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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 135 occurrences of 94 keywords
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Results
Found 903 publication records. Showing 903 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
113 | John K. Goutsias |
A Hidden Markov Model for Transcriptional Regulation in Single Cells. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 3(1), pp. 57-71, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
stochastic biochemical systems, stochastic dynamical systems, transcriptional regulatory systems, Hidden Markov models, Monte Carlo simulation, transcriptional regulation |
90 | Ting Gong, Jianhua Xuan, Li Chen 0018, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke |
Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Fourth International Symposium, ISBRA 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings, pp. 244-255, 2008, Springer, 978-3-540-79449-3. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Motif analysis, transcriptional modules, estrogen receptor binding, gene regulatory networks, sparse component analysis |
90 | Peter M. Haverty, Zhiping Weng, Ulla Hansen |
Transcriptional Regulatory Networks Activated by PI3K and ERK Transduced Growth Signals in Human Glioblastoma Cells. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Sci. Technol. ![In: J. Comput. Sci. Technol. 20(4), pp. 439-445, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
PI3K, ERK, PDGF, cis-element, transcriptional, regulatory network |
87 | Khwunta Kirimasthong, Aompilai Manorat, Jeerayut Chaijaruwanich, Sukon Prasitwattanaseree, Chinae Thammarongtham |
Inference of Gene Regulatory Network by Bayesian Network Using Metropolis-Hastings Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ADMA ![In: Advanced Data Mining and Applications, Third International Conference, ADMA 2007, Harbin, China, August 6-8, 2007, Proceedings, pp. 276-286, 2007, Springer, 978-3-540-73870-1. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Transcriptional expression analysis, Bayesian network, Gene regulatory network, Metropolis-Hastings algorithm |
67 | Hsien-Da Huang, Jorng-Tzong Horng, Yi-Ming Sun, Ann-Ping Tsou, Shir-Ly Huang |
Identifying Transcriptional Regulatory Sites in the Human Genome Using an Integrated Computation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISPAN ![In: 7th International Symposium on Parallel Architectures, Algorithms, and Networks (I-SPAN 2004), 10-12 May 2004, Hong Kong, SAR, China, pp. 637-642, 2004, IEEE Computer Society, 0-7695-2135-5. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
62 | Tie Wang, Jeffrey W. Touchman, Weiyi Zhang 0001, Edward B. Suh, Guoliang Xue |
A Parallel Algorithm for Extracting Transcription Regulatory Network Motifs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: Fifth IEEE International Symposium on Bioinformatic and Bioengineering (BIBE 2005), 19-21 October 2005, Minneapolis, MN, USA, pp. 193-200, 2005, IEEE Computer Society, 0-7695-2476-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
transcriptional regulatory network, systems biology, Network motifs |
54 | Mattia Zampieri, Ingrid Cifola, Dario Basso, Roberta Spinelli, Luca Beltrame, Clelia Peano, Cristina Battaglia, Silvio Bicciato |
Locally Adaptive Statistical Procedures for the Integrative Analysis on Genomic and Transcriptional Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WILF ![In: Applications of Fuzzy Sets Theory, 7th International Workshop on Fuzzy Logic and Applications, WILF 2007, Camogli, Italy, July 7-10, 2007, Proceedings, pp. 682-689, 2007, Springer, 978-3-540-73399-7. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
integrative, microarray, gene expression, genomics, genotyping |
54 | Kai Wang 0045, Ilya Nemenman, Nilanjana Banerjee, Adam A. Margolin, Andrea Califano |
Genome-Wide Discovery of Modulators of Transcriptional Interactions in Human B Lymphocytes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 10th Annual International Conference, RECOMB 2006, Venice, Italy, April 2-5, 2006, Proceedings, pp. 348-362, 2006, Springer, 3-540-33295-2. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
54 | Anshul Kundaje, Manuel Middendorf, Feng Gao, Chris Wiggins 0001, Christina S. Leslie |
Combining Sequence and Time Series Expression Data to Learn Transcriptional Modules. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 2(3), pp. 194-202, 2005. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
clustering, heterogeneous data, Gene regulation |
54 | Yi-Ming Sun, Hsien-Da Huang, Jorng-Tzong Horng, Shir-Ly Huang, Ann-Ping Tsou |
RgS-Miner: A Biological Data Warehousing, Analyzing and Mining System for Identifying Transcriptional Regulatory Sites in Human Genome. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DEXA ![In: Database and Expert Systems Applications, 15th International Conference, DEXA 2004 Zaragoza, Spain, August 30-September 3, 2004, Proceedings, pp. 751-760, 2004, Springer, 3-540-22936-1. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
52 | Frank Emmert-Streib, Matthias Dehmer |
