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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 107 occurrences of 66 keywords
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Results
Found 19409 publication records. Showing 19409 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
6 | Jin Du, Chaojie Wang 0008, Lijun Wang, Shanjun Mao, Bencong Zhu, Zheng Li, Xiaodan Fan |
Automatic block-wise genotype-phenotype association detection based on hidden Markov model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 138, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Maia H. Malonzo, Harri Lähdesmäki |
LuxHMM: DNA methylation analysis with genome segmentation via hidden Markov model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 58, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Noah Herrick, Susan Walsh |
ILIAD: a suite of automated Snakemake workflows for processing genomic data for downstream applications. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 424, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Hanjing Jiang, Yabing Huang, Qianpeng Li, Boyuan Feng |
ScLSTM: single-cell type detection by siamese recurrent network and hierarchical clustering. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 417, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Aimin Yan, Cristina Baricordi, Quoc Nguyen, Luigi Barbarossa, Mariana Loperfido, Luca Biasco |
IS-Seq: a bioinformatics pipeline for integration sites analysis with comprehensive abundance quantification methods. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 286, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Li Guo, Yangyang Xiang, Yuyang Dou, Zibo Yin, Xinru Xu, Lihua Tang, Jiafeng Yu, Jun Wang 0031, Tingming Liang |
GBCdb: RNA expression landscapes and ncRNA-mRNA interactions in gallbladder carcinoma. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 12, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Hai-Ming Feng, Ye Zhao, Wei-Jian Yan, Bin Li |
Genomic and immunogenomic analysis of three prognostic signature genes in LUAD. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 19, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Jing Huang, Yuting Zhou, Haoran Zhang, Yiming Wu |
A neural network model to screen feature genes for pancreatic cancer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 193, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Qiaonan Duan, Weiyi Wang, Feiling Feng, Xiaoqing Jiang, Hao Chen, Dadong Zhang, Tongyi Zhang |
Comut-viz: efficiently creating and browsing comutation plots online. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 226, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Tomoya Mori, Toshiro Takase, Kuan-Chun Lan, Junko Yamane, Cantas Alev, Azuma Kimura, Kenji Osafune, Jun K. Yamashita, Tatsuya Akutsu, Hiroaki Kitano, Wataru Fujibuchi |
eSPRESSO: topological clustering of single-cell transcriptomics data to reveal informative genes for spatio-temporal architectures of cells. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 252, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Jitong Cai, Jianan Zhan, Dan E. Arking, Joel S. Bader |
Priors, population sizes, and power in genome-wide hypothesis tests. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 170, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Senay Kafkas, Marwa Abdelhakim, Mahmut Uludag, Azza Althagafi, Malak Alghamdi, Robert Hoehndorf |
Starvar: symptom-based tool for automatic ranking of variants using evidence from literature and genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 294, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Richard Border, Osman Asif Malik |
rBahadur: efficient simulation of structured high-dimensional genotype data with applications to assortative mating. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 314, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Daniel Dorey-Robinson, Giuseppe Maccari, John A. Hammond |
IgMAT: immunoglobulin sequence multi-species annotation tool for any species including those with incomplete antibody annotation or unusual characteristics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 491, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Mathias Cardner, Francesco Marass, Erika Gedvilaite, Julie L. Yang, Dana W. Y. Tsui, Niko Beerenwinkel |
Predicting tumour content of liquid biopsies from cell-free DNA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 368, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Juan Domingo, Teresa León, Esther Durá |
Scellpam: an R package/C++ library to perform parallel partitioning around medoids on scRNAseq data sets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 342, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Lei Wang, Han Cao 0005, Liu Yuan 0001, Xiaoxu Guo, Yachao Cui |
