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Results
Found 16824 publication records. Showing 16824 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Julian Hecker, F. William Townes, Priyadarshini Kachroo, Cecelia A. Laurie, Jessica Lasky-Su, John Ziniti, Michael H. Cho, Scott T. Weiss, Nan M. Laird, Christoph Lange 0003 |
A unifying framework for rare variant association testing in family-based designs, including higher criticism approaches, SKATs, and burden tests.  |
Bioinform.  |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Dylan Kotliar, Andrés Colubri |
Sciviewer enables interactive visual interrogation of single-cell RNA-Seq data from the Python programming environment. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Justyna Krys, Dominik Gront |
VisuaLife: library for interactive visualization in rich web applications. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexia Giannoula, Emilio Centeno, Miguel Angel Mayer, Ferran Sanz, Laura I. Furlong |
A system-level analysis of patient disease trajectories based on clinical, phenotypic and molecular similarities. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Giuseppe Magazzù, Guido Zampieri, Claudio Angione |
Multimodal regularized linear models with flux balance analysis for mechanistic integration of omics data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jun-Yu Li, Wei-Xuan Li, An-Tai Wang, Yu Zhang 0119 |
MitoFlex: an efficient, high-performance toolkit for animal mitogenome assembly, annotation and visualization. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Pengyuan Li 0001, Xiangying Jiang, Gongbo Zhang, Juan Trelles Trabucco, Daniela Raciti, Cynthia L. Smith, Martin Ringwald, G. Elisabeta Marai, Cecilia N. Arighi, Hagit Shatkay |
Corrigendum to: Utilizing image and caption information for biomedical document classification. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexey Ovchinnikov, Isabel Cristina Pérez-Verona, Gleb Pogudin, Mirco Tribastone |
CLUE: exact maximal reduction of kinetic models by constrained lumping of differential equations. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Dhong-Gun Won, Dong-Wook Kim, Junwoo Woo, Kyoungyeul Lee |
3Cnet: pathogenicity prediction of human variants using multitask learning with evolutionary constraints. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Frédéric Bertrand, Ismaïl Aouadi, Nicolas Jung, Raphael Carapito, Laurent Vallat, Seiamak Bahram, Myriam Maumy-Bertrand |
selectBoost: a general algorithm to enhance the performance of variable selection methods. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ailin Ren, Dachuan Zhang, Yu Tian 0006, Pengli Cai, Tong Zhang, Qian-Nan Hu |
Transcriptor: a comprehensive platform for annotation of the enzymatic functions of transcripts. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Zhiqiang Zhang, Yuhao Dan, Yaochen Xu, Jiarui Zhang, Xiaoqi Zheng, Jiantao Shi |
The DNA methylation haplotype (mHap) format and mHapTools. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ruby Sharma, Sajal Kumar, Mingzhou Song 0001 |
Fundamental gene network rewiring at the second order within and across mammalian systems. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jiayu Shang, Jingzhe Jiang, Yanni Sun |
Bacteriophage classification for assembled contigs using graph convolutional network. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ales Varabyou, Geo Pertea, Christopher Pockrandt, Mihaela Pertea |
TieBrush: an efficient method for aggregating and summarizing mapped reads across large datasets. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Simone Ciccolella, Giulia Bernardini 0001, Luca Denti, Paola Bonizzoni, Marco Previtali, Gianluca Della Vedova |
Triplet-based similarity score for fully multilabeled trees with poly-occurring labels. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Maxime Delmas, Olivier Filangi, Nils Paulhe, Florence Vinson, Christophe Duperier, William Garrier, Paul-Emeric Saunier, Yoann Pitarch, Fabien Jourdan, Franck Giacomoni, Clément Frainay |
FORUM: building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alberto Zenere, Olof Rundquist, Mika Gustafsson, Claudio Altafini |
Using high-throughput multi-omics data to investigate structural balance in elementary gene regulatory network motifs. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Gabriel J. Kowalczyk, J. Agustin Cruz, Yue Guo, Qiuhong Zhang, Natalie Sauerwald, Robin E. C. Lee |
dNEMO: a tool for quantification of mRNA and punctate structures in time-lapse images of single cells. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | José Ramón Macías, Rubén Sánchez García, Pablo Conesa, Erney Ramírez-Aportela, Marta Martínez, Carlos Wert-Carvajal, Alberto M. Parra-Perez, Joan Segura Mora, Sam Horrell, Andrea Thorn, Carlos Oscar Sánchez Sorzano, José María Carazo |