Organizational Structure of the Transcriptional Regulatory Network of Yeast: Periodic Genes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Complex (1) ![In: Complex Sciences, First International Conference, Complex 2009, Shanghai, China, February 23-25, 2009. Revised Papers, Part 1, pp. 140-148, 2009, Springer, 978-3-642-02465-8. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
transcriptional regulatory network, periodic genes, graph theory, randomization, causality |
51 | Abhyudai Singh, João Pedro Hespanha |
Noise suppression in auto-regulatory gene networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CDC ![In: Proceedings of the 47th IEEE Conference on Decision and Control, CDC 2008, December 9-11, 2008, Cancún, Mexico, pp. 787-792, 2008, IEEE, 978-1-4244-3123-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
41 | Domitilla Del Vecchio, Shridhar Jayanthi |
Retroactivity attenuation in transcriptional networks: Design and analysis of an insulation device. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CDC ![In: Proceedings of the 47th IEEE Conference on Decision and Control, CDC 2008, December 9-11, 2008, Cancún, Mexico, pp. 774-780, 2008, IEEE, 978-1-4244-3123-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
41 | Jennifer Hallinan, Anil Wipat |
Network motifs in context: An exploration of the evolution of oscillatory dynamics in transcriptional networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBCB ![In: Proceedings of the 2008 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2008, Sun Valley Resort, Sun Valley, Idaho, USA, September 15-17, 2008, pp. 83-89, 2008, IEEE, 978-1-4244-1778-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
41 | M. Madan Babu |
Evolutionary and Temporal Dynamics of Transcriptional Regulatory Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIOWIRE ![In: Bio-Inspired Computing and Communication, First Workshop on Bio-Inspired Design of Networks, BIOWIRE 2007, Cambridge, UK, April 2-5, 2007, Revised Selected Papers, pp. 174-183, 2007, Springer, 978-3-540-92190-5. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
transcription and gene regulation, network, evolution, dynamics |
41 | Ann-Ping Tsou, Yi-Ming Sun, Chia-Lin Liu, Hsien-Da Huang, Jorng-Tzong Horng, Meng-Feng Tsai, Baw-Jhiune Liu |
Biological Data Warehousing System for Identifying Transcriptional Regulatory Sites From Gene Expressions of Microarray Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Inf. Technol. Biomed. ![In: IEEE Trans. Inf. Technol. Biomed. 10(3), pp. 550-558, 2006. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
41 | Oriane Matte-Tailliez, Joan Hérisson, Nicolas Férey, Olivier Magneau, Pierre-Emmanuel Gros, François Képès, Rachid Gherbi |
Yeast Naked DNA Spatial Organization Predisposes to Transcriptional Regulation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCSA (1) ![In: Computational Science and Its Applications - ICCSA 2006, International Conference, Glasgow, UK, May 8-11, 2006, Proceedings, Part I, pp. 222-231, 2006, Springer, 3-540-34070-X. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
41 | Je-Gun Joung, Sok June Oh, Byoung-Tak Zhang |
Searching Transcriptional Modules Using Evolutionary Algorithms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PPSN ![In: Parallel Problem Solving from Nature - PPSN VIII, 8th International Conference, Birmingham, UK, September 18-22, 2004, Proceedings, pp. 532-540, 2004, Springer, 3-540-23092-0. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
38 | Weixiong Zhang |
Data Mining Methods for Modeling Gene Expression Regulation and Their Applications. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICDM ![In: Proceedings of the 6th IEEE International Conference on Data Mining (ICDM 2006), 18-22 December 2006, Hong Kong, China, pp. 7, 2006, IEEE Computer Society, 0-7695-2701-9. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
38 | Xuefeng Zhou, Jianhua Ruan, Guandong Wang, Weixiong Zhang |
Computational Characterization and Identification of Core Promoters of MicroRNA Genes in C. elegans , H. sapiens and A. thaliana. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Systems Biology and Regulatory Genomics ![In: Systems Biology and Regulatory Genomics, Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA; December 2-4, 2005, Revised Selected Papers, pp. 235-248, 2005, Springer, 978-3-540-48293-2. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
36 | Chikoo Oosawa, Michael A. Savageau, Abdul Salam Jarrah, Reinhard C. Laubenbacher, Eduardo D. Sontag |
Stabilizing and Destabilizing Effects of Embedding 3-Node Subgraphs on the State Space of Boolean Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACRI ![In: Cellular Automata, 8th International Conference on Cellular Aotomata for Reseach and Industry, ACRI 2008, Yokohama, Japan, September 23-26, 2008. Proceedings, pp. 100-107, 2008, Springer, 978-3-540-79991-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
transcriptional regulatory networks, Thomas’s conjecture, entropy, feedback, mutual information, subgraph, feedforward, Boolean networks |
36 | Nilanjana Banerjee, Andrea Califano |
