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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 9 occurrences of 9 keywords
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Results
Found 43 publication records. Showing 43 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
121 | Dongsheng Che, Guojun Li, Shane T. Jensen, Jun S. Liu, Ying Xu 0001 |
PFP: A Computational Framework for Phylogenetic Footprinting in Prokaryotic Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings, pp. 110-121, 2008, Springer, 978-3-540-79449-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
101 | Shuqin Wang, Yan Wang 0028, Wei Du 0002, Fangxun Sun, Xiumei Wang, Yanchun Liang 0001, Chunguang Zhou |
A Multi-gene-Feature-Based Genetic Algorithm for Prediction of Operon. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICANNGA (1) ![In: Adaptive and Natural Computing Algorithms, 8th International Conference, ICANNGA 2007, Warsaw, Poland, April 11-14, 2007, Proceedings, Part I, pp. 296-305, 2007, Springer, 978-3-540-71589-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
81 | PhuongAn Dam, Victor Olman, Ying Xu 0001 |
Improving Operon Prediction in E. coli. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 69-70, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
59 | Shujiro Okuda, Toshiaki Katayama, Shuichi Kawashima, Susumu Goto, Minoru Kanehisa |
ODB: a database of operons accumulating known operons across multiple genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 34(Database-Issue), pp. 358-362, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
56 | Arvind K. Bansal, Christopher Woolverton |
Applying Automatically Derived Gene-Groups to Automatically Predict and Refine Metabolic Pathways. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Knowl. Data Eng. ![In: IEEE Trans. Knowl. Data Eng. 15(4), pp. 883-894, 2003. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
enzymes, gene-groups, microbes, operons, orthologs, pathogenicity, Automation, homologs, drug-discovery, pathway, metabolic pathway, bacteria |
40 | Matheus B. S. Barros, Simone L. Martins, Alexandre Plastino 0001 |
Operon Prediction in Bacterial Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology, Third Brazilian Symposium on Bioinformatics, BSB 2008, Santo André, Brazil, August 28-30, 2008. Proceedings, pp. 13-22, 2008, Springer, 978-3-540-85556-9. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
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40 | Wei Du 0002, Yan Wang 0028, Shuqin Wang, Xiumei Wang, Fangxun Sun, Chen Zhang, Chunguang Zhou, Chengquan Hu, Yanchun Liang 0001 |
Operon Prediction Using Neural Network Based on Multiple Information of Log-Likelihoods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISNN (1) ![In: Advances in Neural Networks - ISNN 2007, 4th International Symposium on Neural Networks, ISNN 2007, Nanjing, China, June 3-7, 2007, Proceedings, Part I, pp. 652-657, 2007, Springer, 978-3-540-72382-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
40 | Natalia Khuri, Nikhila S. Rao |
Operon Prediction in Cyanobacteria using Comparative Genomics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 23-24, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
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40 | Hongwei Wu, Fenglou Mao, Victor Olman, Ying Xu 0001 |
Accurate Prediction of Orthologous Gene Groups in Microbes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005, pp. 73-79, 2005, IEEE Computer Society, 0-7695-2344-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
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40 | Fenglou Mao, Zhengchang Su, Victor Olman, David Chuang, Ying Xu 0001 |
Pathway Mapping with Operon Information: An Integer-Programming Method. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 642-643, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
40 | Takashi Gojobori, T. Daniel Andrews, Takeshi Itoh |
Evolutionary features of genomes as disclosed by comparative analysis of complete genome sequences (abstract only). ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, RECOMB 2000, Tokyo, Japan, April 8-11, 2000, pp. 137, 2000, ACM, 1-58113-186-0. The full citation details ...](Pics/full.jpeg) |
2000 |
DBLP DOI BibTeX RDF |
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29 | Bowen Yang, Minal Khatri, Jinfang Zheng, Jitender S. Deogun, Yanbin Yin |
Genome mining for anti-CRISPR operons using machine learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(5), May 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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29 | Ahmad Al-Omari, James Griffith, Ashley Scruse, Robert W. Robinson, Heinz-Bernd Schüttler, Jonathan P. Arnold |
Ensemble Methods for Identifying RNA Operons and Regulons in the Clock Network of Neurospora Crassa. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Access ![In: IEEE Access 10, pp. 32510-32524, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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29 | Marius A. Wenzel, Berndt Müller, Jonathan Pettitt |
SLIDR and SLOPPR: flexible identification of spliced leader trans-splicing and prediction of eukaryotic operons from RNA-Seq data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 22(1), pp. 140, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
