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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 6 occurrences of 6 keywords
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Results
Found 67 publication records. Showing 67 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
153 | Anil Sorathiya, Pietro Liò, Luca Sguanci |
Mathematical Model of HIV Superinfection and Comparative Drug Therapy. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICARIS ![In: Artificial Immune Systems, 8th International Conference, ICARIS 2009, York, UK, August 9-12, 2009. Proceedings, pp. 41-53, 2009, Springer, 978-3-642-03245-5. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
viral dynamics, quasispecies, coinfection, superinfection, HAART, Maraviroc, Zinc-finger nucleases, HIV |
121 | Kelly Westbrooks, Irina Astrovskaya, David S. Campo, Yuri Khudyakov, Piotr Berman, Alexander Zelikovsky |
HCV Quasispecies Assembly Using Network Flows. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings, pp. 159-170, 2008, Springer, 978-3-540-79449-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
97 | Sheng-Lung Peng, Yu-Wei Tsay |
Verification of Pathotyping by Quasispecies Model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIC (1) ![In: Emerging Intelligent Computing Technology and Applications, 5th International Conference on Intelligent Computing, ICIC 2009, Ulsan, South Korea, September 16-19, 2009. Proceedings, pp. 138-145, 2009, Springer, 978-3-642-04069-6. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
49 | Vladimir G. Red'ko, Yuri Tsoy |
Estimation of the Evolution Speed for the Quasispecies Model: Arbitrary Alphabet Case. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICAISC ![In: Artificial Intelligence and Soft Computing - ICAISC 2006, 8th International Conference, Zakopane, Poland, June 25-29, 2006, Proceedings, pp. 460-469, 2006, Springer, 3-540-35748-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
48 | Julie Bernal, Trevor I. Dix, Lloyd Allison, Angeline Bartholomeusz, Lilly Yuen |
Modelling Hepatitis B Virus Antiviral Therapy and Drug Resistant Mutant Strains. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACAL ![In: Artificial Life: Borrowing from Biology, 4th Australian Conference, ACAL 2009, Melbourne, Australia, December 1-4, 2009. Proceedings, pp. 159-168, 2009, Springer, 978-3-642-10426-8. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
48 | Gabriela Ochoa, Klaus Jaffe |
Assortative Mating Drastically Alters the Magnitude of Error Thresholds. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PPSN ![In: Parallel Problem Solving from Nature - PPSN IX, 9th International Conference, Reykjavik, Iceland, September 9-13, 2006, Procedings, pp. 890-899, 2006, Springer, 3-540-38990-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
33 | Yoshiteru Ishida |
Symmetries on Asymmetric Wars: Generalists (HIVs) Versus Specialists (T-cells). ![Search on Bibsonomy](Pics/bibsonomy.png) |
KES (3) ![In: Knowledge-Based Intelligent Information and Engineering Systems, 11th International Conference, KES 2007, XVII Italian Workshop on Neural Networks, Vietri sul Mare, Italy, September 12-14, 2007, Proceedings, Part III, pp. 854-861, 2007, Springer, 978-3-540-74828-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
additive symmetry, asymmetric war, quasispecies, diversity |
25 | David S. Stevenson |
Modelling the structure and evolution of cultural information as quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Biosyst. ![In: Biosyst. 235, pp. 105104, January 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
25 | Borja Freire, Susana Ladra, José R. Paramá, Leena Salmela |
ViQUF: De Novo Viral Quasispecies Reconstruction Using Unitig-Based Flow Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 20(2), pp. 1550-1562, March - April 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
25 | Xiaoli Jiao, Hiromi Imamichi, Brad T. Sherman, Rishub Nahar, Robin L. Dewar, H. Clifford Lane, Tomozumi Imamichi, Weizhong Chang |
QuasiSeq: profiling viral quasispecies via self-tuning spectral clustering with PacBio long sequencing reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(12), pp. 3192-3199, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
25 | Hansheng Xue, Vaibhav Rajan, Yu Lin 0001 |
Graph Coloring via Neural Networks for Haplotype Assembly and Viral Quasispecies Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2210.12158, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
25 | Hansheng Xue, Vaibhav Rajan, Yu Lin 0001 |
Graph Coloring via Neural Networks for Haplotype Assembly and Viral Quasispecies Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
NeurIPS ![In: Advances in Neural Information Processing Systems 35: Annual Conference on Neural Information Processing Systems 2022, NeurIPS 2022, New Orleans, LA, USA, November 28 - December 9, 2022., 2022, 9781713871088. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP BibTeX RDF |
|
25 | Ziqi Ke, Haris Vikalo |
