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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
Group by:
The graphs summarize 2354 occurrences of 1007 keywords
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Results
Found 18688 publication records. Showing 18688 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
139 | Kang-Ping Liu, Jinn-Moon Yang |
A Gaussian Evolutionary Method for Predicting Protein-Protein Interaction Sites. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EvoBIO ![In: Evolutionary Computation,Machine Learning and Data Mining in Bioinformatics, 5th European Conference, EvoBIO 2007, Valencia, Spain, April 11-13, 2007, Proceedings, pp. 143-154, 2007, Springer, 978-3-540-71782-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Atomic solvation parameter, Gaussian evolutionary method, protein-protein binding site, protein-protein interactions |
136 | Scooter Willis |
Protein CorreLogo: an X3D representation of co-evolving pairs, tertiary structure, ligand binding pockets and protein-protein interactions in protein families. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Web3D ![In: Proceeding of the Twelfth International Conference on 3D Web Technology, Web3D 2007, Perugia, Italy, April 15-18, 2007, pp. 71-80, 2007, ACM, 978-1-59593-652-3. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Protein CorreLogo, mutual information, X3D |
112 | Minghua Deng, Shipra Mehta, Fengzhu Sun, Ting Chen 0006 |
Inferring domain-domain interactions from protein-protein interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sixth Annual International Conference on Computational Biology, RECOMB 2002, Washington, DC, USA, April 18-21, 2002, pp. 117-126, 2002, ACM, 1-58113-498-3. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
112 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001, Baldev S. Sidhu |
Protein Ontology: Vocabulary for Protein Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICITA (1) ![In: Third International Conference on Information Technology and Applications (ICITA 2005), 4-7 July 2005, Sydney, Australia, pp. 465-469, 2005, IEEE Computer Society, 0-7695-2316-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Protein Informatics, Biomedical Systems, Data Integration, Systems Biology, Biomedical Ontologies, Protein Ontology |
102 | Minghua Deng, Kui Zhang, Shipra Mehta, Ting Chen 0006, Fengzhu Sun |
Prediction of Protein Function Using Protein-Protein Interaction Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 1st IEEE Computer Society Bioinformatics Conference, CSB 2002, Stanford, CA, USA, August 14-16, 2002, pp. 197-206, 2002, IEEE Computer Society, 0-7695-1653-X. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
101 | Huang-Cheng Kuo, Kuan-Yu Su, Ping-Lin Ong, Jen-Peng Huang |
Learning a prediction model for protein-protein recognition. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIS ![In: Proceedings of the 2nd International Conference on Interaction Sciences: Information Technology, Culture and Human (ICIS 2009), Seoul, Korea, 24-26 November 2009, pp. 736-741, 2009, ACM, 978-1-60558-710-3. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
protein complex, protein-protein recognition, genetic programming, feature vector, binding site |
95 | Yasir Arafat, Gour C. Karmakar, Joarder Kamruzzaman, Juan Fernández-Recio |
Predicting Protein-Protein Interface using Desolvation Energy Similarity Matching. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBCB ![In: Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2006, Renaissance Hotel Downtown, Toronto, Ontario, Canada, September 28-29, 2006, pp. 1-8, 2006, IEEE, 1-4244-0623-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
93 | Christopher J. O. Baker, René Witte |
Mutation Mining-A Prospector's Tale. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Inf. Syst. Frontiers ![In: Inf. Syst. Frontiers 8(1), pp. 47-57, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
Protein structure annotation, Protein mutation, Haloalkane dehalogenase, Biphenyl dioxygenase, Xylanase, Data mining, Text mining |
91 | Lisa Bartoli, Pier Luigi Martelli, Ivan Rossi, Piero Fariselli, Rita Casadio |
Prediction of Protein-Protein Interacting Sites: How to Bridge Molecular Events to Large Scale Protein Interaction Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CMSB ![In: Computational Methods in Systems Biology, 7th International Conference, CMSB 2009, Bologna, Italy, August 31-September 1, 2009. Proceedings, pp. 1-17, 2009, Springer, 978-3-642-03844-0. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
protein-protein interaction site, patch smoothing, neural network, interacting surfaces |
90 | Hiroshi Mamitsuka |
Essential Latent Knowledge for Protein-Protein Interactions: Analysis by an Unsupervised Learning Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 2(2), pp. 119-130, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
data mining, machine learning, Biology and genetics, mining methods and algorithms |
90 | Tuan Nam Tran, Kenji Satou, Tu Bao Ho |
