Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
111 | Hong Bi, Junghuei Chen, Russell J. Deaton, Max H. Garzon, Harvey Rubin, David Harlan Wood |
In vitro selection of non-crosshybridizing oligonucleotides for computation. |
Nat. Comput. |
2003 |
DBLP DOI BibTeX RDF |
word design, DNA computing |
111 | Russell J. Deaton, Junghuei Chen, Hong Bi, Max H. Garzon, Harvey Rubin, David Harlan Wood |
A PCR-based Protocol for In Vitro Selection of Non-crosshybridizing Oligonucleotides. |
DNA |
2002 |
DBLP DOI BibTeX RDF |
|
77 | Russell J. Deaton, Junghuei Chen, Jin Woo Kim, Max H. Garzon, David Harlan Wood |
Test Tube Selection of Large Independent Sets of DNA Oligonucleotides. |
Nanotechnology: Science and Computation |
2006 |
DBLP DOI BibTeX RDF |
|
77 | Russell J. Deaton, Junghuei Chen, Hong Bi, John A. Rose |
A Software Tool for Generating Non-crosshybridizing Libraries of DNA Oligonucleotides. |
DNA |
2002 |
DBLP DOI BibTeX RDF |
|
69 | Clint Morgan, Darko Stefanovic, Cristopher Moore, Milan N. Stojanovic |
Building the Components for a Biomolecular Computer. |
DNA |
2004 |
DBLP DOI BibTeX RDF |
|
52 | Alexander Schliep, Roland Krause |
Efficient Algorithms for the Computational Design of Optimal Tiling Arrays. |
IEEE ACM Trans. Comput. Biol. Bioinform. |
2008 |
DBLP DOI BibTeX RDF |
Graph Theory, Biology and genetics |
52 | Zuwairie Ibrahim, Tri Basuki Kurniawan, Marzuki Khalid |
A DNA sequence design for molecular computation of HPP with output visualization based on real-time PCR. |
IEEE Congress on Evolutionary Computation |
2007 |
DBLP DOI BibTeX RDF |
|
52 | Zuwairie Ibrahim, Yusei Tsuboi, Osamu Ono, Marzuki Khalid |
Improving Initial Pool Generation of Direct-Proportional Length-Based DNA Computing by Parallel Overlap Assembly. |
WSTST |
2005 |
DBLP DOI BibTeX RDF |
|
42 | Junghuei Chen, Russell J. Deaton, Max H. Garzon, Jin Woo Kim, David Harlan Wood, Hong Bi, Dylan Carpenter, Yu-Zhen Wang |
Characterization of Non-crosshybridizing DNA Oligonucleotides Manufactured in vitro. |
Nat. Comput. |
2006 |
DBLP DOI BibTeX RDF |
melting temperature, word design, nanotechnology, DNA computing |
42 | Junghuei Chen, Russell J. Deaton, Max H. Garzon, Jin Woo Kim, David Harlan Wood, Hong Bi, Dylan Carpenter, Yu-Zhen Wang |
Characterization of Non-crosshybridizing DNA Oligonucleotides Manufactured In Vitro. |
DNA |
2004 |
DBLP DOI BibTeX RDF |
|
36 | Dimitris Margaritis 0001, Steven Skiena |
Reconstructing Strings from Substrings in Rounds. |
FOCS |
1995 |
DBLP DOI BibTeX RDF |
string reconstruction, combinatorial bounds, substring queries, sequencing by hybridization, oligonucleotides, de novo sequencing, large DNA fragments, SBH, interaction, parallelism, pattern matching, string matching, DNA, biology computing, rounds, substrings |
35 | Max H. Garzon, Tit-Yee Wong, Vinhthuy T. Phan |
DNA Chips for Species Identification and Biological Phylogenies. |
DNA |
2009 |
DBLP DOI BibTeX RDF |
DNA codeword design, noncrosshybridizing oligonucleotide bases, genomic signatures, DNA chips, 16S rRNA tree of life, phylogenetic analysis |
35 | Yeow Meng Chee, San Ling |
Improved Lower Bounds for Constant GC-Content DNA Codes. |
IEEE Trans. Inf. Theory |
2008 |
DBLP DOI BibTeX RDF |
|
35 | Qinru Qiu, Prakash Mukre, Morgan Bishop, Daniel J. Burns, Qing Wu 0002 |