Deep learning for assembly of haplotypes and viral quasispecies from short and long sequencing reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BCB ![In: BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7 - 10, 2022, pp. 3:1-3:10, 2022, ACM, 978-1-4503-9386-7. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
|
25 | Sergey Knyazev, Lauren Hughes, Pavel Skums, Alexander Zelikovsky |
Epidemiological data analysis of viral quasispecies in the next-generation sequencing era. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 22(1), pp. 96-108, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
25 | Borja Freire, Susana Ladra, José R. Paramá, Leena Salmela |
Inference of viral quasispecies with a paired de Bruijn graph. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(4), pp. 473-481, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
25 | Borja Freire, Susana Ladra, José R. Paramá, Leena Salmela |
ViQUF: de novo Viral Quasispecies reconstruction using Unitig-based Flow networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2112.06590, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP BibTeX RDF |
|
25 | A. V. Sedelnikov, E. S. Khnyryova |
Estimate of parameters changing of the Lymantria dispar artificial population in different environmental conditions using the quasispecies model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Int. J. Model. Simul. Sci. Comput. ![In: Int. J. Model. Simul. Sci. Comput. 11(5), pp. 2050053:1-2050053:11, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
25 | Marco Cacciabue, Anabella Currá, Elisa Carrillo, Guido König, María Inés Gismondi |
A beginner's guide for FMDV quasispecies analysis: sub-consensus variant detection and haplotype reconstruction using next-generation sequencing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 21(5), pp. 1766-1775, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
25 | Ziqi Ke, Haris Vikalo |
A Graph Auto-Encoder for Haplotype Assembly and Viral Quasispecies Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
AAAI ![In: The Thirty-Fourth AAAI Conference on Artificial Intelligence, AAAI 2020, The Thirty-Second Innovative Applications of Artificial Intelligence Conference, IAAI 2020, The Tenth AAAI Symposium on Educational Advances in Artificial Intelligence, EAAI 2020, New York, NY, USA, February 7-12, 2020., pp. 719-726, 2020, AAAI Press, 978-1-57735-823-7. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
25 | Ziqi Ke, Haris Vikalo |
A Convolutional Auto-Encoder for Haplotype Assembly and Viral Quasispecies Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
NeurIPS ![In: Advances in Neural Information Processing Systems 33: Annual Conference on Neural Information Processing Systems 2020, NeurIPS 2020, December 6-12, 2020, virtual., 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP BibTeX RDF |
|
25 | Jasmijn A. Baaijens, Bastiaan Van der Roest, Johannes Köster, Leen Stougie, Alexander Schönhuth |
Full-length de novo viral quasispecies assembly through variation graph construction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 35(24), pp. 5086-5094, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
25 | Ziqi Ke, Haris Vikalo |
A Graph Auto-Encoder for Haplotype Assembly and Viral Quasispecies Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1911.05316, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP BibTeX RDF |
|
25 | Dan Huang, Jingli Wu |
基于彩色编码技术的准种重建算法 (Quasispecies Reconstruction Algorithm Based on Color Coding Technology). ![Search on Bibsonomy](Pics/bibsonomy.png) |
计算机科学 ![In: 计算机科学 46(2), pp. 301-305, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
25 | Soyeon Ahn, Ziqi Ke, Haris Vikalo |
Viral quasispecies reconstruction via tensor factorization with successive read removal. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(13), pp. i23-i31, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
25 | Pavel Skums, Alex Zelikovsky, Rahul Singh, Walker Gussler, Zoya Dimitrova, Sergey Knyazev, Igor Mandric, Sumathi Ramachandran, David S. Campo, Deeptanshu Jha, Leonid Bunimovich, Elizabeth Costenbader, Connie Sexton, Siobhán O'Connor 0002, Guo-liang Xia, Yury Khudyakov |
QUENTIN: reconstruction of disease transmissions from viral quasispecies genomic data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(1), pp. 163-170, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
25 | Jiao Chen, Yingchao Zhao 0001, Yanni Sun |
De novo haplotype reconstruction in viral quasispecies using paired-end read guided path finding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(17), pp. 2927-2935, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
25 | Soyeon Ahn, Ziqi Ke, Haris Vikalo |
Viral quasispecies reconstruction via tensor factorization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Allerton ![In: 55th Annual Allerton Conference on Communication, Control, and Computing, Allerton 2017, Monticello, IL, USA, October 3-6, 2017, pp. 1236-1239, 2017, IEEE, 978-1-5386-3266-6. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