Transcription Factor Centric Discovery of Regulatory Elements in Mammalian Genomes Using Alignment-Independent Conservation Maps. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comparative Genomics ![In: Comparative Genomics, RECOMB 2006 International Workshop, RCG 2006, Montreal, Canada, September 24-26, 2006, Proceedings, pp. 200-214, 2006, Springer, 3-540-44529-3. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
DNA binding site analysis, reverse engineering, systems biology, pattern discovery, comparative genomics, transcriptional regulation |
36 | Eran Segal, Roded Sharan |
A discriminative model for identifying spatial cis-regulatory modules. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 141-149, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
cis-regulatory module, probabilistic model, transcriptional regulation |
31 | Mattia Furlan, Stefano de Pretis, Mattia Pelizzola |
Dynamics of transcriptional and post-transcriptional regulation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 22(4), 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
31 | Kohei Negishi, Kengo Morohashi |
Comprehensive Transcriptional Analysis Reveals Gene-specific Transcriptional Variations in a Seed Plant, Arabidopsis thaliana. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICAART (1) ![In: Proceedings of the 13th International Conference on Agents and Artificial Intelligence, ICAART 2021, Volume 1, Online Streaming, February 4-6, 2021., pp. 585-590, 2021, SCITEPRESS, 978-989-758-484-8. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
31 | Iain M. Dykes, Costanza Emanueli |
Transcriptional and Post-transcriptional Gene Regulation by Long Non-coding RNA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Genom. Proteom. Bioinform. ![In: Genom. Proteom. Bioinform. 15(3), pp. 177-186, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
31 | Emanuel J. V. Gonçalves, Zrinka Raguz Nakic, Mattia Zampieri, Omar Wagih, David Ochoa, Uwe Sauer, Pedro Beltrão, Julio Saez-Rodriguez |
Systematic Analysis of Transcriptional and Post-transcriptional Regulation of Metabolism in Yeast. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 13(1), 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
31 | Chen Zhao, Jeffrey S. Isenberg, Aleksander S. Popel |
Transcriptional and Post-Transcriptional Regulation of Thrombospondin-1 Expression: A Computational Model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 13(1), 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
31 | Zhi-Ping Liu, Canglin Wu, Hongyu Miao 0001, Hulin Wu |
RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Database J. Biol. Databases Curation ![In: Database J. Biol. Databases Curation 2015, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
31 | Zhi-Ping Liu, Hulin Wu, Jian Zhu, Hongyu Miao 0001 |
Systematic identification of transcriptional and post-transcriptional regulations in human respiratory epithelial cells during influenza A virus infection. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 15, pp. 336, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
31 | Anagha Joshi |
Mammalian transcriptional hotspots are enriched for tissue specific enhancers near cell type specific highly expressed genes and are predicted to act as transcriptional activator hubs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 15, pp. 6591, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
31 | Raffaele Fronza, Michele Tramonti, William R. Atchley, Christine Nardini |
Joint Analysis of Transcriptional and post- Transcriptional Data: Searching Emergent Properties in Brain Tumor Samples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 12, pp. 86, 2011. The full citation details ...](Pics/full.jpeg) |
2011 |
DBLP DOI BibTeX RDF |
|
31 | Marta Biasiolo, Mattia Forcato, Lino Possamai, Francesco Ferrari, Luca Agnelli, Marta Lionetti, Katia Todoerti, Antonino Neri, Massimo Marchiori, Stefania Bortoluzzi, Silvio Bicciato |
Critical Analysis of Transcriptional and Post-Transcriptional Regulatory Networks in Multiple Myeloma. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Pacific Symposium on Biocomputing ![In: Biocomputing 2010: Proceedings of the Pacific Symposium, Kamuela, Hawaii, USA, 4-8 January 2010, pp. 397-408, 2010, World Scientific Publishing, 978-981-4295-29-1. The full citation details ...](Pics/full.jpeg) |
2010 |
DBLP BibTeX RDF |
|
31 | John E. Reid, Sascha Ott, Lorenz Wernisch |
Transcriptional programs: Modelling higher order structure in transcriptional control. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 10, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
31 | Lorenz Bülow, Stefan Engelmann, Martin Schindler, Reinhard Hehl |
AthaMap, integrating transcriptional and post-transcriptional data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 37(Database-Issue), pp. 983-986, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
31 | Gaëlle Lelandais, Yann Saint-Georges, Colette Geneix, Liza Al-Shikhley, Geneviève Dujardin, Claude Jacq |
Spatio-Temporal Dynamics of Yeast Mitochondrial Biogenesis: Transcriptional and Post-Transcriptional mRNA Oscillatory Modules. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 5(6), 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
31 | Tommy Kaplan |
From DNA sequence to chromatin dynamics : computational analysis of transcriptional regulation (Computational analysis of transcriptional regulation.; ניתוח חישובי של בקרת שעתוק.; מרצף הדנ"א ועד דינמיקה של כרומטין.). ![Search on Bibsonomy](Pics/bibsonomy.png) |