Hardware Acceleration for Thermodynamic Constrained DNA Code Generation. |
DNA |
2007 |
DBLP DOI BibTeX RDF |
|
35 | Alexander Schliep, Roland Krause |
Efficient Computational Design of Tiling Arrays Using a Shortest Path Approach. |
WABI |
2007 |
DBLP DOI BibTeX RDF |
|
35 | Zuwairie Ibrahim, Yusei Tsuboi, Mohd Saufee Muhammad, Osamu Ono, Marzuki Khalid |
DNA implementation of k-shortest paths computation. |
Congress on Evolutionary Computation |
2005 |
DBLP DOI BibTeX RDF |
|
25 | Payam Kelich, Huanhuan Zhao, Jose R. Orona, Lela Vukovic |
BinderSpace: A package for sequence space analyses for datasets of affinity-selected oligonucleotides and peptide-based molecules. |
J. Comput. Chem. |
2023 |
DBLP DOI BibTeX RDF |
|
25 | Thomas Binet, Séverine Padiolleau-Lefèvre, Stéphane Octave, Bérangère Avalle, Irene Maffucci |
Comparative Study of Single-stranded Oligonucleotides Secondary Structure Prediction Tools. |
BMC Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
25 | Thomas Binet, Bérangère Avalle, Miraine Dávila Felipe, Irene Maffucci |
AptaMat: a matrix-based algorithm to compare single-stranded oligonucleotides secondary structures. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
25 | Shuntaro Chiba, Kenji Rowel Q. Lim, Narin Sheri, Saeed Anwar, Esra Erkut, Md Nur Ahad Shah, Tejal Aslesh, Stanley Woo, Omar Sheikh, Rika Maruyama, Hiroaki Takano, Katsuhiko Kunitake, William Duddy, Yasushi Okuno, Yoshitsugu Aoki, Toshifumi Yokota |
eSkip-Finder: a machine learning-based web application and database to identify the optimal sequences of antisense oligonucleotides for exon skipping. |
Nucleic Acids Res. |
2021 |
DBLP DOI BibTeX RDF |
|
25 | Cheryl M. Armstrong, Joe Lee, Andrew G. Gehring, Joseph A. Capobianco |
Flow-Through Electrochemical Biosensor for the Detection of Listeria monocytogenes Using Oligonucleotides. |
Sensors |
2021 |
DBLP DOI BibTeX RDF |
|
25 | Pushkala Jayaraman, Timothy Mosbruger, Taishan Hu, Nikolaos G. Tairis, Chao Wu, Peter M. Clark, Monica D'arcy, Deborah Ferriola, Katarzyna Mackiewicz, Xiaowu Gai, Dimitrios Monos, Mahdi Sarmady |
AnthOligo: automating the design of oligonucleotides for capture/enrichment technologies. |
Bioinform. |
2020 |
DBLP DOI BibTeX RDF |
|
25 | Nor Diyana Md. Sani, Eda Yuhana Ariffin, Wong Sheryn, Mohd Asyraf Shamsuddin, Lee Yook Heng, Jalifah Latip, Siti Aishah Hasbullah, Nurul Izzaty Hassan |
An Electrochemical DNA Biosensor for Carcinogenicity of Anticancer Compounds Based on Competition between Methylene Blue and Oligonucleotides. |
Sensors |
2019 |
DBLP DOI BibTeX RDF |
|
25 | Marek C. Milewski, Karol Kamel, Anna Kurzynska-Kokorniak, Marcin K. Chmielewski, Marek Figlerowicz |
EvOligo: A Novel Software to Design and Group Libraries of Oligonucleotides Applicable for Nucleic Acid-Based Experiments. |
J. Comput. Biol. |
2017 |
DBLP DOI BibTeX RDF |
|
25 | Eberhard Schmitt, Jenny Wagner, Michael Hausmann |
Combinatorial selection of short triplex forming oligonucleotides for fluorescence in situ hybridisation COMBO-FISH. |
J. Comput. Sci. |
2012 |
DBLP DOI BibTeX RDF |
|
25 | Nathan L. Clement, Quinn Snell, Mark J. Clement, Peter C. Hollenhorst, Jahnvi Purwar, Barbara J. Graves, Bradley R. Cairns, W. Evan Johnson |
