Search results for "BMC"

Hits ?▲	Authors	Title	Venue	Year	Link
6	Qing Ma, Yaqin Tan, Lei Wang	GACNNMDA: a computational model for predicting potential human microbe-drug associations based on graph attention network and CNN-based classifier.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Michael Olbrich, Axel Künstner, Hauke Busch	MBECS: Microbiome Batch Effects Correction Suite.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Anne Guichard, Fabrice Legeai, Denis Tagu, Claire Lemaitre	MTG-Link: leveraging barcode information from linked-reads to assemble specific loci.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Nassim Versbraegen, Barbara Gravel, Charlotte Nachtegael, Alexandre Renaux, Emma Verkinderen, Ann Nowé, Tom Lenaerts, Sofia Papadimitriou	Faster and more accurate pathogenic combination predictions with VarCoPP2.0.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Chao Cao, Shuhong Yang, Mengli Li, Chungui Li	CircSSNN: circRNA-binding site prediction via sequence self-attention neural networks with pre-normalization.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Fedor Sharko, Golam Rbbani, Prabhugouda Siriyappagouder, Joost A. M. Raeymaekers, Jorge Galindo-Villegas, Artem Nedoluzhko, Jorge M. O. Fernandes	CircPrime: a web-based platform for design of specific circular RNA primers.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Junjie Zhang, Guoli Ji, Xilin Gao, Jinting Guan	Single-nucleus gene and gene set expression-based similarity network fusion identifies autism molecular subtypes.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Xiao Liu 0041, Li Teng, Wenqi Zuo, Shixun Zhong, Yuqiao Xu, Jing Sun	Deafness gene screening based on a multilevel cascaded BPNN model.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Anand K. Keshri, Rimanpreet Kaur, Suraj S. Rawat, Naina Arora, Rajan K. Pandey, Bajarang V. Kumbhar, Amit Mishra, Shweta Tripathi, Amit Prasad	Designing and development of multi-epitope chimeric vaccine against Helicobacter pylori by exploring its entire immunogenic epitopes: an immunoinformatic approach.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	YaLing Liu, Dan Li, Yong Chen, YiJuan Liu, YiJuan Lin, XunRu Huang, Ting Wu, ChengDang Wang, Jian Ding	Integrated bioinformatics analysis for conducting a prognostic model and identifying immunotherapeutic targets in gastric cancer.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Huidong Ma, Cheng Zhong, Danyang Chen, Haofa He, Feng Yang	cnnLSV: detecting structural variants by encoding long-read alignment information and convolutional neural network.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Luca Del Core, Danilo Pellin, Ernst C. Wit, Marco Grzegorczyk	A mixed-effects stochastic model reveals clonal dominance in gene therapy safety studies.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Marta Pelizzola, Ragnhild Laursen, Asger Hobolth	Model selection and robust inference of mutational signatures using Negative Binomial non-negative matrix factorization.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Nuo Liu, Tonatiuh A. Gonzalez, Jacob Fischer, Chan Hong, Michelle Johnson, Ross Mawhorter, Fabrizia Mugnatto, Rachael Soh, Shifa Somji, Joseph S. Wirth, Ran Libeskind-Hadas, Eliot C. Bush	xenoGI 3: using the DTLOR model to reconstruct the evolution of gene families in clades of microbes.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Rongyuan Li, Jingli Wu, Gaoshi Li, Jiafei Liu, Junbo Xuan, Qi Zhu	Mdwgan-gp: data augmentation for gene expression data based on multiple discriminator WGAN-GP.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Bin Zhao, Fang Fang, Yiqun Liao, Yuji Chen, Fei Wang, Yichao Ma, Chen Wei, Jiahao Zhao, Hao Ji, Daorong Wang, Dong Tang	Novel m7G-related lncRNA signature for predicting overall survival in patients with gastric cancer.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Dario Tommasini, Brent L. Fogel	multiWGCNA: an R package for deep mining gene co-expression networks in multi-trait expression data.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Kiran Kumar Patro, Allam Jaya Prakash, Umamaheswararao Sanapala, Chaitanya Kumar Marpu, Nagwan M. Abdel Samee, Maali Alabdulhafith, Pawel Plawiak	An effective correlation-based data modeling framework for automatic diabetes prediction using machine and deep learning techniques.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	John K. L. Wong, Lena Jassowicz, Christel Herold-Mende, Martina Seiffert, Jan-Phillip Mallm, Peter Lichter, Marc Zapatka	scSNPdemux: a sensitive demultiplexing pipeline using single nucleotide polymorphisms for improved pooled single-cell RNA sequencing analysis.