoqi Zheng, Rongxian Yue, David L. Mattson, Srividya Kidambi, Mingyu Liang, Pengyuan Liu 0003, Xiaoqing Pan	E-value: a superior alternative to P-value and its adjustments in DNA methylation studies.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
16	Wubin Ding, Diljeet Kaur, Steve Horvath, Wanding Zhou	Comparative epigenome analysis using Infinium DNA methylation BeadChips.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
16	David Martínez-Enguita, Sanjiv K. Dwivedi, Rebecka Jörnsten, Mika Gustafsson	NCAE: data-driven representations using a deep network-coherent DNA methylation autoencoder identify robust disease and risk factor signatures.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
16	Siqi Gao, Hanwen Zhu, Kangwen Cai, Leiqin Liu, Zhiqiang Zhang, Yi Ding, Yaochen Xu, Xiaoqi Zheng, Jiantao Shi	TRAmHap: accurate prediction of transcriptional activity from DNA methylation haplotypes in bisulfite-sequencing data.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
16	Hao Zhu, Tong Liu, Zheng Wang 0049	scHiMe: predicting single-cell DNA methylation levels based on single-cell Hi-C data.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
16	Yetian Fan, April S. Chan, Jun Zhu, Suet Yi Leung, Xiaodan Fan	A Bayesian model for identifying cancer subtypes from paired methylation profiles.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
16	Dario Romagnoli, Agostina Nardone, Francesca Galardi, Marta Paoli, Francesca De Luca, Chiara Biagioni, Gian Marco Franceschini, Marta Pestrin, Giuseppina Sanna, Erica Moretti, Francesca Demichelis, Ilenia Migliaccio, Laura Biganzoli, Luca Malorni, Matteo Benelli	MIMESIS: minimal DNA-methylation signatures to quantify and classify tumor signals in tissue and cell-free DNA samples.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
16	Mochen Zhang, Wenting Zong, Dong Zou, Guoliang Wang, Wei Zhao, Fei Yang, Song Wu, Xinran Zhang, Xutong Guo, Yingke Ma, Zhuang Xiong, Zhang Zhang 0002, Yiming Bao, Rujiao Li	MethBank 4.0: an updated database of DNA methylation across a variety of species.	Nucleic Acids Res.	2023	DBLP DOI BibTeX RDF
16	Shahriar Faghani, Bardia Khosravi, Mana Moassefi, Gian Marco Conte, Bradley J. Erickson	A Comparison of Three Different Deep Learning-Based Models to Predict the MGMT Promoter Methylation Status in Glioblastoma Using Brain MRI.	J. Digit. Imaging	2023	DBLP DOI BibTeX RDF
16	Jianmei Zhao, Fengcui Qian, Xuecang Li, Zhengmin Yu, Jiang Zhu, Rui Yu, Yue Zhao, Ke Ding, Yanyu Li, Yongsan Yang, Qi Pan, Jiaxin Chen, Chao Song, Qiuyu Wang, Jian Zhang, Guohua Wang, Chunquan Li 0002	CanMethdb: a database for genome-wide DNA methylation annotation in cancers.	Bioinform.	2023	DBLP DOI BibTeX RDF
16	Marine Jeanmougin, Hans Petter Brodal, Heidi Dietrichson Pharo, Hege Marie Vedeld, Guro Elisabeth Lind	PoDCall: positive droplet calling and normalization of droplet digital PCR DNA methylation data.	Bioinform.	2023	DBLP DOI BibTeX RDF
16	Marie Denoulet, Mathilde Brulé, François Anquez, Audrey Vincent, Julie Schnipper, Eric Adriaenssens, Robert-Alain Toillon, Xuefen Le Bourhis, Chann Lagadec	ABSP: an automated R tool to efficiently analyze region-specific CpG methylation from bisulfite sequencing PCR.	Bioinform.	2023	DBLP DOI BibTeX RDF
16	Massimiliano Volpe, Jyotirmoy Das	methylR: a graphical interface for comprehensive DNA methylation array data analysis.	Bioinform.	2023	DBLP DOI BibTeX RDF
16		Correction to: Snapper: high-sensitive detection of methylation motifs based on Oxford Nanopore reads.	Bioinform.	2023	DBLP DOI BibTeX RDF
16	Dmitry Konanov, Vladislav V. Babenko, Aleksandra M. Belova, Arina G. Madan, Daria I Boldyreva, Oksana E. Glushenko, Ivan Butenko, Dmitry E. Fedorov, Alexander I Manolov, Danil V. Krivonos, Vassili N. Lazarev, Vadim M. Govorun, Elena N. Ilina	Snapper: high-sensitive detection of methylation motifs based on Oxford Nanopore reads.	Bioinform.	2023	DBLP DOI BibTeX RDF
