|
|
Venues (Conferences, Journals, ...)
|
|
GrowBag graphs for keyword ? (Num. hits/coverage)
Group by:
The graphs summarize 2639 occurrences of 1565 keywords
|
|
|
Results
Found 8097 publication records. Showing 8086 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
9 | Martin Larralde, Georg Zeller |
PyHMMER: a Python library binding to HMMER for efficient sequence analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(5), May 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yasser Mohseni Behbahani, Elodie Laine, Alessandra Carbone |
Deep Local Analysis deconstructs protein-protein interfaces and accurately estimates binding affinity changes upon mutation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(Supplement-1), pp. 544-552, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Davor Orsolic, Tomislav Smuc |
Dynamic applicability domain (dAD): compound-target binding affinity estimates with local conformal prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(8), August 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Qinhu Zhang, Pengrui Teng, Siguo Wang, Ying He, Zhen Cui, Zhenghao Guo, Yixin Liu, Changan Yuan 0001, Qi Liu 0019, De-Shuang Huang |
Computational prediction and characterization of cell-type-specific and shared binding sites. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(1), January 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yan Zhu 0006, Lingling Zhao, Naifeng Wen, Junjie Wang 0005, Chunyu Wang |
DataDTA: a multi-feature and dual-interaction aggregation framework for drug-target binding affinity prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(9), September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Mogan Gim, Junseok Choe, Seungheun Baek, Jueon Park, Chaeeun Lee, Minjae Ju, Sumin Lee, Jaewoo Kang |
ArkDTA: attention regularization guided by non-covalent interactions for explainable drug-target binding affinity prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(Supplement-1), pp. 448-457, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yang Hua, Xiaoning Song, Zhen-Hua Feng, Xiaojun Wu 0001 |
MFR-DTA: a multi-functional and robust model for predicting drug-target binding affinity and region. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(2), February 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Abbi Abdel-Rehim, Oghenejokpeme I. Orhobor, Hang Lou, Hao Ni, Ross D. King |
Protein-ligand binding affinity prediction exploiting sequence constituent homology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(8), August 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | My-Diem Nguyen Pham, Thanh-Nhan Nguyen, Le Son Tran, Que-Tran Bui Nguyen, Thien-Phuc Hoang Nguyen, Thi Mong Quynh Pham, Hoai-Nghia Nguyen, Hoa Giang, Minh-Duy Phan, Vy Nguyen |
epiTCR: a highly sensitive predictor for TCR-peptide binding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(5), May 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Alexander Myronov, Giovanni Mazzocco, Paulina Król, Dariusz Plewczynski |
BERTrand - peptide:TCR binding prediction using Bidirectional Encoder Representations from Transformers augmented with random TCR pairing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(8), August 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Vincenzo Laveglia, Milana Bazayeva, Claudia Andreini, Antonio Rosato |
Hunting down zinc(II)-binding sites in proteins with distance matrices. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(10), October 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Zixuan Wang, Shuwen Xiong, Yun Yu, Jiliu Zhou, Yongqing Zhang |
HAMPLE: deciphering TF-DNA binding mechanism in different cellular environments by characterizing higher-order nucleotide dependency. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(5), May 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yitian Fang, Yi Jiang, Leyi Wei, Qin Ma, Zhixiang Ren, Qianmu Yuan, Dong-Qing Wei |
DeepProSite: structure-aware protein binding site prediction using ESMFold and pretrained language model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(12), December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Genki Kudo, Takumi Hirao, Ryunosuke Yoshino, Yasuteru Shigeta, Takatsugu Hirokawa |
Pocket to concavity: a tool for the refinement of protein-ligand binding site shape from alpha spheres. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(4), April 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Jia-Ning Li, Guang Yang, Peng-Cheng Zhao, Xue-Xin Wei, Jian-Yu Shi |
CProMG: controllable protein-oriented molecule generation with desired binding affinity and drug-like properties. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(Supplement-1), pp. 326-336, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Zhi Jin, Tingfang Wu, Taoning Chen, Deng Pan, Xuejiao Wang, Jingxin Xie, Lijun Quan, Qiang Lyu |