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Élise Maigné, Céline Noirot, Julien Henry, Yaa Adu Kesewaah, Ludovic Badin, Sébastien Déjean, Camille Guilmineau, Arielle Krebs, Fanny Mathevet, Audrey Segalini, Laurent Thomassin, David Colongo, Christine Gaspin, Laurence Liaubet, Nathalie Vialaneix	Asterics: a simple tool for the ExploRation and Integration of omiCS data.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Rishab Jain, Aditya Jain, Elizabeth Mauro, Kevin LeShane, Douglas Densmore	ICOR: improving codon optimization with recurrent neural networks.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Golam Md Mortuza, Jorge Guerrero, Shoshanna Llewellyn, Michael D. Tobiason, George D. Dickinson, William L. Hughes, Reza Zadegan, Tim Andersen	In-vitro validated methods for encoding digital data in deoxyribonucleic acid (DNA).	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Lisa Fiedler, Matthias Bernt, Martin Middendorf, Peter F. Stadler	Detecting gene breakpoints in noisy genome sequences using position-annotated colored de-Bruijn graphs.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Ping Zhang, Weicheng Sun, Dengguo Wei, Guodong Li, Jinsheng Xu, Zhuhong You, Bowei Zhao, Li Li 0057	PDA-PRGCN: identification of Piwi-interacting RNA-disease associations through subgraph projection and residual scaling-based feature augmentation.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Cong Ji, Junbin Shao	Shine: A novel strategy to extract specific, sensitive and well-conserved biomarkers from massive microbial genomic datasets.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Chun-Chi Chen, Yi-Ming Chan	REDfold: accurate RNA secondary structure prediction using residual encoder-decoder network.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Darren A. V. Scott, Ernest D. Benavente, Julian Libiseller-Egger, Dmitry V. Fedorov, Jody Phelan, Elena Ilina, Polina O. Tikhonova, Alexander Kudryavstev, Julia Galeeva, Taane G. Clark, Alex Lewin	Bayesian compositional regression with microbiome features via variational inference.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Yuya Hatano, Tomohiko Ishihara, Osamu Onodera	Accuracy of a machine learning method based on structural and locational information from AlphaFold2 for predicting the pathogenicity of TARDBP and FUS gene variants in ALS.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Hanhan Cong, Hong Liu 0013, Yi Cao, Cheng Liang, Yuehui Chen	Protein-protein interaction site prediction by model ensembling with hybrid feature and self-attention.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Suraiya Akhter, John H. Miller	BaPreS: a software tool for predicting bacteriocins using an optimal set of features.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Irene Ortega-Sanz, José Antonio Barbero-Aparicio, Antonio Canepa-Oneto, Jordi Rovira, Beatriz Melero	CamPype: an open-source workflow for automated bacterial whole-genome sequencing analysis focused on Campylobacter.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Mitja Briscik, Marie-Agnès Dillies, Sébastien Déjean	Improvement of variables interpretability in kernel PCA.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Mona Shafaghi, Zohreh Bahadori, Hamid Madanchi, Mohammad Mehdi Ranjbar, Ali Akbar Shabani, Seyed Fazlollah Mousavi	Immunoinformatics-aided design of a new multi-epitope vaccine adjuvanted with domain 4 of pneumolysin against Streptococcus pneumoniae strains.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	He Li, Lei Yang, Yuanyuan Wang, Lingchan Wang, Gang Chen, Li Zhang, Dongchang Wang	Integrative analysis of TP53 mutations in lung adenocarcinoma for immunotherapies and prognosis.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Zhiwen Lu, Lu Guo, Jianhua Chen, Rongshu Wang	Reference-based genome compression using the longest matched substrings with parallelization consideration.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido	Sctensor detects many-to-many cell-cell interactions from single cell RNA-sequencing data.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Renliang Zhang, Guanqing Jia, Xianmin Diao	geneHapR: an R package for gene haplotypic statistics and visualization.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Behrouz Bokharaeian, Mohammad Dehghani, Alberto Díaz 0001	Automatic extraction of ranked SNP-phenotype associations from text using a BERT-LSTM-based method.