Child-Sum EATree-LSTMs: enhanced attentive Child-Sum Tree-LSTMs for biomedical event extraction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 253, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Yunqing Liu, Jiayi Zhao, Taylor Sterling Adams, Ningya Wang, Jonas Schupp, Weimiao Wu, John E. McDonough, Geoffrey Lowell Chupp, Naftali Kaminski, Zuoheng Wang, Xiting Yan |
iDESC: identifying differential expression in single-cell RNA sequencing data with multiple subjects. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 318, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Lacey W. Heinsberg, Daniel E. Weeks |
dbGaPCheckup: pre-submission checks of dbGaP-formatted subject phenotype files. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 77, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Abdullah Karaaslanli, Satabdi Saha, Tapabrata Maiti, Selin Aviyente |
Kernelized multiview signed graph learning for single-cell RNA sequencing data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 127, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Marilyn Gatica, Carlos F. Navarro, Alejandro Lavado, German Reig, Eduardo Pulgar, Paula Llanos, Steffen Härtel, Andrea Ravasio, Cristina Bertocchi, Miguel L. Concha, Mauricio Cerda |
VolumePeeler: a novel FIJI plugin for geometric tissue peeling to improve visualization and quantification of 3D image stacks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 283, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Yiyun Rao, Nabeel Ahmed, Justin Pritchard, Edward P. O'Brien |
Incorporating mutational heterogeneity to identify genes that are enriched for synonymous mutations in cancer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 462, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | K. Syama, J. Angel Arul Jothi, Namita Khanna |
Automatic disease prediction from human gut metagenomic data using boosting GraphSAGE. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 126, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Lingzhi Hu, Chengzhou Fu, Zhonglu Ren, Yongming Cai, Jin Yang 0004, Siwen Xu, Wenhua Xu, Deyu Tang |
SSELM-neg: spherical search-based extreme learning machine for drug-target interaction prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 38, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Jiaxing Chen, Yen Kaow Ng, Lu Lin, Xianglilan Zhang, Shuaicheng Li |
On triangle inequalities of correlation-based distances for gene expression profiles. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 40, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Yauheniya Zhdanovich, Jörg Ackermann 0001, Peter J. Wild, Jens Köllermann, Katrin Bankov, Claudia Döring 0002, Nadine Flinner, Henning Reis, Mike Wenzel, Benedikt Höh, Philipp Mandel, Thomas J. Vogl, Patrick Harter, Katharina Filipski, Ina Koch, Simon Bernatz |
Evaluation of automatic discrimination between benign and malignant prostate tissue in the era of high precision digital pathology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 1, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Robert J. Millikin, Kalpana Raja, John W. Steill, Cannon Lock, Xuancheng Tu, Ian Ross, Lam C. Tsoi, Finn Kuusisto, Zijian Ni, Miron Livny, Brian Bockelman, James A. Thomson, Ron M. Stewart |
Serial KinderMiner (SKiM) discovers and annotates biomedical knowledge using co-occurrence and transformer models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 412, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Grégoire Prunier, Mehdi Cherkaoui, Albane Lysiak, Olivier Langella, Mélisande Blein-Nicolas, Virginie Lollier, Emile Benoist, Géraldine Jean, Guillaume Fertin, Hélène Rogniaux, Dominique Tessier |
Fast alignment of mass spectra in large proteomics datasets, capturing dissimilarities arising from multiple complex modifications of peptides. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 421, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Sven Berres, Jörg Gromoll, Marius Wöste, Sarah Sandmann, Sandra Laurentino |
OGRE: calculate, visualize, and analyze overlap between genomic input regions and public annotations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 300, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Mingwei Pang, Wangqiu He, Xufeng Lu, Yuting She, Liangxu Xie, Ren Kong, Shan Chang |
CoDock-Ligand: combined template-based docking and CNN-based scoring in ligand binding prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 444, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Chaozhong Liu, Linhua Wang, Zhandong Liu |
Correction: Single-cell multi-omics integration for unpaired data by a siamese network with graph-based contrastive loss. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 123, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Rajnish Kumar, Rajkrishna Mondal, Tapobrata Lahiri, Manoj Kumar Pal |
Application of sequence semantic and integrated cellular geography approach to study alternative biogenesis of exonic circular RNA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 148, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | William Breslin, Doan Pham |
