Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
62 | Elizabeth S. Allman, John A. Rhodes |
The Identifiability of Covarion Models in Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(1), pp. 76-88, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Markov processes on trees, statistical consistency, phylogenetics |
57 | Michael Till, Bing Bing Zhou, Albert Y. Zomaya, Lars S. Jermiin |
Phylogenetic Analysis Using Maxmimum Likelihood Methods in Homogenous Parallel Environments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PDCAT ![In: Parallel and Distributed Computing: Applications and Technologies, 5th International Conference, PDCAT 2004, Singapore, December 8-10, 2004, Proceedings, pp. 274-279, 2004, Springer, 3-540-24013-6. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
ASA, parallel, SPMD, phylogenetics, super computing |
52 | Zhanshan (Sam) Ma, Axel W. Krings |
Survival Analysis Modeling of Phylogenetic and Coalescent Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMEI (1) ![In: Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, BMEI 2008, May 28-30, 2008, Sanya, Hainan, China - Volume 1, pp. 178-185, 2008, IEEE Computer Society, 978-0-7695-3118-2. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
40 | Dan Gusfield |
The Multi-State Perfect Phylogeny Problem with Missing and Removable Data: Solutions via Integer-Programming and Chordal Graph Theory. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 13th Annual International Conference, RECOMB 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings, pp. 236-252, 2009, Springer, 978-3-642-02007-0. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
graph triangulation, integer programming, computational biology, chordal graphs, phylogenetics, perfect phylogeny |
40 | Sandro Pirkwieser, Günther R. Raidl |
Finding consensus trees by evolutionary, variable neighborhood search, and hybrid algorithms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Genetic and Evolutionary Computation Conference, GECCO 2008, Proceedings, Atlanta, GA, USA, July 12-16, 2008, pp. 323-330, 2008, ACM, 978-1-60558-130-9. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
consensus tree problem, memetic algorithm, variable neighborhood search, hybrid methods, phylogenetics |
40 | Vincent Berry, François Nicolas |
Improved Parameterized Complexity of the Maximum Agreement Subtree and Maximum Compatible Tree Problems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 3(3), pp. 289-302, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
algorithms, pattern matching, trees, consensus, compatibility, fixed-parameter tractability, Phylogenetics |
40 | David Bryant, Vincent Moulton |
NeighborNet: An Agglomerative Method for the Construction of Planar Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, Second International Workshop, WABI 2002, Rome, Italy, September 17-21, 2002, Proceedings, pp. 375-391, 2002, Springer, 3-540-44211-1. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
SplitsTree, Networks, Hybridization, Phylogenetics, Neighbor-Joining |
40 | Craig A. Stewart, David Hart, Donald K. Berry, Gary J. Olsen, Eric A. Wernert, William Fischer 0002 |
Parallel implementation and performance of fastDNAml: a program for maximum likelihood phylogenetic inference. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SC ![In: Proceedings of the 2001 ACM/IEEE conference on Supercomputing, Denver, CO, USA, November 10-16, 2001, CD-ROM, pp. 20, 2001, ACM, 1-58113-293-X. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
scalability, bioinformatics, maximum likelihood, parallel applications, phylogenetics |
40 | David R. B. Stockwell, Jason T. L. Wang |
Biomonitoring, Phylogenetics and Anomaly Aggregation Systems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISI ![In: Intelligence and Security Informatics, IEEE International Conference on Intelligence and Security Informatics, ISI 2005, Atlanta, GA, USA, May 19-20, 2005, Proceedings, pp. 523-529, 2005, Springer, 3-540-25999-6. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
34 | Yong-Hyuk Kim, Seung-Kyu Lee, Byung Ro Moon |
Optimizing the Order of Taxon Addition in Phylogenetic Tree Construction Using Genetic Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Genetic and Evolutionary Computation - GECCO 2003, Genetic and Evolutionary Computation Conference, Chicago, IL, USA, July 12-16, 2003. Proceedings, Part II, pp. 2168-2178, 2003, Springer, 3-540-40603-4. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
22 | Mukul S. Bansal, Oliver Eulenstein, André Wehe |
The Gene-Duplication Problem: Near-Linear Time Algorithms for NNI-Based Local Searches. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(2), pp. 221-231, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Computational phylogenetics, {tt NNI}, local search, gene-duplication, supertrees |
