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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
Group by:
The graphs summarize 431 occurrences of 272 keywords
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Results
Found 1936 publication records. Showing 1936 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
146 | Minoru Asogawa, Yukiko Fujiwara, Akihiko Konagaya |
A combination of a functional motif model and a structural motif model for a database validation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 174-183, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
functional motif model, structural motif model, database validation, leucine zipper motif, twisted alpha helix sequences, DNA binding site, alpha helix region, Swiss Protein database, helical structures, PDB database, neural network, hidden Markov models, HMM, hidden Markov model, database management systems, neural nets, DNA, genetics, biology computing, subsequence |
131 | Chengpeng Bi |
A Monte Carlo EM Algorithm for De Novo Motif Discovery in Biomolecular Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(3), pp. 370-386, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Monte Carlo EM, multiple sequence alignment, motif discovery, transcriptional regulation, Expectation maximization (EM) |
118 | Yingren Liu, Karuturi R. Krishna Murthy, Wing-Kin Sung |
ConstrainedMotif: A Periodicity Constraint Based Algorithm to Predict Cell-Cycle Associated Promoter Motifs Using Time-Course Gene Expression Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 19-21 October 2005, Minneapolis, MN, USA, pp. 250-257, 2005, IEEE Computer Society, 0-7695-2476-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Motif prediction, Microarray, Constrained optimization, Cell-cycle |
117 | Jing Zhang 0012, Xi Chen 0001, Ming Li 0001 |
Computing Exact p-Value for Structured Motif. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 18th Annual Symposium, CPM 2007, London, Canada, July 9-11, 2007, Proceedings, pp. 162-172, 2007, Springer, 978-3-540-73436-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Pattern and motif discovery, exact p-value, dynamic programming, structured motif |
115 | Eric P. Xing, Wei Wu 0023, Michael I. Jordan, Richard M. Karp |
LOGOS: a modular Bayesian model for de novo motif detection. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 2nd IEEE Computer Society Bioinformatics Conference, CSB 2003, Stanford, CA, USA, August 11-14, 2003, pp. 266-276, 2003, IEEE Computer Society, 0-7695-2000-6. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
111 | Sven Rahmann, Tobias Marschall, Frank Behler, Oliver Kramer 0001 |
Modeling evolutionary fitness for DNA motif discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Genetic and Evolutionary Computation Conference, GECCO 2009, Proceedings, Montreal, Québec, Canada, July 8-12, 2009, pp. 225-232, 2009, ACM, 978-1-60558-325-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
ea, evolutionary algorithms, local search, evolution strategies, computational biology, dna, motif discovery, transcription factor, es |
108 | Chengpeng Bi |
Multiple Sequence Local Alignment Using Monte Carlo EM Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings, pp. 465-476, 2007, Springer, 978-3-540-72030-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Monte Carlo EM, Multiple Sequence Local Alignment, Motif Discovery, Transcriptional Regulation, Expectation Maximization (EM) |
105 | Sing-Hoi Sze, Songjian Lu, Jianer Chen |
Integrating Sample-Driven and Pattern-Driven Approaches in Motif Finding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 4th International Workshop, WABI 2004, Bergen, Norway, September 17-21, 2004, Proceedings, pp. 438-449, 2004, Springer, 3-540-23018-1. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
101 | Lifang Liu 0001, Licheng Jiao, Hongwei Huo |
A Greedy Two-stage Gibbs Sampling Method for Motif Discovery in Biological Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMEI (1) ![In: Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, BMEI 2008, May 28-30, 2008, Sanya, Hainan, China - Volume 1, pp. 13-17, 2008, IEEE Computer Society, 978-0-7695-3118-2. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Gibbs sampling, Motif discovery, Transcription factors, Binding sites |
95 | Bin Fu, Ming-Yang Kao, Lusheng Wang 0001 |
Discovering Almost Any Hidden Motif from Multiple Sequences in Polynomial Time with Low Sample Complexity and High Success Probability. ![Search on Bibsonomy](Pics/bibsonomy.png) |
TAMC ![In: Theory and Applications of Models of Computation, 6th Annual Conference, TAMC 2009, Changsha, China, May 18-22, 2009. Proceedings, pp. 231-240, 2009, Springer, 978-3-642-02016-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
95 | Giovanna Martínez-Arellano, Carlos A. Brizuela |
Comparison of Simple Encoding Schemes in GA's for the Motif Finding Problem: Preliminary Results. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology, Second Brazilian Symposium on Bioinformatics, BSB 2007, Angra dos Reis, Brazil, August 29-31, 2007, Proceedings, pp. 22-33, 2007, Springer, 978-3-540-73730-8. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
90 | Leung-Yau Lo, Tak-Ming Chan, Kin-Hong Lee, Kwong-Sak Leung |