CAPLA: improved prediction of protein-ligand binding affinity by a deep learning approach based on a cross-attention mechanism. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(2), February 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Ziqi Chen, Baoyi Zhang, Hongyu Guo, Prashant S. Emani, Trevor Clancy, Chongming Jiang, Mark Gerstein, Xia Ning, Chao Cheng, Martin Renqiang Min |
Binding peptide generation for MHC Class I proteins with deep reinforcement learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(2), February 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Dani Korpela, Emmi Jokinen, Alexandru Dumitrescu, Jani Huuhtanen, Satu Mustjoki, Harri Lähdesmäki |
EPIC-TRACE: predicting TCR binding to unseen epitopes using attention and contextualized embeddings. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(12), December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Wei Qu, Ronghui You, Hiroshi Mamitsuka, Shanfeng Zhu |
DeepMHCI: an anchor position-aware deep interaction model for accurate MHC-I peptide binding affinity prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 39(9), September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yunan Luo, Yang Liu, Jian Peng 0001 |
Calibrated geometric deep learning improves kinase-drug binding predictions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nat. Mac. Intell. ![In: Nat. Mac. Intell. 5(12), pp. 1390-1401, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yicheng Gao, Yuli Gao, Yuxiao Fan, Chengyu Zhu, Zhiting Wei, Chi Zhou 0003, Guohui Chuai, Qinchang Chen, He Zhang, Qi Liu 0019 |
Pan-Peptide Meta Learning for T-cell receptor-antigen binding recognition. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nat. Mac. Intell. ![In: Nat. Mac. Intell. 5(3), pp. 236-249, March 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Duolin Wang, Fei He 0003, Yang Yu, Dong Xu 0002 |
Meta-learning for T cell receptor binding specificity and beyond. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nat. Mac. Intell. ![In: Nat. Mac. Intell. 5(4), pp. 337-339, April 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Vitalii Stebliankin, Azam Shirali, Prabin Baral, Jimeng Shi, Prem Chapagain, Kalai Mathee, Giri Narasimhan |
Evaluating protein binding interfaces with transformer networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nat. Mac. Intell. ![In: Nat. Mac. Intell. 5(9), pp. 1042-1053, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Hannes Stärk, Bowen Jing, Regina Barzilay, Tommi S. Jaakkola |
Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding Site Design. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2310.05764, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Jobst Heitzig, Jörg Oechssler, Christoph Pröschel, Niranjana Ragavan, Yat Long Lo |
Improving International Climate Policy via Mutually Conditional Binding Commitments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2307.14267, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Aysenaz Ezgi Ergin, Deniz Turgay Altilar |
Consensus Algorithm For Calculation Of Protein Binding Affinity Using Multiple Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2301.10612, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Partho Ghosh, Md. Aynal Haque |
ResDTA: Predicting Drug-Target Binding Affinity Using Residual Skip Connections. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2303.11434, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Seokhyun Moon, Sang-Yeon Hwang, Jaechang Lim, Woo Youn Kim |
PIGNet2: A Versatile Deep Learning-based Protein-Ligand Interaction Prediction Model for Binding Affinity Scoring and Virtual Screening. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2307.01066, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Niels Mommen, Bart Jacobs 0002 |
Verifying C++ dynamic binding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2306.02073, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Jobst Heitzig, Jörg Oechssler, Christoph Pröschel, Niranjana Ragavan, Richie YatLong Lo |
Improving International Climate Policy via Mutually Conditional Binding Commitments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2307.14266, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Xinxing Yang, Genke Yang, Jian Chu |
GraphCL-DTA: a graph contrastive learning with molecular semantics for drug-target binding affinity prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2307.08989, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Md. Masud Rana 0008, Duc Duy Nguyen |
Geometric Graph Learning with Extended Atom-Types Features for Protein-Ligand Binding Affinity Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2301.06194, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Usama Sardar, Sarwan Ali, Muhammad Sohaib Ayub, Muhammad Shoaib, Khurram Bashir, Imdadullah Khan, Murray Patterson |
Sequence-Based Nanobody-Antigen Binding Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2308.01920, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Gilles Dowek, Thérèse Hardin, Claude Kirchner |