Using Inductive Logic Programming for Predicting Protein-Protein Interactions from Multiple Genomic Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PKDD ![In: Knowledge Discovery in Databases: PKDD 2005, 9th European Conference on Principles and Practice of Knowledge Discovery in Databases, Porto, Portugal, October 3-7, 2005, Proceedings, pp. 321-330, 2005, Springer, 3-540-29244-6. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
90 | Alexandre G. de Brevern, Serge A. Hazout |
Hybrid Protein Model (HPM): A Method to Compact Protein 3D-Structure Information and Physicochemical Properties. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SPIRE ![In: Seventh International Symposium on String Processing and Information Retrieval, SPIRE 2000, A Coruña, Spain, September 27-29, 2000, pp. 49-54, 2000, IEEE Computer Society, 0-7695-0746-8. The full citation details ...](Pics/full.jpeg) |
2000 |
DBLP DOI BibTeX RDF |
Hybrid Protein Model, protein 3D-structure, physicochemical properties, protein 1D-sequence, structural alphabet, unsupervised classifier, protein blocks, sequence information, amino acid residues, pattern matching, fuzzy model, biology computing, Bayesian approach, structural biology |
89 | William Novak, Hongming Wang, Goran Krilov |
Role of protein flexibility in the design of Bcl-XL targeting agents: insight from molecular dynamics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Aided Mol. Des. ![In: J. Comput. Aided Mol. Des. 23(1), pp. 49-61, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Protein flexibility, Protein-protein interfaces, Bcl-XL, Ligand-protein interactions, ABT-737, Molecular dynamics |
85 | Ozlem Keskin, Attila Gürsoy, Ruth Nussinov |
Principles of Protein Recognition and Properties of Protein-protein Interfaces. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 53-65, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
84 | Serdar Cakici, Selcuk Sumengen, Osman Ugur Sezerman, Selim Balcisoy |
DockPro: a VR-based tool for protein-protein docking problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
VRCAI ![In: Proceedings of the 7th International Conference on Virtual Reality Continuum and its Applications in Industry, VRCAI 2008, Singapore, December 8-9, 2008, 2008, ACM, 978-1-60558-335-8. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
medicine and healthcare, protein-protein docking, virtual reality |
82 | Minghua Deng, Ting Chen 0006, Fengzhu Sun |
An integrated probabilistic model for functional prediction of proteins. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sventh Annual International Conference on Computational Biology, RECOMB 2003, Berlin, Germany, April 10-13, 2003, pp. 95-103, 2003, ACM, 1-58113-635-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
function prediction, pfam domain, Markov random field, protein-protein interaction, Gibbs sampler |
80 | Chengbang Huang, Faruck Morcos, Simon P. Kanaan, Stefan Wuchty, Danny Z. Chen, Jesús A. Izaguirre |
Predicting Protein-Protein Interactions from Protein Domains Using a Set Cover Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(1), pp. 78-87, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
graph algorithms, genetics, biology, bioinformatics (genome or protein) databases, Computations on discrete structures |
80 | Md. Altaf-Ul-Amin, Toshihiro Koma, Ken Kurokawa, Shigehiko Kanaya |
Prediction of Protein Functions Based on Protein-Protein Interaction Networks: A Min-Cut Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICDE Workshops ![In: Proceedings of the 21st International Conference on Data Engineering Workshops, ICDE 2005, 5-8 April 2005, Tokyo, Japan, pp. 1156, 2005, IEEE Computer Society, 0-7695-2657-8. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
heuristic method, min-cut, protein function prediction, protein-protein interaction network |
79 | Dong-Soo Han, Hong-Soog Kim, Woo-Hyuk Jang, Sung-Doke Lee |
Domain Combination Based Protein-Protein Interaction Possibility Ranking Method. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 19-21 March 2004, Taichung, Taiwan, pp. 434-441, 2004, IEEE Computer Society, 0-7695-2173-8. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
79 | N. Rattanakronkul, T. Wattarujeekrit, Kitsana Waiyamai |
Predicting Protein Structural Class from Closed Protein Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PAKDD ![In: Advances in Knowledge Discovery and Data Mining, 7th Pacific-Asia Conference, PAKDD 2003, Seoul, Korea, April 30 - May 2, 2003, Proceedings, pp. 136-147, 2003, Springer, 3-540-04760-3. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
Protein Structural Class, Closed Sequence, Data Mining, Bioinformatics, CARs |
78 | Andrey A. Ivanov |
Explore Protein-Protein Interactions for Cancer Target Discovery Using the OncoPPi Portal. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 145-164, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Kalpana Raja, Jeyakumar Natarajan, Finn Kuusisto, John W. Steill, Ian Ross, James A. Thomson, Ron M. Stewart |
Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 13-34, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Yiwei Li, Lucian Ilie |
Predicting Protein-Protein Interactions Using SPRINT. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 1-11, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Jan Byska, Adam Jurcík, Katarína Furmanová, Barbora Kozlíková, Jan J. Palecek |
Visual Analysis of Protein-Protein Interaction Docking Models Using COZOID Tool. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 81-94, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Ina Koch, Oliver Philipp, Andrea Hamann, Heinz D. Osiewacz |
Reconstruction of Protein-Protein Interaction Networks Using Homology-Based Search: Application to the Autophagy Pathway of Aging in Podospora anserina. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 45-55, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Chiara Pastrello, Max Kotlyar, Igor Jurisica |
Informed Use of Protein-Protein Interaction Data: A Focus on the Integrated Interactions Database (IID). ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 125-134, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Gregorio Alanis-Lobato, Martin H. Schaefer 0001 |
Generation and Interpretation of Context-Specific Human Protein-Protein Interaction Networks with HIPPIE. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 135-144, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Farideh Halakou, Attila Gürsoy, Ozlem Keskin |
Embedding Alternative Conformations of Proteins in Protein-Protein Interaction Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 113-124, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
78 | Mona Singh 0001 |
From Protein Interaction Networks to Protein Function. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 139-162, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
78 | Nir Yosef, Eytan Ruppin, Roded Sharan |
Cross-Species Analysis of Protein-protein Interaction Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 163-185, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
78 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001 |
Ontological Foundation for Protein Data Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
OTM Workshops ![In: On the Move to Meaningful Internet Systems 2005: OTM 2005 Workshops, OTM Confederated International Workshops and Posters, AWeSOMe, CAMS, GADA, MIOS+INTEROP, ORM, PhDS, SeBGIS, SWWS, and WOSE 2005, Agia Napa, Cyprus, October 31 - November 4, 2005, Proceedings, pp. 916-925, 2005, Springer, 3-540-29739-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
78 | Byungkyu Park, Kyungsook Han |
Online Prediction of Interacting Proteins with a User-Specified Protein. ![Search on Bibsonomy](Pics/bibsonomy.png) |
International Conference on Computational Science (3) ![In: Computational Science - ICCS 2005, 5th International Conference, Atlanta, GA, USA, May 22-25, 2005, Proceedings, Part III, pp. 1028-1031, 2005, Springer, 3-540-26044-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
78 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001 |
Protein Ontology Project in 2007: Looking Backward and Forward. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CBMS ![In: 20th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2007), 20-22 June 2007, Maribor, Slovenia, pp. 607-611, 2007, IEEE Computer Society, 0-7695-2905-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Protein Informatics, Data Integration, Bioinformatics, Proteomics, Data Semantics, Biomedical Ontologies, Protein Ontology |
74 | Shi-Hua Zhang, Xue-Mei Ning, Hong-Wei Liu, Xiang-Sun Zhang |
Prediction of Protein Complexes Based on Protein Interaction Data and Functional Annotation Data Using Kernel Methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIC (3) ![In: Computational Intelligence and Bioinformatics, International Conference on Intelligent Computing, ICIC 2006, Kunming, China, August 16-19, 2006. Proceedings, Part III, pp. 514-524, 2006, Springer, 3-540-37277-6. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
74 | Zahra Nafar, Ashkan Golshani |
Data Mining Methods for Protein-Protein Interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CCECE ![In: Proceedings of the Canadian Conference on Electrical and Computer Engineering, CCECE 2006, May 7-10, 2006, Ottawa Congress Centre, Ottawa, Canada, pp. 991-994, 2006, IEEE, 1-4244-0038-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
74 | Haemoon Jung, Kyungsook Han |
Prediction of Protein Functions Using Protein Interaction Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
International Conference on Computational Science ![In: Computational Science - ICCS 2004, 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part II, pp. 317-324, 2004, Springer, 3-540-22115-8. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
74 | Hiroshi Mamitsuka |