Challenges rising from learning motif evaluation functions using genetic programming. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Genetic and Evolutionary Computation Conference, GECCO 2010, Proceedings, Portland, Oregon, USA, July 7-11, 2010, pp. 171-178, 2010, ACM, 978-1-4503-0072-8. The full citation details ...](Pics/full.jpeg) |
2010 |
DBLP DOI BibTeX RDF |
transcription factor binding site (tfbs), modelling, genetic programming (gp), bioinformatics, motif discovery |
90 | Zhiping Wang, Mehmet M. Dalkilic, Sun Kim |
Guiding motif discovery by iterative pattern refinement. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2004 ACM Symposium on Applied Computing (SAC), Nicosia, Cyprus, March 14-17, 2004, pp. 162-166, 2004, ACM, 1-58113-812-1. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
framework, bioinformatics, pattern, Motif |
88 | Francis Y. L. Chin, Henry C. M. Leung, Siu-Ming Yiu, Tak Wah Lam, Roni Rosenfeld, Wai Wan Tsang, David K. Smith 0001, Y. Jiang |
Finding motifs for insufficient number of sequences with strong binding to transcription facto. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 125-132, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
binding energy, DNA microarray, transcription factor, motif finding |
86 | Vincent Lacroix, Cristina G. Fernandes, Marie-France Sagot |
Motif Search in Graphs: Application to Metabolic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 3(4), pp. 360-368, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
Reaction motif, leucine biosynthesis, evolution, graph algorithms, combinatorics, subgraph isomorphism, metabolic network, network motif |
84 | Henry C. M. Leung, Francis Y. L. Chin |
An Efficient Algorithm for the Extended (l, d)-Motif Problem with Unknown Number of Binding Sites. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 19-21 October 2005, Minneapolis, MN, USA, pp. 11-18, 2005, IEEE Computer Society, 0-7695-2476-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
84 | Henry C. M. Leung, Francis Y. L. Chin |
Generalized Planted (l, d)-Motif Problem with Negative Set. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 5th International Workshop, WABI 2005, Mallorca, Spain, October 3-6, 2005, Proceedings, pp. 264-275, 2005, Springer, 3-540-29008-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
84 | Soon-Heng Tan, Wing-Kin Sung, See-Kiong Ng |
Discovering Novel Interacting Motif Pairs from Large Protein-Protein Interaction Datasets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 19-21 March 2004, Taichung, Taiwan, pp. 568-575, 2004, IEEE Computer Society, 0-7695-2173-8. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
84 | Hiroki Arimura, Takeaki Uno |
An efficient polynomial space and polynomial delay algorithm for enumeration of maximal motifs in a sequence. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comb. Optim. ![In: J. Comb. Optim. 13(3), pp. 243-262, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Maximal motif, Data mining, Algorithm, Delay, Polynomial time, Pattern discovery, Enumeration, Motif, Sequence mining, Closed pattern, Closed itemset |
82 | Saurabh Sinha |
Discriminative motifs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sixth Annual International Conference on Computational Biology, RECOMB 2002, Washington, DC, USA, April 18-21, 2002, pp. 291-298, 2002, ACM, 1-58113-498-3. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
80 | Elena Zheleva, Abdullah N. Arslan |
Fast Motif Search in Protein Sequence Databases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSR ![In: Computer Science - Theory and Applications, First International Symposium on Computer Science in Russia, CSR 2006, St. Petersburg, Russia, June 8-12, 2006, Proceedings, pp. 670-681, 2006, Springer, 3-540-34166-8. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
motif search, PROSITE pattern, heuristic, suffix tree, preprocessing, regular expression matching |
74 | Riccardo Dondi, Guillaume Fertin, Stéphane Vialette |
Maximum Motif Problem in Vertex-Colored Graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 20th Annual Symposium, CPM 2009, Lille, France, June 22-24, 2009, Proceedings, pp. 221-235, 2009, Springer, 978-3-642-02440-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
74 | Nadja Betzler, Michael R. Fellows, Christian Komusiewicz, Rolf Niedermeier |
Parameterized Algorithms and Hardness Results for Some Graph Motif Problems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 19th Annual Symposium, CPM 2008, Pisa, Italy, June 18-20, 2008, Proceedings, pp. 31-43, 2008, Springer, 978-3-540-69066-5. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
74 | Shahar Michal, Tor Ivry, Omer Cohen, Moshe Sipper, Danny Barash |
Finding a Common Motif of RNA Sequences Using Genetic Programming: The GeRNAMo System. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(4), pp. 596-610, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
74 | Sing-Hoi Sze, Xiaoyan Zhao |
Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Systems Biology and Regulatory Genomics ![In: Systems Biology and Regulatory Genomics, Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA; December 2-4, 2005, Revised Selected Papers, pp. 198-211, 2005, Springer, 978-3-540-48293-2. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