3DBionotes COVID-19 edition. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Gabriel Landini, Giovanni Martinelli, Filippo Piccinini |
Colour deconvolution: stain unmixing in histological imaging. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Taher Mun, Nae-Chyun Chen, Ben Langmead |
LevioSAM: fast lift-over of variant-aware reference alignments. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Arnaud M. Wolfer, Gonçalo D. S. Correia, Caroline J. Sands, Stephane Camuzeaux, Ada H. Y. Yuen, Elena Chekmeneva, Zoltan Takats, Jake T. M. Pearce, Matthew R. Lewis |
peakPantheR, an R package for large-scale targeted extraction and integration of annotated metabolic features in LC-MS profiling datasets. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Adrian C. D. Fuchs, Vikram Alva, Andrei N. Lupas |
An astonishing wealth of new proteasome homologs. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Dimitris V. Manatakis, Aaron Vandevender, Elias S. Manolakos |
Erratum to: An information-theoretic approach for measuring the distance of organ tissue samples using their transcriptomic signatures. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Tianzhong Yang, Peng Wei 0005, Wei Pan |
Integrative analysis of multi-omics data for discovering low-frequency variants associated with low-density lipoprotein cholesterol levels. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Vu Viet Hoang Pham, Lin Liu 0003, Cameron Bracken, Thin Nguyen, Gregory J. Goodall, Jiuyong Li, Thuc Duy Le |
pDriver: a novel method for unravelling personalized coding and miRNA cancer drivers. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ling Luo 0001, Shankai Yan, Po-Ting Lai, Daniel Veltri, Andrew J. Oler, Sandhya Xirasagar, Rajarshi Ghosh, Morgan Similuk, Peter N. Robinson, Zhiyong Lu |
PhenoTagger: a hybrid method for phenotype concept recognition using human phenotype ontology. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Po-E Li, Adán Myers y Gutiérrez, Karen Davenport, Mark Flynn, Bin Hu, Chien-Chi Lo, Elais Player Jackson, Migun Shakya, Yan Xu, Jason D. Gans, Patrick S. G. Chain |
A public website for the automated assessment and validation of SARS-CoV-2 diagnostic PCR assays. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Frédéric Mahé, Lucas Czech, Alexandros Stamatakis, Christopher Quince, Colomban de Vargas, Micah Dunthorn, Torbjørn Rognes |
Swarm v3: towards tera-scale amplicon clustering. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Paula A. Marin Zapata, Sina Roth, Dirk Schmutzler, Thomas Wolf, Erica Manesso, Djork-Arné Clevert |
Self-supervised feature extraction from image time series in plant phenotyping using triplet networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Maidi Liu, Yanqing Ye, Jiang Jiang 0001, Kewei Yang 0001 |
MANIEA: a microbial association network inference method based on improved Eclat association rule mining algorithm. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Aaron Graubert, François Aguet, Arvind Ravi, Kristin G. Ardlie, Gad Getz |
RNA-SeQC 2: efficient RNA-seq quality control and quantification for large cohorts. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Meng Wang 0007, Lihua Jiang, Michael P. Snyder |
AdaTiSS: a novel data-Adaptive robust method for identifying Tissue Specificity Scores. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Leszek P. Pryszcz, Eva Maria Novoa |
ModPhred: an integrative toolkit for the analysis and storage of nanopore sequencing DNA and RNA modification data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Vasundra Touré, Steven Vercruysse, Marcio Luis Acencio, Ruth C. Lovering, Sandra E. Orchard, Glyn Bradley, Cristina Casals-Casas, Claudine Chaouiya, Noemi del-Toro, Åsmund Flobak, Pascale Gaudet, Henning Hermjakob, Charles Tapley Hoyt, Luana Licata, Astrid Lægreid, Christopher J. Mungall, Anne Niknejad, Simona Panni, Livia Perfetto, Pablo Porras, Dexter Pratt, Julio Saez-Rodriguez, Denis Thieffry, Paul D. Thomas, Dénes Türei, Martin Kuiper |
The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST). |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Benjamin Hsu, Valeriia Sherina, Matthew N. McCall |
Autoregressive modeling and diagnostics for qPCR amplification. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Isabelle Bichindaritz, Guanghui Liu 0003, Christopher L. Bartlett |
Integrative survival analysis of breast cancer with gene expression and DNA methylation data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Sara Hetzel, Pay Giesselmann, Knut Reinert, Alexander Meissner, Helene Kretzmer |