16	Numan Saeed, Muhammad Ridzuan, Hussain Alasmawi, Ikboljon Sobirov, Mohammad Yaqub	MGMT promoter methylation status prediction using MRI scans? An extensive experimental evaluation of deep learning models.	CoRR	2023	DBLP DOI BibTeX RDF
16	Arthur Leroy, Ai Ling Teh, Frank Dondelinger, Mauricio A. Álvarez, Dennis Wang	Longitudinal prediction of DNA methylation to forecast epigenetic outcomes.	CoRR	2023	DBLP DOI BibTeX RDF
16	Lusanda M. Mtetwa, Elliasu Y. Salifu, Calvin A. Omolo, Mahmoud E. S. Soliman, Mbuso Faya	Halting aberrant DNA methylation via in silico Identification of potent inhibitors of DNMT3B enzyme: Atomistic insights.	Comput. Biol. Chem.	2023	DBLP DOI BibTeX RDF
16	Tran Nguyen Tuan Minh, Viet-Huan Le, Nguyen-Quoc-Khanh Le	Diffusion-tensor imaging and dynamic susceptibility contrast MRIs improve radiomics-based machine learning model of MGMT promoter methylation status in glioblastomas.	Biomed. Signal Process. Control.	2023	DBLP DOI BibTeX RDF
16	Xinlu Tang, Zhanfeng Mo, Cheng Chang, Xiaohua Qian	Group-shrinkage feature selection with a spatial network for mining DNA methylation data.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
16	Jie Gao, Yongxian Feng, Yan Yang, Yuetong Shi, Junjie Liu, Hao Lin 0001, Lirong Zhang	Identification of Key DNA methylation sites related to differentially expressed genes in Lung squamous cell carcinoma.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
16	Dohoon Lee, Bonil Koo, Jeewon Yang, Sun Kim	Metheor: Ultrafast DNA methylation heterogeneity calculation from bisulfite read alignments.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
16	Ximei Luo, Yansu Wang, Quan Zou 0001, Lei Xu	Recall DNA methylation levels at low coverage sites using a CNN model in WGBS.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
16	Wenxing Hu, Lixin Guan, Mengshan Li	Prediction of DNA Methylation based on Multi-dimensional feature encoding and double convolutional fully connected convolutional neural network.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
16	Lian Liu, Yumeng Zhou, Xiujuan Lei	RMDGCN: Prediction of RNA methylation and disease associations based on graph convolutional network with attention mechanism.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
16	Wei Jing Fong, Hong Ming Tan, Rishabh Garg, Ai Ling Teh, Hong Pan, Varsha Gupta, Bernadus Krishna, Zou Hui Chen, Natania Yovela Purwanto, Fabian Yap, Kok Hian Tan, Kok Yen Jerry Chan, Shiao-Yng Chan, Nicole Goh, Nikita Rane, Ethel Siew Ee Tan, Yuheng Jiang, Mei Han, Michael J. Meaney 0001, Dennis Wang, Jussi Keppo, Geoffrey Chern-Yee Tan	Comparing feature selection and machine learning approaches for predicting CYP2D6 methylation from genetic variation.	Frontiers Neuroinformatics	2023	DBLP DOI BibTeX RDF
16	Iva Gunjaca, Natalie Samhan, Jan Treur	A Multi-order Adaptive Network Model for Pathways of DNA Methylation and Its Effects in Individuals Developing Post-traumatic Stress Disorder.	COMPLEX NETWORKS (2)	2023	DBLP DOI BibTeX RDF
16	Keiji Yasuda, Miyuki Nakamura, Masatoshi Nagata, Masaru Honjo	Building a DNA Methylation Aging Clock Model on Less Labelled Data Using Item Response Theory.	BIOINFORMATICS	2023	DBLP DOI BibTeX RDF
16	Han Wang, Ruirui Cai, Xizeng Zong, Zhiquan He, Li Zhang	MSCAP: DNA Methylation Age Predictor based on Multiscale Convolutional Neural Network.	BIBM	2023	DBLP DOI BibTeX RDF
16	Vladimír Boza, Eduard Batmendijn, Peter Peresíni, Viktória Hodorová, Hana Lichancová, Rastislav Rabatin, Brona Brejová, Jozef Nosek, Tomás Vinar	Precise Nanopore Signal Modeling Improves Unsupervised Single-Molecule Methylation Detection.	ITAT	2023	DBLP BibTeX RDF
16	Marketa Nykrynova, Matej Bezdicek, Martina Lengerova, Helena Skutkova	Bacterial phenotype prediction based on methylation site profiles.	CIBCB	2023	DBLP DOI BibTeX RDF