Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
122 | Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente |
Metrics for Phylogenetic Networks II: Nodal and Triplets Metrics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(3), pp. 454-469, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
tree-child phylogenetic network, time consistency, partition distance, nodal distance, triplets distance, Phylogenetic network, temporal representation |
98 | Dan Gusfield, Satish Eddhu, Charles H. Langley |
Efficient Reconstruction of Phylogenetic Networks with Constrained Recombination. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 2nd IEEE Computer Society Bioinformatics Conference, CSB 2003, Stanford, CA, USA, August 11-14, 2003, pp. 363-374, 2003, IEEE Computer Society, 0-7695-2000-6. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
88 | Jesper Jansson 0001, Wing-Kin Sung |
The Maximum Agreement of Two Nested Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISAAC ![In: Algorithms and Computation, 15th International Symposium, ISAAC 2004, Hong Kong, China, December 20-22, 2004, Proceedings, pp. 581-593, 2004, Springer, 3-540-24131-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
84 | Tingting Zhou, Keith C. C. Chan, Yi Pan 0001, Zhenghua Wang |
An Approach for Determining Evolutionary Distance in Network-Based Phylogenetic Analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings, pp. 38-49, 2008, Springer, 978-3-540-79449-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
network-based phylogenetic analysis, metabolic network comparison, evolutionary distance, Jaccard distance, phylogenetic conservation, topological importance |
84 | Fengrong Ren, Hiroshi Tanaka, Noria Fukuda, Takashi Gojobori |
Molecular evolutionary phylogenetic trees based on minimum description length principle. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 165-173, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
molecular evolutionary phylogenetic trees, minimum complexity phylogenetic tree, branch lengths, logarithmic likelihood, mitochondrial DNA sequences, complexity, trees (mathematics), inference mechanisms, DNA, genetics, biology computing, inductive inference, minimum description length principle, tree topology |
69 | Nikolaos Alachiotis 0001, Euripides Sotiriades, Apostolos Dollas, Alexandros Stamatakis |
Exploring FPGAs for accelerating the phylogenetic likelihood function. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS ![In: 23rd IEEE International Symposium on Parallel and Distributed Processing, IPDPS 2009, Rome, Italy, May 23-29, 2009, pp. 1-8, 2009, IEEE. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
69 | Xizhou Feng, Kirk W. Cameron, Duncan A. Buell |
Biology - PBPI: a high performance implementation of Bayesian phylogenetic inference. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SC ![In: Proceedings of the ACM/IEEE SC2006 Conference on High Performance Networking and Computing, November 11-17, 2006, Tampa, FL, USA, pp. 75, 2006, ACM Press, 0-7695-2700-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
69 | Bernard M. E. Moret, Luay Nakhleh, Tandy J. Warnow, C. Randal Linder, Anna Tholse, Anneke Padolina, Jerry Sun 0001, Ruth E. Timme |
Phylogenetic Networks: Modeling, Reconstructibility, and Accuracy. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 1(1), pp. 13-23, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
67 | Daniel H. Huson |
Drawing Rooted Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(1), pp. 103-109, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
rooted phylogenetic networks, graph drawing |
67 | Nguyen Bao Nguyen, C. Thach Nguyen, Wing-Kin Sung |
Fast algorithms for computing the tripartition-based distance between phylogenetic networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comb. Optim. ![In: J. Comb. Optim. 13(3), pp. 223-242, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Tripartition-based distance, Algorithm, Phylogenetic network |
67 | Leon Poladian |
A GA for maximum likelihood phylogenetic inference using neighbour-joining as a genotype to phenotype mapping. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Genetic and Evolutionary Computation Conference, GECCO 2005, Proceedings, Washington DC, USA, June 25-29, 2005, pp. 415-422, 2005, ACM, 1-59593-010-8. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
genotype to phenotype mapping, neighbour joining, genetic algorithms, maximum likelihood, phylogenetic inference |
67 | Luay Nakhleh, Guohua Jin, Fengmei Zhao, John M. Mellor-Crummey |
Reconstructing Phylogenetic Networks Using Maximum Parsimony. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005, pp. 93-102, 2005, IEEE Computer Society, 0-7695-2344-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
phylogenetic networks, maximum parsimony, horizontal gene transfer |
67 | John Bluis, Dong-Guk Shin |
Nodal Distance Algorithm: Calculating a Phylogenetic Tree Comparison Metri. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 3rd IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2003), 10-12 March 2003, Bethesda, MD, USA, pp. 87-94, 2003, IEEE Computer Society, 0-7695-1907-5. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
