Search results for "nucleosome"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
262	Guo-Cheng Yuan, Jun S. Liu	Statistial Analysis of nucleosome occupancy and histone modification data.	BIBE	2007	DBLP DOI BibTeX RDF
153	Li Wang, Amutha Ramaswamy, Ilya P. Ioshikhes	Global Dynamics of Nucleosome Arrays: Influence of Variant Histone H2A.Z.	BIBE	2005	DBLP DOI BibTeX RDF
109	Amin R. Mazloom, Kalyan Basu, Subhrangsu S. Mandal, Mehran Sorourian, Sajal K. Das 0001	DNA Sites Buried in Nucleosome Become Accessible at Room Temperature: A Discrete-Event-Simulation Based Modeling Approach.	ISBRA	2007	DBLP DOI BibTeX RDF
87	Leelavati Narlikar, Raluca Gordân, Alexander J. Hartemink	Nucleosome Occupancy Information Improves de novo Motif Discovery.	RECOMB	2007	DBLP DOI BibTeX RDF
65	Dang Hung Tran, Tho Hoan Pham, Kenji Satou, Tu Bao Ho	Conditional Random Fields for Predicting and Analyzing Histone Occupancy, Acetylation and Methylation Areas in DNA Sequences.	EvoWorkshops	2006	DBLP DOI BibTeX RDF	Histone proteins, acetylation, conditional random fields, methylation
58	Sheila M. Reynolds, Jeff A. Bilmes, William Stafford Noble	On the Relationship between DNA Periodicity and Local Chromatin Structure.	RECOMB	2009	DBLP DOI BibTeX RDF	DNA periodicity, nucleosome, dinucleotide, chromatin
44	Doo Yang, Ilya Ioshikhes	Drosophila H2A and H2A.Z Nucleosome Sequences Reveal Different Nucleosome Positioning Sequence Patterns.	J. Comput. Biol.	2017	DBLP DOI BibTeX RDF
44	Robert Schöpflin, Vladimir B. Teif, Oliver Müller, Christin Weinberg, Karsten Rippe, Gero Wedemann	Modeling nucleosome position distributions from experimental nucleosome positioning maps.	Bioinform.	2013	DBLP DOI BibTeX RDF
44	Tobias Warnecke, Erin A. Becker, Marc T. Facciotti, Corey Nislow, Ben Lehner	Conserved Substitution Patterns around Nucleosome Footprints in Eukaryotes and Archaea Derive from Frequent Nucleosome Repositioning through Evolution.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
44	Tali Raveh-Sadka, Michal Levo, Eran Segal	Incorporating Nucleosomes into Thermodynamic Models of Transcription Regulation.	RECOMB	2009	DBLP DOI BibTeX RDF
22	Wang Xu, Houfang Zhang, Wenhan Guo, Lijun Jiang, Yunjie Zhao, Yunhui Peng	Deciphering principles of nucleosome interactions and impact of cancer-associated mutations from comprehensive interaction network analysis.	Briefings Bioinform.	2024	DBLP DOI BibTeX RDF
22	Leo Zeitler, Kévin André, Adriana Alberti, Cyril Denby Wilkes, Julie Soutourina, Arach Goldar	A genome-wide comprehensive analysis of nucleosome positioning in yeast.	PLoS Comput. Biol.	2024	DBLP DOI BibTeX RDF
22	Ahtisham Fazeel, Areeb Agha, Andreas Dengel 0001, Sheraz Ahmed	NP-BERT: A Two-Staged BERT Based Nucleosome Positioning Prediction Architecture for Multiple Species.	BIOINFORMATICS	2023	DBLP DOI BibTeX RDF
22	Bingxiang Xu, Xiaoli Li, Xiaomeng Gao, Yan Jia, Jing Liu, Feifei Li, Zhihua Zhang	DeNOPA: decoding nucleosome positions sensitively with sparse ATAC-seq data.	Briefings Bioinform.	2022	DBLP DOI BibTeX RDF
22	Jianli Liu, Deliang Zhou, Wen Jin	Prediction of nucleosome dynamic interval based on long-short-term memory network (LSTM).	J. Bioinform. Comput. Biol.	2022	DBLP DOI BibTeX RDF
22	Robert C. Mines, Tomasz Lipniacki, Xiling Shen	Slow nucleosome dynamics set the transcriptional speed limit and induce RNA polymerase II traffic jams and bursts.	PLoS Comput. Biol.	2022	DBLP DOI BibTeX RDF
