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Results
Found 16824 publication records. Showing 16824 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Diego Santoro, Leonardo Pellegrina, Matteo Comin, Fabio Vandin |
SPRISS: approximating frequent k-mers by sampling reads, and applications.  |
Bioinform.  |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Zilong Zhang, Feifei Cui, Wei Su, Lijun Dou, Anqi Xu, Chen Cao, Quan Zou 0001 |
webSCST: an interactive web application for single-cell RNA-sequencing data and spatial transcriptomic data integration. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Mitra Darvish, Enrico Seiler, Svenja Mehringer, René Rahn, Knut Reinert |
Needle: a fast and space-efficient prefilter for estimating the quantification of very large collections of expression experiments. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Justin G. Chitpin, Anuradha Surendra, Thao T. Nguyen, Graeme Taylor, Hongbin Xu, Irina Alecu, Roberto Ortega, Julianna J. Tomlinson, Angela M. Crawley, Michaeline McGuinty, Michael G. Schlossmacher, Rachel Saunders-Pullman, Miroslava Cuperlovic-Culf, Steffany A. L. Bennett, Theodore J. Perkins |
BATL: Bayesian annotations for targeted lipidomics. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Roberto Maria Pellegrino, Matteo Giulietti, Husam B. R. Alabed, Sandra Buratta, Lorena Urbanelli, Francesco Piva, Carla Emiliani |
LipidOne: user-friendly lipidomic data analysis tool for a deeper interpretation in a systems biology scenario. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yucheng Wang, Tyler J. Gorrie-Stone, Olivia A. Grant, Alexandria D. Andrayas, Xiaojun Zhai, Klaus D. McDonald-Maier, Leonard C. Schalkwyk |
InterpolatedXY: a two-step strategy to normalize DNA methylation microarray data avoiding sex bias. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Chien-Chi Lo, Migun Shakya, Ryan Connor, Karen Davenport, Mark Flynn, Adán Myers y Gutiérrez, Bin Hu, Po-E Li, Elais Player Jackson, Yan Xu, Patrick S. G. Chain |
EDGE COVID-19: a web platform to generate submission-ready genomes from SARS-CoV-2 sequencing efforts. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Dries Van Daele, Bram Weytjens, Luc De Raedt, Kathleen Marchal |
OMEN: network-based driver gene identification using mutual exclusivity. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Eran Agmon, Ryan K. Spangler, Christopher J. Skalnik, William Poole, Shayn M. Peirce, Jerry H. Morrison, Markus W. Covert |
Vivarium: an interface and engine for integrative multiscale modeling in computational biology. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | |
Correction to: Integrative data semantics through a model-enabled data stewardship. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Baptiste Kerouanton, Sebastian Schäfer, Lena Ho, Sonia Chothani, Owen J. L. Rackham |
CLIPreg: constructing translational regulatory networks from CLIP-, Ribo- and RNA-seq. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Chih-Hsuan Wei, Alexis Allot, Kevin Riehle, Aleksandar Milosavljevic, Zhiyong Lu |
tmVar 3.0: an improved variant concept recognition and normalization tool. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Léo P. M. Diaz, Michael P. H. Stumpf |
HyperGraphs.jl: representing higher-order relationships in Julia. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Richard A. Stanton, Nicholas Vlachos, Alison Laufer Halpin |
GAMMA: a tool for the rapid identification, classification and annotation of translated gene matches from sequencing data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Cecilia Noecker, Alexander Eng, Efrat Muller, Elhanan Borenstein |
MIMOSA2: a metabolic network-based tool for inferring mechanism-supported relationships in microbiome-metabolome data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher Pockrandt, Martin Steinegger, Steven L. Salzberg |
PhyloCSF++: a fast and user-friendly implementation of PhyloCSF with annotation tools. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaoli Jiao, Hiromi Imamichi, Brad T. Sherman, Rishub Nahar, Robin L. Dewar, H. Clifford Lane, Tomozumi Imamichi, Weizhong Chang |
QuasiSeq: profiling viral quasispecies via self-tuning spectral clustering with PacBio long sequencing reads. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ren Yi, Kyunghyun Cho, Richard Bonneau |
NetTIME: a multitask and base-pair resolution framework for improved transcription factor binding site prediction. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Alice Wittig, Fábio Miranda 0002, Martin Hölzer, Tom Altenburg, Jakub M. Bartoszewicz, Sebastian Beyvers, Marius A. Dieckmann, Ulrich Genske, Sven H. Giese, Melania Nowicka, Hugues Richard, Henning Schiebenhoefer, Anna-Juliane Schmachtenberg, Paul Sieben, Ming Tang, Julius Tembrockhaus, Bernhard Y. Renard, Stephan Fuchs |