algorithm, phylogenetic tree, tree comparison |
67 | Jijun Tang, Bernard M. E. Moret |
Phylogenetic Reconstruction from Gene-Rearrangement Data with Unequal Gene Content. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WADS ![In: Algorithms and Data Structures, 8th International Workshop, WADS 2003, Ottawa, Ontario, Canada, July 30 - August 1, 2003, Proceedings, pp. 37-46, 2003, Springer, 3-540-40545-3. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
gene-order data, whole-genome data, Hannenhalli-Pevzner theory, inversion distance, reversal distance, experimental assessment, lower bounds, Computational biology, edit distance, gene duplications, phylogenetic reconstruction, signed permutations |
64 | Kun-Ming Yu, Jiayi Zhou, Chun-Yuan Lin, Chuan Yi Tang |
An Efficient Parallel Algorithm for Ultrametric Tree Construction Based on 3PR. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISPA Workshops ![In: Frontiers of High Performance Computing and Networking - ISPA 2006 Workshops, ISPA 2006 International Workshops, FHPCN, XHPC, S-GRACE, GridGIS, HPC-GTP, PDCE, ParDMCom, WOMP, ISDF, and UPWN, Sorrento, Italy, December 4-7, 2006, Proceedings, pp. 215-220, 2006, Springer, 3-540-49860-5. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
minimum ultrametric tree, parallel branch-and-bound algorithm, 3-point relationship, 4-point relationship, phylogenetic tree |
60 | Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente |
Metrics for Phylogenetic Networks I: Generalizations of the Robinson-Foulds Metric. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(1), pp. 46-61, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Trees, Graph algorithms, Biology and genetics |
60 | John Hawkins, Timothy L. Bailey |
The Statistical Power of Phylogenetic Motif Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 12th Annual International Conference, RECOMB 2008, Singapore, March 30 - April 2, 2008. Proceedings, pp. 112-126, 2008, Springer, 978-3-540-78838-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
60 | Thomas M. Keane, Andrew J. Page, Thomas J. Naughton, Simon A. A. Travers, James O. McInerney |
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithmica ![In: Algorithmica 45(3), pp. 285-300, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
60 | Daniel Barker, Mark Pagel |
Predicting functional gene-links from phylogenetic-statistical analyses of whole genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 51-52, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
60 | Nicholas D. Pattengale, Bernard M. E. Moret |
Phylogenetic Postprocessing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 57-58, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
60 | Zhi-Zhong Chen, Tatsuie Tsukiji |
Computing Bounded-Degree Phylogenetic Roots of Disconnected Graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WG ![In: Graph-Theoretic Concepts in Computer Science, 30th International Workshop,WG 2004, Bad Honnef, Germany, June 21-23, 2004, Revised Papers, pp. 308-319, 2004, Springer, 3-540-24132-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
60 | Patricia Buendia, Giri Narasimhan |
MinPD: Distance-Based Phylogenetic Analysis and Recombination Detection of Serially-Sampled HIV Quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 110-119, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
60 | Luay Nakhleh, Daniel P. Miranker, François Barbançon, William H. Piel, Michael J. Donoghue |
Requirements of Phylogenetic Databases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 3rd IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2003), 10-12 March 2003, Bethesda, MD, USA, pp. 141-148, 2003, IEEE Computer Society, 0-7695-1907-5. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
60 | Zhi-Zhong Chen, Tao Jiang 0001, Guo-Hui Lin |
Computing Phylogenetic Roots with Bounded Degrees and Errors. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WADS ![In: Algorithms and Data Structures, 7th International Workshop, WADS 2001, Providence, RI, USA, August 8-10, 2001, Proceedings, pp. 377-388, 2001, Springer, 3-540-42423-7. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
58 | Guohua Jin, Luay Nakhleh, Sagi Snir, Tamir Tuller |
Parsimony Score of Phylogenetic Networks: Hardness Results and a Linear-Time Heuristic. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(3), pp. 495-505, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
hardness and approximation, phylogenetic networks, Maximum parsimony, horizontal gene transfer |
58 | Sergey Bereg, Yuanyi Zhang |
Phylogenetic Networks Based on the Molecular Clock Hypothesis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(4), pp. 661-667, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
molecular clock hypothesis, least-squares fit, Phylogenetic Networks |
58 | Michael Ott 0001, Jaroslaw Zola, Alexandros Stamatakis, Srinivas Aluru |