74 | Topon Kumar Paul, Hitoshi Iba |
Identification of weak motifs in multiple biological sequences using genetic algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Genetic and Evolutionary Computation Conference, GECCO 2006, Proceedings, Seattle, Washington, USA, July 8-12, 2006, pp. 271-278, 2006, ACM, 1-59593-186-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
(l, d) motif, protein binding site, regulatory sites, genetic algorithm, clustering, DNA sequences, motif discovery |
71 | Osman Abul |
MotifHider: A knowledge hiding approach to sequence masking. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISCIS ![In: The 24th International Symposium on Computer and Information Sciences, ISCIS 2009, 14-16 September 2009, North Cyprus, pp. 171-176, 2009, IEEE. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
71 | Menaka Rajapakse, Bertil Schmidt, Vladimir Brusic |
Multi-Objective Evolutionary Algorithm for Discovering Peptide Binding Motifs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EvoWorkshops ![In: Applications of Evolutionary Computing, EvoWorkshops 2006: EvoBIO, EvoCOMNET, EvoHOT, EvoIASP, EvoINTERACTION, EvoMUSART, and EvoSTOC, Budapest, Hungary, April 10-12, 2006, Proceedings, pp. 149-158, 2006, Springer, 3-540-33237-5. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
71 | Vipin Narang, Wing-Kin Sung, Ankush Mittal |
LocalMotif - An In-Silico Tool for Detecting Localized Motifs in Regulatory Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICTAI ![In: 18th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2006), 13-15 November 2006, Arlington, VA, USA, pp. 791-799, 2006, IEEE Computer Society, 0-7695-2728-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
71 | Jeremy Buhler, Martin Tompa |
Finding motifs using random projections. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fifth Annual International Conference on Computational Biology, RECOMB 2001, Montréal, Québec, Canada, April 22-25, 2001, pp. 69-76, 2001, ACM, 1-58113-353-7. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
70 | Rupali Patwardhan, Haixu Tang, Sun Kim, Mehmet M. Dalkilic |
An Approximate de Bruijn Graph Approach to Multiple Local Alignment and Motif Discovery in Protein Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
VDMB ![In: Data Mining and Bioinformatics, First International Workshop, VDMB 2006, Seoul, Korea, September 11, 2006, Revised Selected Papers, pp. 158-169, 2006, Springer, 3-540-68970-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
proteins, Motif discovery, de Bruijn graph, local alignment |
70 | Shaun Mahony, David Hendrix, Terry J. Smith, Aaron Golden |
Self-Organizing Maps of Position Weight Matrices for Motif Discovery in Biological Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Artif. Intell. Rev. ![In: Artif. Intell. Rev. 24(3-4), pp. 397-413, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
biological motif discovery, self-organizing map |
67 | Viktor Martyanov, Larkin Elderon, Amy Gladfelter, Dhanalakshmi R. Nair, Robert H. Gross |
Identifying Fungal Regulatory Motif Patterns Using SCOPE, an Ensemble Learning Method Motif Finder. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, USA, pp. 1183-1187, 2007, IEEE Computer Society, 978-1-4244-1509-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
67 | Takafumi Matsuura, Tohru Ikeguchi |
Chaotic Motif Sampler for Motif Discovery Using Statistical Values of Spike Time-Series. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICONIP (1) ![In: Neural Information Processing, 14th International Conference, ICONIP 2007, Kitakyushu, Japan, November 13-16, 2007, Revised Selected Papers, Part I, pp. 673-682, 2007, Springer, 978-3-540-69154-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
67 | Geir Kjetil Sandve, Magnar Nedland, Øyvind Bø Syrstad, Lars Andreas Eidsheim, Osman Abul, Finn Drabløs |
Accelerating Motif Discovery: Motif Matching on Parallel Hardware. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 6th International Workshop, WABI 2006, Zurich, Switzerland, September 11-13, 2006, Proceedings, pp. 197-206, 2006, Springer, 3-540-39583-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
66 | K. R. Seeja, Mohd. Afshar Alam, S. K. Jain |
MotifMiner: A Table Driven Greedy Algorithm for DNA Motif Mining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIC (2) ![In: Emerging Intelligent Computing Technology and Applications. With Aspects of Artificial Intelligence, 5th International Conference on Intelligent Computing, ICIC 2009, Ulsan, South Korea, September 16-19, 2009, Proceedings, pp. 397-406, 2009, Springer, 978-3-642-04019-1. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Regulatory motif, Greedy approach, Motif discovery, Information content |
66 | Bin Kuang, Nini Rao |
A Two - Block Motif Discovery Method with Improved Accuracy. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIC (1) ![In: Advanced Intelligent Computing Theories and Applications. With Aspects of Theoretical and Methodological Issues, Third International Conference on Intelligent Computing, ICIC 2007, Qingdao, China, August 21-24, 2007, Proceedings, pp. 775-781, 2007, Springer, 978-3-540-74170-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Motif Base, Accuracy, Gibbs Sampling, Motif Discovery, Pwm |
66 | Bill C. H. Chang, Asanga Ratnaweera, Saman K. Halgamuge, Harry C. Watson |
Particle Swarm Optimisation for Protein Motif Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Genet. Program. Evolvable Mach. ![In: Genet. Program. Evolvable Mach. 5(2), pp. 203-214, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
protein sequence motif, symbolic data optimisation, motif discovery, particle swarm optimisation |
64 | Alexandre P. Francisco, Arlindo L. Oliveira, Ana T. Freitas |
Identification of Transcription Factor Binding Sites in Promoter Regions by Modularity Analysis of the Motif Co-occurrence Graph. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings, pp. 220-231, 2008, Springer, 978-3-540-79449-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
64 | Lifang Liu 0001, Licheng Jiao |
Detection of Transcription Factor Binding Sites via Motif Clustering and Matching. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSSE (1) ![In: International Conference on Computer Science and Software Engineering, CSSE 2008, Volume 1: Artificial Intelligence, December 12-14, 2008, Wuhan, China, pp. 427-430, 2008, IEEE Computer Society, 978-0-7695-3336-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
64 | Xi Li, Dianhui Wang |
An Improved Genetic Algorithm for DNA Motif Discovery with Public Domain Information. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICONIP (1) ![In: Advances in Neuro-Information Processing, 15th International Conference, ICONIP 2008, Auckland, New Zealand, November 25-28, 2008, Revised Selected Papers, Part I, pp. 521-528, 2008, Springer, 978-3-642-02489-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
64 | Derong Liu 0001, Xiaoxu Xiong, Bhaskar DasGupta, Huaguang Zhang |
Motif discoveries in unaligned molecular sequences using self-organizing neural networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Neural Networks ![In: IEEE Trans. Neural Networks 17(4), pp. 919-928, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
64 | Brona Brejová, Daniel G. Brown 0001, Ian M. Harrower, Tomás Vinar |
New Bounds for Motif Finding in Strong Instances. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 17th Annual Symposium, CPM 2006, Barcelona, Spain, July 5-7, 2006, Proceedings, pp. 94-105, 2006, Springer, 3-540-35455-7. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
64 | Paul Horton, Wataru Fujibuchi |
An Upper Bound on the Hardness of Exact Matrix Based Motif Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 16th Annual Symposium, CPM 2005, Jeju Island, Korea, June 19-22, 2005, Proceedings, pp. 219-228, 2005, Springer, 3-540-26201-6. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
61 | Christian Klukas, Falk Schreiber, Henning Schwöbbermeyer |
Coordinated perspectives and enhanced force-directed layout for the analysis of network motifs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
APVIS ![In: Asia-Pacific Symposium on Information Visualisation, APVIS 2006, Tokyo, Japan, February 1-3, 2006, pp. 39-48, 2006, Australian Computer Society, 1-920682-41-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
coordinated perspectives, graph drawing, network analysis, multiple views, information visualisation, network motifs, force-directed layout |
61 | Paul Horton |
Tsukuba BB: A Branch and Bound Algorithm for Local Multiple Sequence Alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 11th Annual Symposium, CPM 2000, Montreal, Canada, June 21-23, 2000, Proceedings, pp. 84-98, 2000, Springer, 3-540-67633-3. The full citation details ...](Pics/full.jpeg) |
2000 |
DBLP DOI BibTeX RDF |
|
60 | Doaa Altarawy, Mohamed A. Ismail, Sahar Mohamed Ghanem |
MProfiler: A Profile-Based Method for DNA Motif Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PRIB ![In: Pattern Recognition in Bioinformatics, 4th IAPR International Conference, PRIB 2009, Sheffield, UK, September 7-9, 2009. Proceedings, pp. 13-23, 2009, Springer, 978-3-642-04030-6. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
DNA Motif Finding, Clustering, Bioinformatics |
60 | Kazuhito Shida |
Short Segment Frequency Equalization: A Simple and Effective Alternative Treatment of Background Models in Motif Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PRIB ![In: Pattern Recognition in Bioinformatics, 4th IAPR International Conference, PRIB 2009, Sheffield, UK, September 7-9, 2009. Proceedings, pp. 354-364, 2009, Springer, 978-3-642-04030-6. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Markov background model, Eukaryotic promoters, Gibbs sampling, Motif discovery, Stochastic method |
60 | Mohammed Al-Shalalfa, Reda Alhajj |
Motif Location Prediction by Divide and Conquer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIRD ![In: Bioinformatics Research and Development, Second International Conference, BIRD 2008, Vienna, Austria, July 7-9, 2008, Proceedings, pp. 102-113, 2008, Springer, 978-3-540-70598-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
conserved motifs, divide and conquer, gene expression data, sequence analysis, motif discovery |
60 | Ting Gong, Jianhua Xuan, Li Chen 0018, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke |
Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings, pp. 244-255, 2008, Springer, 978-3-540-79449-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Motif analysis, transcriptional modules, estrogen receptor binding, gene regulatory networks, sparse component analysis |
60 | Alberto Apostolico, Matteo Comin, Laxmi Parida |
Bridging Lossy and Lossless Compression by Motif Pattern Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GTIT-C ![In: General Theory of Information Transfer and Combinatorics, pp. 793-813, 2006, Springer, 3-540-46244-9. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
lossy and lossless data compression, off-line textual substitution, grammar based codes, pattern matching, Pattern discovery, grammatical inference, motif |
60 | Eleazar Eskin |
From profiles to patterns and back again: a branch and bound algorithm for finding near optimal motif profiles. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 115-124, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
patterns, profiles, transcription factor binding sites, motif-finding |
57 | Wangsen Feng, Zhanyong Wang, Lusheng Wang 0001 |
Identification of Distinguishing Motifs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 18th Annual Symposium, CPM 2007, London, Canada, July 9-11, 2007, Proceedings, pp. 253-264, 2007, Springer, 978-3-540-73436-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
motif detection, two groups, EM Algorithms |
54 | Santan Challa, Parimala Thulasiraman |
Protein Sequence Motif Discovery on Distributed Supercomputer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GPC ![In: Advances in Grid and Pervasive Computing, Third International Conference, GPC 2008, Kunming, China, May 25-28, 2008. Proceedings, pp. 232-243, 2008, Springer, 978-3-540-68081-9. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
54 | Anjali Mohapatra, P. M. Mishra, S. Padhy |
Motif Search in DNA Sequences Using Generalized Suffix Tree. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIT ![In: 10th International Conference on Information Technology, ICIT 2007, Roukela, India, 17-20 December 2007, pp. 100-103, 2007, IEEE Computer Society, 0-7695-3068-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
54 | Jisu Kim, Byungkyu Park, Kyungsook Han |
Prediction of Interacting Motif Pairs Using Stochastic Boosting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
FBIT ![In: Frontiers in the Convergence of Bioscience and Information Technologies 2007, FBIT 2007, Jeju Island, Korea, October 11-13, 2007, pp. 95-100, 2007, IEEE Computer Society, 978-0-7695-2999-8. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
54 | Ya Zhang 0002, Yixin Chen 0002, Xiang Ji |
Motif Discovery as a Multiple-Instance Problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICTAI ![In: 18th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2006), 13-15 November 2006, Arlington, VA, USA, pp. 805-809, 2006, IEEE Computer Society, 0-7695-2728-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
54 | Audrey Girouard, Noah W. Smith, Donna K. Slonim |
Motif Evaluation by Leave-one-out Scoring. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBCB ![In: Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2006, Renaissance Hotel Downtown, Toronto, Ontario, Canada, September 28-29, 2006, pp. 1-7, 2006, IEEE, 1-4244-0623-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
54 | Justin Schonfeld, Dan Ashlock |
Filtration and Depth Annotation Improve Non-linear Projection for RNA Motif Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBCB ![In: Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2006, Renaissance Hotel Downtown, Toronto, Ontario, Canada, September 28-29, 2006, pp. 1-8, 2006, IEEE, 1-4244-0623-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
51 | Lifang Liu 0001, Licheng Jiao |
Moitf GibbsGA: Sampling Transcription Factor Binding Sites Coupled with PSFM Optimization by GA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISICA ![In: Advances in Computation and Intelligence, 4th International Symposium, ISICA 2009, Huangshi, China, Ocotober 23-25, 2009, Proceedings, pp. 31-39, 2009, Springer, 978-3-642-04842-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
51 | Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli |
An Interaction-Dependent Model for Transcription Factor Binding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Systems Biology and Regulatory Genomics ![In: Systems Biology and Regulatory Genomics, Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA; December 2-4, 2005, Revised Selected Papers, pp. 225-234, 2005, Springer, 978-3-540-48293-2. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
51 | Asim S. Siddiqui, Gordon Robertson, Misha Bilenky, Tamara Astakhova, Obi L. Griffith, Maik Hassel, Keven Lin, Stephen B. Montgomery, Mehrdad Oveisi, Erin Pleasance, Neil Robertson 0004, Monica C. Sleumer, Kevin Teague, Richard Varhol, Maggie Zhang, Steven J. M. Jones |
cis-Regulatory Element Prediction in Mammalian Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 203-206, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
51 | Saurabh Sinha, Martin Tompa |
Performance Comparison of Algorithms for FindingTranscription Factor Binding Sites. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 3rd IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2003), 10-12 March 2003, Bethesda, MD, USA, pp. 214-, 2003, IEEE Computer Society, 0-7695-1907-5. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