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2008 |
RDF |
|
28 | |
Transcriptional Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Encyclopedia of Database Systems ![In: Encyclopedia of Database Systems, pp. 3172, 2009, Springer US, 978-0-387-35544-3. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
28 | Cheng-Long Chuang, Chung-Ming Chen, Joe-Air Jiang |
Infer Genetic/Transcriptional Regulatory Networks by Recognition of Microarray Gene Expression Patterns Using Adaptive Neuro-Fuzzy Inference Systems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Fuzzy Systems in Bioinformatics and Computational Biology ![In: Fuzzy Systems in Bioinformatics and Computational Biology, pp. 217-233, 2009, Springer, 978-3-540-89967-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
28 | Xiuwei Zhang, Bernard M. E. Moret |
Improving Inference of Transcriptional Regulatory Networks Based on Network Evolutionary Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 9th International Workshop, WABI 2009, Philadelphia, PA, USA, September 12-13, 2009. Proceedings, pp. 415-428, 2009, Springer, 978-3-642-04240-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
28 | Peng Wei 0005, Wei Pan |
Incorporating Gene Functions into Regression Analysis of DNA-Protein Binding Data and Gene Expression Data to Construct Transcriptional Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 5(3), pp. 401-415, 2008. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
Shrinkage estimator, Stratified analysis, Microarray, Transcription factor, LASSO |
28 | Denis Smirnov, Vivian G. Cheung |
Disruption of a Transcriptional Regulatory Pathway Contributes to Phenotypes in Carriers of Ataxia Telangiectasia. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 12th Annual International Conference, RECOMB 2008, Singapore, March 30 - April 2, 2008. Proceedings, pp. 410, 2008, Springer, 978-3-540-78838-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
28 | Yun Xiong, Guangyong Zheng, Qing Yang, Yangyong Zhu |
An Agent-Based Approach to Mine Transcriptional Regulatory Elements. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Web Intelligence/IAT Workshops ![In: Proceedings of the 2008 IEEE/WIC/ACM International Conference on Web Intelligence and International Conference on Intelligent Agent Technology - Workshops, 9-12 December 2008, Sydney, NSW, Australia, pp. 567-570, 2008, IEEE Computer Society. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
28 | Xiuwei Zhang, Maryam Zaheri, Bernard M. E. Moret |
Using Phylogenetic Relationships to Improve the Inference of Transcriptional Regulatory Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMEI (1) ![In: Proceedings of the 2008 International Conference on BioMedical Engineering and Informatics, BMEI 2008, May 28-30, 2008, Sanya, Hainan, China - Volume 1, pp. 186-193, 2008, IEEE Computer Society, 978-0-7695-3118-2. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
phylogenetic relationships, maximum likelihood, dynamic Bayesian networks, regulatory networks |
28 | Xiuwei Zhang, Bernard M. E. Moret |
Boosting the Performance of Inference Algorithms for Transcriptional Regulatory Networks Using a Phylogenetic Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics, 8th International Workshop, WABI 2008, Karlsruhe, Germany, September 15-19, 2008. Proceedings, pp. 245-258, 2008, Springer, 978-3-540-87360-0. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
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28 | Jeerayut Chaijaruwanich, Jamlong Khamphachua, Sukon Prasitwattanaseree, Saradee Warit, Prasit Palittapongarnpim |
Application of Factor Analysis on Mycobacterium Tuberculosis Transcriptional Responses for Drug Clustering, Drug Target, and Pathway Detections. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ADMA ![In: Advanced Data Mining and Applications, Second International Conference, ADMA 2006, Xi'an, China, August 14-16, 2006, Proceedings, pp. 835-844, 2006, Springer, 3-540-37025-0. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
28 | Sara Hooshangi, Stephan Thiberge, Ron Weiss |
Noise Propagation in Transcriptional Cascades. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB Workshops ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference Workshops & Poster Abstracts, CSB 2005 Workshops, Stanford, CA, USA, August 8-11, 2005, pp. 255, 2005, IEEE Computer Society, 0-7695-2442-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
26 | Oscar Harari, Luis Javier Herrera, Igor Zwir |
A Hybrid Promoter Analysis Methodology for Prokaryotic Genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Fuzzy Systems in Bioinformatics and Computational Biology ![In: Fuzzy Systems in Bioinformatics and Computational Biology, pp. 45-65, 2009, Springer, 978-3-540-89967-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
26 | Tali Raveh-Sadka, Michal Levo, Eran Segal |
Incorporating Nucleosomes into Thermodynamic Models of Transcription Regulation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 13th Annual International Conference, RECOMB 2009, Tucson, AZ, USA, May 18-21, 2009. Proceedings, pp. 217, 2009, Springer, 978-3-642-02007-0. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