The GNUMAP algorithm: unbiased probabilistic mapping of oligonucleotides from next-generation sequencing. |
Bioinform. |
2010 |
DBLP DOI BibTeX RDF |
|
25 | G. Golfier, Sophie Lemoine, A. van Miltenberg, A. Bendjoudi, J. Rossier, Stéphane Le Crom, Marie-Claude Potier |
Selection of oligonucleotides for whole-genome microarrays with semi-automatic update. |
Bioinform. |
2009 |
DBLP DOI BibTeX RDF |
|
25 | You Jung Kim, Nikhil Teletia, Victor Ruotti, Christopher A. Maher, Arul M. Chinnaiyan, Ron M. Stewart, James A. Thomson, Jignesh M. Patel |
ProbeMatch: rapid alignment of oligonucleotides to genome allowing both gaps and mismatches. |
Bioinform. |
2009 |
DBLP DOI BibTeX RDF |
|
25 | Zehra Banu Bahsi, Aligül Büyükaksoy, Sinan Mert Ölmezcan, Fethi Simsek, Muhammed Hasan Aslan, Ahmet Yavuz Oral |
A Novel Label-Free Optical Biosensor Using Synthetic Oligonucleotides from E. coli O157: H7: Elementary Sensitivity Tests. |
Sensors |
2009 |
DBLP DOI BibTeX RDF |
|
25 | Olivier Croce, François Chevenet, Richard Christen |
OligoHeatMap (OHM): an online tool to estimate and display hybridizations of oligonucleotides onto DNA sequences. |
Nucleic Acids Res. |
2008 |
DBLP DOI BibTeX RDF |
|
25 | Hui Jiang 0002, Wing Hung Wong |
SeqMap: mapping massive amount of oligonucleotides to the genome. |
Bioinform. |
2008 |
DBLP DOI BibTeX RDF |
|
25 | Guangan Hu, Manuel Llinás, Jingguang Li, Peter Rainer Preiser, Zbynek Bozdech |
Selection of long oligonucleotides for gene expression microarrays using weighted rank-sum strategy. |
BMC Bioinform. |
2007 |
DBLP DOI BibTeX RDF |
|
25 | Chun-Chi Liu, Chin-Chung Lin, Ker-Chau Li, Wen-Shyen E. Chen, Jiun-Ching Chen, Ming-Te Yang, Pan-Chyr Yang, Pei-Chun Chang, Jeremy J. W. Chen |
Genome-wide identification of specific oligonucleotides using artificial neural network and computational genomic analysis. |
BMC Bioinform. |
2007 |
DBLP DOI BibTeX RDF |
|
25 | Wei Li 0036, Jason S. Carroll, Myles Brown, Xiaole Shirley Liu |
xMAN: extreme MApping of oligoNucleotides. |
BIOCOMP |
2007 |
DBLP BibTeX RDF |
|
25 | Xiaochen Bo, Shaoke Lou, Daochun Sun, Wenjie Shu, Jing Yang, Shengqi Wang |
Selection of antisense oligonucleotides based on multiple predicted target mRNA structures. |
BMC Bioinform. |
2006 |
DBLP DOI BibTeX RDF |
|
25 | Xiaochen Bo, Shaoke Lou, Daochun Sun, Jing Yang, Shengqi Wang |
AOBase: a database for antisense oligonucleotides selection and design. |
Nucleic Acids Res. |
2006 |
DBLP DOI BibTeX RDF |
|
25 | Eric K. Nordberg |
YODA: selecting signature oligonucleotides. |
Bioinform. |
2005 |
DBLP DOI BibTeX RDF |
|
25 | Heikki Hyyrö, Martti Juhola, Mauno Vihinen |
On exact string matching of unique oligonucleotides. |
Comput. Biol. Medicine |
2005 |
DBLP DOI BibTeX RDF |
|
25 | Olga V. Matveeva, Brian T. Foley, Vladimir A. Nemtsov, Raymond F. Gesteland, Senya Matsufuji, John F. Atkins, Aleksey Y. Ogurtsov, Svetlana A. Shabalina |
Identification of regions in multiple sequence alignments thermodynamically suitable for targeting by consensus oligonucleotides: application to HIV genome. |
BMC Bioinform. |
2004 |
DBLP DOI BibTeX RDF |
|
25 | Pål Sætrom |
Predicting the efficacy of short oligonucleotides in antisense and RNAi experiments with boosted genetic programming. |
Bioinform. |
2004 |
DBLP DOI BibTeX RDF |
|