51 | Yoshiki Tanaka, Kuniaki Uehara |
Discover Motifs in Multi-dimensional Time-Series Using the Principal Component Analysis and the MDL Principle. ![Search on Bibsonomy](Pics/bibsonomy.png) |
MLDM ![In: Machine Learning and Data Mining in Pattern Recognition, Third International Conference, MLDM 2003, Leipzig, Germany, July 5-7, 2003, Proceedings, pp. 252-265, 2003, Springer, 3-540-40504-6. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
50 | Yang Liu 0098, Xiaohong Jiang 0002, Huajun Chen, Jun Ma, Xiangyu Zhang |
MapReduce-Based Pattern Finding Algorithm Applied in Motif Detection for Prescription Compatibility Network. ![Search on Bibsonomy](Pics/bibsonomy.png) |
APPT ![In: Advanced Parallel Processing Technologies, 8th International Symposium, APPT 2009, Rapperswil, Switzerland, August 24-25, 2009, Proceedings, pp. 341-355, 2009, Springer, 978-3-642-03643-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
motif detection, pattern finding, prescription compatibility, complex network, MapReduce |
50 | Jan Schröder, Lars Wienbrandt, Gerd Pfeiffer, Manfred Schimmler |
Massively Parallelized DNA Motif Search on the Reconfigurable Hardware Platform COPACOBANA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PRIB ![In: Pattern Recognition in Bioinformatics, Third IAPR International Conference, PRIB 2008, Melbourne, Australia, October 15-17, 2008. Proceedings, pp. 436-447, 2008, Springer, 978-3-540-88434-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
DNA sequence analysis, High Performance Reconfigurable Computing (HPRC), FPGA, Motif finding |
50 | Mustafa Karabulut, Turgay Ibrikci |
Fuzzy C-Means Based DNA Motif Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIC (1) ![In: Advanced Intelligent Computing Theories and Applications. With Aspects of Theoretical and Methodological Issues, 4th International Conference on Intelligent Computing, ICIC 2008, Shanghai, China, September 15-18, 2008, Proceedings, pp. 189-195, 2008, Springer, 978-3-540-87440-9. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Fuzzy Clustering, DNA Sequences, Motif Finding |
50 | Mihail Halachev, Nematollaah Shiri |
Fast Structured Motif Search in DNA Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIRD ![In: Bioinformatics Research and Development, Second International Conference, BIRD 2008, Vienna, Austria, July 7-9, 2008, Proceedings, pp. 58-73, 2008, Springer, 978-3-540-70598-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
performance, suffix tree, DNA sequences, structured motif |
50 | Mehmet Kaya |
Motif Discovery Using Multi-Objective Genetic Algorithm in Biosequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IDA ![In: Advances in Intelligent Data Analysis VII, 7th International Symposium on Intelligent Data Analysis, IDA 2007, Ljubljana, Slovenia, September 6-8, 2007, Proceedings, pp. 320-331, 2007, Springer, 978-3-540-74824-3. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Multi-Objective Genetic Algorithms, Motif Discovery |
50 | Vered Kunik, Zach Solan, Shimon Edelman, Eytan Ruppin, David Horn |
Motif Extraction and Protein Classification. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005, pp. 80-85, 2005, IEEE Computer Society, 0-7695-2344-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
motif extraction, enzyme classification |
50 | Benjamin J. Raphael, Lung-Tien Liu, George Varghese |
A Uniform Projection Method for Motif Discovery in DNA Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 1(2), pp. 91-94, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
random projection, Motif discovery, combinatorial designs, low-discrepancy sequences, transcription factor binding sites |
46 | Alberto Apostolico, Claudia Tagliacollo |
Optimal Offline Extraction of Irredundant Motif Bases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
COCOON ![In: Computing and Combinatorics, 13th Annual International Conference, COCOON 2007, Banff, Canada, July 16-19, 2007, Proceedings, pp. 360-371, 2007, Springer, 978-3-540-73544-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Irredundant Motif, Pattern Matching, Design and Analysis of Algorithms, Motif Discovery, Basis |
44 | Bin Fu, Ming-Yang Kao, Lusheng Wang 0001 |
Efficient Algorithms for Model-Based Motif Discovery from Multiple Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
TAMC ![In: Theory and Applications of Models of Computation, 5th International Conference, TAMC 2008, Xi'an, China, April 25-29, 2008. Proceedings, pp. 234-245, 2008, Springer, 978-3-540-79227-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
44 | Daniel Quest, Kathryn Dempsey, Mohammad Shafiullah, Dhundy Bastola, Hesham H. Ali |
A parallel architecture for regulatory motif algorithm assessment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS ![In: 22nd IEEE International Symposium on Parallel and Distributed Processing, IPDPS 2008, Miami, Florida USA, April 14-18, 2008, pp. 1-8, 2008, IEEE. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
44 | Ruoming Jin, Scott McCallen, Eivind Almaas |
Trend Motif: A Graph Mining Approach for Analysis of Dynamic Complex Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICDM ![In: Proceedings of the 7th IEEE International Conference on Data Mining (ICDM 2007), October 28-31, 2007, Omaha, Nebraska, USA, pp. 541-546, 2007, IEEE Computer Society, 0-7695-3018-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