Large-scale maximum likelihood-based phylogenetic analysis on the IBM BlueGene/L. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SC ![In: Proceedings of the ACM/IEEE Conference on High Performance Networking and Computing, SC 2007, November 10-16, 2007, Reno, Nevada, USA, pp. 4, 2007, ACM Press, 978-1-59593-764-3. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
IBM BlueGene/L, RAxML, maximum likelihood, phylogenetic inference |
58 | Leon Poladian, Lars S. Jermiin |
Multi-objective evolutionary algorithms and phylogenetic inference with multiple data sets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Soft Comput. ![In: Soft Comput. 10(4), pp. 359-368, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
Evolutionary algorithms, Phylogenetic inference, Multiobjective optimisation |
58 | Guillaume Blin, Cédric Chauve, Guillaume Fertin |
Genes Order and Phylogenetic Reconstruction: Application to gamma-Proteobacteria. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comparative Genomics ![In: Comparative Genomics, RECOMB 2005 International Workshop, RCG 2005, Dublin, Ireland, September 18-20, 2005, Proceedings, pp. 11-20, 2005, Springer, 3-540-28932-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
conserved intervals, ?-Proteobacteria, gene families, breakpoints, common intervals, Phylogenetic reconstruction |
50 | Frederick A. Matsen IV |
Fourier Transform Inequalities for Phylogenetic Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(1), pp. 89-95, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Impact of VLSI on system design, Backup/recovery |
50 | Philippe Gambette, Vincent Berry, Christophe Paul |
The Structure of Level-k Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CPM ![In: Combinatorial Pattern Matching, 20th Annual Symposium, CPM 2009, Lille, France, June 22-24, 2009, Proceedings, pp. 289-300, 2009, Springer, 978-3-642-02440-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
50 | Sen Zhang, Jason Tsong-Li Wang |
Discovering Frequent Agreement Subtrees from Phylogenetic Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Knowl. Data Eng. ![In: IEEE Trans. Knowl. Data Eng. 20(1), pp. 68-82, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Data mining, Bioinformatics (genome or protein) databases |
50 | Guilherme Palermo Coelho, Ana Estela Antunes da Silva, Fernando J. Von Zuben |
Evolving Phylogenetic Trees: A Multiobjective Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology, Second Brazilian Symposium on Bioinformatics, BSB 2007, Angra dos Reis, Brazil, August 29-31, 2007, Proceedings, pp. 113-125, 2007, Springer, 978-3-540-73730-8. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
50 | Warren A. Hunt Jr., Serita M. Nelesen |
Phylogenetic trees in ACL2. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACL2 ![In: Proceedings of the Sixth International Workshop on the ACL2 Theorem Prover and its Applications, ACL2 2006, Seattle, Washington, USA, August 15-16, 2006, pp. 99-102, 2006, ACM, 0-9788493-0-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
ACL2, phylogenetics |
50 | Roger A. Craig, Li Liao |
Protein classification using transductive learning on phylogenetic profiles. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2006 ACM Symposium on Applied Computing (SAC), Dijon, France, April 23-27, 2006, pp. 161-166, 2006, ACM, 1-59593-108-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
50 | Nguyen Bao Nguyen, C. Thach Nguyen, Wing-Kin Sung |
Fast Algorithms for Computing the Tripartition-Based Distance Between Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISAAC ![In: Algorithms and Computation, 16th International Symposium, ISAAC 2005, Sanya, Hainan, China, December 19-21, 2005, Proceedings, pp. 402-411, 2005, Springer, 3-540-30935-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
50 | Sergey Bereg, Yuanyi Zhang |
Phylogenetic Networks Based on the Molecular Clock Hypothesis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 19-21 October 2005, Minneapolis, MN, USA, pp. 320-323, 2005, IEEE Computer Society, 0-7695-2476-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
50 | Osamu Maruyama, Akiko Matsuda, Satoru Kuhara |
Reconstructing Phylogenetic Trees of Prokaryote Genomes by Randomly Sampling Oligopeptides. ![Search on Bibsonomy](Pics/bibsonomy.png) |
International Conference on Computational Science (2) ![In: Computational Science - ICCS 2005, 5th International Conference, Atlanta, GA, USA, May 22-25, 2005, Proceedings, Part II, pp. 911-918, 2005, Springer, 3-540-26043-9. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
50 | Gabriel Valiente |
A Fast Algorithmic Technique for Comparing Large Phylogenetic Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SPIRE ![In: String Processing and Information Retrieval, 12th International Conference, SPIRE 2005, Buenos Aires, Argentina, November 2-4, 2005, Proceedings, pp. 370-375, 2005, Springer, 3-540-29740-5. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
50 | Yaw-Ling Lin, Tsan-sheng Hsu |
Efficient Algorithms for Descendent Subtrees Comparison of Phylogenetic Trees with Applications to Co-evolutionary Classifications in Bacterial Genome. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISAAC ![In: Algorithms and Computation, 14th International Symposium, ISAAC 2003, Kyoto, Japan, December 15-17, 2003, Proceedings, pp. 339-351, 2003, Springer, 3-540-20695-7. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
50 | Adam C. Siepel, David Haussler |
Combining phylogenetic and hidden Markov models in biosequence analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sventh Annual International Conference on Computational Biology, RECOMB 2003, Berlin, Germany, April 10-13, 2003, pp. 277-286, 2003, ACM, 1-58113-635-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
context-sensitive substitution, maximum likelihood |
50 | Mathieu Blanchette, Samson Kwong, Martin Tompa |
An Empirical Comparison of Tools for Phylogenetic Footprinting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 3rd IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2003), 10-12 March 2003, Bethesda, MD, USA, pp. 69-78, 2003, IEEE Computer Society, 0-7695-1907-5. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
50 | Frédéric Guinand, Gilles Parmentier, Denis Trystram |
Construction of Phylogenetic Trees on Parallel Clusters. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PPAM ![In: Parallel Processing and Applied Mathematics, 4th International Conference, PPAM 2001 Naleczow, Poland, September 9-12, 2001, Revised Papers, pp. 218-227, 2001, Springer, 3-540-43792-4. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
48 | Magnus Bordewich, Olivier Gascuel, Katharina T. Huber, Vincent Moulton |
Consistency of Topological Moves Based on the Balanced Minimum Evolution Principle of Phylogenetic Inference. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(1), pp. 110-117, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
subtree prune and regraft (SPR), BSPR algorithm, Nearest Neighbor Interchange (NNI), BNNI algorithm, balanced minimum evolution principle (BME), tree-length, quartet-distance, Robinson Foulds distance, safety radius, topological move, consistency, phylogenetic tree |
48 | Iyad A. Kanj, Luay Nakhleh, Ge Xia |
The Compatibility of Binary Characters on Phylogenetic Networks: Complexity and Parameterized Algorithms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithmica ![In: Algorithmica 51(2), pp. 99-128, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Parameterized algorithms and complexity, Linguistics, Phylogenetic networks |
48 | Zhi-Zhong Chen |
Approximation Algorithms for Bounded Degree Phylogenetic Roots. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithmica ![In: Algorithmica 51(1), pp. 1-23, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Phylogenetic roots, Approximation algorithms, Randomized algorithms, Graph algorithms, Computational biology, Phylogenies |
48 | Bin Ma 0002, Lei Xin, Kaizhong Zhang |
A new quartet approach for reconstructing phylogenetic trees: quartet joining method. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comb. Optim. ![In: J. Comb. Optim. 16(3), pp. 293-306, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Quartet based method, Phylogenetic reconstruction, Neighbor joining |
48 | Tingting Zhou, Keith C. C. Chan, Zhenghua Wang |
TopEVM: Using Co-occurrence and Topology Patterns of Enzymes in Metabolic Networks to Construct Phylogenetic Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PRIB ![In: Pattern Recognition in Bioinformatics, Third IAPR International Conference, PRIB 2008, Melbourne, Australia, October 15-17, 2008. Proceedings, pp. 225-236, 2008, Springer, 978-3-540-88434-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
TopEVM, co-occurrence pattern, topology pattern, degree centrality, evolutionary distance, document clustering, metabolic network, phylogenetic analysis |
48 | Xiuwei Zhang, Maryam Zaheri, Bernard M. E. Moret |
Using Phylogenetic Relationships to Improve the Inference of Transcriptional Regulatory Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMEI (1) ![In: Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, BMEI 2008, May 28-30, 2008, Sanya, Hainan, China - Volume 1, pp. 186-193, 2008, IEEE Computer Society, 978-0-7695-3118-2. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
phylogenetic relationships, maximum likelihood, dynamic Bayesian networks, regulatory networks |
48 | Zhihua Du, Zhen Ji |
A New Algorithm for Reconstruction of Phylogenetic Tree. ![Search on Bibsonomy](Pics/bibsonomy.png) |
AIRS ![In: Information Retrieval Technology, 4th Asia Infomation Retrieval Symposium, AIRS 2008, Harbin, China, January 15-18, 2008, Revised Selected Papers, pp. 472-477, 2008, Springer, 978-3-540-68633-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
DCM, divide-and-conquer, Phylogenetic tree |
48 | Magnus Bordewich, Charles Semple |
Computing the Hybridization Number of Two Phylogenetic Trees Is Fixed-Parameter Tractable. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(3), pp. 458-466, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Rooted phylogenetic tree, reticulate evolution, agreement forest, subtree prune and regraft, hybridization network |
48 | Wan Nazmee Wan Zainon, Paul R. Calder |
Visualising phylogenetic trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