25 | Henrik Hornshøj, Henrik Stengaard, Frank Panitz, Christian Bendixen |
SEPON, a Selection and Evaluation Pipeline for OligoNucleotides based on ESTs with a non-target Tm algorithm for reducing cross-hybridization in microarray gene expression experiments. |
Bioinform. |
2004 |
DBLP DOI BibTeX RDF |
|
25 | Sven Rahmann, Christine Gräfe |
Mean and variance of the Gibbs free energy of oligonucleotides in the nearest neighbor model under varying conditions. |
Bioinform. |
2004 |
DBLP DOI BibTeX RDF |
|
25 | J. Zillies, C. Coester |
A New Delivery System for Double Stranded siRNA Oligonucleotides Based on Gelatin Nanoparticles. |
ICMENS |
2004 |
DBLP DOI BibTeX RDF |
|
25 | Henrik Bjørn Nielsen, Rasmus Wernersson, Steen Knudsen |
Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays. |
Nucleic Acids Res. |
2003 |
DBLP DOI BibTeX RDF |
|
25 | Liaofu Luo, Li-Ching Hsieh, Fengmin Ji, Mengwen Jia, H. C. Lee |
Search for Evolution-Related-Oligonucleotides and Conservative Words in rRNA Sequences. |
CSB |
2003 |
DBLP DOI BibTeX RDF |
|
25 | Hao Chen 0007, Burt M. Sharp |
Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3' untranslated region. |
BMC Bioinform. |
2002 |
DBLP DOI BibTeX RDF |
|
25 | Kenji Onodera, Ulrich Melcher |
VirOligo: a database of virus-specific oligonucleotides. |
Nucleic Acids Res. |
2002 |
DBLP DOI BibTeX RDF |
|
25 | Zhengdong Zhang, Richard C. Willson, George E. Fox |
Identification of characteristic oligonucleotides in the bacterial 16S ribosomal RNA sequence dataset. |
Bioinform. |
2002 |
DBLP DOI BibTeX RDF |
|
25 | Lars Kaderali, Alexander Schliep |
Selecting signature oligonucleotides to identify organisms using DNA arrays. |
Bioinform. |
2002 |
DBLP DOI BibTeX RDF |
|
25 | Rosel Kretschmer-Kazemi Far, Wolfgang Nedbal, Georg Sczakiel |
Concepts to automate the theoretical design of effective antisense oligonucleotides. |
Bioinform. |
2001 |
DBLP DOI BibTeX RDF |
|
25 | Jeff Elhai |
Determination of Bias in the Relative Abundance of Oligonucleotides in DNA Sequences. |
J. Comput. Biol. |
2001 |
DBLP DOI BibTeX RDF |
|
25 | Heikki Hyyrö, Mauno Vihinen, Martti Juhola |
On Approximate String Matching of Unique Oligonucleotides. |
MedInfo |
2001 |
DBLP DOI BibTeX RDF |
|
25 | Heikki Hyyrö |
On Using Two-Phase Filtering in Indexed Approximate String Matching with Application to Searching Unique Oligonucleotides. |
SPIRE |
2001 |
DBLP DOI BibTeX RDF |
|
25 | Alain Denise, Mireille Régnier, Mathias Vandenbogaert |
Assessing the Statistical Significance of Overrepresented Oligonucleotides. |
WABI |
2001 |
DBLP DOI BibTeX RDF |
|
25 | Amy M. Diegelman, Eric T. Kool |
Generation of circular RNAs and trans-cleaving catalytic RNAs by rolling transcription of circular DNA oligonucleotides encoding hairpin ribozymes. |
Nucleic Acids Res. |
1998 |
DBLP DOI BibTeX RDF |
|
25 | Irina Afonina, Maris Zivarts, Igor Kutyavin, Eugeny Lukhtanov, Howard Gamper, Rich B. Meyer |
Efficient priming of PCR with short oligonucleotides conjugated to a minor groove binder. |
Nucleic Acids Res. |
1997 |
DBLP DOI BibTeX RDF |
|
25 | Chin-Yi Huang, Guixia Bi, Paul S. Miller |
Triplex formation by oligonucleotides containing novel deoxycytidine derivatives [published erratum appears in Nucleic Acids Res 1997 Sep 15;25(18): following 3750]. |
Nucleic Acids Res. |