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Graham Alvare, Abiel Roche-Lima, Brian Fristensky	BioLegato: a programmable, object-oriented graphic user interface.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Thomas Binet, Séverine Padiolleau-Lefèvre, Stéphane Octave, Bérangère Avalle, Irene Maffucci	Comparative Study of Single-stranded Oligonucleotides Secondary Structure Prediction Tools.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Binyou Wang, Jianmin Guo, Xiaofeng Liu, Yang Yu, Jianming Wu, Yiwei Wang	Prediction of the effects of small molecules on the gut microbiome using machine learning method integrating with optimal molecular features.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Miaoshan Lu, Hengxuan Jiang, Ruimin Wang, Shaowei An, Jiawei Wang, Changbin Yu	Injectiondesign: web service of plate design with optimized stratified block randomization for modern GC/LC-MS-based sample preparation.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Zhichao Hou, Jiacheng Leng, Jiating Yu, Zheng Xia, Ling-Yun Wu	PathExpSurv: pathway expansion for explainable survival analysis and disease gene discovery.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Adrià Caballé-Mestres, Antoni Berenguer-Llergo, Camille Stephan-Otto Attolini	Roastgsa: a comparison of rotation-based scores for gene set enrichment analysis.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Ho Yin Yuen, Jesper Jansson 0001	Normalized L3-based link prediction in protein-protein interaction networks.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Mikhail Gudkov, Loïc Thibaut, Matloob Khushi, Gillian M. Blue, David S. Winlaw, Sally L. Dunwoodie, Eleni Giannoulatou	ConanVarvar: a versatile tool for the detection of large syndromic copy number variation from whole-genome sequencing data.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Sz-Wei Chu, Feng-Sheng Wang	Fuzzy optimization for identifying antiviral targets for treating SARS-CoV-2 infection in the heart.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Shuya Nakata, Yoshiharu Mori, Shigenori Tanaka	End-to-end protein-ligand complex structure generation with diffusion-based generative models.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Jérémie Scire, Jana S. Huisman, Ana Grosu, Daniel C. Angst, Adrian Lison, Jinzhou Li, Marloes H. Maathuis, Sebastian Bonhoeffer, Tanja Stadler	estimateR: an R package to estimate and monitor the effective reproductive number.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Weiwei Qian, Jian Zhou, Songtao Shou	Exploration of m6A methylation regulators as epigenetic targets for immunotherapy in advanced sepsis.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Jinghan Yang, Yuyang Xu, Minhao Yao, Gao Wang, Zhonghua Liu	ERStruct: a fast Python package for inferring the number of top principal components from whole genome sequencing data.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Chen Zhou 0004, Shuaijian Dai, Shengzhi Lai, Yuanqiao Lin, Xuechen Zhang 0002, Ning Li, Weichuan Yu	ECL 3.0: a sensitive peptide identification tool for cross-linking mass spectrometry data analysis.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Yesol Sapozhnikov, Jagdish Suresh Patel, F. Marty Ytreberg, Craig R. Miller	Statistical modeling to quantify the uncertainty of FoldX-predicted protein folding and binding stability.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Erik Huckvale, Hunter N. B. Moseley	kegg_pull: a software package for the RESTful access and pulling from the Kyoto Encyclopedia of Gene and Genomes.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Øystein Øvrebø, Miina Ojansivu, Kimmo Kartasalo, Hanna M. G. Barriga, Petter Ranefall, Margaret N. Holme, Molly M. Stevens	RegiSTORM: channel registration for multi-color stochastic optical reconstruction microscopy.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Shuwen Hu, Yi Jing, Tao Li, You-Gan Wang, Zhenyu Liu, Jing Gao 0006, Yu-Chu Tian	Inferring circadian gene regulatory relationships from gene expression data with a hybrid framework.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Pasquale Claudio Africa, Roberto Piersanti, Marco Fedele, Luca Dede', Alfio Quarteroni	lifex-fiber: an open tool for myofibers generation in cardiac computational models.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Joungmin Choi, Heejoon Chae	moBRCA-net: a breast cancer subtype classification framework based on multi-omics attention neural networks.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Georgios Argyris, Alberto Lluch-Lafuente, Mirco Tribastone, Max Tschaikowski, Andrea Vandin	Reducing Boolean networks with backward equivalence.