Machine learning and drug discovery for neglected tropical diseases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 165, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Christoffer Trier Maansson, Emma Roger Andersen, Maiken Parm Ulhoi, Peter Meldgaard, Boe Sandahl Sorensen |
DNAfusion: an R/Bioconductor package for increased sensitivity of detecting gene fusions in liquid biopsies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 131, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Aleksandr Kotov, Andrei Zinovyev, Anne-Helene Monsoro-Burq |
scEvoNet: a gradient boosting-based method for prediction of cell state evolution. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 83, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Katerina Faltejsková, Jirí Vondrásek |
PAPerFly: Partial Assembly-based Peak Finder for ab initio binding site reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 487, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Thummarat Paklao, Apichat Suratanee, Kitiporn Plaimas |
ICON-GEMs: integration of co-expression network in genome-scale metabolic models, shedding light through systems biology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 492, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
|
6 | Arnaud Ferré, Philippe Langlais |
An analysis of entity normalization evaluation biases in specialized domains. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 227, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Ksenia Zlobina, Eric Malekos, Han Chen, Marcella Gomez |
Robust classification of wound healing stages in both mice and humans for acute and burn wounds based on transcriptomic data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 166, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Muhammad Asif 0009, Hugo F. M. C. Martiniano, Andre Lamurias, Samina Kausar, Francisco M. Couto |
DGH-GO: dissecting the genetic heterogeneity of complex diseases using gene ontology. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 171, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Yuanyuan Zhang, Yinfei Feng, Mengjie Wu, Zengqian Deng, Shudong Wang |
VGAEDTI: drug-target interaction prediction based on variational inference and graph autoencoder. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 278, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Cansu Alakus, Denis Larocque, Aurélie Labbe |
Covariance regression with random forests. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 258, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Mahdi Pourmirzaei, Shahin Ramazi, Farzaneh Esmaili, Seyedehsamaneh Shojaeilangari, Abdollah Allahvardi |
Machine learning-based approaches for ubiquitination site prediction in human proteins. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 449, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Timothy Dunn, David T. Blaauw, Reetuparna Das, Satish Narayanasamy |
nPoRe: n-polymer realigner for improved pileup-based variant calling. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 98, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Kai Chen, Xiaodong Zhu 0001, Jiahao Wang, Lei Hao, Zhen Liu, Yuanning Liu |
ncDENSE: a novel computational method based on a deep learning framework for non-coding RNAs family prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 68, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Negar Hossein-Nezhad Daneshvar, Yosef Masoudi-Sobhanzadeh, Yadollah Omidi |
A voting-based machine learning approach for classifying biological and clinical datasets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 140, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Haitham Elmarakeby, Pavel S. Trukhanov, Vidal M. Arroyo, Irbaz Bin Riaz, Deborah Schrag, Eliezer M. Van Allen, Kenneth L. Kehl |
Empirical evaluation of language modeling to ascertain cancer outcomes from clinical text reports. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 328, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Patrick M. Carry, Tim Vigers, Lauren A. Vanderlinden, Carson Keeter, Fran Dong, Teresa Buckner, Elizabeth Litkowski, Ivana Yang, Jill M. Norris, Katherina J. Kechris |
Propensity scores as a novel method to guide sample allocation and minimize batch effects during the design of high throughput experiments. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 86, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Irena Roterman, Katarzyna Stapor, Leszek Konieczny |
Ab initio protein structure prediction: the necessary presence of external force field as it is delivered by Hsp40 chaperone. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 418, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Mpho Mokoatle, Vukosi Marivate, Darlington S. Mapiye, Riana Bornman, Vanessa M. Hayes |
A review and comparative study of cancer detection using machine learning: SBERT and SimCSE application. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 112, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Yangyang Xie, Xue Song, Danwei Du, Zhongkai Ni, Hai Huang |