22 | David Bryant, Mike A. Steel |
Computing the Distribution of a Tree Metric. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(3), pp. 420-426, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
discrete mathematics applications, Robinson-Foulds distance, Poisson approximation, trees, Biology and genetics, phylogenetics, normalization constant |
22 | Yasin Bakis, Osman Ugur Sezerman, M. Tekin Babaç, Cem Meydan |
Optimization of morphological data in numerical taxonomy analysis using genetic algorithms feature selection method. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO (Companion) ![In: Genetic and Evolutionary Computation Conference, GECCO 2009, Proceedings, Montreal, Québec, Canada, July 8-12, 2009, Companion Material, pp. 1967-1970, 2009, ACM, 978-1-60558-505-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
morphological data, genetic algorithms, optimization, phylogenetics, biological data mining |
22 | Mukul S. Bansal, Oliver Eulenstein |
An Omega(n^2/ log n) Speed-Up of TBR Heuristics for the Gene-Duplication Problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 5(4), pp. 514-524, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Algorithms, Computational Biology, Phylogenetics, Gene Duplication, Supertrees |
22 | Ravi Vijaya Satya, Amar Mukherjee |
The Undirected Incomplete Perfect Phylogeny Problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 5(4), pp. 618-629, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Incomplete Perfect Phylogeny, Phylogenetics, Haplotype Inference, Perfect Phylogeny |
22 | Philippe Gambette, Daniel H. Huson |
Improved Layout of Phylogenetic Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 5(3), pp. 472-479, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
algorithms, graph drawing, phylogenetics, phylogenetic networks |
22 | Elchanan Mossel |
Distorted Metrics on Trees and Phylogenetic Forests. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(1), pp. 108-116, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
CFN, Jukes-Cantor, metric, tree, distortion, Phylogenetics, forest |
22 | Jonathan D. Marra, Katherine G. Herbert, Jason T. L. Wang |
A study of phylogenetic tools for genomic nomenclature data cleaning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ITiCSE ![In: Proceedings of the 12th Annual SIGCSE Conference on Innovation and Technology in Computer Science Education, ITiCSE 2007, Dundee, Scotland, UK, June 25-27, 2007, pp. 347, 2007, ACM, 978-1-59593-610-3. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
genomic nomenclature, data cleaning, phylogenetics |
22 | Róbert Busa-Fekete, András Kocsor, Csaba Bagyinka |
A Multi-Stack Based Phylogenetic Tree Building Method. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings, pp. 49-60, 2007, Springer, 978-3-540-72030-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
tree estimation, Multi-Stack, tree-joining operator, Phylogenetics |
22 | Warren A. Hunt Jr., Serita M. Nelesen |
Phylogenetic trees in ACL2. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACL2 ![In: Proceedings of the Sixth International Workshop on the ACL2 Theorem Prover and its Applications, ACL2 2006, Seattle, Washington, USA, August 15-16, 2006, pp. 99-102, 2006, ACM, 0-9788493-0-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
ACL2, phylogenetics |
22 | Constantinos Daskalakis, Elchanan Mossel, Sébastien Roch |
Optimal phylogenetic reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
STOC ![In: Proceedings of the 38th Annual ACM Symposium on Theory of Computing, Seattle, WA, USA, May 21-23, 2006, pp. 159-168, 2006, ACM, 1-59593-134-1. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
CFN model, Jukes Cantor, reconstruction problem, phase transitions, phylogenetics, Ising model |
22 | Jonathan H. Badger, Paul E. Kearney |
Picking fruit from the tree of life: comments on taxonomic sampling and quartet methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2001 ACM Symposium on Applied Computing (SAC), March 11-14, 2001, Las Vegas, NV, USA, pp. 61-67, 2001, ACM, 1-58113-287-5. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
quarter methods, taxonomic sampling, phylogenetics |
22 | Alina F. Leuchtenberger, Arndt von Haeseler |
Learning From an Artificial Neural Network in Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 21(2), pp. 278-288, March - April 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
22 | Joey McCollum, Robert Turnbull |
Using Bayesian phylogenetics to infer manuscript transmission history. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Digit. Scholarsh. Humanit. ![In: Digit. Scholarsh. Humanit. 39(1), pp. 258-279, 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