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Lior I. Shachaf, Elijah Roberts, Patrick Cahan, Jie Xiao	Gene regulation network inference using k-nearest neighbor-based mutual information estimation: revisiting an old DREAM.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Zequn Zheng, Yongfei Song	Integrated analysis of the voltage-gated potassium channel-associated gene KCNH2 across cancers.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Elena Pianfetti, Marta Lovino, Elisa Ficarra, Loredana Martignetti	MiREx: mRNA levels prediction from gene sequence and miRNA target knowledge.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Aysam Guerler, Dannon Baker, Marius van den Beek, Björn A. Grüning, Dave Bouvier, Nate Coraor, Stephen D. Shank, Jordan D. Zehr, Michael C. Schatz, Anton Nekrutenko	Fast and accurate genome-wide predictions and structural modeling of protein-protein interactions using Galaxy.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Jingli Wu, Qinghua Nie, Gaoshi Li, Kai Zhu	Identifying driver pathways based on a parameter-free model and a partheno-genetic algorithm.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Ruowen Li, Wenjie Qu 0003, Qingqing Liu, Yilin Tan, Wenjing Zhang, Yiping Hao, Nan Jiang, Zhonghao Mao, Jinwen Ye, Jun Jiao, Qun Gao, Baoxia Cui, Taotao Dong	Development and validation of a deep learning survival model for cervical adenocarcinoma patients.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Jose Laborde, Paul A. Stewart, Zhihua Chen, Yian A. Chen, Naomi C. Brownstein	Sparse clusterability: testing for cluster structure in high dimensions.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Ali Al-Fatlawi, Eka Rusadze, Alexander Shmelkin, Negin Malekian, Cigdem Ozen, Christian Pilarsky, Michael Schroeder 0001	Netrank: network-based approach for biomarker discovery.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Brijesh Kumar Sriwastava, Anup Kumar Halder, Subhadip Basu, Tapabrata Chakraborti	RUBic: rapid unsupervised biclustering.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Ho-min Park, Jongbum Won, Yunseol Park, Esla Timothy Anzaku, Joris Vankerschaver, Arnout Van Messem, Wesley De Neve, Hyunjin Shim	CRISPR-Cas-Docker: web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Hua Zhong, Jing Luo, Lin Tang, Shicheng Liao, Zhonghao Lu, Guoliang Lin, Robert W. Murphy, Lin Liu	Association filtering and generative adversarial networks for predicting lncRNA-associated disease.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Huancheng Fu, Ce Shan, Fanchen Kang, Ling Yu, Zhonghan Li, Yike Yin	CRISPR-GRANT: a cross-platform graphical analysis tool for high-throughput CRISPR-based genome editing evaluation.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Rohan S. Mehta, Robert Petit, Timothy D. Read, Daniel B. Weissman	Detecting patterns of accessory genome coevolution in Staphylococcus aureus using data from thousands of genomes.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Tony Hauptmann, Stefan Kramer	A fair experimental comparison of neural network architectures for latent representations of multi-omics for drug response prediction.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Danyi Chen, Xiaowen Wang, Hongming Zhu, Yizhi Jiang, Yulong Li, Qi Liu, Qin Liu	Predicting anticancer synergistic drug combinations based on multi-task learning.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Yaru Hao, Xiao-Yuan Jing, Qixing Sun	Cancer survival prediction by learning comprehensive deep feature representation for multiple types of genetic data.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Hoseung Song, Wodan Ling, Ni Zhao, Anna M. Plantinga, Courtney A. Broedlow, Nichole R. Klatt, Tiffany Hensley-McBain, Michael C. Wu	Accommodating multiple potential normalizations in microbiome associations studies.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Luigi Di Biasi, Fabiola De Marco, Alessia Auriemma Citarella, Modesto Castrillón Santana, Paola Barra, Genoveffa Tortora	Refactoring and performance analysis of the main CNN architectures: using false negative rate minimization to solve the clinical images melanoma detection problem.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Yu Chen, Lixin Gao, Tianjiao Zhang	Stack-VTP: prediction of vesicle transport proteins based on stacked ensemble classifier and evolutionary information.