22	Mohamad Harastani	Image analysis methods development for in vitro and in situ cryo-electron tomography studies of conformational variability of biomolecular complexes : Case of nucleosome structural and dynamics studies. (Développement de méthodes d'analyse d'images pour les études in vitro et in situ de la variabilité conformationnelle des complexes biomoléculaires par cryo-tomographie électronique : cas d'études de la structure et de la dynamique des nucléosomes).		2022	RDF
22	Hiroaki Kato, Mitsuhiro Shimizu, Takeshi Urano	Chemical map-based prediction of nucleosome positioning using the Bioconductor package nuCpos.	BMC Bioinform.	2021	DBLP DOI BibTeX RDF
22	Guo-Sheng Han, Qi Li, Ying Li	Comparative analysis and prediction of nucleosome positioning using integrative feature representation and machine learning algorithms.	BMC Bioinform.	2021	DBLP DOI BibTeX RDF
22	Xiaolan Chen, Hui Yang, Guifen Liu, Yong Zhang 0006	NUCOME: A comprehensive database of nucleosome organization referenced landscapes in mammalian genomes.	BMC Bioinform.	2021	DBLP DOI BibTeX RDF
22	Kishan KC, Sridevi K. Subramanya, Rui Li 0002, Feng Cui	Machine learning predicts nucleosome binding modes of transcription factors.	BMC Bioinform.	2021	DBLP DOI BibTeX RDF
22	Mehrdad Oveisi, Manu Shukla, Nogayhan Seymen, Masae Ohno, Yuichi Taniguchi, Sunil Nahata, Remco Loos, Ghulam J. Mufti, Robin C. Allshire, Stefan Dimitrov, Mohammad M. Karimi	iNucs: inter-nucleosome interactions.	Bioinform.	2021	DBLP DOI BibTeX RDF
22	Parker Knight, Marie-Pierre L. Gauthier, Carolina E. Pardo, Russell P. Darst, Kevin Kapadia, Hadley Browder, Eliza Morton, Alberto Riva, Michael P. Kladde, Rhonda Bacher	Methylscaper: an R/Shiny app for joint visualization of DNA methylation and nucleosome occupancy in single-molecule and single-cell data.	Bioinform.	2021	DBLP DOI BibTeX RDF
22	Hungyo Kharerin, Lu Bai	Thermodynamic modeling of genome-wide nucleosome depleted regions in yeast.	PLoS Comput. Biol.	2021	DBLP DOI BibTeX RDF
22	Giovanni B. Brandani, Cheng Tan 0004, Shoji Takada	The kinetic landscape of nucleosome assembly: A coarse-grained molecular dynamics study.	PLoS Comput. Biol.	2021	DBLP DOI BibTeX RDF
22	Domenico Amato, Giosuè Lo Bosco, Riccardo Rizzo	CORENup: a combination of convolutional and recurrent deep neural networks for nucleosome positioning identification.	BMC Bioinform.	2020	DBLP DOI BibTeX RDF
22	Erinija Pranckeviciene, Sergey Hosid, Nathan Liang, Ilya Ioshikhes	Nucleosome positioning sequence patterns as packing or regulatory.	PLoS Comput. Biol.	2020	DBLP DOI BibTeX RDF
22	Shounak Chakraborty 0003, Stefan Canzar, Tobias Marschall, Marcel H. Schulz	Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data.	J. Comput. Biol.	2020	DBLP DOI BibTeX RDF
22	Fedor Pavlov, Maria Poptsova	Recognition of DNA Secondary Structures as Nucleosome Barriers with Deep Learning Methods.	BIBM	2020	DBLP DOI BibTeX RDF
22	Vladimir B. Teif, Christopher T. Clarkson	Nucleosome Positioning.	Encyclopedia of Bioinformatics and Computational Biology (2)	2019	DBLP DOI BibTeX RDF
22	Jiahao Xie, Yiran Cai, Huamei Li, Jiahui Wu, Xinlei Zhao, Kun Luo, Amit Sharma, Jianming Xie, Xiao Sun 0006, Hongde Liu	DNMHMM: An approach to identify the differential nucleosome regions in multiple cell types based on a Hidden Markov Model.	Biosyst.	2019	DBLP DOI BibTeX RDF