22 | Sanket Wagle, Alexey Markin, Pawel Górecki 0001, Tavis K. Anderson, Oliver Eulenstein |
Asymmetric Cluster-Based Measures for Comparative Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 31(4), pp. 312-327, 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
22 | Yoav Dvir, Shelly Brezner, Sagi Snir |
Gene-Adjacency-Based Phylogenetics Under a Stochastic Gain-Loss Model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics - 21st International Conference, RECOMB-CG 2024, Boston, MA, USA, April 27-28, 2024, Proceedings, pp. 69-85, 2024, Springer, 978-3-031-58071-0. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
22 | Reinout Corts, Nikolaos Alachiotis 0001 |
A Survey of Processing Systems for Phylogenetics and Population Genetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACM Trans. Reconfigurable Technol. Syst. ![In: ACM Trans. Reconfigurable Technol. Syst. 16(3), pp. 35:1-35:27, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
22 | Nhan Ly-Trong, Giuseppe M. J. Barca, Bui Quang Minh |
AliSim-HPC: parallel sequence simulator for phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(9), September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
22 | Guy Katriel, Udi Mahanaymi, Christoph Koutschan, Doron Zeilberger, Mike Steel, Sagi Snir |
Using Generating Functions to Prove Additivity of Gene-Neighborhood Based Phylogenetics - Extended Abstract. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications - 19th International Symposium, ISBRA 2023, Wrocław, Poland, October 9-12, 2023, Proceedings, pp. 120-135, 2023, Springer, 978-981-99-7073-5. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
22 | Ghazaleh Parvini, Katherine Braught, David Fernández-Baca |
Checking Phylogenetics Decisiveness in Theory and in Practice. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 19(6), pp. 3307-3316, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Cheng Ye, Bryan Thornlow, Angie S. Hinrichs, Alexander Kramer, Cade Mirchandani, Devika Torvi, Robert Lanfear, Russell Corbett-Detig, Yatish Turakhia |
matOptimize: a parallel tree optimization method enables online phylogenetics for SARS-CoV-2. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(15), pp. 3734-3740, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Simone Marini, Carla Mavian, Alberto Riva, Mattia Prosperi, Marco Salemi, Brittany Rife Magalis |
Optimizing viral genome subsampling by genetic diversity and temporal distribution (TARDiS) for phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(3), pp. 856-860, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Steven Kelk, Simone Linz, Ruben Meuwese |
Deep kernelization for the Tree Bisection and Reconnnect (TBR) distance in phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2206.04451, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Zuher Jahshan, Leonid Yavits |
CoViT: Real-time phylogenetics for the SARS-CoV-2 pandemic using Vision Transformers. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2208.05004, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez, Leonel Sousa |
Exploiting multi-level parallel metaheuristics and heterogeneous computing to boost phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Future Gener. Comput. Syst. ![In: Future Gener. Comput. Syst. 127, pp. 208-224, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Mahmoud Kandeel, Wael El-Deeb |
Omicron variant receptor-binding domain phylogenetics and molecular dynamics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 146, pp. 105633, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Alvin Chon, Pawel Górecki 0001, Oliver Eulenstein, Xiaoqiu Huang 0001, Ali Jannesari |
Scalable and Extensible Robinson-Foulds for Comparative Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS Workshops ![In: IEEE International Parallel and Distributed Processing Symposium, IPDPS Workshops 2022, Lyon, France, May 30 - June 3, 2022, pp. 166-175, 2022, IEEE, 978-1-6654-9747-3. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Yatish Turakhia |
HiCOMB 2022 Invited Speaker: Pandemic-scale Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS Workshops ![In: IEEE International Parallel and Distributed Processing Symposium, IPDPS Workshops 2022, Lyon, France, May 30 - June 3, 2022, pp. 143, 2022, IEEE, 978-1-6654-9747-3. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
22 | Nikolaos Alachiotis 0001, Andreas Brokalakis, Vasilis Amourgianos, Sotiris Ioannidis, Pavlos Malakonakis, Tasos Bokalidis |
Accelerating Phylogenetics Using FPGAs in the Cloud. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Micro ![In: IEEE Micro 41(4), pp. 24-30, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