25 | Alexander Artyomenko, Pelin B. Icer, Pavel Skums, Sumathi Ramachandran, Yury Khudyakov, Alex Zelikovsky |
Agent-Based in Silico Evolution of HCV Quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications - 13th International Symposium, ISBRA 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings, pp. 420-424, 2017, Springer, 978-3-319-59574-0. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
25 | Xiaoli Jiao, Hiromi Imamichi, Tauseef Rehman, Rishub Nahar, Robin L. Dewar, H. Clifford Lane, Tomozumi Imamichi, Brad T. Sherman |
Self-Tuning Spectral Clustering for Full-length Viral Quasispecies Reconstruction with PacBio Long Reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BCB ![In: Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2017, Boston, MA, USA, August 20-23, 2017, pp. 587, 2017, ACM, 978-1-4503-4722-8. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
25 | Joseba Dalmau |
Distribution of the quasispecies for a Galton-Watson process on the sharp peak landscape. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Appl. Probab. ![In: J. Appl. Probab. 53(2), pp. 606-613, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
25 | Duleepa Jayasundara, Isaam Saeed, Bc Chang, Sen-Lin Tang, Saman K. Halgamuge |
Accurate reconstruction of viral quasispecies spectra through improved estimation of strain richness. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 16(S18), pp. S3, December 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
25 | Duleepa Jayasundara, Isaam Saeed, Suhinthan Maheswararajah, Bill C. Chang, Sen-Lin Tang, Saman K. Halgamuge |
ViQuaS: an improved reconstruction pipeline for viral quasispecies spectra generated by next-generation sequencing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(6), pp. 886-896, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
25 | Raphaël Cerf |
The quasispecies regime for the simple genetic algorithm with roulette-wheel selection. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1506.09081, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP BibTeX RDF |
|
25 | Alexander Artyomenko, Nicholas C. Wu, Serghei Mangul, Eleazar Eskin, Ren Sun, Alex Zelikovsky |
2SNV: Quasispecies reconstruction from PacBio reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCABS ![In: 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2015, Miami, FL, USA, October 15-17, 2015, pp. 1, 2015, IEEE Computer Society, 978-1-4673-9663-9. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
25 | Josep Gregori, Miquel Salicru, Esteban Domingo, Alex Sánchez-Pla, Juan I. Esteban, Francisco Rodríguez-Frías, Josep Quer |
Inference with viral quasispecies diversity indices: clonal and NGS approaches. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 30(8), pp. 1104-1111, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
25 | Raphaël Cerf |
The quasispecies regime for the simple genetic algorithm with ranking selection. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1403.5427, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP BibTeX RDF |
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25 | Armin Töpfer, Tobias Marschall, Rowena A. Bull, Fabio Luciani, Alexander Schönhuth, Niko Beerenwinkel |
Viral Quasispecies Assembly via Maximal Clique Enumeration. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 10(3), 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
25 | Armin Töpfer, Tobias Marschall, Rowena A. Bull, Fabio Luciani, Alexander Schönhuth, Niko Beerenwinkel |
Viral Quasispecies Assembly via Maximal Clique Enumeration. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology - 18th Annual International Conference, RECOMB 2014, Pittsburgh, PA, USA, April 2-5, 2014, Proceedings, pp. 309-310, 2014, Springer, 978-3-319-05268-7. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
25 | Diyue Bu, Haixu Tang |
Quasispecies reconstruction based on vertex coloring algorithms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: 2014 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2014, Belfast, United Kingdom, November 2-5, 2014, pp. 63-66, 2014, IEEE Computer Society, 978-1-4799-5669-2. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
25 | Serghei Mangul, Nicholas C. Wu, Nicholas Mancuso, Alex Zelikovsky, Ren Sun, Eleazar Eskin |
VGA: A method for viral quasispecies assembly from ultra-deep sequencing data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCABS ![In: IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014, Miami, FL, USA, June 2-4, 2014, pp. 1, 2014, IEEE Computer Society, 978-1-4799-5786-6. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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25 | Armin Töpfer, Niko Beerenwinkel |
Viral quasispecies assembly from paired-end reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCABS ![In: IEEE 4th International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2014, Miami, FL, USA, June 2-4, 2014, pp. 1, 2014, IEEE Computer Society, 978-1-4799-5786-6. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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25 | Bastian Beggel |