RLM: fast and simplified extraction of read-level methylation metrics from bisulfite sequencing data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Juho Timonen, Henrik Mannerström, Aki Vehtari, Harri Lähdesmäki |
lgpr: an interpretable non-parametric method for inferring covariate effects from longitudinal data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaohua Douglas Zhang, Dandan Wang, Shixue Sun, Heping Zhang |
Issues of Z-factor and an approach to avoid them for quality control in high-throughput screening studies. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Zeyuan Zuo, Liu Cao, Louis-Félix Nothias, Hosein Mohimani |
MS2Planner: improved fragmentation spectra coverage in untargeted mass spectrometry by iterative optimized data acquisition. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Weibing Wang, Lin Gao 0006, Yusen Ye, Yong Gao 0001 |
CCIP: predicting CTCF-mediated chromatin loops with transitivity. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ming Tang, Yasin Kaymaz, Brandon L. Logeman, Stephen Eichhorn, Zhengzheng S. Liang, Catherine Dulac, Timothy B. Sackton |
Evaluating single-cell cluster stability using the Jaccard similarity index. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alma Andersson, Joakim Lundeberg |
sepal: identifying transcript profiles with spatial patterns by diffusion-based modeling. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jun-Liang Lin, Tsung-Ting Hsieh, Yi-An Tung, Xuan-Jun Chen, Yu-Chun Hsiao, Chia-Lin Yang, Tyng-Luh Liu, Chien-Yu Chen 0001 |
ezGeno: an automatic model selection package for genomic data analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ksenia Lavrichenko, Øyvind Helgeland, Pål R. Njølstad, Inge Jonassen, Stefan Johansson |
SeeCiTe: a method to assess CNV calls from SNP arrays using trio data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexander P. Wu, Jian Peng 0001, Bonnie Berger, Hyunghoon Cho |
Bayesian information sharing enhances detection of regulatory associations in rare cell types. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jun Yan, Zhongsong Man, Lu Gao, Lei Cai, Qian Lu, Jiahong Dong |
The role of CpG island methylator phenotype in the clinical course of hepatocellular carcinoma. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Woosub Shin, Joseph L. Hellerstein |
Isolating structural errors in reaction networks in systems biology. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Chen Wang, Daniel M. Konecki, David C. Marciano, Harikumar Govindarajan, Amanda M. Williams, Brigitta Wastuwidyaningtyas, Thomas Bourquard, Panagiotis Katsonis, Olivier Lichtarge |
Identification of evolutionarily stable functional and immunogenic sites across the SARS-CoV-2 proteome and greater coronavirus family. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Chi Song, Shih-Chi Su, Zhiguang Huo, Suleyman Vural, James E. Galvin, Lun-Ching Chang |
HCMMCNVs: hierarchical clustering mixture model of copy number variants detection using whole exome sequencing technology. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Daiyun Huang, Bowen Song, Jingjue Wei, Jionglong Su, Frans Coenen, Jia Meng |
Weakly supervised learning of RNA modifications from low-resolution epitranscriptome data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Stephen Todd, Peter Todd, Simon J. McGowan, James R. Hughes, Yasutaka Kakui, Frederic Fol Leymarie, William H. Latham, Stephen Taylor |
CSynth: an interactive modelling and visualization tool for 3D chromatin structure. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Anja C. Gumpinger, Bastian Rieck, Dominik G. Grimm, Karsten M. Borgwardt |
Network-guided search for genetic heterogeneity between gene pairs. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Joel Dokmegang, Hanh Nguyen, Elena Kardash, Thierry Savy, Matteo Cavaliere, Nadine Peyriéras, René Doursat |
Quantification of cell behaviors and computational modeling show that cell directional behaviors drive zebrafish pectoral fin morphogenesis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | David Sundell, Caroline Öhrman, Daniel Svensson, Edvin Karlsson, Björn Brindefalk, Kerstin Myrtennäs, Jon Ahlinder, Markus H. Antwerpen, Mathias C. Walter, Mats Forsman, Per Stenberg, Andreas Sjödin |
FlexTaxD: flexible modification of taxonomy databases for improved sequence classification. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Liya Wang, Zhenyuan Lu, Michael Regulski, Yinping Jiao, Junping Chen, Doreen Ware, Zhanguo Xin |
BSAseq: an interactive and integrated web-based workflow for identification of causal mutations in bulked F2 populations. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Chengqian Lu, Min Zeng, Fang-Xiang Wu, Min Li 0007, Jianxin Wang 0001 |