AUIC ![In: User Interfaces 2006, 7th Australasian User Interface Conference (AUIC 2006), Hobart, Tasmania, Australia, January 16-19 2005, pp. 145-152, 2006, Australian Computer Society, 1-920682-32-5. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP BibTeX RDF |
interactive visualisation, bioinformatics, phylogenetic trees |
48 | William S. Kennedy, Guohui Lin |
5-th Phylogenetic Root Construction for Strictly Chordal Graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISAAC ![In: Algorithms and Computation, 16th International Symposium, ISAAC 2005, Sanya, Hainan, China, December 19-21, 2005, Proceedings, pp. 738-747, 2005, Springer, 3-540-30935-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
phylogeny reconstruction, phylogenetic root, Steiner root, chordal, strictly chordal, Computational biology |
48 | Alexandros Stamatakis, Thomas Ludwig 0002, Harald Meier |
A fast program for maximum likelihood-based inference of large phylogenetic trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2004 ACM Symposium on Applied Computing (SAC), Nicosia, Cyprus, March 14-17, 2004, pp. 197-201, 2004, ACM, 1-58113-812-1. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
parallel & distributed computing, maximum likelihood, phylogenetic inference |
47 | Ling Qin, Jianli Luo, Zhimin Chen, Jing Guo, Ling Chen 0005, Yi Pan 0001 |
Phelogenetic Tree Construction using Self adaptive Ant Colony Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IMSCCS (1) ![In: Interdisciplinary and Multidisciplinary Research in Computer Science, IEEE CS Proceeding of the First International Multi-Symposium of Computer and Computational Sciences (IMSCCS|06), June 20-24, 2006, Zhejiang University, Hangzhou, China, Vol. 1, pp. 179-187, 2006, IEEE Computer Society, 0-7695-2581-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
45 | Nicholas D. Pattengale, Masoud Alipour, Olaf R. P. Bininda-Emonds, Bernard M. E. Moret, Alexandros Stamatakis |
How Many Bootstrap Replicates Are Necessary? ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 13th Annual International Conference, RECOMB 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings, pp. 184-200, 2009, Springer, 978-3-642-02007-0. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Support Value, Bootstopping, Bootstrap, Maximum Likelihood, Stopping Criterion, Phylogenetic Inference |
45 | Pingping Sun, Yanan Ma, Yazhuo Wei, Zhiqiang Ma 0003, Linying Lu, Ying Cui, Ping Huang |
Application of Improved K-mean Clustering in Predicting Protein-Protein Interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMEI (1) ![In: Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, BMEI 2008, May 28-30, 2008, Sanya, Hainan, China - Volume 1, pp. 83-86, 2008, IEEE Computer Society, 978-0-7695-3118-2. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
improved K-mean clustering, phylogenetic profile, protein-protein interactions |
45 | David Burstein, Igor Ulitsky, Tamir Tuller, Benny Chor |
Information Theoretic Approaches to Whole Genome Phylogenies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 9th Annual International Conference, RECOMB 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings, pp. 283-295, 2005, Springer, 3-540-25866-3. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Phylogenomics, whole genome and proteom phylogenetic, tree reconstruction, Kullback-Leibler relative entropy, divergence, distance matrix |
45 | Andreas W. M. Dress, Daniel H. Huson |
Constructing Splits Graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 1(3), pp. 109-115, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
splits graphs, graph drawing, Phylogenetic networks |
41 | Kenneth Sundberg, Mark J. Clement, Quinn Snell |
Visualizing Phylogenetic Treespace Using Cartographic Projections. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 9th International Workshop, WABI 2009, Philadelphia, PA, USA, September 12-13, 2009. Proceedings, pp. 321-332, 2009, Springer, 978-3-642-04240-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
41 | Andreas Spillner 0001, Binh T. Nguyen 0002, Vincent Moulton |
Computing Phylogenetic Diversity for Split Systems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 5(2), pp. 235-244, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Biology and genetics, Life and Medical Sciences |
41 | Leo van Iersel, Steven Kelk |
Constructing the Simplest Possible Phylogenetic Network from Triplets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISAAC ![In: Algorithms and Computation, 19th International Symposium, ISAAC 2008, Gold Coast, Australia, December 15-17, 2008. Proceedings, pp. 472-483, 2008, Springer, 978-3-540-92181-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
41 | Ilan Gronau, Shlomo Moran, Sagi Snir |
Fast and reliable reconstruction of phylogenetic trees with very short edges. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SODA ![In: Proceedings of the Nineteenth Annual ACM-SIAM Symposium on Discrete Algorithms, SODA 2008, San Francisco, California, USA, January 20-22, 2008, pp. 379-388, 2008, SIAM. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP BibTeX RDF |
|
41 | Zhanshan (Sam) Ma, Axel W. Krings |