CovRadar: continuously tracking and filtering SARS-CoV-2 mutations for genomic surveillance. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Hai-Long Trieu, Makoto Miwa, Sophia Ananiadou |
BioVAE: a pre-trained latent variable language model for biomedical text mining. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Hongfei Liu, Zhanerke Akhatayeva, Chuanying Pan, Mingzhi Liao, Xianyong Lan |
Comprehensive comparison of two types of algorithm for circRNA detection from short-read RNA-Seq. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Diogo A. C. Narciso, Ana Pereira, Nuno O. Dias, Luis F. Melo, Fernando Gomes Martins |
Characterization of biofilm structure and properties via processing of 2D optical coherence tomography images in BISCAP. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Célien Jacquemard, Guillaume Bret, Thomas Grutter, Esther Kellenberger |
Comparing transmembrane protein structures with ATOLL. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | |
Correction to: Efficient permutation-based genome-wide association studies for normal and skewed phenotypic distributions. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ragunathan Mariappan, Aishwarya Jayagopal, Ho Zong Sien, Vaibhav Rajan |
Neural Collective Matrix Factorization for integrated analysis of heterogeneous biomedical data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jeremie S. Kim, Can Firtina, Meryem Banu Cavlak, Damla Senol Cali, Can Alkan, Onur Mutlu |
FastRemap: a tool for quickly remapping reads between genome assemblies. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Lorenza Pacini, Claire Lesieur |
A computational methodology to diagnose sequence-variant dynamic perturbations by comparing atomic protein structures. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jiashun Xiao, Mingxuan Cai, Xianghong Hu, Xiang Wan, Gang Chen, Can Yang 0002 |
XPXP: improving polygenic prediction by cross-population and cross-phenotype analysis. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Sajal Kumar, Mingzhou Song 0001 |
Overcoming biases in causal inference of molecular interactions. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Shengji Jia, Lei Shi |
Efficient change-points detection for genomic sequences via cumulative segmented regression. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jun-Jie Zheng, Po-Wen Wang, Tzu-Wen Huang, Yao-Jong Yang, Hua-Sheng Chiu, Pavel Sumazin, Ting-Wen Chen |
MOCHI: a comprehensive cross-platform tool for amplicon-based microbiota analysis. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Andrzej Zielezinski, Sebastian Deorowicz, Adam Gudys |
PHIST: fast and accurate prediction of prokaryotic hosts from metagenomic viral sequences. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Matthew Crown, Natália Teruel, Rafael Najmanovich, Matthew Bashton |
SPEAR: Systematic ProtEin AnnotatoR. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Christian Anthon, Giulia Ilaria Corsi, Jan Gorodkin |
CRISPRon/off: CRISPR/Cas9 on- and off-target gRNA design. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Xuejian Li, Shiqiang Ma, Jin Liu, Jijun Tang, Fei Guo 0001 |
Inferring gene regulatory network via fusing gene expression image and RNA-seq data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Hongyi Duanmu, Shristi Bhattarai, Hongxiao Li, Zhan Shi, Fusheng Wang 0001, George Teodoro, Keerthi Gogineni, Preeti Subhedar, Umay Kiraz, Emiel A. M. Janssen, Ritu Aneja, Jun Kong |
A spatial attention guided deep learning system for prediction of pathological complete response using breast cancer histopathology images. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Aastha Khatiwada, Bethany J. Wolf, Ayse Selen Yilmaz, Paula S. Ramos, Maciej Pietrzak, Andrew Lawson, Kelly J. Hunt, Hang J. Kim, Dongjun Chung |
GPA-Tree: statistical approach for functional-annotation-tree-guided prioritization of GWAS results. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Philipp Wegner, Geena Mariya Jose, Vanessa Lage-Rupprecht, Sepehr Golriz Khatami, Bide Zhang, Stephan Springstubbe, Marc Jacobs 0001, Thomas Linden, Cindy Ku, Bruce Schultz, Martin Hofmann-Apitius, Alpha Tom Kodamullil |
Common data model for COVID-19 datasets. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Luca Cilibrasi, Pietro Pinoli, Anna Bernasconi 0002, Arif Canakoglu, Matteo Chiara, Stefano Ceri |