Improving circRNA-disease association prediction by sequence and ontology representations with convolutional and recurrent neural networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Nick Strayer, Jana K. Shirey-Rice, Yu Shyr, Joshua C. Denny, Jill M. Pulley, Yaomin Xu |
PheWAS-ME: a web-app for interactive exploration of multimorbidity patterns in PheWAS. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Simone Ciccolella, Camir Ricketts, Mauricio Soto Gomez, Murray Patterson, Dana Silverbush, Paola Bonizzoni, Iman Hajirasouliha, Gianluca Della Vedova |
Inferring cancer progression from Single-Cell Sequencing while allowing mutation losses. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alain J. Mbebi, Hao Tong, Zoran Nikoloski |
L2, 1-norm regularized multivariate regression model with applications to genomic prediction. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Silvia Benevenuta, Emidio Capriotti, Piero Fariselli |
Calibrating variant-scoring methods for clinical decision making. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Anna Abramova, Adriana Osinska, Haveela Kunche, Emil Burman, Johan Bengtsson-Palme |
CAFE: a software suite for analysis of paired-sample transposon insertion sequencing data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Callum Arthurs, Aamir Ahmed |
QuArray: an application for tissue array whole slide image export and signal analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Runbin Tang, Zuguo Yu, Yuanlin Ma, Yaoqun Wu, Yi-Ping Phoebe Chen, Limsoon Wong, Jinyan Li 0001 |
Genetic source completeness of HIV-1 circulating recombinant forms (CRFs) predicted by multi-label learning. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yi Liu 0058, Benjamin L. Elsworth, Pau Erola, Valeriia Haberland, Gibran Hemani, Matt Lyon, Jie Zheng 0006, Oliver Lloyd, Marina Vabistsevits, Tom R. Gaunt |
EpiGraphDB: a database and data mining platform for health data science. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Tong Zhang, Shao-Wu Zhang, Yan Li |
Identifying driver genes for individual patients through inductive matrix completion. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Anastasiya Belyaeva, Chandler Squires, Caroline Uhler |
DCI: learning causal differences between gene regulatory networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Garrett Winkelmaier, Bahram Parvin |
An enhanced loss function simplifies the deep learning model for characterizing the 3D organoid models. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alona Levy-Jurgenson, Xavier Tekpli, Zohar Yakhini |
Assessing heterogeneity in spatial data using the HTA index with applications to spatial transcriptomics and imaging. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Rui Fan, Qinghua Cui |
Toward comprehensive functional analysis of gene lists weighted by gene essentiality scores. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jun Chen, Xianyang Zhang |
D-MANOVA: fast distance-based multivariate analysis of variance for large-scale microbiome association studies. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Almut Heinken, Stefanía Magnúsdóttir, Ronan M. T. Fleming, Ines Thiele |
DEMETER: efficient simultaneous curation of genome-scale reconstructions guided by experimental data and refined gene annotations. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ting Jin, Nam D. Nguyen, Flaminia Talos, Daifeng Wang |
ECMarker: interpretable machine learning model identifies gene expression biomarkers predicting clinical outcomes and reveals molecular mechanisms of human disease in early stages. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Da Kuang, Jochen Weile, Nishka Kishore, Maria Nguyen, Alan F. Rubin, Stanley Fields, Douglas M. Fowler, Frederick P. Roth |
MaveRegistry: a collaboration platform for multiplexed assays of variant effect. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jingwen Guo, David Starr, Huazhang Guo |
Classification and review of free PCR primer design software. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Byunghan Lee, Hyeyoung Min, Sungroh Yoon |
MUGAN: multi-GPU accelerated AmpliconNoise server for rapid microbial diversity assessment. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jordan H. Creed, Christopher M. Wilson, Alex C. Soupir, Christelle M. Colin-Leitzinger, Gregory J. Kimmel, Oscar E. Ospina, Nicholas H. Chakiryan, Joseph Markowitz, Lauren C. Peres, Anna Coghill, Brooke L. Fridley |
spatialTIME and iTIME: R package and Shiny application for visualization and analysis of immunofluorescence data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Pavel Beran, Dagmar Stehlíková, Stephen P. Cohen, Vladislav Curn |