22	Ran Sun, Zilong Li, Thomas C. Bishop	TMB Library of Nucleosome Simulations.	J. Chem. Inf. Model.	2019	DBLP DOI BibTeX RDF
22	Raffaele Giancarlo, Simona E. Rombo, Filippo Utro	DNA combinatorial messages and Epigenomics: The case of chromatin organization and nucleosome occupancy in eukaryotic genomes.	Theor. Comput. Sci.	2019	DBLP DOI BibTeX RDF
22	Yongbing Zhao, Jinyue Wang, Fang Liang, Yanxia Liu, Qi Wang 0072, Hao Zhang, Meiye Jiang, Zhewen Zhang, Wenming Zhao, Yiming Bao, Zhang Zhang 0002, Jiayan Wu, Yan W. Asmann, Rujiao Li, Jing-Fa Xiao	NucMap: a database of genome-wide nucleosome positioning map across species.	Nucleic Acids Res.	2019	DBLP DOI BibTeX RDF
22	Rodrigo Santamaría, Roberto Therón, Laura Durán, Alicia García-Holgado, Sara González, Mar Sánchez, Francisco Antequera	Genome-wide search of nucleosome patterns using visual analytics.	Bioinform.	2019	DBLP DOI BibTeX RDF
22	Mengye Lu, Shuai Liu 0002	Nucleosome positioning based on generalized relative entropy.	Soft Comput.	2019	DBLP DOI BibTeX RDF
22	David F. Read, Kate Cook, Yang Young Lu, Karine G. Le Roch, William Stafford Noble	Predicting gene expression in the human malaria parasite Plasmodium falciparum using histone modification, nucleosome positioning, and 3D localization features.	PLoS Comput. Biol.	2019	DBLP DOI BibTeX RDF
22	Mengye Lu, Shuai Liu 0002, Arun Kumar Sangaiah, Yunpeng Zhou, Zheng Pan, Yongchun Zuo	Nucleosome Positioning With Fractal Entropy Increment of Diversity in Telemedicine.	IEEE Access	2018	DBLP DOI BibTeX RDF
22	Xiangfei Cheng, Yue Hou, Yumin Nie, Yiru Zhang, Huan Huang, Hongde Liu, Xiao Sun 0006	Nucleosome Positioning of Intronless Genes in the Human Genome.	IEEE ACM Trans. Comput. Biol. Bioinform.	2018	DBLP DOI BibTeX RDF
22	Mattia Antonino Di Gangi, Giosuè Lo Bosco, Riccardo Rizzo	Deep learning architectures for prediction of nucleosome positioning from sequences data.	BMC Bioinform.	2018	DBLP DOI BibTeX RDF
22	Juhua Zhang, Wenbo Peng, Lei Wang	LeNup: learning nucleosome positioning from DNA sequences with improved convolutional neural networks.	Bioinform.	2018	DBLP DOI BibTeX RDF
22	Fabrizio Cleri, Fabio Landuzzi, Ralf Blossey	Mechanical evolution of DNA double-strand breaks in the nucleosome.	PLoS Comput. Biol.	2018	DBLP DOI BibTeX RDF
22	Weizhong Chen, Yi Liu, Shanshan Zhu, Guoyu Chen, Jing-Dong J. Han	Inter-nucleosomal communication between histone modifications for nucleosome phasing.	PLoS Comput. Biol.	2018	DBLP DOI BibTeX RDF
22	Fangjie Zhu, Lucas Farnung, Eevi Kaasinen, Biswajyoti Sahu, Yimeng Yin, Bei Wei, Svetlana O. Dodonova, Kazuhiro R. Nitta, Ekaterina Morgunova, Minna Taipale, Patrick Cramer, Jussi Taipale	The interaction landscape between transcription factors and the nucleosome.	Nat.	2018	DBLP DOI BibTeX RDF
22	Shounak Chakraborty 0003, Stefan Canzar, Tobias Marschall, Marcel H. Schulz	Chromatyping: Reconstructing Nucleosome Profiles from NOMe Sequencing Data.	RECOMB	2018	DBLP DOI BibTeX RDF
22	Domenico Amato, Mattia Antonino Di Gangi, Giosuè Lo Bosco, Riccardo Rizzo	Recurrent Deep Neural Networks for Nucleosome Classification.	CIBB	2018	DBLP DOI BibTeX RDF
22	Elen Tevanyan, Maria Poptsova	Recognizing Patterns of Nucleosome and DNA Structures Positioning.	BIBM	2018	DBLP DOI BibTeX RDF