ViruClust: direct comparison of SARS-CoV-2 genomes and genetic variants in space and time. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Genaro Camele, Sebastian Menazzi, Hernán Chanfreau, Agustin Marraco, Waldo Hasperué, Matias D. Butti, Martin C. Abba |
Multiomix: a cloud-based platform to infer cancer genomic and epigenomic events associated with gene expression modulation. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yiqi Tong, Fuzhen Zhuang, Huajie Zhang, Chuyu Fang, Yu Zhao 0019, Deqing Wang, Hengshu Zhu, Bin Ni |
Improving biomedical named entity recognition by dynamic caching inter-sentence information. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Pablo Librado, Ludovic Orlando |
Struct-f4: a Rcpp package for ancestry profile and population structure inference from f4-statistics. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Felix M. Weidner, Julian D. Schwab, Silke D. Werle, Nensi Ikonomi, Ludwig Lausser, Hans A. Kestler |
Response to the letter to the editor: On the feasibility of dynamical analysis of network models of biochemical regulation. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Xingze Wang, Guoxian Yu, Jun Wang 0035, Azlan Mohd Zain, Wei Guo |
Lung cancer subtype diagnosis using weakly-paired multi-omics data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Sheila M. Gaynor, Kenneth E. Westerman, Lea L. Ackovic, Xihao Li, Zilin Li, Alisa Manning, Anthony A. Philippakis, Xihong Lin |
STAAR workflow: a cloud-based workflow for scalable and reproducible rare variant analysis. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | David A. Hughes, Kurt Taylor, Nancy McBride, Matthew A. Lee, Dan Mason, Deborah A. Lawlor, Nicholas J. Timpson, Laura J. Corbin |
metaboprep: an R package for preanalysis data description and processing. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Athanasios Baltzis, Leila Mansouri, Suzanne Jin, Björn E. Langer, Ionas Erb, Cédric Notredame |
Highly significant improvement of protein sequence alignments with AlphaFold2. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Manuel Rueda, Roberto Ariosa, Mauricio Moldes, Jordi Rambla |
Beacon v2 Reference Implementation: a toolkit to enable federated sharing of genomic and phenotypic data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Fengyuan Hu, Jia Lu, Louise S. Matheson, Manuel D. Díaz-Muñoz, Alexander Saveliev, Martin Turner |
Correction to: ORFLine: a bioinformatic pipeline to prioritize small open reading frames identifies candidate secreted small proteins from lymphocytes. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yeganeh Madadi, Jian Sun, Hao Chen 0007, Robert W. Williams, Siamak Yousefi |
Detecting retinal neural and stromal cell classes and ganglion cell subtypes based on transcriptome data with deep transfer learning. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Kelsey Chetnik, Elisa Benedetti, Daniel P. Gomari, Annalise Schweickart, Richa Batra, Mustafa Buyukozkan, Zeyu Wang, Matthias Arnold, Jonas Zierer, Karsten Suhre, Jan Krumsiek |
maplet: an extensible R toolbox for modular and reproducible metabolomics pipelines. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Weiwen Wang, Xiwen Zhang, Dao-Qing Dai |
springD2A: capturing uncertainty in disease-drug association prediction with model integration. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Junfeng Yao, Wen Sun, ZhongQuan Jian, Qingqiang Wu 0001, Xiaoli Wang |
Effective knowledge graph embeddings based on multidirectional semantics relations for polypharmacy side effects prediction. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yiqing Zhao, Matthew Brush, Chen Wang 0001, Alex H. Wagner, Hongfang Liu, Robert R. Freimuth |
Leveraging a pharmacogenomics knowledgebase to formulate a drug response phenotype terminology for genomic medicine. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Karina Pikalyova, Alexey Orlov, Arkadii I. Lin, Olga A. Tarasova, Gilles Marcou, Dragos Horvath, Vladimir Poroikov, Alexandre Varnek |
HIV-1 drug resistance profiling using amino acid sequence space cartography. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jason Yeung, Andrew L. Routh |
ViReMaShiny: an interactive application for analysis of viral recombination data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Lizhi Liu, Hiroshi Mamitsuka, Shanfeng Zhu |
HPODNets: deep graph convolutional networks for predicting human protein-phenotype associations. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Hongjie Ke, Zhao Ren, Jianfei Qi, Shuo Chen, George C. Tseng, Zhenyao Ye, Tianzhou Ma |