1996 |
DBLP DOI BibTeX RDF |
|
25 | Alexander E. Kel, M. Philipenko, Vladimir N. Babenko, Nikolay A. Kolchanov |
Genetic Algorithm for Selection of Oligonucleotides for Identification by Hybridisation of Genomic DNA Fragments Possessing Gene Potential. |
German Conference on Bioinformatics |
1996 |
DBLP BibTeX RDF |
|
25 | Frank Seela, Yaoming Chen |
Oligonucleotides containing fluorescent 2'-deoxyisoinosine: solid-phase synthesis and duplex stability. |
Nucleic Acids Res. |
1995 |
DBLP DOI BibTeX RDF |
|
25 | Suzanne M. Cutts, Don R. Phillips |
Use of oligonucleotides to define the site of interstrand cross-links induced by Adriamycin. |
Nucleic Acids Res. |
1995 |
DBLP DOI BibTeX RDF |
|
25 | Mahmoud Ghomi, Jean-Marc Victor, Charles Henriet |
Monte Carlo Simulations on Short Single-Stranded Oligonucleotides. I. Application to RNA Trimers. |
J. Comput. Chem. |
1994 |
DBLP DOI BibTeX RDF |
|
25 | Osmar Norberto de Souza, Julia M. Goodfellow |
Molecular dynamics simulations of oligonucleotides in solution: Visualisation of intrinsic curvature. |
J. Comput. Aided Mol. Des. |
1994 |
DBLP DOI BibTeX RDF |
|
25 | Marek Kwiatkowski, Martina Samiotaki, Urpo Lamminmäki, Veli-Matti Mukkala, Ulf Landegren |
Solid-phase synthesis of chelate-labelled oligonucleotides: application in triple-color ligase-mediated gene analysis. |
Nucleic Acids Res. |
1994 |
DBLP DOI BibTeX RDF |
|
25 | Hui-Hsien Chou, James A. Reggia, Rafael Navarro-Gonzalez, Jayoung Wu |
An Extended Cellular Space Method for Simulating Autocatalytic Oligonucleotides. |
Comput. Chem. |
1994 |
DBLP DOI BibTeX RDF |
|
25 | Paolo Romano 0001, Ottavia Aresu, Barbara Parodi, Maria Assunta Manniello, Maria Giuseppina Campi, Giovanna Angelini, Massimo Romani, Beatrice Iannotta, Gabriella Rondanina, Tiziana Ruzzon, Leonardo Santi |
Molecular Probe Data Base: a database on synthetic oligonucleotides. |
Nucleic Acids Res. |
1993 |
DBLP DOI BibTeX RDF |
|
25 | Calum MacKellar, Duncan Graham, David W. Will, Stephen Burgess, Tom Brown |
Synthesis and physical properties of anti-HIV antisense oligonucleotides bearing terminal lipophilic groups. |
Nucleic Acids Res. |
1992 |
DBLP DOI BibTeX RDF |
|
25 | Sergei M. Gryaznov, Robert L. Letsinger |
Synthesis and properties of oligonucleotides containing aminodeoxythymidine units. |
Nucleic Acids Res. |
1992 |
DBLP DOI BibTeX RDF |
|
25 | Barry Milavetz |
Preparation of nested deletions in single-strand DNA using oligonucleotides containing partially random base sequences. |
Nucleic Acids Res. |
1992 |
DBLP DOI BibTeX RDF |
|
25 | Andreas Ultsch, Christoph Maria Schuster, Heinrich Betz, William Wisden |
In situ hybridization with oligonucleotides: a simplified method to detect Drosophila transcripts. |
Nucleic Acids Res. |
1991 |
DBLP DOI BibTeX RDF |
|
25 | A. David Adams, C. R. Petrie, Rich B. Meyer Jr. |
Preparation and hybridization properties of oligonucleotides containing 1-alpha-D-arabinofuranosylthymine. |
Nucleic Acids Res. |
1991 |
DBLP DOI BibTeX RDF |
|
25 | D. Nizetic, R. Drmanac, Hans Lehrach |
An improved bacterial colony lysis procedure enables direct DNA hybridisation using short (10, 11 bases) oligonucleotides to cosmids. |
Nucleic Acids Res. |
1991 |
DBLP DOI BibTeX RDF |
|
25 | Hitoshi Ueda, Susumu Hirose |
