Search results for "ubiquitination"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
36	YuZhong Zhao, Yun Xu, ZhiHao Wang, Changjiang Jin, Xinjiao Gao, Yu Xue 0001, Xuebiao Yao	Proteome-Wide Analysis of Amino Acid Absence in Composition and Plasticity.	ICIC (1)	2008	DBLP DOI BibTeX RDF	post-translational modification, amino acid absence, Keratin-associated proteins, ubiquitination
30	Mahdi Pourmirzaei, Shahin Ramazi, Farzaneh Esmaili, Seyedehsamaneh Shojaeilangari, Abdollah Allahvardi	Machine learning-based approaches for ubiquitination site prediction in human proteins.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
30	Karen E. Ross, Guolin Zhang, Cuneyt Akcora, Yu Lin, Bin Fang, John M. Koomen, Eric B. Haura, Mark Grimes	Network models of protein phosphorylation, acetylation, and ubiquitination connect metabolic and cell signaling pathways in lung cancer.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
30	Jay-Anne K. Johnson, Isaiah Sumner	On the Possibility That Bond Strain Is the Mechanism of RING E3 Activation in the E2-Catalyzed Ubiquitination Reaction.	J. Chem. Inf. Model.	2022	DBLP DOI BibTeX RDF
30	Chenwei Wang, Xiaodan Tan, Dachao Tang, Yujie Gou, Cheng Han, Wanshan Ning, Shaofeng Lin, Weizhi Zhang, Miaomiao Chen, Di Peng, Yu Xue 0001	GPS-Uber: a hybrid-learning framework for prediction of general and E3-specific lysine ubiquitination sites.	Briefings Bioinform.	2022	DBLP DOI BibTeX RDF
30	Liya Zhu, Han Cheng, Guoqing Peng, Shuansuo Wang, Zhiguo Zhang, Erdong Ni, Xiangdong Fu, Chuxiong Zhuang, Zexian Liu, Hai Zhou	Ubiquitinome Profiling Reveals the Landscape of Ubiquitination Regulation in Rice Young Panicles.	Genom. Proteom. Bioinform.	2020	DBLP DOI BibTeX RDF
30	Md. Parvez Mosharaf, Md. Mehedi Hasan 0002, Fee Faysal Ahmed, Mst. Shamima Khatun, Mohammad Ali Moni, Md. Nurul Haque Mollah	Computational prediction of protein ubiquitination sites mapping on Arabidopsis thaliana.	Comput. Biol. Chem.	2020	DBLP DOI BibTeX RDF
30	Hongli Fu, Yingxi Yang, Xiaobo Wang, Hui Wang, Yan Xu	DeepUbi: a deep learning framework for prediction of ubiquitination sites in proteins.	BMC Bioinform.	2019	DBLP DOI BibTeX RDF
30	Lihua Liu, David R. Damerell, Leonidas Koukouflis, Yufeng Tong 0001, Brian D. Marsden, Matthieu Schapira	UbiHub: a data hub for the explorers of ubiquitination pathways.	Bioinform.	2019	DBLP DOI BibTeX RDF
30	Sarthak Yadav, Manoj Gupta, Ankur Singh Bist	Prediction of Ubiquitination Sites Using UbiNets.	Adv. Fuzzy Syst.	2018	DBLP DOI BibTeX RDF
30	Mohanalakshmi Narasumani, Paul M. Harrison	Discerning evolutionary trends in post-translational modification and the effect of intrinsic disorder: Analysis of methylation, acetylation and ubiquitination sites in human proteins.	PLoS Comput. Biol.	2018	DBLP DOI BibTeX RDF
30	Van-Nui Nguyen, Kai-Yao Huang, Chien-Hsun Huang, K. Robert Lai, Tzong-Yi Lee	A New Scheme to Characterize and Identify Protein Ubiquitination Sites.	IEEE ACM Trans. Comput. Biol. Bioinform.	2017	DBLP DOI BibTeX RDF
30	Jyun-Rong Wang, Wen-Lin Huang, Ming-Ju Tsai, Kai-Ti Hsu, Hui-Ling Huang, Shinn-Ying Ho	ESA-UbiSite: accurate prediction of human ubiquitination sites by identifying a set of effective negatives.	Bioinform.	2017	DBLP DOI BibTeX RDF
30	Chunhui Xu, Wangren Qiu, Xuan Xiao, Dong Xu 0002	Computational prediction of ubiquitination protein using evolutionary profiles and functional domains.	BIBM	2017	DBLP DOI BibTeX RDF
30	Binghuang Cai, Xia Jiang	Computational methods for ubiquitination site prediction using physicochemical properties of protein sequences.	BMC Bioinform.	2016	DBLP DOI BibTeX RDF
30	K. Aurelia Ball, Jeffrey R. Johnson, Mary K. Lewinski, John Guatelli, Erik Verschueren, Nevan J. Krogan, Matthew P. Jacobson	Non-degradative Ubiquitination of Protein Kinases.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
30	Zhen Chen 0009, Yuan Zhou, Ziding Zhang, Jiangning Song	Towards more accurate prediction of ubiquitination sites: a comprehensive review of current methods, tools and features.	Briefings Bioinform.	2015	DBLP DOI BibTeX RDF
30	Shishan Deng, Baoqian Jing, Tianyong Xing, Lingmi Hou, Zhengwei Yang	Overexpression of Annexin A2 Is Associated with Abnormal Ubiquitination in Breast Cancer.	Genom. Proteom. Bioinform.	2012	DBLP DOI BibTeX RDF
30	Sjoerd J. L. van Wijk, Adrien S. J. Melquiond, Sjoerd Jacob de Vries, H. Th. Marc Timmers, Alexandre M. J. J. Bonvin	Dynamic Control of Selectivity in the Ubiquitination Pathway Revealed by an ASP to GLU Substitution in an Intra-Molecular Salt-Bridge Network.	PLoS Comput. Biol.	2012	DBLP DOI BibTeX RDF
30	Yipeng Du, Nanfang Xu, Ming Lu, Tingting Li	hUbiquitome: a database of experimentally verified ubiquitination cascades in humans.	Database J. Biol. Databases Curation	2011	DBLP DOI BibTeX RDF
30	Lan K. Nguyen, Javier Muñoz-García, Helene Maccario, Aaron Ciechanover, Walter Kolch, Boris N. Kholodenko	Switches, Excitable Responses and Oscillations in the Ring1B/Bmi1 Ubiquitination System.	PLoS Comput. Biol.	2011	DBLP DOI BibTeX RDF
30	Jin Liu 0005, Ruth Nussinov	The Mechanism of Ubiquitination in the Cullin-RING E3 Ligase Machinery: Conformational Control of Substrate Orientation.	PLoS Comput. Biol.	2009	DBLP DOI BibTeX RDF
30	Stefan Zeiser, O. Rivera, Christina Kuttler, Burkhard A. Hense, R. Lasser, G. Winkler	Oscillations of Hes7 caused by negative autoregulation and ubiquitination.	Comput. Biol. Chem.	2008	DBLP DOI BibTeX RDF
30	André Catic, Cal T. Collins, George M. Church, Hidde L. Ploegh	Preferred in vivo ubiquitination sites.	Bioinform.	2004	DBLP DOI BibTeX RDF