Identification of cuproptosis-related lncRNAs to predict prognosis and immune infiltration characteristics in alimentary tract malignancies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 184, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, Dónal Landers, André Freitas |
A systematic review of biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 198, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Valentina Nale, Alice Chiodi, Noemi Di Nanni, Ingrid Cifola, Marco Moscatelli, Cinzia Cocola, Matteo Gnocchi, Eleonora Piscitelli, Ada Sula, Ileana Zucchi, Rolland A. Reinbold, Luciano Milanesi, Alessandra Mezzelani, Paride Pelucchi, Ettore Mosca |
scMuffin: an R package to disentangle solid tumor heterogeneity by single-cell gene expression analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 445, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Misung Yi, Tingting Zhan, Amy R. Peck, Jeffrey Hooke, Albert J. Kovatich, Craig D. Shriver, Hai Hu, Yunguang Sun, Hallgeir Rui, Inna Chervoneva |
Selection of optimal quantile protein biomarkers based on cell-level immunohistochemistry data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 298, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Warith Eddine Djeddi, Khalil Hermi, Sadok Ben Yahia, Gayo Diallo |
Advancing drug-target interaction prediction: a comprehensive graph-based approach integrating knowledge graph embedding and ProtBert pretraining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 488, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Michael J. Kane, Casey King, Denise Esserman, Nancy K. Latham, Erich J. Greene, David A. Ganz |
A compressed large language model embedding dataset of ICD 10 CM descriptions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 482, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Xue-Qin Chen, Jie Ma, Di Xu, Zuo-Lin Xiang |
Comprehensive analysis of KLF2 as a prognostic biomarker associated with fibrosis and immune infiltration in advanced hepatocellular carcinoma. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 270, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Saiyidan Yalimaimaiti, Xiaoqiao Liang, Haili Zhao, Hong Dou, Wei Liu, Ying Yang, Li Ning 0007 |
Establishment of a prognostic signature for lung adenocarcinoma using cuproptosis-related lncRNAs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 81, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Völundur Hafstað, Jari Häkkinen, Helena Persson |
Fast and sensitive validation of fusion transcripts in whole-genome sequencing data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 359, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Liang Chen, Yiming Weng, Xue Cui, Qian Li, Min Peng 0002, Qibin Song |
Comprehensive analyses of a CD8+ T cell infiltration related gene signature with regard to the prediction of prognosis and immunotherapy response in lung squamous cell carcinoma. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 238, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Kun Wang, Xiao Zhang, Hansen Cheng, Wenhao Ma, Guangchao Bao, Liting Dong, Yixiong Gou, Jian Yang, Haoyang Cai |
SingleScan: a comprehensive resource for single-cell sequencing data processing and mining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 463, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Zuming Xiong, Wenxin Li, Xiangrong Luo, Yirong Lin, Wei Huang, Sen Zhang |
Seven bacterial response-related genes are biomarkers for colon cancer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 103, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Chenyu Ma, Yuanbo Shi, Yueyang Huang, Gongwei Dai |
Raman spectroscopy-based prediction of ofloxacin concentration in solution using a novel loss function and an improved GA-CNN model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 409, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Willow Carretero Chavez, Marcus Krantz, Edda Klipp, Irina Kufareva |
kboolnet: a toolkit for the verification, validation, and visualization of reaction-contingency (rxncon) models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 246, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Damian J. Magill, Timofey A. Skvortsov |
DePolymerase Predictor (DePP): a machine learning tool for the targeted identification of phage depolymerases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 208, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Pasquale Claudio Africa, Roberto Piersanti, Francesco Regazzoni 0002, Michele Bucelli, Matteo Salvador, Marco Fedele, Stefano Pagani, Luca Dede', Alfio Quarteroni |
lifex-ep: a robust and efficient software for cardiac electrophysiology simulations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 389, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Na Zhang, Juan Liu 0007, Yu Jin, Wensi Duan, Ziling Wu, Zhaohui Cai, Meng Wu |