Defining the sequence recognized with BmFTZ-F1, a sequence specific DNA binding factor in the silkworm, Bombyx mori, as revealed by direct sequencing of bound oligonucleotides and gel mobility shift competition analysis. |
Nucleic Acids Res. |
1991 |
DBLP DOI BibTeX RDF |
|
25 | K. Lucas, M. Busch, S. Mossinger, J. A. Thompson |
An improved microcomputer program for finding gene- or gene family-specific oligonucleotides suitable as primers for polymerase chain reactions or as probes. |
Comput. Appl. Biosci. |
1991 |
DBLP DOI BibTeX RDF |
|
25 | Takeshi Sakata, Hidekazu Hiroaki, Yasushi Oda, Toshiki Tanaka, Morio Ikehara, Seiichi Uesugi |
Studies on the structure and stabilizing factor of the CUUCGG hairpin RNA using chemically synthesized oligonucleotides. |
Nucleic Acids Res. |
1990 |
DBLP DOI BibTeX RDF |
|
25 | Prescilla E. Gonzaga, Linda Harris, Geoffrey P. Margison, Thomas P. Brent |
Evidence that covalent complex formation between BCNU-treated oligonucleotides and E. coli alkyltransferases requires the O6- alkylguanine function. |
Nucleic Acids Res. |
1990 |
DBLP DOI BibTeX RDF |
|
25 | Stefano Volinia, Roberto Gambari, F. Bernardi, Italo Barrai |
The frequency of oligonucleotides in mammalian genic regions. |
Comput. Appl. Biosci. |
1989 |
DBLP DOI BibTeX RDF |
|
25 | J. C. Edman, M. E. Evans-Holm, J. E. Marich, J. L. Ruth |
Rapid DNA fingerprinting using alkaline phosphatase-conjugated oligonucleotides. |
Nucleic Acids Res. |
1988 |
DBLP DOI BibTeX RDF |
|
25 | Soumitra S. Ghosh, Gary F. Musso |
Covalent attachment of oligonucleotides to solid supports. |
Nucleic Acids Res. |
1987 |
DBLP DOI BibTeX RDF |
|
25 | Andrzej K. Konopka, G. W. Smythers |
DISTAN--a program which detects significant distances between short oligonucleotides. |
Comput. Appl. Biosci. |
1987 |
DBLP DOI BibTeX RDF |
|
25 | Ronald Frank, Wiebke Heikens, Gudrun Heisterberg-Moutsis, Helmut Blöcker |
A new general approach for the simultaneous chemical synthesis of large numbers of oligonucleotides: segmental solid supports. |
Nucleic Acids Res. |
1983 |
DBLP DOI BibTeX RDF |
|
25 | V. L. Drutsa, V. F. Zarytova, D. G. Knorre, A. V. Lebedev, N. I. Sokolova, Z. A. Shabarova |
Investigation of activation of phosphate groups in mono- and oligonucleotides with mesitoyl chloride. |
Nucleic Acids Res. |
1978 |
DBLP DOI BibTeX RDF |
|
25 | Amy K. Falvey, Gary B. Weiss, Leslie J. Krueger, Judith A. Kantor, W. French Anderson |
Transcription of single base oligonucleotides by ribonucleic acid- directed deoxyribonucleic acid polymerase. |
Nucleic Acids Res. |
1976 |
DBLP DOI BibTeX RDF |
|
17 | M. Leigh Fanning, Joanne Macdonald, Darko Stefanovic |
Advancing the Deoxyribozyme-Based Logic Gate Design Process. |
DNA |
2009 |
DBLP DOI BibTeX RDF |
|
17 | Lenwood S. Heath, Amrita Pati |
Genomic Signatures in De Bruijn Chains. |
WABI |
2007 |
DBLP DOI BibTeX RDF |
|
17 | Ann-Ping Tsou, Yi-Ming Sun, Chia-Lin Liu, Hsien-Da Huang, Jorng-Tzong Horng, Meng-Feng Tsai, Baw-Jhiune Liu |
Biological Data Warehousing System for Identifying Transcriptional Regulatory Sites From Gene Expressions of Microarray Data. |
IEEE Trans. Inf. Technol. Biomed. |
2006 |
DBLP DOI BibTeX RDF |
|
17 | Ulrich Bockelmann |
Detecting DNA by field effect transistor arrays. |
VLSI-SoC |
2006 |
DBLP DOI BibTeX RDF |