22 | Remco R. Bouckaert, Mareike Fischer 0001, Kristina Wicke |
Combinatorial perspectives on Dollo-k characters in phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Adv. Appl. Math. ![In: Adv. Appl. Math. 131, pp. 102252, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
22 | Kevin Shu, Andrew Ortegaray, Robert C. Berwick, Matilde Marcolli |
Phylogenetics of Indo-European Language Families via an Algebro-Geometric Analysis of Their Syntactic Structures. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Math. Comput. Sci. ![In: Math. Comput. Sci. 15(4), pp. 803-857, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
22 | Benjamin Hollering, Seth Sullivant |
Identifiability in phylogenetics using algebraic matroids. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Symb. Comput. ![In: J. Symb. Comput. 104, pp. 142-158, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
22 | Diptesh Kanojia |
Investigations into Distributional Semantics for Cognate Detection and Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2021 |
DOI RDF |
|
22 | Martin Frohn |
Models and methods for computational phylogenetics under minimum evolution. ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2021 |
RDF |
|
22 | Anastasios Stefanou |
Tree decomposition of Reeb graphs, parametrized complexity, and applications to phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Appl. Comput. Topol. ![In: J. Appl. Comput. Topol. 4(2), pp. 281-308, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
22 | Kristina Wicke, Mareike Fischer 0001 |
Combinatorial views on persistent characters in phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Adv. Appl. Math. ![In: Adv. Appl. Math. 119, pp. 102046, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
22 | Daniel Irving Bernstein |
L-Infinity Optimization to Bergman Fans of Matroids with an Application to Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SIAM J. Discret. Math. ![In: SIAM J. Discret. Math. 34(1), pp. 701-720, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
22 | Max E. Schön, Laura Eme, Thijs J. G. Ettema |
PhyloMagnet: fast and accurate screening of short-read meta-omics data using gene-centric phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(6), pp. 1718-1724, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
22 | Mingming Ren, Xiaomin Huang, Zhuofeng Wu 0002, Rebecca J. Stones, Xiaoguang Liu 0001, Gang Wang 0001 |
CuCodeML: GPU-Accelerated CodeML for the Branch-Site Model in Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISPA/BDCloud/SocialCom/SustainCom ![In: IEEE International Conference on Parallel & Distributed Processing with Applications, Big Data & Cloud Computing, Sustainable Computing & Communications, Social Computing & Networking, ISPA/BDCloud/SocialCom/SustainCom 2020, Exeter, United Kingdom, December 17-19, 2020, pp. 67-75, 2020, IEEE, 978-1-6654-1485-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
22 | Michael A. Charleston |
Molecular Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Encyclopedia of Bioinformatics and Computational Biology (2) ![In: Encyclopedia of Bioinformatics and Computational Biology - Volume 2, pp. 700-711, 2019, Elsevier, 978-0-12-811432-2. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
22 | Magnus Bordewich, Britta Dorn, Simone Linz, Rolf Niedermeier |
Algorithms and Complexity in Phylogenetics (Dagstuhl Seminar 19443). ![Search on Bibsonomy](Pics/bibsonomy.png) |
Dagstuhl Reports ![In: Dagstuhl Reports 9(10), pp. 134-151, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
22 | Lev Michael, Natalia Chousou-Polydouri |
Computational phylogenetics and the classification of South American languages. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Lang. Linguistics Compass ![In: Lang. Linguistics Compass 13(12), 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
22 | Emmanuel Paradis, Klaus Schliep |
ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 35(3), pp. 526-528, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
22 | Frederick A. Matsen IV, Sara C. Billey, Arnold Kas, Matjaz Konvalinka |
Tanglegrams: A Reduction Tool for Mathematical Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 15(1), pp. 343-349, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
22 | Stephen D. Shank, Steven Weaver, Sergei L. Kosakovsky Pond |
phylotree.js - a JavaScript library for application development and interactive data visualization in phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 19(1), pp. 276:1-276:5, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
22 | Nancy Retzlaff, Peter F. Stadler |
Phylogenetics beyond biology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Theory Biosci. ![In: Theory Biosci. 137(2), pp. 133-143, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
22 | Stilianos Louca, Michael Doebeli |
Efficient comparative phylogenetics on large trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(6), pp. 1053-1055, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
22 | Taraka Rama |
Three tree priors and five datasets: A study of the effect of tree priors in Indo-European phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1805.03645, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP BibTeX RDF |
|
22 | Guillaume E. Scholz |
New algorithms and mathematical tools for phylogenetics beyond trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2018 |
RDF |
|
22 | Guy Baele, Philippe Lemey, Andrew Rambaut, Marc A. Suchard |
Adaptive MCMC in Bayesian phylogenetics: an application to analyzing partitioned data in BEAST. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(12), pp. 1798-1805, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
22 | Kevin Shu, Andrew Ortegaray, Robert C. Berwick, Matilde Marcolli |
Phylogenetics of Indo-European Language families via an Algebro-Geometric Analysis of their Syntactic Structures. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1712.01719, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
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22 | Daniel L. Ayres, Michael P. Cummings |
Heterogeneous Hardware Support in BEAGLE, a High-Performance Computing Library for Statistical Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICPP Workshops ![In: 46th International Conference on Parallel Processing Workshops, ICPP Workshops 2017, Bristol, United Kingdom, August 14-17, 2017, pp. 23-32, 2017, IEEE Computer Society, 978-1-5386-1044-2. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
22 | Max H. Garzon, Sambriddhi Mainali |
Towards a Universal Genomic Positioning System: Phylogenetics and Species IDentification. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IWBBIO (2) ![In: Bioinformatics and Biomedical Engineering - 5th International Work-Conference, IWBBIO 2017, Granada, Spain, April 26-28, 2017, Proceedings, Part II, pp. 469-479, 2017, 978-3-319-56153-0. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
22 | Jun Zhou, Yu Lin 0001, Vaibhav Rajan, William Hoskins, Bing Feng, Jijun Tang |
Analysis of gene copy number changes in tumor phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithms Mol. Biol. ![In: Algorithms Mol. Biol. 11, pp. 26, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
22 | Martin Ryberg |
Phylommand - a command line software package for phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
F1000Research ![In: F1000Research 5, pp. 2903, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
22 | John J. Andersen, Bradley J. Nelson, Jeremy M. Brown |
EmpPrior: using outside empirical data to inform branch-length priors for Bayesian phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 17, pp. 253, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
22 | Peter Robinson 0003 |
Four rules for the application of phylogenetics in the analysis of textual traditions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Digit. Scholarsh. Humanit. ![In: Digit. Scholarsh. Humanit. 31(3), pp. 637-651, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
22 | Victor Hanson-Smith, Alexander Johnson |
PhyloBot: A Web Portal for Automated Phylogenetics, Ancestral Sequence Reconstruction, and Exploration of Mutational Trajectories. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 12(7), 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
22 | Cayla D. McBee, Tim Penttila |
Remarks on Hadamard conjugation and combinatorial phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Australas. J Comb. ![In: Australas. J Comb. 66, pp. 177-191, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP BibTeX RDF |
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22 | Diane Oyen, Blake Anderson, Christine M. Anderson-Cook |
Bayesian Networks with Prior Knowledge for Malware Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
AAAI Workshop: Artificial Intelligence for Cyber Security ![In: Artificial Intelligence for Cyber Security, Papers from the 2016 AAAI Workshop, Phoenix, Arizona, USA, February 12, 2016., 2016, AAAI Press. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP BibTeX RDF |
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22 | Salim Akhter Chowdhury, E. Michael Gertz, Darawalee Wangsa, Kerstin Heselmeyer-Haddad, Thomas Ried, Alejandro A. Schäffer, Russell Schwartz |
Inferring models of multiscale copy number evolution for single-tumor phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(12), pp. 258-267, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
22 | William D. Pearse, Marc W. Cadotte, Jeannine Cavender-Bares, Anthony R. Ives, Caroline M. Tucker, Steve C. Walker, Matthew R. Helmus |
pez: phylogenetics for the environmental sciences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(17), pp. 2888-2890, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
22 | Matthew Hall, Mark E. J. Woolhouse, Andrew Rambaut |
Epidemic Reconstruction in a Phylogenetics Framework: Transmission Trees as Partitions of the Node Set. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 11(12), 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
22 | Sandra A. Meid |
Split Analysis Methods and Parametric Bootstrapping in Molecular Phylogenetics: Taking a closer look at model adequacy. ![Search on Bibsonomy](Pics/bibsonomy.png) |
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2015 |
RDF |
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22 | Bernhard Misof, Karen Meusemann, Björn Marcus von Reumont, Patrick Kück, Sonja J. Prohaska, Peter F. Stadler |
A priori assessment of data quality in molecular phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithms Mol. Biol. ![In: Algorithms Mol. Biol. 9, pp. 22, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
22 | Bernhard Haubold |
Alignment-free phylogenetics and population genetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 15(3), pp. 407-418, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
22 | Luke Maurits, Thomas L. Griffiths 0001 |
Tracing the roots of syntax with Bayesian phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Proc. Natl. Acad. Sci. USA ![In: Proc. Natl. Acad. Sci. USA 111(37), pp. 13576-13581, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
22 | John A. Capra, Dennis Kostka |
Modeling DNA methylation dynamics with approaches from phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 30(17), pp. 408-414, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
22 | Neil C. A. Moore, Patrick Prosser |
The Ultrametric Constraint and its Application to Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1401.3438, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP BibTeX RDF |
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22 | Salim Akhter Chowdhury, Stanley E. Shackney, Kerstin Heselmeyer-Haddad, Thomas Ried, Alejandro A. Schäffer, Russell Schwartz |
Algorithms to Model Single Gene, Single Chromosome, and Whole Genome Copy Number Changes Jointly in Tumor Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 10(7), 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
22 | Blake Anderson, Terran Lane, Curtis Hash |
Malware Phylogenetics Based on the Multiview Graphical Lasso. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IDA ![In: Advances in Intelligent Data Analysis XIII - 13th International Symposium, IDA 2014, Leuven, Belgium, October 30 - November 1, 2014. Proceedings, pp. 1-12, 2014, Springer, 978-3-319-12570-1. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
22 | Mukul S. Bansal, Oliver Eulenstein |
Algorithms for Genome-Scale Phylogenetics Using Gene Tree Parsimony. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 10(4), pp. 939-956, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
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22 | Mehmood Alam Khan, Isaac Elias, Erik Sjölund, Kristina Nylander, Roman Valls Guimera, Richard Schobesberger, Peter Schmitzberger, Jens Lagergren, Lars Arvestad |
fastphylo: Fast tools for phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 14, pp. 334, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
|
22 | Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez |
Parallelizing a multiobjective swarm intelligence approach to phylogenetics using hybrid MPI/OpenMP schemes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EuroMPI ![In: 20th European MPI Users's Group Meeting, EuroMPI '13, Madrid, Spain - September 15 - 18, 2013, pp. 193-198, 2013, ACM, 978-1-4503-1903-4. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
|
22 | Mark A. Miller, Terri Schwartz, Wayne Pfeiffer |
Embedding CIPRES science gateway capabilities in phylogenetics software environments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
XSEDE ![In: Extreme Science and Engineering Discovery Environment: Gateway to Discovery, XSEDE13, San Diego, CA, USA - July 22 - 25, 2013, pp. 40:1-40:8, 2013, ACM, 978-1-4503-2170-9. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
|
22 | Ana Brândusa Pavel, Cristian Ioan Vasile |
PyElph - a software tool for gel images analysis and phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 13, pp. 9, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