Survival Analysis Modeling of Phylogenetic and Coalescent Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMEI (1) ![In: Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, BMEI 2008, May 28-30, 2008, Sanya, Hainan, China - Volume 1, pp. 178-185, 2008, IEEE Computer Society, 978-0-7695-3118-2. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
41 | Stefan Grünewald, Andreas Spillner 0001, Kristoffer Forslund, Vincent Moulton |
Constructing Phylogenetic Supernetworks from Quartets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 8th International Workshop, WABI 2008, Karlsruhe, Germany, September 15-19, 2008. Proceedings, pp. 284-295, 2008, Springer, 978-3-540-87360-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
41 | Feng Yue, Meng Zhang 0006, Jijun Tang |
A Heuristic for Phylogenetic Reconstruction Using Transposition. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, USA, pp. 802-808, 2007, IEEE Computer Society, 978-1-4244-1509-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
41 | Julia Chifman, Sonja Petrovic |
Toric Ideals of Phylogenetic Invariants for the General Group-Based Model on Claw Trees K 1, n . ![Search on Bibsonomy](Pics/bibsonomy.png) |
AB ![In: Algebraic Biology, Second International Conference, AB 2007, Castle of Hagenberg, Austria, July 2-4, 2007, Proceedings, pp. 307-321, 2007, Springer, 978-3-540-73432-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
41 | Monther Tarawneh, Bing Bing Zhou, Penghao Wang, Albert Y. Zomaya |
Investigation of Relationships among Excavate Taxa Using a New Quartet-Based Phylogenetic Analysis Method. ![Search on Bibsonomy](Pics/bibsonomy.png) |
AINA Workshops (1) ![In: 21st International Conference on Advanced Information Networking and Applications (AINA 2007), Workshops Proceedings, Volume 1, May 21-23, 2007, Niagara Falls, Canada, pp. 662-667, 2007, IEEE Computer Society. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
41 | Juan Diego Trujillo, Carlos Cotta |
An Evolutionary Approach to the Inference of Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PPSN ![In: Parallel Problem Solving from Nature - PPSN IX, 9th International Conference, Reykjavik, Iceland, September 9-13, 2006, Procedings, pp. 332-341, 2006, Springer, 3-540-38990-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
41 | Jiawei Luo, Xizhen Zhang |
A Novel Method for Constructing Phylogenetic Tree Based on 3D Graphical Representation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIMCA/IAWTIC ![In: 2006 International Conference on Computational Intelligence for Modelling Control and Automation (CIMCA 2006), International Conference on Intelligent Agents, Web Technologies and Internet Commerce (IAWTIC 2006), 29 November - 1 December 2006, Sydney, Australia, pp. 244, 2006, IEEE Computer Society, 0-7695-2731-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
41 | Daniel H. Huson, Mike A. Steel, Jim Whitfield |
Reducing Distortion in Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 6th International Workshop, WABI 2006, Zurich, Switzerland, September 11-13, 2006, Proceedings, pp. 150-161, 2006, Springer, 3-540-39583-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
41 | Sun-Yuan Hsieh |
Linear-Time Algorithms for Two Subtree-Comparison Problems on Phylogenetic Trees with Different Species. ![Search on Bibsonomy](Pics/bibsonomy.png) |
FSTTCS ![In: FSTTCS 2006: Foundations of Software Technology and Theoretical Computer Science, 26th International Conference, Kolkata, India, December 13-15, 2006, Proceedings, pp. 164-175, 2006, Springer, 3-540-49994-6. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
41 | Trinh N. D. Huynh, Jesper Jansson 0001, Nguyen Bao Nguyen, Wing-Kin Sung |
Constructing a Smallest Refining Galled Phylogenetic Network. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 9th Annual International Conference, RECOMB 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings, pp. 265-280, 2005, Springer, 3-540-25866-3. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Dan Gusfield, Vikas Bansal 0001 |
A Fundamental Decomposition Theory for Phylogenetic Networks and Incompatible Characters. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 9th Annual International Conference, RECOMB 2005, Cambridge, MA, USA, May 14-18, 2005, Proceedings, pp. 217-232, 2005, Springer, 3-540-25866-3. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Usman Roshan, Dennis R. Livesay, David La |
Improved Phylogenetic Motif Detection Using Parsimony. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 19-21 October 2005, Minneapolis, MN, USA, pp. 19-26, 2005, IEEE Computer Society, 0-7695-2476-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Sergey Bereg, Kathryn Bean |
Constructing Phylogenetic Networks from Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 19-21 October 2005, Minneapolis, MN, USA, pp. 299-305, 2005, IEEE Computer Society, 0-7695-2476-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | M. A. H. Zahid, Ankush Mittal, Ramesh Chandra Joshi |