An adaptive multi-modal hybrid model for classifying thyroid nodules by combining ultrasound and infrared thermal images. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 315, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Huijing Yu, Zhenxian Zheng, Junhao Su, Tak Wah Lam, Ruibang Luo |
Boosting variant-calling performance with multi-platform sequencing data using Clair3-MP. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 308, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Pawel Pratyush, Suresh Pokharel, Hiroto Saigo, Dukka B. KC |
pLMSNOSite: an ensemble-based approach for predicting protein S-nitrosylation sites by integrating supervised word embedding and embedding from pre-trained protein language model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 41, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Mustafa Siddiqui, Gavin C. Conant |
POInTbrowse: orthology prediction and synteny exploration for paleopolyploid genomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 174, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Seokjin Han, Jinhee Hong, So Jeong Yun, Hee Jung Koo, Tae Yong Kim |
PWN: enhanced random walk on a warped network for disease target prioritization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 105, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Jianjun Zhang, Xiaoyu Liang, Samantha Gonzales, Jianguo Liu, Xiaoyi Raymond Gao, Xuexia Wang |
A gene based combination test using GWAS summary data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 2, 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Xusheng Zhang, Yongxin Ma, Kejun Liu, Long Chen, Lin Ding, Weihu Ma, Bendong Chen |
Risk prediction for dermatomyositis-associated hepatocellular carcinoma. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 222, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Ye Yuan, Qushuo Chen, Jun Mao, Guipeng Li, Xiaoyong Pan |
DG-Affinity: predicting antigen-antibody affinity with language models from sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 430, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Marc Vaisband, Maria Schubert, Franz Josef Gassner, Roland Geisberger, Richard Greil, Nadja Zaborsky, Jan Hasenauer |
Validation of genetic variants from NGS data using deep convolutional neural networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 158, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Koen Swaerts, Franceska Dedeurwaerdere, Dieter De Smet, Peter De Jaeger, Geert A. Martens |
DeltaMSI: artificial intelligence-based modeling of microsatellite instability scoring on next-generation sequencing data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 73, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | He Zhao, Guixia Liu, Xintian Cao |
A seed expansion-based method to identify essential proteins by integrating protein-protein interaction sub-networks and multiple biological characteristics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 452, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Kristina Lietz, Babak Saremi, Lena Wiese |
Genealyzer: web application for the analysis and comparison of gene expression data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 150, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Sungyoung Lee, Choong-Hyun Sun, Heejun Jang, Daeyoon Kim, Sung-Soo Yoon, Youngil Koh, Seung Chan Na, Sung Im Cho, Man Jin Kim, Moon-Woo Seong, Ja Min Byun, Hongseok Yun |
ITDetect: a method to detect internal tandem duplication of FMS-like tyrosine kinase (FLT3) from next-generation sequencing data with high sensitivity and clinical application. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 62, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Tao Jiang 0021, Shiqi Liu, Hongzhe Guo |
Reply: Correspondence on NanoVar's performance outlined by Jiang T. et al. in 'Long-read sequencing settings for efficient structural variation detection based on comprehensive evaluation'. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 352, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Ranze Xie, Xiangzhen Zan, Ling Chu, Yanqing Su, Peng Xu, Wenbin Liu |
Study of the error correction capability of multiple sequence alignment algorithm (MAFFT) in DNA storage. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 111, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Yongxian Fan, Hui Xiong, Guicong Sun |
DeepASDPred: a CNN-LSTM-based deep learning method for Autism spectrum disorders risk RNA identification. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 261, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Meghana V. Palukuri, Ridhi S. Patil, Edward M. Marcotte |
Molecular complex detection in protein interaction networks through reinforcement learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 306, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Shaoming Pan, Xin Liu, Ningdi Xie, Yanwen Chong |
EG-TransUNet: a transformer-based U-Net with enhanced and guided models for biomedical image segmentation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 85, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Nicholas K. O'Neill, Thor D. Stein, Junming Hu, Habbiburr Rehman, Joshua D. Campbell, Masanao Yajima, Xiaoling Zhang, Lindsay A. Farrer |