Binding Logic: proofs and models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2305.15782, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Qizhi Pei, Kaiyuan Gao, Lijun Wu, Jinhua Zhu, Yingce Xia, Shufang Xie 0003, Tao Qin 0001, Kun He 0001, Tie-Yan Liu, Rui Yan 0001 |
FABind: Fast and Accurate Protein-Ligand Binding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2310.06763, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Lech Duraj, Ross J. Kang, Hoang La, Jonathan Narboni, Filip Pokrývka, Clément Rambaud, Amadeus Reinald |
The χ-binding function of d-directional segment graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2309.06072, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Nimisha Ghosh, Daniele Santoni, Indrajit Saha, Giovanni Felici |
Predicting Transcription Factor Binding Sites using Transformer based Capsule Network. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2310.15202, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Maria Alejandra Ramirez, Yoav Kolumbus, Rosemarie Nagel, David H. Wolpert, Jürgen Jost |
Game Manipulators - the Strategic Implications of Binding Contracts. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2311.10586, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Colin Zhang, Yang Ha |
Developing novel ligands with enhanced binding affinity for the sphingosine 1-phosphate receptor 1 using machine learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2307.16037, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yang Wang, Zanyu Shi, Timothy Richardson, Kun Huang, Pathum Weerawarna, Yijie Wang |
Building explainable graph neural network by sparse learning for the drug-protein binding prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2309.12906, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Shiwei Liu, Tian Zhu, Milong Ren, Chungong Yu, Dongbo Bu, Haicang Zhang |
Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2310.19849, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Daeseok Lee, Bonggun Shin, Jeunghyun Byun |
Boosting Convolutional Neural Networks' Protein Binding Site Prediction Capacity Using SE(3)-invariant transformers, Transfer Learning and Homology-based Augmentation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2303.08818, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Pablo Herrera-Nieto, Adrià Pérez, Gianni De Fabritiis |
Binding-and-folding recognition of an intrinsically disordered protein using online learning molecular dynamics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2302.10348, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Xander Davies, Max Nadeau, Nikhil Prakash, Tamar Rott Shaham, David Bau |
Discovering Variable Binding Circuitry with Desiderata. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2307.03637, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Ho-Joon Lee, Prashant S. Emani, Mark B. Gerstein |
Improved prediction of ligand-protein binding affinities by meta-modeling. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2310.03946, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Royi Rassin, Eran Hirsch, Daniel Glickman, Shauli Ravfogel, Yoav Goldberg, Gal Chechik |
Linguistic Binding in Diffusion Models: Enhancing Attribute Correspondence through Attention Map Alignment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2306.08877, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Shikun Feng, Minghao Li, Yinjun Jia, Wei-Ying Ma, Yanyan Lan |
Protein-ligand binding representation learning from fine-grained interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2311.16160, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Dibyayan Chakraborty, L. Sunil Chandran, Dalu Jacob, Raji R. Pillai |
χ-binding functions for squares of bipartite graphs and its subclasses. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2312.08759, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Ruinan Ma, Yu-an Tan 0001, Shangbo Wu, Tian Chen, Yajie Wang, Yuanzhang Li |
Unified High-binding Watermark for Unconditional Image Generation Models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2310.09479, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Daniel Flam-Shepherd, Alán Aspuru-Guzik |
Language models can generate molecules, materials, and protein binding sites directly in three dimensions as XYZ, CIF, and PDB files. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2305.05708, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Shuo Zhang, Lei Xie |
Protein Language Model-Powered 3D Ligand Binding Site Prediction from Protein Sequence. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2312.03016, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Wenwu Zeng, Dafeng Lv, Wenjuan Liu, Shaoliang Peng |