22 | A. P. Jason de Koning, Wanjun Gu, Todd A. Castoe, David D. Pollock |
Phylogenetics, likelihood, evolution and complexity. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 28(22), pp. 2989-2990, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
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22 | Andrei-Alin Popescu, Katharina T. Huber, Emmanuel Paradis |
ape 3.0: New tools for distance-based phylogenetics and evolutionary analysis in R. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 28(11), pp. 1536-1537, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
22 | David Bryant, Mike A. Steel |
'Bureaucratic' set systems, and their role in phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Appl. Math. Lett. ![In: Appl. Math. Lett. 25(8), pp. 1148-1152, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
22 | Jiajie Zhang, Alexandros Stamatakis |
The Multi-Processor Scheduling Problem in Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS Workshops ![In: 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, IPDPS 2012, Shanghai, China, May 21-25, 2012, pp. 691-698, 2012, IEEE Computer Society, 978-1-4673-0974-5. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
22 | Mark A. Miller, Wayne Pfeiffer, Terri Schwartz |
The CIPRES science gateway: enabling high-impact science for phylogenetics researchers with limited resources. ![Search on Bibsonomy](Pics/bibsonomy.png) |
XSEDE ![In: Proceedings of the 1st Conference of the Extreme Science and Engineering Discovery Environment - Bridging from the eXtreme to the campus and beyond, XSEDE '12, Chicago, Illinois, USA, July 16-20, 2012, pp. 39:1-39:8, 2012, ACM, 978-1-4503-1602-6. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
22 | Bertrand Schneider |
Designing tabletop activities for inquiry-based learning: lessons from phylogenetics, neuroscience and logistics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ITS ![In: Interactive Tabletops and Surfaces, ITS'12, Cambridge/Boston, MA, USA, November 11-14, 2012, pp. 289-294, 2012, ACM, 978-1-4503-1209-7. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
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22 | Zhen Meng, Jianhui Li, Yunchun Zhou, Wei Cao, Xiao Xiao, Jing Zhao, Hui Dong, Shouzhou Zhang |
GSQCT: A solution to screening gene sequences for phylogenetics analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
FSKD ![In: 9th International Conference on Fuzzy Systems and Knowledge Discovery, FSKD 2012, 29-31 May 2012, Chongqing, China, pp. 2929-2933, 2012, IEEE, 978-1-4673-0025-4. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
22 | Aaron Douglas Kleinman |
Combinatorial Phylogenetics of Reconstruction Algorithms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2012 |
RDF |
|
22 | Patrick Kück |
Homology Assessment in Molecular Phylogenetics : Evaluation, Improvement, and Influence of Data Quality on Tree Reconstruction ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2012 |
RDF |
|
22 | Alexandros Stamatakis |
Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Encyclopedia of Parallel Computing ![In: Encyclopedia of Parallel Computing, pp. 1545-1554, 2011, Springer, 978-0-387-09765-7. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
|
22 | Tamir Tuller, Elchanan Mossel |
Co-evolution Is Incompatible with the Markov Assumption in Phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 8(6), pp. 1667-1670, 2011. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
|
22 | Alexandros Stamatakis, Fernando Izquierdo-Carrasco |
Result verification, code verification and computation of support values in phylogenetics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 12(3), pp. 270-279, 2011. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
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22 | Bongsoo Park, Jongsun Park 0002, Kyeong-Chae Cheong, Jaeyoung Choi, Kyongyong Jung, Donghan Kim, Yong-Hwan Lee, Todd J. Ward, Kerry O'Donnell, David M. Geiser, Seogchan Kang |
Cyber infrastructure for Fusarium: three integrated platforms supporting strain identification, phylogenetics, comparative genomics and knowledge sharing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 39(Database-Issue), pp. 640-646, 2011. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
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22 | Rubén Sánchez, François Serra, Joaquín Tárraga, Ignacio Medina, José Carbonell, Luis Pulido, Alejandro de María, Salvador Capella-Gutiérrez, Jaime Huerta-Cepas, Toni Gabaldón, Joaquín Dopazo, Hernán Dopazo |
Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 39(Web-Server-Issue), pp. 470-474, 2011. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
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