A Classification Based Approach for Root Unknown Phylogenetic Networks Under Constrained Recombination. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICDCIT ![In: Distributed Computing and Internet Technology, Second International Conference, ICDCIT 2005, Bhubaneswar, India, December 22-24, 2005, Proceedings, pp. 592-603, 2005, Springer, 3-540-30999-3. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Ho-Leung Chan, Jesper Jansson 0001, Tak Wah Lam, Siu-Ming Yiu |
Reconstructing an Ultrametric Galled Phylogenetic Network from a Distance Matrix. ![Search on Bibsonomy](Pics/bibsonomy.png) |
MFCS ![In: Mathematical Foundations of Computer Science 2005, 30th International Symposium, MFCS 2005, Gdansk, Poland, August 29 - September 2, 2005, Proceedings, pp. 224-235, 2005, Springer, 3-540-28702-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Robert S. Boyer, Warren A. Hunt Jr., Serita M. Nelesen |
A Compressed Format for Collections of Phylogenetic Trees and Improved Consensus Performance. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 5th International Workshop, WABI 2005, Mallorca, Spain, October 3-6, 2005, Proceedings, pp. 353-364, 2005, Springer, 3-540-29008-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
41 | Isabelle Bichindaritz, Stephen Potter |
Knowledge Based Phylogenetic Classification Mining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICDM ![In: Advances in Data Mining, Applications in Image Mining, Medicine and Biotechnology, Management and Environmental Control, and Telecommunications, 4th Industrial Conference on Data Mining, ICDM 2004, Leipzig, Germany, July 4-7, 2004, Revised Selected Papers, pp. 163-172, 2004, Springer, 3-540-24054-3. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
41 | Bing Bing Zhou, Michael Till, Albert Y. Zomaya, Lars S. Jermiin |
Parallel Implementation of Maximum Likelihood Methods for Phylogenetic Analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS ![In: 18th International Parallel and Distributed Processing Symposium (IPDPS 2004), CD-ROM / Abstracts Proceedings, 26-30 April 2004, Santa Fe, New Mexico, USA, 2004, IEEE Computer Society, 0-7695-2132-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
41 | Daichi Shigemizu, Osamu Maruyama |
Searching for Regulatory Elements of Alternative Splicing Events Using Phylogenetic Footprinting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 4th International Workshop, WABI 2004, Bergen, Norway, September 17-21, 2004, Proceedings, pp. 147-158, 2004, Springer, 3-540-23018-1. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
41 | Jesper Jansson 0001, Wing-Kin Sung |
Inferring a Level-1 Phylogenetic Network from a Dense Set of Rooted Triplets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
COCOON ![In: Computing and Combinatorics, 10th Annual International Conference, COCOON 2004, Jeju Island, Korea, August 17-20, 2004, Proceedings, pp. 462-472, 2004, Springer, 3-540-22856-X. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
41 | Tatsuie Tsukiji, Zhi-Zhong Chen |
Computing Phylogenetic Roots with Bounded Degrees and Errors Is Hard. ![Search on Bibsonomy](Pics/bibsonomy.png) |
COCOON ![In: Computing and Combinatorics, 10th Annual International Conference, COCOON 2004, Jeju Island, Korea, August 17-20, 2004, Proceedings, pp. 450-461, 2004, Springer, 3-540-22856-X. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
41 | Gerton Lunter, István Miklós, Alexei J. Drummond, Jens Ledet Jensen, Jotun Hein |
Bayesian Phylogenetic Inference under a Statistical Insertion-Deletion Model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, Third International Workshop, WABI 2003, Budapest, Hungary, September 15-20, 2003, Proceedings, pp. 228-244, 2003, Springer, 3-540-20076-2. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
41 | Huiyuan Shan, Katherine G. Herbert, William H. Piel, Dennis E. Shasha, Jason Tsong-Li Wang |
A Structure-Based Search Engine for Phylogenetic Databases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SSDBM ![In: Proceedings of the 14th International Conference on Scientific and Statistical Database Management, July 24-26, 2002, Edinburgh, Scotland, UK, pp. 7-10, 2002, IEEE Computer Society, 0-7695-1632-7. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
41 | Craig A. Stewart, David Hart, Donald K. Berry, Gary J. Olsen, Eric A. Wernert, William Fischer 0002 |
Parallel implementation and performance of fastDNAml: a program for maximum likelihood phylogenetic inference. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SC ![In: Proceedings of the 2001 ACM/IEEE conference on Supercomputing, Denver, CO, USA, November 10-16, 2001, CD-ROM, pp. 20, 2001, ACM, 1-58113-293-X. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
scalability, bioinformatics, maximum likelihood, parallel applications, phylogenetics |
41 | Daniel H. Huson, Kelly Ann Smith, Tandy J. Warnow |
Estimating Large Distances in Phylogenetic Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WAE ![In: Algorithm Engineering, 3rd International Workshop, WAE '99, London, UK, July 19-21, 1999, Proceedings, pp. 272-286, 1999, Springer, 3-540-66427-0. The full citation details ...](Pics/full.jpeg) |
1999 |
DBLP BibTeX RDF |
|
41 | Mark J. Clement, Quinn Snell, Glenn Judd, Michael Whiting |