|
17 | Kiranchand V. Bobba, Andrew Neel, Vinhthuy T. Phan, Max H. Garzon |
"Reasoning" and "Talking" DNA: Can DNA Understand English? |
DNA |
2006 |
DBLP DOI BibTeX RDF |
Semantic analysis and information retrieval, DNA chips and microarrays, sensitivy analysis, data classification and discrimination, question answering |
17 | Max H. Garzon, Vinhthuy T. Phan, Sujoy Roy, Andrew Neel |
In Search of Optimal Codes for DNA Computing. |
DNA |
2006 |
DBLP DOI BibTeX RDF |
Word design, encoding data on DNA, fault-tolerant DNA computing, maximal code sets, complex DNA self-assembly, shuffle codes, Gibbs energy |
17 | Zuwairie Ibrahim, Yusei Tsuboi, Osamu Ono, Marzuki Khalid |
Hybrid Concentration-Controlled Direct-Proportional Length-Based DNA Computing for Numerical Optimization of the Shortest Path Problem. |
BioADIT |
2006 |
DBLP DOI BibTeX RDF |
|
17 | Doron Lipson, Yonatan Aumann, Amir Ben-Dor, Nathan Linial, Zohar Yakhini |
Efficient Calculation of Interval Scores for DNA Copy Number Data Analysis. |
RECOMB |
2005 |
DBLP DOI BibTeX RDF |
|
17 | Max H. Garzon, Vinhthuy T. Phan, Kiran C. Bobba, Raghuver Kontham |
Sensitivity and Capacity of Microarray Encodings. |
DNA |
2005 |
DBLP DOI BibTeX RDF |
h-distance, DNA chips, genomic analysis, classification and discrimination, data mining, fault-tolerant computing, microarrays, Data representation, Gibbs energy |
17 | Keiichiro Takahashi, Satsuki Yaegashi, Hiroyuki Asanuma, Masami Hagiya |
Photo- and Thermoregulation of DNA Nanomachines. |
DNA |
2005 |
DBLP DOI BibTeX RDF |
|
17 | Shibin Qiu, Terran Lane |
String Kernels of Imperfect Matches for Off-target Detection in RNA Interference. |
International Conference on Computational Science (2) |
2005 |
DBLP DOI BibTeX RDF |
|
17 | Zhijin Wu, Rafael A. Irizarry |
Stochastic models inspired by hybridization theory for short oligonucleotide arrays. |
RECOMB |
2004 |
DBLP DOI BibTeX RDF |
affymetrix probe-level data, background adjustment, stochastic models, microarrays, physical models |
17 | WeiPing Chen, Dongying Wu, Wei Zha, Paul Russell |
Identification of Highly Significant Sequence Patterns in siRNAs for the Optimal Design of siRNA. |
CBMS |
2004 |
DBLP DOI BibTeX RDF |
|
17 | Vinhthuy T. Phan, Max H. Garzon |
The Capacity of DNA for Information Encoding. |
DNA |
2004 |
DBLP DOI BibTeX RDF |
Information storage capacity of DNA, h-distance, codeword design, shuffle codes, abiotic data on DNA chips, Gibbs energy |
17 | Hsiao Ping Lee, Tzu Fang Sheu, Yin-Te Tsai, Ching Hua Shih, Chuan Yi Tang |
A Efficient Algorithm for Unique Signature Discovery on Whole-Genome EST Databases. |
CSB |
2004 |
DBLP DOI BibTeX RDF |
|
17 | Tadanori Mayumi |
From the Pharmacokinetics to the Intracellular Dynamic Phase - Direct Introduction of Nanoparticles into Cytoplasm of Living Cells. |
ICMENS |
2004 |
DBLP DOI BibTeX RDF |
|
17 | Stanislav Angelov, Boulos Harb, Sampath Kannan, Sanjeev Khanna, Junhyong Kim, Li-San Wang |
Genome Identification and Classification by Short Oligo Arrays. |
WABI |
2004 |
DBLP DOI BibTeX RDF |
|
17 | Maryam S. Nuser, Russell J. Deaton |
Simulations of DNA Computing with In Vitro Selection. |
Genet. Program. Evolvable Mach. |
2003 |
DBLP DOI BibTeX RDF |
DNA word design, in vitro selection, simulation, DNA computing |