|
26 | Hojung Nam, Ki Young Lee, Doheon Lee |
Identification of temporal association rules from time-series microarray data set: temporal association rules. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DTMBIO ![In: Proceeding of the 2nd International Workshop on Data and Text Mining in Bioinformatics, DTMBIO 2008, Napa Valley, California, USA, October 30, 2008, pp. 21-28, 2008, ACM, 978-1-60558-251-1. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
data mining, association rule mining, gene expression |
26 | Yanxin Shi, Itamar Simon, Tom M. Mitchell, Ziv Bar-Joseph |
A Combined Expression-Interaction Model for Inferring the Temporal Activity of Transcription Factors. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology, 12th Annual International Conference, RECOMB 2008, Singapore, March 30 - April 2, 2008. Proceedings, pp. 82-97, 2008, Springer, 978-3-540-78838-6. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
26 | Carito Guziolowski, Jeremy Gruel, Ovidiu Radulescu, Anne Siegel |
Curating a Large-Scale Regulatory Network by Evaluating Its Consistency with Expression Datasets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBB ![In: Computational Intelligence Methods for Bioinformatics and Biostatistics, 5th International Meeting, CIBB 2008, Vietri sul Mare, Italy, October 3-4, 2008, Revised Selected Papers, pp. 144-155, 2008, Springer, 978-3-642-02503-7. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
|
26 | Adam T. Szafran, Marco Marcelli, Michael A. Mancini |
High throughput multiplex image analyses for androgen receptor function. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBI ![In: Proceedings of the 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, May 14-17, 2008, pp. 320-323, 2008, IEEE, 978-1-4244-2003-2. The full citation details ...](Pics/full.jpeg) |
2008 |
DBLP DOI BibTeX RDF |
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26 | Ozy Sjahputera, James M. Keller, J. Wade Davis, Kristen H. Taylor, Farahnaz Rahmatpanah, Huidong Shi, Derek Anderson, Samuel Blisard, Robert H. Luke III, Mihail Popescu, Gerald C. Arthur, Charles William Caldwell |
Relational Analysis of CpG Islands Methylation and Gene Expression in Human Lymphomas Using Possibilistic C-Means Clustering and Modified Cluster Fuzzy Density. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(2), pp. 176-189, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
cluster density, clustering, fuzzy sets, microarray, expression, Methylation |
26 | Oscar Harari, Cristina Rubio-Escudero, Patricio Traverso, Marcelo Santos, Igor Zwir |
Learning Robust Dynamic Networks in Prokaryotes by Gene Expression Networks Iterative Explorer (GENIE). ![Search on Bibsonomy](Pics/bibsonomy.png) |
NICSO ![In: Nature Inspired Cooperative Strategies for Optimization (NICSO 2007), pp. 299-311, 2007, Springer, 978-3-540-78986-4. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
26 | Oscar Harari, Igor Zwir |
Dissecting network motifs by identifying promoter features that govern differential gene expression. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SCSC ![In: Proceedings of the 2007 Summer Computer Simulation Conference, SCSC 2007, San Diego, California, USA, July 16-19, 2007, pp. 817-826, 2007, Simulation Councils, Inc., 1-56555-316-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP BibTeX RDF |
|
26 | Rocío Romero-Záliz, Oscar Harari, Cristina Rubio-Escudero, Igor Zwir |
Identifying the Promoter Features Governing Differential Kinetics of Co-regulated Genes Using Fuzzy Expressions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
FUZZ-IEEE ![In: FUZZ-IEEE 2007, IEEE International Conference on Fuzzy Systems, Imperial College, London, UK, 23-26 July, 2007, Proceedings, pp. 1-7, 2007, IEEE. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
26 | Huimin Geng, Javeed Iqbal, Xutao Deng, Wing C. Chan, Hesham H. Ali |
Virtual CGH: Prediction of Novel Regions of Chromosomal Alterations in Tumor from Gene Expression Profiling. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HICSS ![In: 40th Hawaii International International Conference on Systems Science (HICSS-40 2007), CD-ROM / Abstracts Proceedings, 3-6 January 2007, Waikoloa, Big Island, HI, USA, pp. 129, 2007, IEEE Computer Society, 0-7695-2755-8. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
|
26 | Pierre-Yves Bourguignon, Vincent Danos, François Képès, Serge Smidtas, Vincent Schächter |
Property-Driven Statistics of Biological Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Trans. Comp. Sys. Biology ![In: Transactions on Computational Systems Biology VI, pp. 1-15, 2006, Springer, 3-540-45779-8. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
26 | Mengxia Zhu, Qishi Wu, Yunfeng Yang, Jizhong Zhou |
A New Approach to Identify Functional Modules Using Random Matrix Theory. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBCB ![In: Proceedings of the 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB 2006, Renaissance Hotel Downtown, Toronto, Ontario, Canada, September 28-29, 2006, pp. 1-7, 2006, IEEE, 1-4244-0623-4. The full citation details ...](Pics/full.jpeg) |
2006 |