ESM-NBR: fast and accurate nucleic acid-binding residue prediction via protein language model feature representation and multi-task learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2312.00842, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Zhangli Lu, Chuqi Lei, Kaili Wang, Libo Qin 0001, Jing Tang 0002, Min Li 0007 |
DTIAM: A unified framework for predicting drug-target interactions, binding affinities and activation/inhibition mechanisms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2312.15252, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Jiaxian Yan, Zhaofeng Ye, Ziyi Yang, Chengqiang Lu, Shengyu Zhang, Qi Liu, Jiezhong Qiu |
Multi-task Bioassay Pre-training for Protein-ligand Binding Affinity Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2306.04886, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Charles London, Douglas Brown, Wenduan Xu, Sezen Vatansever, Christopher James Langmead, Dimitri Kartsaklis, Stephen Clark, Konstantinos Meichanetzidis |
Peptide Binding Classification on Quantum Computers. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2311.15696, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Wengong Jin, Siranush Sarkizova, Xun Chen, Nir Hacohen, Caroline Uhler |
Unsupervised Protein-Ligand Binding Energy Prediction via Neural Euler's Rotation Equation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2301.10814, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | S. Banerjee, S. He Yuxun, S. Konakanchi, L. Ogunfowora, S. Roy, S. Selvaras, Laia Domingo, M. Chehimi, M. Djukic, C. Johnson |
A hybrid quantum-classical fusion neural network to improve protein-ligand binding affinity predictions for drug discovery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2309.03919, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yang Zhang, Wenbing Huang 0001, Zhewei Wei, Ye Yuan, Zhaohan Ding |
EquiPocket: an E(3)-Equivariant Geometric Graph Neural Network for Ligand Binding Site Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2302.12177, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Divya Nori, Simon V. Mathis, Amir Shanehsazzadeh |
Evaluating Zero-Shot Scoring for In Vitro Antibody Binding Prediction with Experimental Validation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2312.05273, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Pengfei Zhang, Seo-Jin Bang, Heewook Lee |
Active Learning Framework for Cost-Effective TCR-Epitope Binding Affinity Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2310.10893, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Duc-Vu Nguyen, Quoc-Nam Nguyen |
Evaluating the Symbol Binding Ability of Large Language Models for Multiple-Choice Questions in Vietnamese General Education. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2310.12059, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | V. A. Aksyuk |
Consciousness is learning: predictive processing systems that learn by binding may perceive themselves as conscious. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2301.07016, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Bill Tomlinson, Andrew W. Torrance, Rebecca W. Black, Donald J. Patterson |
Late-Binding Scholarship in the Age of AI: Navigating Legal and Normative Challenges of a New Form of Knowledge Production. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2305.11058, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Laia Domingo, M. Djukic, C. Johnson, Florentino Borondo |
Hybrid quantum-classical convolutional neural networks to improve molecular protein binding affinity predictions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2301.06331, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Minsi Ren, Bowen Gao, Bo Qiang, Yanyan Lan |
Delta Score: Improving the Binding Assessment of Structure-Based Drug Design Methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2311.12035, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Joao Victor de Souza, Victor H. R. Nogueira, Alessandro S. Nascimento |
Ligand binding free energy evaluation by Monte Carlo Recursion. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 103, pp. 107830, April 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Ke Li, Hongwei Wu, Zhenyu Yue, Yu Sun, Chuan Xia |
A convolutional network and attention mechanism-based approach to predict protein-RNA binding residues. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 105, pp. 107901, August 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Gaili Li, Yongna Yuan, Ruisheng Zhang |
Ensemble of local and global information for Protein-Ligand Binding Affinity Prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 107, pp. 107972, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Helmi Husaini Zainal Fithri, Zalikha Ibrahim, Ernie Zuraida Ali |
Impact of GSK199 and GSK106 binding on protein arginine deiminase IV stability and flexibility: A computational approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 107, pp. 107962, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Gelany Aly Abdelkader, Soualihou Ngnamsie Njimbouom, Tae-Jin Oh, Jeong-Dong Kim |