High-dimension to high-dimension screening for detecting genome-wide epigenetic and noncoding RNA regulators of gene expression. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Wenhuan Zeng, Anupam Gautam, Daniel H. Huson |
DeepToA: an ensemble deep-learning approach to predicting the theater of activity of a microbiome. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Masaki Tagashira, Kiyoshi Asai |
ConsAlifold: considering RNA structural alignments improves prediction accuracy of RNA consensus secondary structures. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Abbas-Ali Heydari, Oscar A. Davalos, Lihong Zhao, Katrina K. Hoyer, Suzanne S. Sindi |
ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective variational autoencoders. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Sai-Sai Guo, Jun Liu, Xiao-Gen Zhou, Gui-Jun Zhang |
DeepUMQA: ultrafast shape recognition-based protein model quality assessment using deep learning. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Cheng Zhong, Kangenbei Liao, Wei Chen 0088, Qianlong Liu, Baolin Peng, Xuanjing Huang 0001, Jiajie Peng, Zhongyu Wei |
Hierarchical reinforcement learning for automatic disease diagnosis. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jacob Neumann, Yen Ting Lin, Abhishek Mallela, Ely F. Miller, Joshua Colvin, Abell T. Duprat, Ye Chen, William S. Hlavacek, Richard G. Posner |
Implementation of a practical Markov chain Monte Carlo sampling algorithm in PyBioNetFit. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Fei Qin, Xizhi Luo, Feifei Xiao, Guoshuai Cai |
SCRIP: an accurate simulator for single-cell RNA sequencing data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Fabrizio Angaroni, Kevin Chen, Chiara Damiani, Giulio Caravagna, Alex Graudenzi, Daniele Ramazzotti |
PMCE: efficient inference of expressive models of cancer evolution with high prognostic power. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Benjamin C. Jackson |
gofasta: command-line utilities for genomic epidemiology research. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Wenhao Li, Martin P. Boer, Bart-Jan van Rossum, Chaozhi Zheng, Ronny V. L. Joosen, Fred A. van Eeuwijk |
statgenMPP: an R package implementing an IBD-based mixed model approach for QTL mapping in a wide range of multi-parent populations. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jeremy Muhlich, Yu-An Chen, Clarence Han-Wei Yapp, Douglas Russell, Sandro Santagata, Peter K. Sorger |
Stitching and registering highly multiplexed whole-slide images of tissues and tumors using ASHLAR. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Shiyu Jiang, Hemn Barzan Abdalla, Chuyun Bi, Yi Zhu, Xuechen Tian, Yixin Yang, Aloysius Wong |
HNOXPred: a web tool for the prediction of gas-sensing H-NOX proteins from amino acid sequence. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Josef Paul Kynast, Felix Schwägerl, Birte Höcker |
ATLIGATOR: editing protein interactions with an atlas-based approach. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Lukas Lange, Heike Adel, Jannik Strötgen, Dietrich Klakow |
CLIN-X: pre-trained language models and a study on cross-task transfer for concept extraction in the clinical domain. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Morgane Pierre-Jean, Florence Mauger, Jean-Francois Deleuze, Edith Le Floch |
PIntMF: Penalized Integrative Matrix Factorization method for multi-omics data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaotao Shen, Chuchu Wang, Michael P. Snyder |
massDatabase: utilities for the operation of the public compound and pathway database. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ziyi Li, Yizhuo Wang, Irene Ganan-Gomez, Simona Colla, Kim-Anh Do |
A machine learning-based method for automatically identifying novel cells in annotating single-cell RNA-seq data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Gabriel Cia, Jean Marc Kwasigroch, Marianne Rooman, Fabrizio Pucci |
SpikePro: a webserver to predict the fitness of SARS-CoV-2 variants. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Kenneth I Brewer, Glenn J. Gaffield, Malavika Puri, Ronald R. Breaker |
DIMPL: a bioinformatics pipeline for the discovery of structured noncoding RNA motifs in bacteria. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yang Xu 0047, Simon J. Baumgart, Christian M. Stegmann, Sikander Hayat |
MACA: marker-based automatic cell-type annotation for single-cell expression data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaoyan Wang, Hongduo Liu, Shuangge Ma |
GEInfo: an R package for gene-environment interaction analysis incorporating prior information. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Tyll Stöcker, Lena Altrogge, Caroline Marcon, Yan Naing Win, Frank Hochholdinger, Heiko Schoof |