22	Giosuè Lo Bosco, Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso	Variable Ranking Feature Selection for the Identification of Nucleosome Related Sequences.	ADBIS (Short Papers and Workshops)	2018	DBLP DOI BibTeX RDF
22	Marco Tompitak, Gerard T. Barkema, Helmut Schiessel	Benchmarking and refining probability-based models for nucleosome-DNA interaction.	BMC Bioinform.	2017	DBLP DOI BibTeX RDF
22	Akinori Awazu	Prediction of nucleosome positioning by the incorporation of frequencies and distributions of three different nucleotide segment lengths into a general pseudo k-tuple nucleotide composition.	Bioinform.	2017	DBLP DOI BibTeX RDF
22	Yongjun Piao, Seongkeon Lee, Eun-Joon Lee, Keith D. Robertson, Huidong Shi	CAME: identification of chromatin accessibility from nucleosome occupancy and methylome sequencing.	Bioinform.	2017	DBLP DOI BibTeX RDF
22	Hector Zenil, Peter Minary	DNA Sequence Complexity Reveals Structure Beyond GC Content in Nucleosome Occupancy.	CoRR	2017	DBLP BibTeX RDF
22	Toru Niina, Giovanni B. Brandani, Cheng Tan 0004, Shoji Takada	Sequence-dependent nucleosome sliding in rotation-coupled and uncoupled modes revealed by molecular simulations.	PLoS Comput. Biol.	2017	DBLP DOI BibTeX RDF
22	Mattia Antonino Di Gangi, Salvatore Gaglio, Claudio La Bua, Giosuè Lo Bosco, Riccardo Rizzo	A Deep Learning Network for Exploiting Positional Information in Nucleosome Related Sequences.	IWBBIO (2)	2017	DBLP DOI BibTeX RDF
22	Vladimir B. Teif	Nucleosome positioning: resources and tools online.	Briefings Bioinform.	2016	DBLP DOI BibTeX RDF
22	Yun Lu, Yanglan Gan, Jihong Guan, Shuigeng Zhou	An integrative analysis of nucleosome occupancy and positioning using diverse sequence dependent properties.	Neurocomputing	2016	DBLP DOI BibTeX RDF
22	Filippo Utro, Valeria Di Benedetto, Davide F. V. Corona, Raffaele Giancarlo	The intrinsic combinatorial organization and information theoretic content of a sequence are correlated to the DNA encoded nucleosome organization of eukaryotic genomes.	Bioinform.	2016	DBLP DOI BibTeX RDF
22	Soya Shinkai, Tadasu Nozaki, Kazuhiro Maeshima, Yuichi Togashi	Dynamic Nucleosome Movement Provides Structural Information of Topological Chromatin Domains in Living Human Cells.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
22	Andrew Wight, Doo Yang, Ilya Ioshikhes, Andrew P. Makrigiannis	Nucleosome Presence at AML-1 Binding Sites Inversely Correlates with Ly49 Expression: Revelations from an Informatics Analysis of Nucleosomes and Immune Cell Transcription Factors.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
22	Jinzen Ikebe, Shun Sakuraba, Hidetoshi Kono	H3 Histone Tail Conformation within the Nucleosome and the Impact of K14 Acetylation Studied Using Enhanced Sampling Simulation.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
22	René Dreos, Giovanna Ambrosini, Philipp Bucher	Influence of Rotational Nucleosome Positioning on Transcription Start Site Selection in Animal Promoters.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
22	Rabeb Touati, Imen Massaoudi, Afef Elloumi Oueslati, Zied Lachiri, Noureddine Ellouze	Nucleosome location method based on morlet wavelet analysis scalograms investigation.	ATSIP	2016	DBLP DOI BibTeX RDF
22	Yanning Cai	Nucleosome positioning determinants for distinct human genomic features.	CISP-BMEI	2016	DBLP DOI BibTeX RDF