DBLP DOI BibTeX RDF |
|
26 | Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli |
An Interaction-Dependent Model for Transcription Factor Binding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Systems Biology and Regulatory Genomics ![In: Systems Biology and Regulatory Genomics, Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA; December 2-4, 2005, Revised Selected Papers, pp. 225-234, 2005, Springer, 978-3-540-48293-2. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
26 | Jun Hu, Jing Zhang |
The Cluster Distribution of Regulatory Motifs of Transcription in Yeast Introns. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIC (2) ![In: Advances in Intelligent Computing, International Conference on Intelligent Computing, ICIC 2005, Hefei, China, August 23-26, 2005, Proceedings, Part II, pp. 51-60, 2005, Springer, 3-540-28227-0. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
26 | Yuji Kawada, Yasubumi Sakakibara |
Discriminative Discovery of Transcription Factor Binding Sites from Location Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CSB ![In: Fourth International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2005, Stanford, CA, USA, August 8-11, 2005, pp. 86-89, 2005, IEEE Computer Society, 0-7695-2344-7. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
26 | Dino Franklin, Ivan da Silva Sendin |
Analysis of Structure Prediction Tools in Mutated MeCP-2. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology, Brazilian Symposium on Bioinformatics, BSB 2005, Sao Leopoldo, Brazil, July 27-29, 2005, Proceedings, pp. 218-221, 2005, Springer, 3-540-28008-1. The full citation details ...](Pics/full.jpeg) |
2005 |
DBLP DOI BibTeX RDF |
|
26 | Alexis J. Battle, Eran Segal, Daphne Koller |
Probabilistic discovery of overlapping cellular processes and their regulation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Eighth Annual International Conference on Computational Molecular Biology, 2004, San Diego, California, USA, March 27-31, 2004, pp. 167-176, 2004, ACM, 1-58113-755-9. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
cellular processes, gene regulation, probabilistic relational models |
26 | Vladimir Filkov, Nameeta Y. Shah |
Inferring Cis-region Hierarchies from Patterns in Time-Course Gene Expression Data ![Search on Bibsonomy](Pics/bibsonomy.png) |
Regulatory Genomics ![In: Regulatory Genomics, RECOMB 2004 International Workshop, RRG 2004, San Diego, CA, USA, March 26-27, 2004, Revised Selected Papers, pp. 88-97, 2004, Springer, 3-540-24456-5. The full citation details ...](Pics/full.jpeg) |
2004 |
DBLP DOI BibTeX RDF |
|
26 | Chen-Hsiang Yeang, Tommi S. Jaakkola |
Physical network models and multi-source data integration. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sventh Annual International Conference on Computational Biology, RECOMB 2003, Berlin, Germany, April 10-13, 2003, pp. 312-321, 2003, ACM, 1-58113-635-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
data fusion, physical models, regulatory networks |
26 | Mathieu Blanchette |
A comparative analysis method for detecting binding sites in coding regions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Proceedings of the Sventh Annual International Conference on Computational Biology, RECOMB 2003, Berlin, Germany, April 10-13, 2003, pp. 57-66, 2003, ACM, 1-58113-635-8. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
26 | Patrick C. H. Ma, Keith C. C. Chan |
Discovering Clusters in Gene Expression Data Using Evolutionary Approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICTAI ![In: 15th IEEE International Conference on Tools with Artificial Intelligence (ICTAI 2003), 3-5 November 2003, Sacramento, California, USA, pp. 459-466, 2003, IEEE Computer Society, 0-7695-2038-3. The full citation details ...](Pics/full.jpeg) |
2003 |
DBLP DOI BibTeX RDF |
|
23 | Chengpeng Bi |
A Monte Carlo EM Algorithm for De Novo Motif Discovery in Biomolecular Sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 6(3), pp. 370-386, 2009. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Monte Carlo EM, multiple sequence alignment, motif discovery, transcriptional regulation, Expectation maximization (EM) |
23 | Qi Wang, Shiwei Yan, Shengjun Liu, Xian Li |
Frequency Domain Analysis of a Stochastic Biological Network Motif with Delay. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Complex (2) ![In: Complex Sciences, First International Conference, Complex 2009, Shanghai, China, February 23-25, 2009. Revised Papers, Part 2, pp. 1731-1742, 2009, Springer, 978-3-642-02468-9. The full citation details ...](Pics/full.jpeg) |
2009 |
DBLP DOI BibTeX RDF |
Intrinsic and extrinsic sources, transcriptional and translational time delay, frequency domain analysis, negative feedback |
23 | Nasimul Noman, Hitoshi Iba |
Inferring Gene Regulatory Networks using Differential Evolution with Local Search Heuristics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 4(4), pp. 634-647, 2007. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Medicine and science, Gene regulatory system, Global optimization, Memetic algorithm, Inverse problems, Biology and genetics, Microarray data, Transcriptional regulation |
23 | Ranajit Das, Sushmita Mitra, Haider Banka, Subhasis Mukhopadhyay |