MuWU: Mutant-seq library analysis and annotation. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ambuj Kumar, Pranav M. Khade, Karin S. Dorman, Robert L. Jernigan |
Coarse-graining protein structures into their dynamic communities with DCI, a dynamic community identifier. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael Nodzenski, Min Shi 0002, Juno M. Krahn, Alison S. Wise, Yuanyuan Li, Leping Li, David M. Umbach, Clarice R. Weinberg |
Erratum to: GADGETS: a genetic algorithm for detecting epistasis using nuclear families. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yi-An Chen, Rodolfo S. Allendes Osorio, Kenji Mizuguchi |
TargetMine 2022: a new vision into drug target analysis. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yun Zhang 0021, Hao Sun, Aishwarya Mandava, Brian D. Aevermann, Tobias R. Kollmann, Richard H. Scheuermann, Xing Qiu, Yu Qian |
FastMix: a versatile data integration pipeline for cell type-specific biomarker inference. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Shuxia Guo, Xuan Zhao 0004, Shengdian Jiang, Liya Ding 0001, Hanchuan Peng |
Image enhancement to leverage the 3D morphological reconstruction of single-cell neurons. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Lijuan Liu, Penghao Qian |
Manifold classification of neuron types from microscopic images. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Richard Wilton, Alexander S. Szalay |
Performance optimization in DNA short-read alignment. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yanan Wang 0003, Changyuan Hu, Terry Kwok, Christopher A. Bain, Xiangyang Xue, Robin B. Gasser, Geoffrey I. Webb, Alex Boussioutas, Xian Shen, Roger J. Daly, Jiangning Song |
DEMoS: a deep learning-based ensemble approach for predicting the molecular subtypes of gastric adenocarcinomas from histopathological images. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ke Jin, Bo Li, Hong Yan 0001, Xiao-Fei Zhang |
Imputing dropouts for single-cell RNA sequencing based on multi-objective optimization. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Youngmok Jung, Dongsu Han |
BWA-MEME: BWA-MEM emulated with a machine learning approach. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jianan Li, Keisuke Yanagisawa, Yasushi Yoshikawa, Masahito Ohue, Yutaka Akiyama |
Plasma protein binding prediction focusing on residue-level features and circularity of cyclic peptides by deep learning. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Noé Fernández-Pozo, Aureliano Bombarely |
EasyGDB: a low-maintenance and highly customizable system to develop genomics portals. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Sean M. Cascarina, Eric D. Ross |
The LCD-Composer webserver: high-specificity identification and functional analysis of low-complexity domains in proteins. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Alicja W. Nowakowska, Malgorzata Kotulska |
Topological analysis as a tool for detection of abnormalities in protein-protein interaction data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jack Kuipers, Jochen Singer, Niko Beerenwinkel |
Single-cell mutation calling and phylogenetic tree reconstruction with loss and recurrence. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Dongyuan Song, Nan Miles Xi, Jingyi Jessica Li, Lin Wang |
scSampler: fast diversity-preserving subsampling of large-scale single-cell transcriptomic data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Rick Wertenbroek, Simone Rubinacci, Ioannis Xenarios, Yann Thoma, Olivier Delaneau |
XSI - a genotype compression tool for compressive genomics in large biobanks. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Lu Pan, Huy Q. Dinh, Yudi Pawitan, Trung-Nghia Vu |
Isoform-level quantification for single-cell RNA sequencing. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
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| 1 | Lulu Chen, Chiung-Ting Wu, Chia-Hsiang Lin, Rujia Dai, Chunyu Liu 0001, Robert Clarke, Guoqiang Yu, Jennifer E. Van Eyk, David M. Herrington, Yue Wang 0021 |
swCAM: estimation of subtype-specific expressions in individual samples with unsupervised sample-wise deconvolution. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
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| 1 | Carlos Outeiral, Daniel A. Nissley, Charlotte M. Deane |
Current structure predictors are not learning the physics of protein folding. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
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