Efficient Mining from Heterogeneous Data Sets for Predicting Protein-Protein Interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DEXA Workshops ![In: 14th International Workshop on Database and Expert Systems Applications (DEXA'03), September 1-5, 2003, Prague, Czech Republic, pp. 32-36, 2003, IEEE Computer Society, 0-7695-1993-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
72 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001 |
Creating a Protein Ontology Resource. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 220-221, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Protein Informatics, Biomedical Systems, Data Integration, Systems Biology, Biomedical Ontologies, Protein Ontology |
72 | Ryan H. Lilien, Brian W. Stevens, Amy C. Anderson, Bruce Randall Donald |
A novel ensemble-based scoring and search algorithm for protein redesign, and its application to modify the substrate specificity of the gramicidin synthetase a phenylalanine adenylation enzyme. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 46-57, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
enzyme design, fluorescence binding assay, molecular ensemble, non-ribosomal peptide synthetase, protein flexibility, protein-ligand binding, protein design |
72 | L. Paul Chew, Klara Kedem |
Finding the consensus shape for a protein family. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SCG ![In: Proceedings of the 18th Annual Symposium on Computational Geometry, Barcelona, Spain, June 5-7, 2002, pp. 64-73, 2002, ACM, 1-58113-504-1. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
protein alignment, protein families, unit-vector RMS, dynamic programming, protein structure, multiple alignment |
72 | Gordon M. Crippen |
Protein folding potential functions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 319-324, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
macromolecules, potential energy functions, intramolecular mechanics, protein structure recognition problem, globular protein sequence, plausible protein conformations, native conformation, single-chain proteins, nonnative structures, multichain aggregates, disulphide bonds, bound ligands, protein folding, proteins, potential functions, molecular configurations |
71 | Jung Eun Shim, Insuk Lee |
Construction of Functional Protein Networks Using Domain Profile Associations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 35-44, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
71 | Genki Terashi, Charles Christoffer, Daisuke Kihara |
Path-LZerD: Predicting Assembly Order of Multimeric Protein Complexes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 95-112, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
71 | Thomas Gueudré, Carlo Baldassi, Andrea Pagnani, Martin Weigt |
Predicting Interacting Protein Pairs by Coevolutionary Paralog Matching. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 57-65, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
71 | Alfonso Valencia, Florencio Pazos |
Computational Methods to Predict Protein Interaction Partners. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 67-81, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Frank Alber, Brian T. Chait, Michael P. Rout, Andrej Sali |
Integrative Structure Determination of Protein Assemblies by Satisfaction of Spatial Restraints. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 99-114, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Benjamin A. Shoemaker, Anna R. Panchenko |
Handling Diverse Protein Interaction Data: Integration, Storage and Retrieval. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 33-51, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Sergei Maslov |
Topological and Dynamical Properties of Protein Interaction Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 115-137, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Peter Uetz, Björn Titz, Gerard Cagney |
Experimental Methods for Protein Interaction Identification and Characterization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 1-32, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Katia S. Guimarães, Teresa M. Przytycka |
Protein Interaction Network Based Prediction of Domain-Domain and Domain-Peptide Interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-protein Interactions and Networks ![In: Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction, pp. 83-98, 2008, Springer, 978-1-84800-124-4. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
71 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001, Baldev S. Sidhu |
OWL, Proteins and Data Integration. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Australian Conference on Artificial Intelligence ![In: AI 2005: Advances in Artificial Intelligence, 18th Australian Joint Conference on Artificial Intelligence, Sydney, Australia, December 5-9, 2005, Proceedings, pp. 1158-1161, 2005, Springer, 3-540-30462-2. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
Information Retrieval, Knowledge Representation, Data Integration, Biomedical Ontologies, Protein Ontology |
69 | Susanne Eyrisch, Volkhard Helms |