Evolutionary Biclustering with Correlation for Gene Interaction Networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PReMI ![In: Pattern Recognition and Machine Intelligence, Second International Conference, PReMI 2007, Kolkata, India, December 18-22, 2007, Proceedings, pp. 416-424, 2007, Springer, 978-3-540-77045-9. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
transcriptional regulatory network extraction, gene interaction network, Bioinformatics, gene expression profile |
23 | Chengpeng Bi |
Multiple Sequence Local Alignment Using Monte Carlo EM Algorithm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings, pp. 465-476, 2007, Springer, 978-3-540-72030-0. The full citation details ...](Pics/full.jpeg) |
2007 |
DBLP DOI BibTeX RDF |
Monte Carlo EM, Multiple Sequence Local Alignment, Motif Discovery, Transcriptional Regulation, Expectation Maximization (EM) |
15 | Guanqun Yao, Jing Luo, Ting Zou, Jing Li, Shuang Hu, Langxiong Yang, Xinrong Li, Yu Tian, Yuqi Zhang, Kun Feng, Yong Xu, Pozi Liu |
Transcriptional patterns of the cortical Morphometric Inverse Divergence in first-episode, treatment-naïve early-onset schizophrenia. ![Search on Bibsonomy](Pics/bibsonomy.png) |
NeuroImage ![In: NeuroImage 285, pp. 120493, January 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
15 | Huanhuan Liu, Qinwei Chen, Jintao Guo, Ying Zhou, Zhiyu You, Jun Ren, Yuanyuan Zeng, Jing Yang, Jialiang Huang, Qiyuan Li |
Epigenome-augmented eQTL-hotspots reveal genome-wide transcriptional programs in 36 human tissues. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 25(3), 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
15 | Thomas P. Wytock, Adilson E. Motter |
Cell reprogramming design by transfer learning of functional transcriptional networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2403.04837, 2024. The full citation details ...](Pics/full.jpeg) |
2024 |
DBLP DOI BibTeX RDF |
|
15 | Xing Guo, Jie Li, Qian Su, Jiajun Song, Cai Cheng, Xu Chu, Rui Zhao 0027 |
Transcriptional correlates of frequency-dependent brain functional activity associated with symptom severity in degenerative cervical myelopathy. ![Search on Bibsonomy](Pics/bibsonomy.png) |
NeuroImage ![In: NeuroImage 284, pp. 120451, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Yishu Wang 0003, Juan Qi, Dongmei Ai |
DPADM: a novel algorithm for detecting drug-pathway associations based on high-throughput transcriptional response to compounds. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 24(1), January 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Siqi Gao, Hanwen Zhu, Kangwen Cai, Leiqin Liu, Zhiqiang Zhang, Yi Ding, Yaochen Xu, Xiaoqi Zheng, Jiantao Shi |
TRAmHap: accurate prediction of transcriptional activity from DNA methylation haplotypes in bisulfite-sequencing data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 24(4), July 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Blanca Lacruz-Pleguezuelos, Oscar Piette, Marco Garranzo, David Pérez-Serrano, Jelena Milesevic, Isabel Espinosa-Salinas, Ana Ramírez de Molina, Teresa Laguna, Enrique Carrillo-de Santa Pau |
FooDrugs: a comprehensive food-drug interactions database with text documents and transcriptional data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Database J. Biol. Databases Curation ![In: Database J. Biol. Databases Curation 2023, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Yuxin Zhang, Jie Jiang, Jiongming Ma, Zhen Wei, Yue Wang 0060, Bowen Song, Jia Meng, Guifang Jia, João Pedro de Magalhães, Daniel J. Rigden, Daiyun Hang, Kunqi Chen |
DirectRMDB: a database of post-transcriptional RNA modifications unveiled from direct RNA sequencing technology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 51(D1), pp. 106-116, January 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Menglin Zheng, Satoshi Okawa, Miren Bravo, Fei Chen, María L. Martínez-Chantar, Antonio del Sol |
ChemPert: mapping between chemical perturbation and transcriptional response for non-cancer cells. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 51(D1), pp. 877-889, January 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Junhong Huang, Wu-Jian Zheng, Ping Zhang, Qiao Lin, Zhi-Rong Chen, Jia-Jia Xuan, Chang Liu, Di Wu, Qiaojuan Huang, Ling-Ling Zheng, Shurong Liu, Keren Zhou 0002, Liang-Hu Qu, Bin Li 0060, Jian-Hua Yang |
ChIPBase v3.0: the encyclopedia of transcriptional regulations of non-coding RNAs and protein-coding genes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 51(D1), pp. 46-56, January 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Kai-Pu Chen, Chia-Lang Hsu, Yen-Jen Oyang, Hsuan-Cheng Huang, Hsueh-Fen Juan |
BIC: a database for the transcriptional landscape of bacteria in cancer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 51(D1), pp. 1205-1211, January 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Antonios Klonizakis, Christoforos Nikolaou, Thomas Graf |
SEGCOND predicts putative transcriptional condensate-associated genomic regions by integrating multi-omics data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(1), January 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Anna Wierczeiko, Stefan Pastore, Stefan Mündnich, Anne M. Busch, Vincent Dietrich, Mark Helm, Tamer Butto, Susanne Gerber |