44 | Bernard Chen 0001, Stephen Pellicer, Phang C. Tai, Robert W. Harrison, Yi Pan 0001 |
Super Granular Shrink-SVM Feature Elimination (Super GS-SVM-FE) Model for Protein Sequence Motif Information Extraction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, USA, pp. 379-386, 2007, IEEE Computer Society, 978-1-4244-1509-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
44 | Jason Tsong-Li Wang, Dongrong Wen, Bruce A. Shapiro, Katherine G. Herbert, Jing Li, Kaushik Ghosh |
Toward an Integrated RNA Motif Database. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DILS ![In: Data Integration in the Life Sciences, 4th International Workshop, DILS 2007, Philadelphia, PA, USA, June 27-29, 2007, Proceedings, pp. 27-36, 2007, Springer, 978-3-540-73254-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
44 | Erliang Zeng, Giri Narasimhan |
Enhancing Motif Refinement by Incorporating Comparative Genomics Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings, pp. 329-337, 2007, Springer, 978-3-540-72030-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
44 | Huan Yu, Minping Qian, Minghua Deng |
Using a Stochastic AdaBoost Algorithm to Discover Interactome Motif Pairs from Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIC (3) ![In: Computational Intelligence and Bioinformatics, International Conference on Intelligent Computing, ICIC 2006, Kunming, China, August 16-19, 2006. Proceedings, Part III, pp. 622-630, 2006, Springer, 3-540-37277-6. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
44 | Yoshiki Tanaka, Kazuhisa Iwamoto, Kuniaki Uehara |
Discovery of Time-Series Motif from Multi-Dimensional Data Based on MDL Principle. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Mach. Learn. ![In: Mach. Learn. 58(2-3), pp. 269-300, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
time-series motifs, multi-dimensional time-series data, MDL principle good, PCA |
44 | Manuel Middendorf, Anshul Kundaje, Mihir Shah, Yoav Freund, Chris Wiggins 0001, Christina S. Leslie |
Motif Discovery Through Predictive Modeling of Gene Regulation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 9th Annual International Conference, RECOMB 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings, pp. 538-552, 2005, Springer, 3-540-25866-3. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
44 | Lusheng Wang 0001, Liang Dong, Hui Fan |
Randomized Algorithms for Motif Detection. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISAAC ![In: Algorithms and Computation, 15th International Symposium, ISAAC 2004, Hong Kong, China, December 20-22, 2004, Proceedings, pp. 884-895, 2004, Springer, 3-540-24131-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
44 | Zhaohui Sun, Jingyi Yang, Jitender S. Deogun |
MISAE: A New Approach for Regulatory Motif Extraction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 173-181, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
43 | Peera Liewlom, Thanawin Rakthanmanon, Kitsana Waiyamai |
Prediction of Enzyme Class by Using Reactive Motifs Generated from Binding and Catalytic Sites. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ADMA ![In: Advanced Data Mining and Applications, Third International Conference, ADMA 2007, Harbin, China, August 6-8, 2007, Proceedings, pp. 442-453, 2007, Springer, 978-3-540-73870-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
mutation control, sequence motif, reactive motif, enzyme function prediction, catalytic site, amino acid substitution group, binding site |
41 | Christina Boucher |
Faster Algorithms for Sampling and Counting Biological Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SPIRE ![In: String Processing and Information Retrieval, 16th International Symposium, SPIRE 2009, Saariselkä, Finland, August 25-27, 2009, Proceedings, pp. 243-253, 2009, Springer, 978-3-642-03783-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
41 | Pratibha Mehta Luthra, Sandeep Kumar Barodia, Amresh Prakash, Ramraghubir |
cDNA-Derived Amino Acid Sequence from Rat Brain A2aR Possesses Conserved Motifs PMNYM of TM 5 Domain, Which May Be Involved in Dimerization of A2aR. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PRIB ![In: Pattern Recognition in Bioinformatics, Second IAPR International Workshop, PRIB 2007, Singapore, October 1-2, 2007, Proceedings, pp. 41-50, 2007, Springer, 978-3-540-75285-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Adenosine A2a receptor, cDNA, GPCRs, RT-PCR, TM 5 |
41 | Mehmet Kaya |
A Multi-Objective Genetic Algorithm for Discovering Non-Dominated Motifs in DNA Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HIS ![In: 7th International Conference on Hybrid Intelligent Systems, HIS 2007, Kaiserslautern, Germany, September 17-19, 2007, pp. 180-185, 2007, IEEE Computer Society, 0-7695-2946-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
41 | Nadia Pisanti, Alexandra M. Carvalho, Laurent Marsan, Marie-France Sagot |
RISOTTO: Fast Extraction of Motifs with Mismatches. ![Search on Bibsonomy](Pics/bibsonomy.png) |
LATIN ![In: LATIN 2006: Theoretical Informatics, 7th Latin American Symposium, Valdivia, Chile, March 20-24, 2006, Proceedings, pp. 757-768, 2006, Springer, 3-540-32755-X. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