What induces pocket openings on protein surface patches involved in protein-protein interactions? ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Aided Mol. Des. ![In: J. Comput. Aided Mol. Des. 23(2), pp. 73-86, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Binding pocket, CONCOORD, Normal mode analysis, Protein-protein interaction inhibition, Structure-based drug design, tCONCOORD, Molecular dynamics simulation |
68 | Xiang Guo, Hai Hu, Michael N. Liebman, Craig D. Shriver |
Semantic Similarity-based Validation of Human Protein-Protein Interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 149-150, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
68 | Kyungsook Han, Hyoungguen Kim |
A Mobile System for Extracting and Visualizing Protein-Protein Interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EurAsia-ICT ![In: EurAsia-ICT 2002: Information and Communication Technology, First EurAsian Conference, Shiraz, Iran, October 29-31, 2002, Proceedings, pp. 47-56, 2002, Springer, 3-540-00028-3. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
68 | Alvaro J. González, Li Liao |
Constrained Fisher Scores Derived from Interaction Profile Hidden Markov Models Improve Protein to Protein Interaction Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BICoB ![In: Bioinformatics and Computational Biology, First International Conference, BICoB 2009, New Orleans, LA, USA, April 8-10, 2009. Proceedings, pp. 236-247, 2009, Springer, 978-3-642-00726-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
3DID, Support vector machines, Hidden Markov models, Domains, Protein-protein interaction |
68 | Conrad Plake, Jörg Hakenberg, Ulf Leser |
Optimizing syntax patterns for discovering protein-protein interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2005 ACM Symposium on Applied Computing (SAC), Santa Fe, New Mexico, USA, March 13-17, 2005, pp. 195-201, 2005, ACM, 1-58113-964-0. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
syntax patterns, genetic algorithm, information extraction, protein-protein interactions |
68 | Darby Tien-Hao Chang, Chien-Yu Chen 0001, Yen-Jen Oyang, Hsueh-Fen Juan, Hsuan-Cheng Huang |
An Efficient Mechanism for Prediction of Protein-Ligand Interactions Based on Analysis of Protein Tertiary Substructures. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 19-21 March 2004, Taichung, Taiwan, pp. 427-433, 2004, IEEE Computer Society, 0-7695-2173-8. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
protein structural analysis, protein tertiary structure, kernel density estimation |
67 | Yaohang Li, Douglas Wardell, Vincent W. Freeh |
Resource-efficient computing paradigm for computational protein modeling applications. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IPDPS ![In: 23rd IEEE International Symposium on Parallel and Distributed Processing, IPDPS 2009, Rome, Italy, May 23-29, 2009, pp. 1-8, 2009, IEEE. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
67 | Jung-Hsien Chiang, Tsung-Lu Michael Lee |
In Silico Prediction of Human Protein Interactions Using Fuzzy-SVM Mixture Models and Its Application to Cancer Research. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Fuzzy Syst. ![In: IEEE Trans. Fuzzy Syst. 16(4), pp. 1087-1095, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
67 | Yi Pan 0001 |
Protein Structure Prediction and Its Understanding Based on Machine Learning Methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, USA, pp. 7, 2007, IEEE Computer Society, 978-1-4244-1509-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
67 | Byung-Hoon Park, Bing Zhang 0003, Tatiana V. Karpinets, Nagiza F. Samatova |
Multi-stage Framework to Infer Protein Functional Modules from Mass Spectrometry Pull-Down Data with Assessment of Biological Relevance. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007, Silicon Valley, CA, USA, November 2-4, 2007, pp. 223-229, 2007, IEEE Computer Society, 0-7695-3031-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
67 | Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001 |
Advances in Protein Ontology Project. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CBMS ![In: 19th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2006), 22-23 June 2006, Salt Lake City, Utah, USA, pp. 588-592, 2006, IEEE Computer Society, 978-0-7695-2517-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
67 | Amandeep S. Sidhu, Tharam S. Dillon, Farookh Khadeer Hussain |
Accomplishments and Challenges of Protein Ontology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
COMPSAC (1) ![In: 30th Annual International Computer Software and Applications Conference, COMPSAC 2006, Chicago, Illinois, USA, September 17-21, 2006. Volume 1, pp. 71-76, 2006, IEEE Computer Society, 0-7695-2655-1. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
67 | Namshik Han, Hyunwoo Kim, Kyungsook Han |
Computational Approach to Structural Analysis of Protein-RNA Complexes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
International Conference on Computational Science ![In: Computational Science - ICCS 2003, International Conference, Melbourne, Australia and St. Petersburg, Russia, June 2-4, 2003. Proceedings, Part III, pp. 140-150, 2003, Springer, 3-540-40196-2. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