ResBiGAAT: Residual Bi-GRU with attention for protein-ligand binding affinity prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 107, pp. 107969, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yuemin Liu, Hana F. Sulaiman, Bruce R. Johnson, Rulong Ma, Yunxiang Gao, Harshica Fernando, Ananda Amarasekara, Andrea Ashley-Oyewole, Huajun Fan, Heaven N. Ingram, James M. Briggs |
QM/MM study of N501 involved intermolecular interaction between SARS-CoV-2 receptor binding domain and antibody of human origin. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 102, pp. 107810, February 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Elaheh Movahedi, Hafez Razmazma, Alireza Rezvani, Ali Ebrahimi |
Binding profile of a mixed-ligand silver(I) complex with DNA and Topoisomerase I. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 103, pp. 107831, April 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Atanuka Paul, Sabyashachi Mishra |
Deciphering the role of the two metal-binding sites of DapE enzyme via metal substitution. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 103, pp. 107832, April 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Shraddha Parate, Vikas Kumar, Jong Chan Hong, Keun Woo Lee |
Investigation of Macrocyclic mTOR Modulators of Rapamycin Binding Site via Pharmacoinformatics Approaches. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 104, pp. 107875, June 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yann Braouezec, Keyvan Kiani |
Economic foundations of generalized games with shared constraint: Do binding agreements lead to less Nash equilibria? ![Search on Bibsonomy](Pics/bibsonomy.png) |
Eur. J. Oper. Res. ![In: Eur. J. Oper. Res. 308(1), pp. 467-479, July 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Ke Chen, Lili Ge, Guorui Liu |
Integrated in silico-in vitro rational design of oncogenic EGFR-derived specific monoclonal antibody-binding peptide mimotopes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Bioinform. Comput. Biol. ![In: J. Bioinform. Comput. Biol. 21(2), pp. 2350007:1-2350007:14, April 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Hongliang Zou, Zizheng Yu, Zhijian Yin |
Integrating temporal and spatial variabilities for identifying ion binding proteins in phage. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Bioinform. Comput. Biol. ![In: J. Bioinform. Comput. Biol. 21(3), pp. 2350010:1-2350010:11, June 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Ali Adel Dawood |
Simulate the agarose gel of the receptor binding domain in Omicron's spike protein inserted into the pGEM®-T Easy vector using SpeI and SacI restriction enzymes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Int. J. Comput. Biol. Drug Des. ![In: Int. J. Comput. Biol. Drug Des. 15(6), pp. 518-526, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Hang Xu, Xianfu Yi, Xutong Fan, Chengyue Wu, Wei Wang, Xinlei Chu, Shijie Zhang, Xiaobao Dong, Zhao Wang, Jianhua Wang, Yao Zhou, Ke Zhao, Hongcheng Yao, Nan Zheng, Junwen Wang, Yupeng Chen, Dariusz Plewczynski, Pak Chung Sham, Kexin Chen, Dandan Huang, Mulin Jun Li |
Inferring CTCF-binding patterns and anchored loops across human tissues and cell types. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Patterns ![In: Patterns 4(8), pp. 100798, August 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Sheng-Wei Lin, Eugenia Y. Huang, Kai-Teng Cheng |
A binding tie: why do customers stick to omnichannel retailers? ![Search on Bibsonomy](Pics/bibsonomy.png) |
Inf. Technol. People ![In: Inf. Technol. People 36(3), pp. 1126-1159, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Sri Kusumadewi, Linda Rosita, Elyza Gustri Wahyuni |
Implementation of fuzzy associative memory toward optimizing a neural network model to predict total iron binding capacity. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Biomed. Signal Process. Control. ![In: Biomed. Signal Process. Control. 86(Part C), pp. 105297, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Benjamin Schwartz |
Service Binding Mapping for DNS Servers. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RFC ![In: RFC 9461, pp. 1-10, November 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Ben Schwartz, Mike Bishop, Erik Nygren |
Service Binding and Parameter Specification via the DNS (SVCB and HTTPS Resource Records). ![Search on Bibsonomy](Pics/bibsonomy.png) |
RFC ![In: RFC 9460, pp. 1-47, November 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Massimo Pregnolato, Paola Zizzi |
SARS-CoV-2 spike and ACE2 entanglement-like binding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Quantum Mach. Intell. ![In: Quantum Mach. Intell. 5(1), pp. 1-13, June 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Sayed Haidar Abbas Raza, Ruimin Zhong, Shen Xing, Xiaoting Yu, Liang Chengcheng, Linsen Zan, Nicola M. Schreurs, Sameer D. Pant, Hongtao Lei |