29 | Le Huang, Bowen Yang, Haidong Yi, Amina Asif, Jiawei Wang 0002, Trevor Lithgow, Han Zhang 0017, Fayyaz ul Amir Afsar Minhas, Yanbin Yin |
AcrDB: a database of anti-CRISPR operons in prokaryotes and viruses. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 49(Database-Issue), pp. D622-D629, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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29 | Haidong Yi, Le Huang, Bowen Yang, Javi Gomez, Han Zhang 0017, Yanbin Yin |
AcrFinder: genome mining anti-CRISPR operons in prokaryotes and their viruses. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 48(Webserver-Issue), pp. W358-W365, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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29 | Cedoljub Bundalovic-Torma, Gregory B. Whitfield, Lindsey S. Marmont, P. Lynne Howell, John Parkinson |
A systematic pipeline for classifying bacterial operons reveals the evolutionary landscape of biofilm machineries. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 16(4), 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
29 | Huy N. Nguyen, Ashish Jain, Oliver Eulenstein, Iddo Friedberg |
Tracing the ancestry of operons in bacteria. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 35(17), pp. 2998-3004, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
29 | Xizeng Mao, Qin Ma 0003, Bingqiang Liu, Xin Chen, Hanyuan Zhang, Ying Xu 0001 |
Revisiting operons: an analysis of the landscape of transcriptional units in E. coli. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 16, pp. 356:1-356:9, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
29 | Xizeng Mao, Qin Ma 0003, Chuan Zhou 0009, Xin Chen, Hanyuan Zhang, Jincai Yang, Fenglou Mao, Wei Lai, Ying Xu 0001 |
DOOR 2.0: presenting operons and their functions through dynamic and integrated views. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 42(Database-Issue), pp. 654-659, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
29 | Li-Yeh Chuang, Jui-Hung Tsai, Cheng-Hong Yang 0001 |
PPO: Predictor for Prokaryotic Operons. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 26(24), pp. 3127-3128, 2010. The full citation details ...](Pics/full.jpeg) |
2010 |
DBLP DOI BibTeX RDF |
|
29 | Fenglou Mao, PhuongAn Dam, Jacky Chou, Victor Olman, Ying Xu 0001 |
DOOR: a database for prokaryotic operons. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 37(Database-Issue), pp. 459-463, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
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29 | Mihaela Pertea, Kunmi Ayanbule, Megan Smedinghoff, Steven L. Salzberg |
OperonDB: a comprehensive database of predicted operons in microbial genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 37(Database-Issue), pp. 479-482, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
29 | Ilya Plyusnin, Liisa Holm, Matti Kankainen |
LOCP - locating pilus operons in Gram-positive bacteria. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 25(9), pp. 1187-1188, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
29 | Morgan N. Price, Adam P. Arkin, Eric J. Alm |
OpWise: Operons aid the identification of differentially expressed genes in bacterial microarray experiments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 7, pp. 19, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
29 | Sarita Ranjan, Ranjit Kumar Gundu, Akash Ranjan |
MycoperonDB: a database of computationally identified operons and transcriptional units in Mycobacteria. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 7(S-5), 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
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29 | Sailu Yellaboina, Jayashree Seshadri, M. Senthil Kumar, Akash Ranjan |
PredictRegulon: a web server for the prediction of the regulatory protein binding sites and operons in prokaryote genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 32(Web-Server-Issue), pp. 318-320, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
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29 | Anne-Sophie Carpentier, Alessandra Riva, Pierre Tisseur, Gilles Didier, Alain Hénaut |
The operons, a criterion to compare the reliability of transcriptome analysis tools: ICA is more reliable than ANOVA, PLS and PCA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 28(1), pp. 3-10, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
29 | Yuhong Wang, John P. Rose, Bi-Cheng Wang, Dawei Lin |
Reconstruction of Ancient Operons From Complete Microbial Genome Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 2nd IEEE Computer Society Bioinformatics Conference, CSB 2003, Stanford, CA, USA, August 11-14, 2003, pp. 486-487, 2003, IEEE Computer Society, 0-7695-2000-6. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
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29 | Carlos Azevedo, Alexandre Plastino 0001, Ana Tereza Ribeiro de Vasconcelos |
Procsimo: uma Ferramenta de Procura de Similaridade entre Operons. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WOB ![In: II Brazilian Workshop on Bioinformatics, December 3-5, 2003, Macaé, RJ, Brazil, pp. 117-120, 2003. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP BibTeX RDF |
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29 | Brian Tjaden, David R. Haynor, Sergey Stolyar, Carsten Rosenow, Eugene Kolker |