67 | Dianhui Wang, Nung Kion Lee, Tharam S. Dillon, Nicholas J. Hoogenraad |
Protein Sequences Classification Using Modular RBF Neural Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Australian Joint Conference on Artificial Intelligence ![In: AI 2002: Advances in Artificial Intelligence, 15th Australian Joint Conference on Artificial Intelligence, Canberra, Australia, December 2-6, 2002, Proceedings, pp. 477-486, 2002, Springer, 3-540-00197-2. The full citation details ...](Pics/full.jpeg) |
2002 |
DBLP DOI BibTeX RDF |
|
67 | Yu-Feng Huang, Chia-Chen Chang, Chien-Kang Huang |
Massive Protein Structural Property Explorations Using New Indexing Mechanism. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ER Workshops ![In: Advances in Conceptual Modeling - Foundations and Applications, ER 2007 Workshops CMLSA, FP-UML, ONISW, QoIS, RIGiM,SeCoGIS, Auckland, New Zealand, November 5-9, 2007, Proceedings, pp. 14-23, 2007, Springer, 978-3-540-76291-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Residue environmental sphere (RES), protein structural property mining, residue contact, disulfide bond |
67 | Xue-wen Chen 0001, Mei Liu, Yong Hu 0002 |
Integrative Neural Network Approach for Protein Interaction Prediction from Heterogeneous Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ADMA ![In: Advanced Data Mining and Applications, 4th International Conference, ADMA 2008, Chengdu, China, October 8-10, 2008. Proceedings, pp. 532-539, 2008, Springer, 978-3-540-88191-9. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Interaction Network Prediction, Heterogeneous Data Integration, Integrative Neural Network, Protein-Protein Interaction |
67 | Kunpeng Zhang, Yun Xu, Yifei Shen, Guoliang Chen 0001 |
Using a Neural Networking Method to Predict the Protein Phosphorylation Sites with Specific Kinase. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISNN (2) ![In: Advances in Neural Networks - ISNN 2006, Third International Symposium on Neural Networks, Chengdu, China, May 28 - June 1, 2006, Proceedings, Part III, pp. 682-689, 2006, Springer, 3-540-34482-9. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
phosphorylation site predicting, protein kinase, PKA, IKK, Neural Network, protein structure |
67 | L. Paul Chew, Klara Kedem |
Finding the Consensus Shape for a Protein Family. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithmica ![In: Algorithmica 38(1), pp. 115-129, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
Protein shape, Dynamic programming, Protein structure, Computational molecular biology |
67 | Pengjun Pei, Aidong Zhang |
A Topological Measurement for Weighted Protein Interaction Network. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005, pp. 268-278, 2005, IEEE Computer Society, 0-7695-2344-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
weighted graph model, topological measurement, data integration, Protein-protein interaction, small world network, protein interaction network |
67 | Arvind Gupta, Ján Manuch, Ladislav Stacho |
Inverse Protein Folding in 2D HP Mode (Extended Abstract). ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 311-318, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
inverse protein folding, protein stability, protein design, HP model |
67 | Marcella A. McClure, Rajasekhar Raman |
Parameterization studies of hidden Markov models representing highly divergent protein sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 184-196, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
parameterization studies, highly divergent protein sequences, complex genome analysis, nucleic acid, molecular evolutionary mechanisms, homologous sequences, distantly related proteins, HMM approaches, multiple protein sequence alignment, highest average entropylposition model, biologically informative model, biological features, protein family, model length, training set size, biologically informative HMMs, hidden Markov models, hidden Markov models, DNA, genetics, genetics, biology computing, optimal model, protein sequences |
65 | Sonja Biedermann, Monika Henzinger, Christian Schulz 0003, Bernhard Schuster |
Vienna Graph Clustering. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 215-231, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Markus List, Nicolas Alcaraz, Richa Batra |
De Novo Pathway-Based Classification of Breast Cancer Subtypes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 201-213, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Angela Re, Paola Lecca |
On TD-WGcluster: Theoretical Foundations and Guidelines for the User. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 233-262, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Xiaoyang Jing, Hong Zeng, Sheng Wang 0001, Jinbo Xu |
A Web-Based Protocol for Interprotein Contact Prediction by Deep Learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 67-80, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Nicolas Alcaraz, Anne Hartebrodt, Markus List |