Based on the Cancer Genome Atlas Database Development of a prognostic model of RNA binding protein in stomach adenocarcinoma. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 164, pp. 107307, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yutong Ming, Hongzhi Liu, Yizhi Cui, Shaoyong Guo, Yijie Ding, Ruijun Liu |
Identification of DNA-binding proteins by Kernel Sparse Representation via L2,1-matrix norm. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 159, pp. 106849, June 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Yongsan Liu, Shixuan Guan, Tengsheng Jiang, Qiming Fu 0001, Jieming Ma, Zhiming Cui, Yijie Ding, Hongjie Wu |
DNA protein binding recognition based on lifelong learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 164, pp. 107094, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Arzu Mijit, Xiaona Wang, Yanlin Li, Hangwei Xu, Yingjun Chen, Weiwei Xue |
Mapping synthetic binding proteins epitopes on diverse protein targets by protein structure prediction and protein-protein docking. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 163, pp. 107183, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Xue Zhang, Jingcheng Wu, Joseph Baeza, Katie Gu, Yichun Zheng, Shuqing Chen, Zhan Zhou |
DeepTAP: An RNN-based method of TAP-binding peptide prediction in the selection of tumor neoantigens. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 164, pp. 107247, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Muhammad K. N. Mursalim, Tati Latifah Rajab Mengko, Rukman Hertadi, Ayu Purwarianti, Meredita Susanty |
BiCaps-DBP: Predicting DNA-binding proteins from protein sequences using Bi-LSTM and a 1D-capsule network. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 163, pp. 107241, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Kejie Fang, Yiming Zhang, Shiyu Du, Jian He |
ColdDTA: Utilizing data augmentation and attention-based feature fusion for drug-target binding affinity prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 164, pp. 107372, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Chuqi Lei, Zhangli Lu, Meng Wang, Min Li 0007 |
StackCPA: A stacking model for compound-protein binding affinity prediction based on pocket multi-scale features. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 164, pp. 107131, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Jiwei Pan, Yueying Gao, Huirui Han, Tao Pan, Jing Guo, Si Li, Juan Xu 0001, Yongsheng Li 0001 |
Multi-omics characterization of RNA binding proteins reveals disease comorbidities and potential drugs in COVID-19. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 155, pp. 106651, March 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Md. Masud Rana 0008, Duc Duy Nguyen |
Geometric graph learning with extended atom-types features for protein-ligand binding affinity prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 164, pp. 107250, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Lei Li, Zhigang Xue, Xiuquan Du |
ASCRB: Multi-view based attentional feature selection for CircRNA-binding site prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 162, pp. 107077, August 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Maryam Jama, Marawan Ahmed, Anna Jutla, Carson Wiethan, Jitendra Kumar, Tae Chul Moon, Frederick West, Michael Overduin, Khaled H. Barakat |
Discovery of allosteric SHP2 inhibitors through ensemble-based consensus molecular docking, endpoint and absolute binding free energy calculations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 152, pp. 106442, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Sneha Krishnamoorthy, Bharathi Muruganantham, Jae-Ran Yu, Woo-Yoon Park, Sridhar Muthusami |
Exploring the utility of FTS as a bonafide binding partner for EGFR: A potential drug target for cervical cancer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 167, pp. 107592, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Rishab Panda, Pritam K. Panda, Janarthanan Krishnamoorthy, Rajiv K. Kar |
Network analysis of chromophore binding site in LOV domain. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 161, pp. 106996, July 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Priyanka Samanta, Robert J. Doerksen |
Identifying FmlH lectin-binding small molecules for the prevention of Escherichia coli-induced urinary tract infections using hybrid fragment-based design and molecular docking. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 163, pp. 107072, September 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
9 | Li Zhang, Chun-Chun Wang, Yong Zhang, Xing Chen 0001 |
GPCNDTA: Prediction of drug-target binding affinity through cross-attention networks augmented with graph features and pharmacophores. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Medicine ![In: Comput. Biol. Medicine 166, pp. 107512, November 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
|
|