Identifying operons and untranslated regions of transcripts using Escherichia coli RNA expression analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISMB ![In: Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, August 3-7, 2002, Edmonton, Alberta, Canada, pp. 337-344, 2002. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP BibTeX RDF |
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29 | Gabriel Moreno-Hagelsieb, Julio Collado-Vides |
A powerful non-homology method for the prediction of operons in prokaryotes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISMB ![In: Proceedings of the Tenth International Conference on Intelligent Systems for Molecular Biology, August 3-7, 2002, Edmonton, Alberta, Canada, pp. 329-336, 2002. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP BibTeX RDF |
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29 | Günter Theißen, Jürgen Eberle, Martin Zacharias, Luise Tobias, Rolf Wagner |
The tL structure within the leader region of Escherichia coli ribosomal RNA operons has post-transcriptional functions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 18(13), pp. 3893-3901, 1990. The full citation details ...](Pics/full.jpeg) |
1990 |
DBLP DOI BibTeX RDF |
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29 | R. Gafny, H. C. Hyman, S. Razin, G. Glaser |
Promoters of Mycoplasma capricolum ribosomal RNA operons: identical activities but different regulation in homologous and heterologous cells. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 16(1), pp. 61-76, 1988. The full citation details ...](Pics/full.jpeg) |
1988 |
DBLP DOI BibTeX RDF |
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29 | Steven R. Rodermel, P. Orlin, L. Bogorad |
The transcription termination region between two convergently- transcribed photoregulated operons in the maize plastid chromosome contains rps14, trnR (UCU) and a putative trnfM pseudogene. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 15(13), pp. 5493, 1987. The full citation details ...](Pics/full.jpeg) |
1987 |
DBLP DOI BibTeX RDF |
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20 | Kazuhiro Ohkura, Toshiyuki Yasuda, Yuichi Kawamatsu, Yoshiyuki Matsumura, Kanji Ueda |
MBEANN: Mutation-Based Evolving Artificial Neural Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ECAL ![In: Advances in Artificial Life, 9th European Conference, ECAL 2007, Lisbon, Portugal, September 10-14, 2007, Proceedings, pp. 936-945, 2007, Springer, 978-3-540-74912-7. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
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20 | Jizhen Zhao, Dongsheng Che, Liming Cai |
Comparative Pathway Prediction Via Unified Graph Modeling of Genomic Structure Information. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings, pp. 627-637, 2007, Springer, 978-3-540-72030-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Pathway prediction, protein-DNA interaction, operon, independent set, clique, tree decomposition |
20 | Juan Carlos Fernandez, Edgar E. Vallejo, Enrique Morett |
Fuzzy C-means for inferring functional coupling of proteins from their phylogenetic profiles. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBCB ![In: Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2006, Renaissance Hotel Downtown, Toronto, Ontario, Canada, September 28-29, 2006, pp. 1-8, 2006, IEEE, 1-4244-0623-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
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20 | Xiu-Feng Wan, Dong Xu |
Intrinsic Terminator Prediction and Its Application in Synechococcus sp. WH8102. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Sci. Technol. ![In: J. Comput. Sci. Technol. 20(4), pp. 465-482, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
rho-independent terminator, RNA local secondary structure, Synechococcus, Rnall, intrinsic terminator, transcription termination |
20 | Sun Kim, Jeong-Hyeon Choi, Jiong Yang |
Gene Teams with Relaxed Proximity Constraint. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005, pp. 44-55, 2005, IEEE Computer Society, 0-7695-2344-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
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20 | Victor Olman, Hanchuan Peng, Zhengchang Su, Ying Xu 0001 |
Mapping of Microbial Pathways through Constrained Mapping of Orthologous Genes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 363-370, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
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20 | Shoko Miyake, Yukako Tohsato, Yoichi Takenaka, Hideo Matsuda |
Clustering Method for Comparative Analysis between Genomes and Pathways. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DASFAA ![In: Eighth International Conference on Database Systems for Advanced Applications (DASFAA '03), March 26-28, 2003, Kyoto, Japan, pp. 327-334, 2003, IEEE Computer Society, 0-7695-1895-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
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20 | Arvind K. Bansal, Peer Bork |
Applying Logic Programming to Derive Novel Functional Information of Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PADL ![In: Practical Aspects of Declarative Languages, First International Workshop, PADL '99, San Antonio, Texas, USA, January 18-19, 1999, Proceedings, pp. 275-289, 1999, Springer, 3-540-65527-1. The full citation details ...](Pics/full.jpeg) |
1999 |
DBLP DOI BibTeX RDF |
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