KEC: unique sequence search by K-mer exclusion. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Fengyuan Hu, Jia Lu, Louise S. Matheson, Manuel D. Díaz-Muñoz, Alexander Saveliev, Jinbo Xu, Martin Turner |
ORFLine: a bioinformatic pipeline to prioritize small open reading frames identifies candidate secreted small proteins from lymphocytes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Bruck Taddese, Antoine Garnier, Madeline Deniaud, Daniel Henrion, Marie Chabbert |
Bios2cor: an R package integrating dynamic and evolutionary correlations to identify functionally important residues in proteins. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Christopher Jürges, Lars Dölken, Florian Erhard |
Integrative transcription start site identification with iTiSS. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jianxiong Tang, Jianxiao Zou, Mei Fan, Qi Tian, Jiyang Zhang, Shicai Fan |
CaMelia: imputation in single-cell methylomes based on local similarities between cells. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Qiwei Li 0001, Minzhe Zhang, Yang Xie, Guanghua Xiao |
Bayesian modeling of spatial molecular profiling data via Gaussian process. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Qingjie Zhu, Yi Shao, Zhicheng Wang, Xingjun Chen, Chunqiong Li, Zihan Liang, Mingyue Jia, Qingchun Guo, Hu Zhao, Lei Kong, Li Zhang 0112 |
DeepS: a web server for image optical sectioning and super resolution microscopy based on a deep learning framework. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Tristan Mary-Huard, Sarmistha Das, Indranil Mukhopadhyay, Stéphane Robin |
Querying multiple sets of P-values through composed hypothesis testing. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Loane Danès, Nicolas Tchitchek, Christophe Bécavin |
Bacnet: a user-friendly platform for building multi-omics websites. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Maryam Rabiee, Siavash Mirarab |
SODA: multi-locus species delimitation using quartet frequencies. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Dan Shao, Lan Huang 0002, Yan Wang 0028, Kai He, Xueteng Cui, Yao Wang, Qin Ma 0003, Juan Cui |
DeepSec: a deep learning framework for secreted protein discovery in human body fluids. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yassene Mohammed, Pallab Bhowmick, Sarah A. Michaud, Albert Sickmann, Christoph H. Borchers |
Mouse Quantitative Proteomics Knowledgebase: reference protein concentration ranges in 20 mouse tissues using 5000 quantitative proteomics assays. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Raktim Mitra, Adam L. Maclean |
RVAgene: generative modeling of gene expression time series data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Kevin A. Murgas, Yanlin Ma, Lidea K. Shahidi, Sayan Mukherjee 0001, Andrew S. Allen, Darryl Shibata, Marc D. Ryser |
A Bayesian hierarchical model to estimate DNA methylation conservation in colorectal tumors. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael Aichem, Tobias Czauderna, Yan Zhu 0006, Jinxin Zhao, Matthias Klapperstück, Karsten Klein 0001, Jian Li 0052, Falk Schreiber |
Visual exploration of large metabolic models. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Victor Rossier, Alex Warwick Vesztrocy, Marc Robinson-Rechavi, Christophe Dessimoz |
OMAmer: tree-driven and alignment-free protein assignment to subfamilies outperforms closest sequence approaches. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ting Wei, Jinfu J. Nie, Nicholas B. Larson, Zhenqing Ye, Jeanette E. Eckel-Passow, Keith D. Robertson, Jean-Pierre A. Kocher, Liguo Wang 0002 |
CpGtools: a python package for DNA methylation analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Xu Shi, Andrew F. Neuwald, Xiao Wang 0031, Tian-Li Wang, Leena Hilakivi-Clarke, Robert Clarke, Jianhua Xuan |
IntAPT: integrated assembly of phenotype-specific transcripts from multiple RNA-seq profiles. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Jiaxuan Wangwu, Zexuan Sun, Zhixiang Lin |
scAMACE: model-based approach to the joint analysis of single-cell data on chromatin accessibility, gene expression and methylation. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Rafael Peres da Silva, Chayaporn Suphavilai, Niranjan Nagarajan |
TUGDA: task uncertainty guided domain adaptation for robust generalization of cancer drug response prediction from in vitro to in vivo settings. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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| 1 | Guangyu Yang, Leslie Cope, Zitong He, Liliana Florea |
Jutils: a visualization toolkit for differential alternative splicing events. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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