High Performance Phylogenetic Inference. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HPDC ![In: Proceedings of the Eighth IEEE International Symposium on High Performance Distributed Computing, HPDC'99, Redondo Beach, California, USA, August 3-6, 1999., pp. 335-336, 1999, IEEE Computer Society, 0-7695-0287-3. The full citation details ...](Pics/full.jpeg) |
1999 |
DBLP DOI BibTeX RDF |
|
41 | Joaquín Dopazo, Huaichun Wang, José María Carazo |
A New Type of Unsupervised Growing Neural Network for Biological Sequence Classification That Adopts the Topology of a Phylogenetic Tree. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IWANN ![In: Biological and Artificial Computation: From Neuroscience to Technology, International Work-Conference on Artificial and Natural Neural Networks, IWANN '97, Lanzarote, Canary Islands, Spain, June 4-6, 1997, Proceedings, pp. 932-941, 1997, Springer, 3-540-63047-3. The full citation details ...](Pics/full.jpeg) |
1997 |
DBLP DOI BibTeX RDF |
|
39 | Paul Grouchy, Jekanthan Thangavelautham, Gabriele M. T. D'Eleuterio |
An island model for high-dimensional genomes using phylogenetic speciation and species barcoding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Genetic and Evolutionary Computation Conference, GECCO 2009, Proceedings, Montreal, Québec, Canada, July 8-12, 2009, pp. 1355-1362, 2009, ACM, 978-1-60558-325-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
phylogenetic species concept, species barcoding, genetic algorithms, island model, parallel evolutionary algorithms, speciation |
39 | Philippe Gambette, Daniel H. Huson |
Improved Layout of Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 5(3), pp. 472-479, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
algorithms, graph drawing, phylogenetics, phylogenetic networks |
39 | Jakub Koperwas, Krzysztof Walczak 0002 |
Phylogenetic Trees Dissimilarity Measure Based on Strict Frequent Splits Set and Its Application for Clustering. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RSKT ![In: Rough Sets and Knowledge Technology, Third International Conference, RSKT 2008, Chengdu, China, May 17-19, 2008. Proceedings, pp. 604-611, 2008, Springer, 978-3-540-79720-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Leaf-labelled trees, Frequent subsplits, Clustering, Phylogenetic trees |
39 | Waldo Cancino Ticona, Alexandre C. B. Delbem |
A Multi-objective Evolutionary Approach for Phylogenetic Inference. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EMO ![In: Evolutionary Multi-Criterion Optimization, 4th International Conference, EMO 2007, Matsushima, Japan, March 5-8, 2007, Proceedings, pp. 428-442, 2007, Springer, 3-540-70927-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Genetic Algorithms, Multi-Objective Optimization, Phylogenetic Inference |
39 | Nicholas Eriksson |
Toric ideals of homogeneous phylogenetic models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISSAC ![In: Symbolic and Algebraic Computation, International Symposium ISSAC 2004, Santander, Spain, July 4-7, 2004, Proceedings, pp. 149-154, 2004, ACM, 1-58113-827-X. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
Gröbner bases, parametric inference, phylogenetic invariants, toric ideals |
39 | Mathieu Blanchette |
Algorithms for phylogenetic footprinting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fifth Annual International Conference on Computational Biology, RECOMB 2001, Montréal, Québec, Canada, April 22-25, 2001, pp. 49-58, 2001, ACM, 1-58113-353-7. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
phylogenetic footprinting, regulatory elements, algorithm, phylogeny, motif finding |
38 | Stefan Grünewald, Vincent Moulton |
Maximum Parsimony for Tree Mixtures. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(1), pp. 97-102, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Applications, Biology and genetics |
38 | Jie Zheng 0002, Igor B. Rogozin, Eugene V. Koonin, Teresa M. Przytycka |
A Rigorous Analysis of the Pattern of Intron Conservation Supports the Coelomata Clade of Animals. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics, RECOMB 2007 International Workshop, RECOMB-CG 2007, San Diego, CA, USA, September 16-18, 2007, Proceedings, pp. 177-191, 2007, Springer, 978-3-540-74959-2. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
38 | Xizhou Feng, Kirk W. Cameron, Carlos P. Sosa, Brian E. Smith |
Building the Tree of Life on Terascale Systems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS ![In: 21th International Parallel and Distributed Processing Symposium (IPDPS 2007), Proceedings, 26-30 March 2007, Long Beach, California, USA, pp. 1-10, 2007, IEEE. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
38 | Sen Zhang, Katherine G. Herbert, Jason T. L. Wang, William H. Piel, David R. B. Stockwell |
PhyloMiner: A Tool for Evolutionary Data Analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SSDBM ![In: 18th International Conference on Scientific and Statistical Database Management, SSDBM 2006, 3-5 July 2006, Vienna, Austria, Proceedings, pp. 129-132, 2006, IEEE Computer Society, 0-7695-2590-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|