41 | Hiroki Arimura, Takeaki Uno |
A Polynomial Space and Polynomial Delay Algorithm for Enumeration of Maximal Motifs in a Sequence. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISAAC ![In: Algorithms and Computation, 16th International Symposium, ISAAC 2005, Sanya, Hainan, China, December 19-21, 2005, Proceedings, pp. 724-737, 2005, Springer, 3-540-30935-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Wengang Zhou, Chunguang Zhou, Guixia Liu, Yanxin Huang |
Identification of Transcription Factor Binding Sites Using Hybrid Particle Swarm Optimization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RSFDGrC (2) ![In: Rough Sets, Fuzzy Sets, Data Mining, and Granular Computing, 10th International Conference, RSFDGrC 2005, Regina, Canada, August 31 - September 3, 2005, Proceedings, Part II, pp. 438-445, 2005, Springer, 3-540-28660-8. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Fuqiang Ban, Savariraj Kingsley, Ross Johnson, Hicham Fenniri, Andriy Kovalenko 0001 |
Modeling the Zinc Chelating Rosette Nanotube. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICMENS ![In: 2005 International Conference on MEMS, NANO, and Smart Systems (ICMENS 2005), 24-27 July 2005, Banff, Alberta, Canada, pp. 379-382, 2005, IEEE Computer Society, 0-7695-2398-6. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Rhonda Harrison, Charles DeLisi |
A hypothesis driven approach to condition specific transcription factor binding site characterization in S.c.. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2002 ACM Symposium on Applied Computing (SAC), March 10-14, 2002, Madrid, Spain, pp. 151-158, 2002, ACM, 1-58113-445-2. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
41 | Laxmi Parida, Isidore Rigoutsos, Daniel E. Platt |
An Output-Sensitive Flexible Pattern Discovery Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 12th Annual Symposium, CPM 2001 Jerusalem, Israel, July 1-4, 2001 Proceedings, pp. 131-142, 2001, Springer, 3-540-42271-4. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
41 | Erika Tateishi, Osamu Maruyama, Satoru Miyano |
Extracting Best Consensus Motifs from Positive and Negative Examples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
STACS ![In: STACS 96, 13th Annual Symposium on Theoretical Aspects of Computer Science, Grenoble, France, February 22-24, 1996, Proceedings, pp. 219-230, 1996, Springer, 3-540-60922-9. The full citation details ...](Pics/full.jpeg) |
1996 |
DBLP DOI BibTeX RDF |
algorithms and computational complexity, genome informatics |
39 | Armando Muscariello, Guillaume Gravier, Frédéric Bimbot |
Variability Tolerant Audio Motif Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
MMM ![In: Advances in Multimedia Modeling, 15th International Multimedia Modeling Conference, MMM 2009, Sophia-Antipolis, France, January 7-9, 2009. Proceedings, pp. 275-286, 2009, Springer, 978-3-540-92891-1. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
audio pattern discovery, variable motif, dynamic time warping, normalized edit distance |
39 | Jaime I. Dávila, Sudha Balla, Sanguthevar Rajasekaran |
Fast and Practical Algorithms for Planted (l, d) Motif Search. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(4), pp. 544-552, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Planted motif search problem, challenging instances, exact algorithms, branch and bound algorithms |
39 | Michael A. Lones, Andy M. Tyrrell |
Regulatory Motif Discovery Using a Population Clustering Evolutionary Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(3), pp. 403-414, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
population-based data clustering, muscle-specific gene expression, Evolutionary computation, motif discovery, transcription factor binding sites |
39 | Piedachu Peris, Damián López, Marcelino Campos, José M. Sempere |
Protein Motif Prediction by Grammatical Inference. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICGI ![In: Grammatical Inference: Algorithms and Applications, 8th International Colloquium, ICGI 2006, Tokyo, Japan, September 20-22, 2006, Proceedings, pp. 175-187, 2006, Springer, 3-540-45264-8. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
protein motif location, bioinformatics, Grammatical inference |
39 | Michael A. Lones, Andrew M. Tyrrell |
The evolutionary computation approach to motif discovery in biological sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO Workshops ![In: Genetic and Evolutionary Computation Conference, GECCO 2005, Workshop Proceedings, Washington DC, USA, June 25-26, 2005, pp. 1-11, 2005, ACM. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
biological sequence understanding, evolutionary computation, motif discovery |
37 | Mehmet Kaya, Melikali Güç |
A Novel Approach to Extract Structured Motifs by Multi-Objective Genetic Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CBMS ![In: Proceedings of the Twenty-First IEEE International Symposium on Computer-Based Medical Systems, June 17-19, 2008, Jyväskylä, Finland, pp. 278-283, 2008, IEEE Computer Society, 978-0-7695-3165-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
structured motif discovery, multi-objective genetic algorithm |
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