22	Huidong Chen, Jihong Guan, Shuigeng Zhou	DPNuc: Identifying Nucleosome Positions Based on the Dirichlet Process Mixture Model.	IEEE ACM Trans. Comput. Biol. Bioinform.	2015	DBLP DOI BibTeX RDF
22	Luis Quintales, Enrique Vázquez, Francisco Antequera	Comparative analysis of methods for genome-wide nucleosome cartography.	Briefings Bioinform.	2015	DBLP DOI BibTeX RDF
22	Raffaele Giancarlo, Simona E. Rombo, Filippo Utro	Epigenomic k-mer dictionaries: shedding light on how sequence composition influences in vivo nucleosome positioning.	Bioinform.	2015	DBLP DOI BibTeX RDF
22	Hiroo Kenzaki, Shoji Takada	Partial Unwrapping and Histone Tail Dynamics in Nucleosome Revealed by Coarse-Grained Molecular Simulations.	PLoS Comput. Biol.	2015	DBLP DOI BibTeX RDF
22	Giosuè Lo Bosco	Alignment Free Dissimilarities for Nucleosome Classification.	CIBB	2015	DBLP DOI BibTeX RDF
22	Bader A. Alharbi, Thamir H. Alshammari, Nathan L. Felton, Victor B. Zhurkin, Feng Cui	nuMap: A Web Platform for Accurate Prediction of Nucleosome Positioning.	Genom. Proteom. Bioinform.	2014	DBLP DOI BibTeX RDF
22	Yanglan Gan, Guobing Zou, Jihong Guan, Guangwei Xu	A Novel Wavelet-Based Approach for Predicting Nucleosome Positions Using DNAS tructural Information.	IEEE ACM Trans. Comput. Biol. Bioinform.	2014	DBLP DOI BibTeX RDF
22	Feng Cui, Linlin Chen, Peter R. LoVerso, Victor B. Zhurkin	Prediction of nucleosome rotational positioning in yeast and human genomes based on sequence-dependent DNA anisotropy.	BMC Bioinform.	2014	DBLP DOI BibTeX RDF
22	Anton Polishko, Evelien M. Bunnik, Karine G. Le Roch, Stefano Lonardi	PuFFIN - a parameter-free method to build nucleosome maps from paired-end reads.	BMC Bioinform.	2014	DBLP DOI BibTeX RDF
22	Hui Liu 0026, Ruichang Zhang, Wei Xiong, Jihong Guan, Ziheng Zhuang, Shuigeng Zhou	A comparative evaluation on prediction methods of nucleosome positioning.	Briefings Bioinform.	2014	DBLP DOI BibTeX RDF
22	Jung-Hsien Chiang, Chan-Hsien Lin	NCS: incorporating positioning data to quantify nucleosome stability in yeast.	Bioinform.	2014	DBLP DOI BibTeX RDF
22	Shou-Hui Guo, En-Ze Deng, Liqin Xu, Hui Ding 0005, Hao Lin 0001, Wei Chen 0064, Kuo-Chen Chou	iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition.	Bioinform.	2014	DBLP DOI BibTeX RDF
22	Daria A. Beshnova, Andrey G. Cherstvy, Yevhen Vainshtein, Vladimir B. Teif	Regulation of the Nucleosome Repeat Length In Vivo by the DNA Sequence, Protein Concentrations and Long-Range Interactions.	PLoS Comput. Biol.	2014	DBLP DOI BibTeX RDF
22	Xing Huang, Jiajun Wang, Hong Yan 0001	Genome-wide nucleosome detection based on the dinucleotide position frequencies.	Int. J. Data Min. Bioinform.	2014	DBLP DOI BibTeX RDF
22	René Dreos, Giovanna Ambrosini, Philipp Bucher	Transcription factor binding and nucleosome positioning are alternative pathways for transcription start site selection in eukaryotic promoters.	IWBBIO	2014	DBLP BibTeX RDF
22	Anton Polishko	Computational Methods for Exploring Nucleosome Dynamics.		2014	RDF
22	Jeremie Becker, Christopher Yau, John M. Hancock, Christopher C. Holmes	NucleoFinder: a statistical approach for the detection of nucleosome positions.	Bioinform.	2013	DBLP DOI BibTeX RDF
22	Sangsoon Woo, Xuekui Zhang, Renan Sauteraud, François Robert 0001, Raphael Gottardo	PING 2.0: an R/Bioconductor package for nucleosome positioning using next-generation sequencing data.	Bioinform.	2013	DBLP DOI BibTeX RDF