Determining and utilizing the quasispecies of the hepatitis B virus in clinical applications. ![Search on Bibsonomy](Pics/bibsonomy.png) |
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2014 |
RDF |
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25 | Wan-Ting Poh, Eryu Xia, Kwanrutai Chin-inmanu, Lai-Ping Wong, Anthony Youzhi Cheng, Prida Malasit, Prapat Suriyaphol, Yik-Ying Teo, Rick Twee-Hee Ong |
Viral quasispecies inference from 454 pyrosequencing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 14, pp. 355, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
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25 | Armin Töpfer, Osvaldo Zagordi, Sandhya Prabhakaran, Volker Roth 0001, Eran Halperin, Niko Beerenwinkel |
Probabilistic Inference of Viral Quasispecies Subject to Recombination. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 20(2), pp. 113-123, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
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25 | Alexander Artyomenko, Nicholas Mancuso, Alex Zelikovsky, Pavel Skums, Ion I. Mandoiu |
kGEM: An EM-based algorithm for local reconstruction of viral quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCABS ![In: IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2013, New Orleans, LA, USA, June 12-14, 2013, pp. 1, 2013, IEEE Computer Society. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
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25 | Pavel Skums, David S. Campo, Zoya Dimitrova, Leonid Bunimovich, Yuri Khudyakov |
Computational analysis and modelling of intra-host adaptation of hepatitis C virus: The role of immune cross-reactivity of HCV quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCABS ![In: IEEE 3rd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2013, New Orleans, LA, USA, June 12-14, 2013, pp. 1, 2013, IEEE Computer Society. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
|
25 | Mattia C. F. Prosperi, Marco Salemi |
QuRe: software for viral quasispecies reconstruction from next-generation sequencing data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 28(1), pp. 132-133, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
25 | Austin Huang, Rami Kantor, Allison DeLong, Leeann Schreier, Sorin Istrail |
QColors: An algorithm for conservative viral quasispecies reconstruction from short and non-contiguous next generation sequencing reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Silico Biol. ![In: Silico Biol. 11(5-6), pp. 193-201, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
25 | Nicholas Mancuso, Bassam Tork, Pavel Skums, Lilia Ganova-Raeva, Ion I. Mandoiu, Alex Zelikovsky |
Reconstructing viral quasispecies from NGS amplicon reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Silico Biol. ![In: Silico Biol. 11(5-6), pp. 237-249, 2012. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
25 | Osvaldo Zagordi, Armin Töpfer, Sandhya Prabhakaran, Volker Roth 0001, Eran Halperin, Niko Beerenwinkel |
Probabilistic Inference of Viral Quasispecies Subject to Recombination. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology - 16th Annual International Conference, RECOMB 2012, Barcelona, Spain, April 21-24, 2012. Proceedings, pp. 342-354, 2012, Springer, 978-3-642-29626-0. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
25 | Rachel J. O'Neill, Ion I. Mandoiu, Mazhar I. Khan, Craig Obergfell, Hongjun Wang, Andrew Bligh, Bassam Tork, Nicholas Mancuso, Alexander Zelikovsky |
Workshop: Bioinformatics methods for reconstruction of Infectious Bronchitis Virus quasispecies from next generation sequencing data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCABS ![In: IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2012, Las Vegas, NV, USA, February 23-25, 2012, pp. 1, 2012, IEEE Computer Society, 978-1-4673-1320-9. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
|
25 | Nicholas Mancuso, Bassam Tork, Pavel Skums, Lilia Ganova-Raeva, Ion I. Mandoiu, Alexander Zelikovsky |
Workshop: A maximum likelihood method for quasispecies spectrum assembly. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCABS ![In: IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2012, Las Vegas, NV, USA, February 23-25, 2012, pp. 1, 2012, IEEE Computer Society, 978-1-4673-1320-9. The full citation details ...](Pics/full.jpeg) |
2012 |
DBLP DOI BibTeX RDF |
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25 | Irina Astrovskaya, Bassam Tork, Serghei Mangul, Kelly Westbrooks, Ion I. Mandoiu, Peter Balfe, Alex Zelikovsky |
Inferring viral quasispecies spectra from 454 pyrosequencing reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 12(S-6), pp. S1, 2011. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
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25 | Mattia C. F. Prosperi, Luciano Prosperi, Alessandro Bruselles, Isabella Abbate, Gabriella Rozera, Donatella Vincenti, Maria Carmela Solmone, Maria Rosaria Capobianchi, Giovanni Ulivi |