De Novo Pathway Enrichment with KeyPathwayMiner. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 181-199, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Wayne B. Hayes |
An Introductory Guide to Aligning Networks Using SANA, the Simulated Annealing Network Aligner. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 263-284, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
65 | Robin Haw, Fred Loney 0001, Edison Ong, Yongqun He, Guanming Wu |
Perform Pathway Enrichment Analysis Using ReactomeFIViz. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Protein-Protein Interaction Networks ![In: Protein-Protein Interaction Networks, Methods and Protocols., pp. 165-179, 2020, Springer, 978-1-4939-9872-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
64 | Hon Nian Chua, Wing-Kin Sung, Limsoon Wong |
Exploiting Indirect Neighbours and Topological Weight to Predict Protein Function from Protein-Protein Interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BioDM ![In: Data Mining for Biomedical Applications, PAKDD 2006 Workshop, BioDM 2006, Singapore, April 9, 2006, Proceedings, pp. 1, 2006, Springer, 3-540-33104-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
63 | Byungkyu Park, Kyungsook Han |
Estimating the Reliability of Protein-Protein Interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
FBIT ![In: Frontiers in the Convergence of Bioscience and Information Technologies 2007, FBIT 2007, Jeju Island, Korea, October 11-13, 2007, pp. 141-146, 2007, IEEE Computer Society, 978-0-7695-2999-8. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
63 | Junfeng Xia, Bing Wang 0004, De-Shuang Huang |
Inferring Strengths of Protein-Protein Interaction Using Artificial Neural Network. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IJCNN ![In: Proceedings of the International Joint Conference on Neural Networks, IJCNN 2007, Celebrating 20 years of neural networks, Orlando, Florida, USA, August 12-17, 2007, pp. 2471-2475, 2007, IEEE, 978-1-4244-1379-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
62 | Anna Antony, Srilaxmi Basetty, Shielly Hartanto, Mathew J. Palakal |
Computational approach to biological validation of protein-protein interactions discovered using literature mining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SAC ![In: Proceedings of the 2008 ACM Symposium on Applied Computing (SAC), Fortaleza, Ceara, Brazil, March 16-20, 2008, pp. 1302-1306, 2008, ACM, 978-1-59593-753-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
implicit associations, protein-protein interactions, association discovery, literature mining |
62 | Chishe Wang, Jiaxing Cheng, Shoubao Su, Dongzhe Xu |
Identification of Interface Residues Involved in Protein-Protein Interactions Using Naïve Bayes Classifier. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ADMA ![In: Advanced Data Mining and Applications, 4th International Conference, ADMA 2008, Chengdu, China, October 8-10, 2008. Proceedings, pp. 207-216, 2008, Springer, 978-3-540-88191-9. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Naïve Bayes classifier, Sequence profile, Residue accessible surface area, Protein-protein interactions |
62 | Max Kotlyar, Igor Jurisica |
Predicting Protein-Protein Interactions by Association Mining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Inf. Syst. Frontiers ![In: Inf. Syst. Frontiers 8(1), pp. 37-47, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
Protein-protein interactions, Association mining |
62 | Martin Farach-Colton, Yang Huang, John L. L. Woolford |
Discovering temporal relations in molecular pathways using protein-protein interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 150-156, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
molecular pathways, probe interval graphs, ribosomal assembly pathway, vertex ordering, interval graphs, protein-protein interaction |
62 | Roded Sharan, Trey Ideker, Brian P. Kelley, Ron Shamir, Richard M. Karp |
Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 282-289, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
heavy subgraph, protein complex, probabilistic model, conservation, comparative analysis, protein interaction network, yeast, bacteria |
61 | Yi Pan 0001 |
Protein structure prediction and understanding using machine learning methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GrC ![In: 2005 IEEE International Conference on Granular Computing, Beijing, China, July 25-27, 2005, pp. 13, 2005, IEEE, 0-7803-9017-2. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
61 | Zeyar Aung, Kian-Lee Tan |
Automatic Protein Structure Classification through Structural Fingerprinting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 19-21 March 2004, Taichung, Taiwan, pp. 508-515, 2004, IEEE Computer Society, 0-7695-2173-8. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
61 | Mona Singh 0001, Peter S. Kim |