22	Alessandro Mammana, Martin Vingron, Ho-Ryun Chung	Inferring nucleosome positions with their histone mark annotation from ChIP data.	Bioinform.	2013	DBLP DOI BibTeX RDF
22	Guillem Portella, Federica Battistini, Modesto Orozco	Understanding the Connection between Epigenetic DNA Methylation and Nucleosome Positioning from Computer Simulations.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
22	Evgeniy A. Ozonov, Erik van Nimwegen	Nucleosome Free Regions in Yeast Promoters Result from Competitive Binding of Transcription Factors That Interact with Chromatin Modifiers.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
22	Bich Hai Ho, Ngoc Tu Le, Tu Bao Ho	Quantitatively assessing the effects of regulatory factors on nucleosome dynamics by multiple kernel learning.	J. Ambient Intell. Humaniz. Comput.	2012	DBLP DOI BibTeX RDF
22	Huan Huang, Shuangxin Yu, Hongde Liu, Xiao Sun 0006	Nucleosome organization in sequences of alternative events in human genome.	Biosyst.	2012	DBLP DOI BibTeX RDF
22	Yanglan Gan, Jihong Guan, Shuigeng Zhou, Weixiong Zhang	Structural features based genome-wide characterization and prediction of nucleosome organization.	BMC Bioinform.	2012	DBLP DOI BibTeX RDF
22	Zhiming Dai, Xianhua Dai	Antisense transcription is coupled to nucleosome occupancy in sense promoters.	Bioinform.	2012	DBLP DOI BibTeX RDF
22	Kai Fu, Qianzi Tang, Jianxing Feng, Xiaole Shirley Liu, Yong Zhang 0006	DiNuP: a systematic approach to identify regions of differential nucleosome positioning.	Bioinform.	2012	DBLP DOI BibTeX RDF
22	Anton Polishko, Nadia Ponts, Karine G. Le Roch, Stefano Lonardi	NOrMAL: accurate nucleosome positioning using a modified Gaussian mixture model.	Bioinform.	2012	DBLP DOI BibTeX RDF
22	Bich Hai Ho, Ngoc Tu Le, Tu Bao Ho	Bayesian Network Analysis of Relationships between Nucleosome Dynamics and Transcriptional Regulatory Factors.	BIOINFORMATICS	2012	DBLP BibTeX RDF
22	Tonglaga Bao, Hong Li, Xiaoqing Zhao	Distribution of nucleosome binding motifs around the functional sites of human housekeeping genes.	BMEI	2012	DBLP DOI BibTeX RDF
22	Yu Zhang, Xiuwen Liu, Jonathan H. Dennis	Quantitative models for statistical nucleosome occupancy prediction.	BIBM Workshops	2012	DBLP DOI BibTeX RDF
22	Teng L. Liu, Yu Zhang, Jonathan H. Dennis	Joint clustering and alignment for nucleosome occupancy analysis.	BIBM Workshops	2012	DBLP DOI BibTeX RDF
22	Hongde Liu, Shuhai Lin, Zongwei Cai, Xiao Sun 0006	Role of 10-11 bp periodicities of eukaryotic DNA sequence in nucleosome positioning.	Biosyst.	2011	DBLP DOI BibTeX RDF
22	Clifford A. Meyer, Housheng H. He, Myles Brown, Xiaole Shirley Liu	BINOCh: binding inference from nucleosome occupancy changes.	Bioinform.	2011	DBLP DOI BibTeX RDF
22	Zhiming Dai, Xianhua Dai, Qian Xiang	Genome-wide DNA sequence polymorphisms facilitate nucleosome positioning in yeast.	Bioinform.	2011	DBLP DOI BibTeX RDF
22	Oscar Flores, Modesto Orozco	nucleR: a package for non-parametric nucleosome positioning.	Bioinform.	2011	DBLP DOI BibTeX RDF
22	Mithun Biswas, Karine Voltz, Jeremy C. Smith, Jörg Langowski	Role of Histone Tails in Structural Stability of the Nucleosome.	PLoS Comput. Biol.	2011	DBLP DOI BibTeX RDF
22	Debby Dan Wang, Hong Yan 0001	Analysis of nucleosome structures based on molecular dynamics.	SMC	2011	DBLP DOI BibTeX RDF