Combinatorial analysis and algorithms for quasispecies reconstruction using next-generation sequencing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 12, pp. 5, 2011. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
|
25 | Austin Huang, Rami Kantor, Allison DeLong, Leeann Schreier, Sorin Istrail |
QColors: An algorithm for conservative viral quasispecies reconstruction from short and non-contiguous next generation sequencing reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM Workshops ![In: 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011, Atlanta, GA, USA, November 12-15, 2011, pp. 130-136, 2011, IEEE Computer Society, 978-1-4577-1612-6. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
|
25 | Pavel Skums, David S. Campo, Zoya Dimitrova, Gilberto Vaughan, Daryl T. Lau, Yuri Khudyakov |
Modelling differential interferon resistance of HCV quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM Workshops ![In: 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011, Atlanta, GA, USA, November 12-15, 2011, pp. 144-148, 2011, IEEE Computer Society, 978-1-4577-1612-6. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
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25 | Nicholas Mancuso, Bassam Tork, Pavel Skums, Ion I. Mandoiu, Alexander Zelikovsky |
Viral quasispecies reconstruction from amplicon 454 pyrosequencing reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM Workshops ![In: 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011, Atlanta, GA, USA, November 12-15, 2011, pp. 94-101, 2011, IEEE Computer Society, 978-1-4577-1612-6. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
|
25 | Paola Falugi, Laura Giarré |
Identification and validation of quasispecies models for biological systems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Syst. Control. Lett. ![In: Syst. Control. Lett. 58(7), pp. 529-539, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
25 | Emmanuel Tannenbaum, José Fernando Fontanari |
A quasispecies approach to the evolution of sexual replication in unicellular organisms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Theory Biosci. ![In: Theory Biosci. 127(1), pp. 53-65, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
25 | Masayuki Fujisawa, Yoshiteru Ishida |
A probabilistic simulator for population dynamics of quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Artif. Life Robotics ![In: Artif. Life Robotics 13(1), pp. 167-171, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
25 | Ha Youn Lee, Alan S. Perelson, Su-Chan Park, Thomas Leitner |
Dynamic Correlation between Intrahost HIV-1 Quasispecies Evolution and Disease Progression. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 4(12), 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
25 | Antonio Miguel Mora, Juan Julián Merelo Guervós, Carlos Briones, Federico Morán, Juan Luis Jiménez Laredo |
Clustering and Visualizing HIV Quasispecies Using Kohonen's Self-Organizing Maps. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IWANN ![In: Computational and Ambient Intelligence, 9th International Work-Conference on Artificial Neural Networks, IWANN 2007, San Sebastián, Spain, June 20-22, 2007, Proceedings, pp. 940-947, 2007, Springer, 978-3-540-73006-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
25 | James J. Bull, Lauren Ancel Meyers, Michael Lachmann |
Quasispecies Made Simple. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 1(6), 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
25 | Patricia Buendia, Giri Narasimhan |
MinPD: Distance-Based Phylogenetic Analysis and Recombination Detection of Serially-Sampled HIV Quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: 3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, pp. 110-119, 2004, IEEE Computer Society, 0-7695-2194-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
25 | Jeffrey J. Stewart, Perry Watts, Samuel Litwin |
An algorithm for mapping positively selected members of quasispecies-type viruses. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 2, pp. 1, 2001. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
25 | Prasith Baccam, Robert J. Thompson, Olivier Fedrigo, Susan Carpenter, James L. Cornette |
PAQ: Partition Analysis of Quasispecies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 17(1), pp. 16-22, 2001. The full citation details ...](Pics/full.jpeg) |
2001 |
DBLP DOI BibTeX RDF |
|
24 | Yoshiteru Ishida |
A Note on Symmetries on Equations of Population Dynamics and Stability Conditions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
KES (3) ![In: Knowledge-Based Intelligent Information and Engineering Systems, 11th International Conference, KES 2007, XVII Italian Workshop on Neural Networks, Vietri sul Mare, Italy, September 12-14, 2007, Proceedings, Part III, pp. 796-803, 2007, Springer, 978-3-540-74828-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
additive symmetry, stability, identity, diagram, degeneracy |
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