Bulk brain tissue cell-type deconvolution with bias correction for single-nuclei RNA sequencing data using DeTREM. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 349, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Giulia Russo, Elena Crispino, Avisa Maleki, Valentina Di Salvatore, Filippo Stanco, Francesco Pappalardo 0001 |
Beyond the state of the art of reverse vaccinology: predicting vaccine efficacy with the universal immune system simulator for influenza. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 231, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Pegah Mavaie, Lawrence Holder, Michael K. Skinner |
Hybrid deep learning approach to improve classification of low-volume high-dimensional data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 419, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
DBLP DOI BibTeX RDF |
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6 | Olga Valenzuela, Mario Cannataro, Irena Rusur, Jianxin Wang 0001, Zhongming Zhao, Ignacio Rojas |
Advances and challenges in Bioinformatics and Biomedical Engineering: IWBBIO 2020. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24-S(1), pp. 361, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Yongxian Fan, Xiqian Lu, Guicong Sun |
IHCP: interpretable hepatitis C prediction system based on black-box machine learning models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 333, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | P. Kavitha, G. Ayyappan, Prabhu Jayagopal, Sandeep Kumar Mathivanan 0001, Saurav Mallik, Amal Al-Rasheed, Mohammed S. Alqahtani, Ben Othman Soufiene |
Detection for melanoma skin cancer through ACCF, BPPF, and CLF techniques with machine learning approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 458, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Jiaxiang Jiang, Michael Goebel, Cezar Borba, William Smith 0001, B. S. Manjunath |
A robust approach to 3D neuron shape representation for quantification and classification. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 366, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Jingwen Suo, Lize Gu, Xingyu Yan, Sijia Yang, Xiaoya Hu, Licheng Wang |
PP-DDP: a privacy-preserving outsourcing framework for solving the double digest problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 34, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Yining Liu, Yinuo Jin, Elham Azizi, Andrew J. Blumberg |
Cellstitch: 3D cellular anisotropic image segmentation via optimal transport. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 480, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | F. Adriaan Lategan, Caroline Schreiber, Hugh-George Patterton |
SeqPredNN: a neural network that generates protein sequences that fold into specified tertiary structures. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 373, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Hatice Yagmur Zengin, Erdem Karabulut |
Biomarker detection using corrected degree of domesticity in hybrid social network feature selection for improving classifier performance. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 407, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Junwei Luo, Yading Feng, Xuyang Wu, Ruimin Li, Jiawei Shi, Wenjing Chang, Junfeng Wang |
ForestSubtype: a cancer subtype identifying approach based on high-dimensional genomic data and a parallel random forest. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 289, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Xiangjun Ji, Junwei Cai, Lixin Liang, Tieliu Shi, Jinghua Liu |
Gene expression variability across cells and species shapes the relationship between renal resident macrophages and infiltrated macrophages. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 72, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Zahra Ghorbanali, Fatemeh Zare-Mirakabad, Najmeh Salehi, Mohammad Akbari, Ali Masoudi-Nejad |
DrugRep-HeSiaGraph: when heterogenous siamese neural network meets knowledge graphs for drug repurposing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 374, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Malu Luz Calle, Meritxell Pujolassos, Antonio Susín |
coda4microbiome: compositional data analysis for microbiome cross-sectional and longitudinal studies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 82, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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6 | Tomás Bruna, Heng Li, Joseph Guhlin, Daniel Honsel, Steffen Herbold, Mario Stanke, Natalia Nenasheva, Matthis Ebel, Lars Gabriel, Katharina Jasmin Hoff |
Galba: genome annotation with miniprot and AUGUSTUS. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 24(1), pp. 327, December 2023. The full citation details ...](Pics/full.jpeg) |
2023 |
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