Towards predicting coiled-coil protein interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Fifth Annual International Conference on Computational Biology, RECOMB 2001, Montréal, Québec, Canada, April 22-25, 2001, pp. 279-286, 2001, ACM, 1-58113-353-7. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
61 | Jinbo Xu, Bonnie Berger |
Fast and accurate algorithms for protein side-chain packing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. ACM ![In: J. ACM 53(4), pp. 533-557, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
Protein side-chain packing, approximate algorithm, polynomial-time approximation scheme, tree decomposition |
61 | Rolf Backofen, Sebastian Will |
A Constraint-Based Approach to Fast and Exact Structure Prediction in Three-Dimensional Protein Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Constraints An Int. J. ![In: Constraints An Int. J. 11(1), pp. 5-30, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
Face-centered cubic lattice, Constraint programming, Protein structure prediction, HP-model |
61 | Bill C. H. Chang, Asanga Ratnaweera, Saman K. Halgamuge, Harry C. Watson |
Particle Swarm Optimisation for Protein Motif Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Genet. Program. Evolvable Mach. ![In: Genet. Program. Evolvable Mach. 5(2), pp. 203-214, 2004. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
protein sequence motif, symbolic data optimisation, motif discovery, particle swarm optimisation |
61 | Michael A. Erdmann |
Protein similarity from knot theory and geometric convolution. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 195-204, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
writhing, homotopy, protein structure, homology, robot motion planning, knot theory |
61 | Virginio Cantoni, Riccardo Gatti, Luca Lombardi |
Towards Protein Interaction Analysis through Surface Labeling. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIAP ![In: Image Analysis and Processing - ICIAP 2009, 15th International Conference Vietri sul Mare, Italy, September 8-11, 2009, Proceedings, pp. 604-612, 2009, Springer, 978-3-642-04145-7. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
surface labeling, protein-protein interaction, heat diffusion |
61 | Angelo Marcello Anile, Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia, Salvatore Spinella |
Determination of protein structure and dynamics combining immune algorithms and pattern search methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nat. Comput. ![In: Nat. Comput. 6(1), pp. 55-72, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
pattern search methods, DIRECT, protein folding, protein structure prediction, Immune Algorithms, Clonal Selection Algorithms, structural bioinformatics |
61 | L. Paul Chew |
Exact computation of protein structure similarity. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SCG ![In: Proceedings of the 22nd ACM Symposium on Computational Geometry, Sedona, Arizona, USA, June 5-7, 2006, pp. 468-474, 2006, ACM, 1-59593-340-9. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
protein geometry, structure comparison, dynamic programming, global optimization, convex hull, proteins, protein structure, extreme points |
61 | Alexander Kister |
Relationship between Amino Acids Sequences and Protein Structures: Folding Patterns and Sequence Patterns. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, 5th International Symposium, ISBRA 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings, pp. 124-134, 2009, Springer, 978-3-642-01550-2. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Beta-sandwich proteins, supersecondary structure, protein structure classification, sequence alignment, protein folding, protein structure prediction |
61 | Mario Cannataro, Pietro Hiram Guzzi, Pierangelo Veltri |
myMCL: A Web Portal for Protein Complexes Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CBMS ![In: Proceedings of the Twenty-First IEEE International Symposium on Computer-Based Medical Systems, June 17-19, 2008, Jyväskylä, Finland, pp. 179-184, 2008, IEEE Computer Society, 978-0-7695-3165-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Protein to Protein Interactions, Protein Complexes, MCL, Clustering |
61 | Robert B. Russell, R. R. Copley, Geoffrey J. Barton |
Protein fold recognition from secondary structure assignments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS (5) ![In: 28th Annual Hawaii International Conference on System Sciences (HICSS-28), January 3-6, 1995, Kihei, Maui, Hawaii, USA, pp. 302-311, 1995, IEEE Computer Society, 0-8186-6945-4. The full citation details ...](Pics/full.jpeg) |
1995 |
DBLP DOI BibTeX RDF |
protein fold recognition, secondary structure assignments, experimental restraints, protein structural domains, predicted secondary structure elements, connected secondary structures, plausible topologies, E. coli bio protein, SH2 fold, database, query processing, database management systems, query, errors, biology computing, proteins, chemistry computing, query pattern, database structure |
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