NanopoReaTA: a user-friendly tool for nanopore-seq real-time transcriptional analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(8), August 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Junmin Wang, Steven Novick |
DOSE-L1000: unveiling the intricate landscape of compound-induced transcriptional changes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(10), October 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Sumeer Ahmad Khan, Alberto Maillo, Vincenzo Lagani, Robert Lehmann 0002, Narsis A. Kiani, David Gomez-Cabrero, Jesper Tegnér |
Reusability report: Learning the transcriptional grammar in single-cell RNA-sequencing data using transformers. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nat. Mac. Intell. ![In: Nat. Mac. Intell. 5(12), pp. 1437-1446, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Tzu-Hsien Yang, Yu-Huai Yu, Sheng-Hang Wu, Fang-Yuan Zhang |
CFA: An explainable deep learning model for annotating the transcriptional roles of cis-regulatory modules based on epigenetic codes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 152, pp. 106375, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Alvaro Fletcher, Zeba Wunderlich, Germán A. Enciso |
Shadow enhancers mediate trade-offs between transcriptional noise and fidelity. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(5), 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Yahel Yedidya, Daniel Davis, Yotam Drier |
SARS-CoV-2 infection perturbs enhancer mediated transcriptional regulation of key pathways. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(8), 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Ruihao Li 0005, Jordan C. Rozum, Morgan M. Quail, Mohammad N. Qasim, Suzanne S. Sindi, Clarissa J. Nobile, Réka Albert, Aaron D. Hernday |
Inferring gene regulatory networks using transcriptional profiles as dynamical attractors. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 19(8), 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Abdus Samad, Md. Anowar Khasru Parvez, Md. Amdadul Huq, Md. Shahedur Rahman |
Transcriptional expression and prognostic roles of MCM7 in human bladder, breast, and lung cancers: a multi-omics analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Netw. Model. Anal. Health Informatics Bioinform. ![In: Netw. Model. Anal. Health Informatics Bioinform. 12(1), pp. 8, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Dylan Hirsch, Theodore W. Grunberg, Domitilla Del Vecchio |
Error Bound for Hill-Function Approximations in a Class of Stochastic Transcriptional Network Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CDC ![In: 62nd IEEE Conference on Decision and Control, CDC 2023, Singapore, December 13-15, 2023, pp. 3756-3763, 2023, IEEE, 979-8-3503-0124-3. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Ulysse Herbach |
Harissa: Stochastic Simulation and Inference of Gene Regulatory Networks Based on Transcriptional Bursting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CMSB ![In: Computational Methods in Systems Biology - 21st International Conference, CMSB 2023, Luxembourg City, Luxembourg, September 13-15, 2023, Proceedings, pp. 97-105, 2023, Springer, 978-3-031-42696-4. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Saloni Mahatma, Lisa Van den Broeck, Nicholas Morffy, Max V. Staller, Lucia C. Strader, Rosangela Sozzani |
Prediction and functional characterization of transcriptional activation domains. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CISS ![In: 57th Annual Conference on Information Sciences and Systems, CISS 2023, Baltimore, MD, USA, March 22-24, 2023, pp. 1-6, 2023, IEEE, 978-1-6654-5181-9. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
15 | Pedro H. A. Barros, Waldeyr M. C. Silva, Marcelo M. Brigido |
transcAnalysis: A Snakemake Pipeline for Differential Expression and Post-transcriptional Modification Analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology - 16th Brazilian Symposium on Bioinformatics, BSB 2023, Curitiba, Brazil, June 13-16, 2023, Proceedings, pp. 106-111, 2023, Springer, 978-3-031-42714-5. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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15 | Sue Yu, Jia Li 0039, Guanxu Ji, Zhen Long Ng, Jiamin Siew, Wan Ning Lo, Ying Ye, Yuan Yuan Chew, Yun Chau Long, Wensheng Zhang, Ernesto Guccione, Yuin Han Loh, Zhi-Hong Jiang, Henry Yang, Qiang Wu |
Npac Is A Co-factor of Histone H3K36me3 and Regulates Transcriptional Elongation in Mouse Embryonic Stem Cells. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Genom. Proteom. Bioinform. ![In: Genom. Proteom. Bioinform. 20(1), pp. 110-128, 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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15 | Zhiting Wei, Sheng Zhu, Xiaohan Chen, Chen-Yu Zhu, Bin Duan, Qi Liu 0019 |
DrSim: Similarity Learning for Transcriptional Phenotypic Drug Discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Genom. Proteom. Bioinform. ![In: Genom. Proteom. Bioinform. 20(5), pp. 1028-1036, October 2022. The full citation details ...](Pics/full.jpeg) |
2022 |
DBLP DOI BibTeX RDF |
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