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Anjana Senanayake, Hasindu Gamaarachchi, Damayanthi Herath, Roshan G. Ragel	DeepSelectNet: deep neural network based selective sequencing for oxford nanopore sequencing.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Irena Roterman, Katarzyna Stapor, Leszek Konieczny	Role of environmental specificity in CASP results.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Junjun Zhang, Minzhu Xie	Graph regularized non-negative matrix factorization with L2,1 norm regularization terms for drug-target interactions prediction.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Xiaoyu Yu	Genofunc: genome annotation and identification of genome features for automated pipelining analysis of virus whole genome sequences.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Junyao Kuang, Kristin Michel, Caterina M. Scoglio	GeCoNet-Tool: a software package for gene co-expression network construction and analysis.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Luísa C. de Souza, Karolayne S. Azevedo, Jackson Gomes de Souza, Raquel de M. Barbosa, Marcelo A. C. Fernandes	New proposal of viral genome representation applied in the classification of SARS-CoV-2 with deep learning.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Fotis Aisopos, Georgios Paliouras	Comparing methods for drug-gene interaction prediction on the biomedical literature knowledge graph: performance versus explainability.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Khyber Shinwari, Yurong Wu, Hafiz Muzzammel Rehman, Ningkun Xiao, Mikhail A. Bolkov, Irina A. Tuzankina, Valery Chereshnev	In-silico assessment of high-risk non-synonymous SNPs in ADAMTS3 gene associated with Hennekam syndrome and their impact on protein stability and function.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Orly Avraham, Tomer Tsaban, Ziv Ben-Aharon, Linoy Tsaban, Ora Schueler-Furman	Protein language models can capture protein quaternary state.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Iakes Goenaga, Edgar Andrés, Koldo Gojenola, Aitziber Atutxa	Advances in monolingual and crosslingual automatic disability annotation in Spanish.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Haixia Zhai, Hongli Hou, Junwei Luo, Xiaoyan Liu, Zhengjiang Wu, Junfeng Wang	DGDTA: dynamic graph attention network for predicting drug-target binding affinity.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Troy M. LaPolice, Yi-Fei Huang	An unsupervised deep learning framework for predicting human essential genes from population and functional genomic data.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Timothy R. Fallon, Tereza Calounová, Martin Mokrejs, Jing-Ke Weng, Tomás Pluskal	transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Runtian Gao, Junwei Luo, Hongyu Ding, Haixia Zhai	INSnet: a method for detecting insertions based on deep learning network.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Changlong Gu, Xiaoying Li	Prediction of disease-related miRNAs by voting with multiple classifiers.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Alexandre Renaux, Chloé Terwagne, Michael Cochez, Ilaria Tiddi, Ann Nowé, Tom Lenaerts	A knowledge graph approach to predict and interpret disease-causing gene interactions.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Nand Sharma, Joshua Millstein	CausNet: generational orderings based search for optimal Bayesian networks via dynamic programming with parent set constraints.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Joel Zirkle, Xiaomei Han, Rebecca Racz, Mohammadreza Samieegohar, Anik Chaturbedi, John Mann, Shilpa Chakravartula, Zhihua Li	Deep learning-enabled natural language processing to identify directional pharmacokinetic drug-drug interactions.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Shourun Pan, Leiming Xia, Lei Xu, Zhen Li	SubMDTA: drug target affinity prediction based on substructure extraction and multi-scale features.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Bruno Moretti, Santiago N. Rodriguez Alvarez, Hernán E. Grecco	Nfinder: automatic inference of cell neighborhood in 2D and 3D using nuclear markers.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Jin Xu	SBMLKinetics: a tool for annotation-independent classification of reaction kinetics for SBML models.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
6	Yunbin Shi, Juntao Huang, Yi Hu, Yi Shen	Multiomics data analyses to identify SLC25A17 as a novel biomarker to predict the prognosis and immune microenvironment in head and neck squamous cell carcinoma.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF