Search results for "DNA-computing"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
39	Germano Resconi	Morphic Computing.	New Directions in Intelligent Interactive Multimedia	2008	DBLP DOI BibTeX RDF	Morphic Computing, Morphogenetic Computing, Morphic Fields, Morphogenetic Fields, Morphic Systems, Morphic Network, Morphic System of Systems, Quantum Computing, Soft Computing, DNA Computing, Computing with Words
39	Ji Youn Lee, Hee-Woong Lim, Suk-In Yoo, Byoung-Tak Zhang, Tai Hyun Park	Efficient Initial Pool Generation for Weighted Graph Problems Using Parallel Overlap Assembly.	DNA	2004	DBLP DOI BibTeX RDF
39	Miki Hirabayashi, Hirotada Ohashi, Tai Kubo	Experimental Validation of the Transcription-Based Diagnostic Automata with Quantitative Control by Programmed Molecules.	DNA	2007	DBLP DOI BibTeX RDF	nucleic acid detection systems, molecular programming, autonomous diagnostic devices, molecular circuits, DNA computing, Biomolecular computing
39	Masahito Yamamoto, Satoshi Kashiwamura, Azuma Ohuchi	DNA Memory with 16.8M Addresses.	DNA	2007	DBLP DOI BibTeX RDF	DNA memory, NPMM, Theoretical capacity, DNA Computing
39	Marc García-Arnau, Daniel Manrique, Alfonso Rodríguez-Patón, Petr Sosík	Towards a Robust Biocomputing Solution of Intractable Problems.	DNA	2007	DBLP DOI BibTeX RDF	Incremental Strategy, DNA Computing, NP-Complete problem, Membrane Computing, Maximum Clique Problem
39	Vinhthuy T. Phan, Max H. Garzon	On codeword design in metric DNA spaces.	Nat. Comput.	2009	DBLP DOI BibTeX RDF	Data coding in DNA, Metric DNA space, Codeword design, h-Distance, Maximal codes, DNA hybridization, Gibbs energy
39	Zhixiang Yin, Jianzhong Cui, Jin Yang, Jin Xu	DNA Computing Model of the Integer Linear Programming Problem Based on Molecular Beacon.	ICIC (3)	2006	DBLP DOI BibTeX RDF
38	Rohani Binti Abu Bakar, Junzo Watada	Evidential Reasoning Based on DNA Computation.	KES (2)	2009	DBLP DOI BibTeX RDF	Reasoning, DNA computing, Belief function, Evidential reasoning, Plausibility
37	Allen P. Mills Jr., M. Turberfield, Andrew J. Turberfield, Bernard Yurke, Philip M. Platzman	Experimental aspects of DNA neural network computation.	Soft Comput.	2001	DBLP DOI BibTeX RDF
37	Oh Hyuk Kwon, Kyu-Yeul Wang, Ji Yoon Kim, Jeahyun Park, Duck-Jin Chung, Chong Ho Lee	DNA Inspired Digital Signal Pattern Matching Algorithm.	FBIT	2007	DBLP DOI BibTeX RDF
37	Jun Chen, Wei Liu, Yuli Gao, Shouxia Sun	Fluorescence Model of 3-SAT in DNA Computing.	ICIC (3)	2007	DBLP DOI BibTeX RDF	Trichotomy Strategy, Fluorescein-labeled, Parallel, SAT
37	Evgeny Dantsin, Alexander Wolpert	Solving Constraint Satisfaction Problems with DNA Computing.	COCOON	2002	DBLP DOI BibTeX RDF
37	Jan J. Mulawka, Piotr Wasiewicz, Katarzyna Pietak	Virus-Enhanced Genetic Algorithms Inspired by DNA Computing.	ISMIS	1999	DBLP DOI BibTeX RDF
37	Joseph Ibershoff, Jerzy W. Jaromczyk, Danny van Noort	Simulations of Microreactors: The Order of Things.	DNA	2006	DBLP DOI BibTeX RDF
37	Giuditta Franco, Vincenzo Manca, Cinzia Giagulli, Carlo Laudanna	DNA Recombination by XPCR.	DNA	2005	DBLP DOI BibTeX RDF	XPCR, generation of DNA initial pool, SAT, PCR
36	Jian-Qin Liu, Katsunori Shimohara	Biomolecular Computing by Encoding of Regulated Phosphorylation-Dephosphorylation and Logic of Kinase-Phosphatase in Cells.	DNA	2003	DBLP DOI BibTeX RDF
36	Gheorghe Paun	(DNA) computing by carving.	Soft Comput.	1999	DBLP DOI BibTeX RDF	Chomskyhierarchy, approximation of languages, DNA computing, complementation
36	Joseph Ibershoff, Jerzy W. Jaromczyk, Danny van Noort	Making the SAT decision Based on a DNA Computation.	IEEE Congress on Evolutionary Computation	2007	DBLP DOI BibTeX RDF
35	Angela M. Pagano, Susannah Gal	An Approach for Using Modified Nucleotides in Aqueous DNA Computing.	DNA	2007	DBLP DOI BibTeX RDF
35	Don Jyh-Fu Jeng, Junzo Watada, Berlin Wu, Jui-Yu Wu	Fuzzy Forecasting with DNA Computing.	DNA	2006	DBLP DOI BibTeX RDF
35	Rohani Binti Abu Bakar, Junzo Watada	A Bio-soft Computing Approach to Re-arrange a Flexible Manufacturing Robot.	KES (3)	2007	DBLP DOI BibTeX RDF	automated manufacturing, manufacturing, DNA computing, flexible manufacturing, robot cell
35	Lucas Ledesma, Daniel Manrique, Alfonso Rodríguez-Patón	A tissue P system and a DNA microfluidic device for solving the shortest common superstring problem.	Soft Comput.	2005	DBLP DOI BibTeX RDF	Microflow reactor, Shortest common superstring problem, DNA computing, Membrane computing
35	Giuditta Franco	A Polymerase Based Algorithm for SAT.	ICTCS	2005	DBLP DOI BibTeX RDF	Polymerase, Restriction Enzymes, XPCR, SAT, DNA Computing
35	Hong Bi, Junghuei Chen, Russell J. Deaton, Max H. Garzon, Harvey Rubin, David Harlan Wood	In vitro selection of non-crosshybridizing oligonucleotides for computation.	Nat. Comput.	2003	DBLP DOI BibTeX RDF	word design, DNA computing
35	Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Petra Schuurman, Gerhard J. Woeginger	DNA Sequencing, Eulerian Graphs, and the Exact Perfect Matching Problem.	WG	2002	DBLP DOI BibTeX RDF	computational complexity, graph theory, computational biology, DNA computing, DNA sequencing
35	Yasubumi Sakakibara, Satoshi Kobayashi	Sticker systems with complex structures.	Soft Comput.	2001	DBLP DOI BibTeX RDF	Sticker system, DNA computing, Self-assembly, Secondary structure
35	Danny van Noort, Laura F. Landweber	Towards a Re-programmable DNA Computer.	DNA	2003	DBLP DOI BibTeX RDF
35	Muhammad Faiz Mohamed Saaid, Zuwairie Ibrahim, Nor Haniza Sarmin	An Improved In Silico Algorithm for Output Visualization of DNA Computing Based on Real-Time PCR.	Asia International Conference on Modelling and Simulation	2008	DBLP DOI BibTeX RDF	real-time PCR, TaqMan probes, DNA Computing
34	Xiangrong Liu, Wenbin Liu, Juan Liu 0003, Linqiang Pan, Jin Xu	Predicting Melting Temperature (Tm) of DNA Duplex Based on Neural Network.	ICIC (3)	2006	DBLP DOI BibTeX RDF
34	Jacek Blazewicz, Piotr Formanowicz, Radoslaw Urbaniak	DNA Based Algorithms for Some Scheduling Problems.	EvoWorkshops	2003	DBLP DOI BibTeX RDF
34	Lila Kari, Mark Daley, Greg Gloor, Rani Siromoney, Laura F. Landweber	How to Compute with DNA.	FSTTCS	1999	DBLP DOI BibTeX RDF
34	Zheng Zhang, Jin Xu, Jie Liu, Linqiang Pan	Programmable Pushdown Store Base on DNA Computing.	ICIC (3)	2006	DBLP DOI BibTeX RDF
34	Zhixiang Yin, Jianzhong Cui, Jing Yang 0037, Guangwu Liu	DNA Computing Model of Graph Isomorphism Based on Three Dimensional DNA Graph Structures.	ICIC (2)	2005	DBLP DOI BibTeX RDF
34	Shankara Narayanan Krishna, Raghavan Rama 0001	Insertion-Deletion P Systems.	DNA	2001	DBLP DOI BibTeX RDF
34	Andrzej Ehrenfeucht, Tero Harju, Ion Petre, Grzegorz Rozenberg	Patterns of Micronuclear Genes in ciliates.	DNA	2001	DBLP DOI BibTeX RDF
33	Aili Han, Daming Zhu	A New DNA Encoding Method for Traveling Salesman Problem.	ICIC (3)	2006	DBLP DOI BibTeX RDF
33	Lila Kari, Stavros Konstantinidis, Petr Sosík, Gabriel Thierrin	On Hairpin-Free Words and Languages.	Developments in Language Theory	2005	DBLP DOI BibTeX RDF
33	In-Hee Lee, Sun Kim, Byoung-Tak Zhang	Multi-objective Evolutionary Probe Design Based on Thermodynamic Criteria for HPV Detection.	PRICAI	2004	DBLP DOI BibTeX RDF
33	Sun-Wook Choi, Chong Ho Lee	DNA Computing Hardware Design and Application to Multiclass Cancer Data.	ICONIP (2)	2008	DBLP DOI BibTeX RDF
32	Petr Sosík, Alfonso Rodríguez-Patón	P Systems with Active Membranes Characterize PSPACE.	DNA	2006	DBLP DOI BibTeX RDF
32	Maurice Margenstern, Carlos Martín-Vide, Gheorghe Paun	Computing with Membranes: Variants with an Enhanced Membrane Handling.	DNA	2001	DBLP DOI BibTeX RDF
32	Ashish Goel, Friedrich C. Simmel, Petr Sosík (eds.)	DNA Computing, 14th International Meeting on DNA Computing, DNA 14, Prague, Czech Republic, June 2-9, 2008. Revised Selected Papers	DNA	2009	DBLP DOI BibTeX RDF
32	John H. Reif, Urmi Majumder	Isothermal Reactivating Whiplash PCR for Locally Programmable Molecular Computation.	DNA	2008	DBLP DOI BibTeX RDF
32	Sean Williams, Kyle Lund, Chenxiang Lin, Peter Wonka, Stuart Lindsay, Hao Yan	Tiamat: A Three-Dimensional Editing Tool for Complex DNA Structures.	DNA	2008	DBLP DOI BibTeX RDF	Structural DNA nanotechnology, DNA tile, 3D DNA structure display, DNA sequence design
32	Oscar H. Ibarra, Andrei Paun, Alfonso Rodríguez-Patón	Sequentiality Induced by Spike Number in SNP Systems.	DNA	2008	DBLP DOI BibTeX RDF
32	Suguru Kawashimo, Yen Kaow Ng, Hirotaka Ono 0001, Kunihiko Sadakane, Masafumi Yamashita	Speeding Up Local-Search Type Algorithms for Designing DNA Sequences under Thermodynamical Constraints.	DNA	2008	DBLP DOI BibTeX RDF	Statistical Thermodynamical Constraints, Local Search, DNA Sequence Design
32	Fumiaki Tanaka, Takashi Tsuda, Masami Hagiya	Towards DNA Comparator: The Machine That Compares DNA Concentrations.	DNA	2008	DBLP DOI BibTeX RDF
32	Stanislav Angelov, Sanjeev Khanna, Mirkó Visontai	Robust Self-assembly of Graphs.	DNA	2008	DBLP DOI BibTeX RDF
32	Yusuke Nakagawa, Katsuyuki Yugi, Kenji Tsuge, Mitsuhiro Itaya, Hiroshi Yanagawa, Yasubumi Sakakibara	Operon Structure Optimization by Random Self-assembly.	DNA	2008	DBLP DOI BibTeX RDF
32	Chris Luhrs	Polyomino-Safe DNA Self-assembly via Block Replacement.	DNA	2008	DBLP DOI BibTeX RDF
32	Lulu Qian, Erik Winfree	A Simple DNA Gate Motif for Synthesizing Large-Scale Circuits.	DNA	2008	DBLP DOI BibTeX RDF
32	Yuriy Brun, Dustin Reishus	Connecting the Dots: Molecular Machinery for Distributed Robotics.	DNA	2008	DBLP DOI BibTeX RDF
32	Florent Becker, Eric Rémila, Nicolas Schabanel	Time Optimal Self-assembly for 2D and 3D Shapes: The Case of Squares and Cubes.	DNA	2008	DBLP DOI BibTeX RDF	Time Optimal Construction, 2D and 3D Discrete Geometry, Tilings, Self-assembling
32	Xingguo Liang, Hidenori Nishioka, Nobutaka Takenaka, Hiroyuki Asanuma	Construction of Photon-Fueled DNA Nanomachines by Tethering Azobenzenes as Engines.	DNA	2008	DBLP DOI BibTeX RDF	DNA nanomachine, azobenzene, photoregulation, hybridization
32	David Soloveichik, Georg Seelig, Erik Winfree	DNA as a Universal Substrate for Chemical Kinetics.	DNA	2008	DBLP DOI BibTeX RDF
32	Matthew J. Patitz, Scott M. Summers	Self-assembly of Discrete Self-similar Fractals.	DNA	2008	DBLP DOI BibTeX RDF
32	Claudio Ferretti, Giancarlo Mauri, Claudio Zandron (eds.)	DNA Computing, 10th International Workshop on DNA Computing, DNA 10, Milan, Italy, June 7-10, 2004, Revised Selected Papers	DNA	2005	DBLP DOI BibTeX RDF
32	Mitsuhiro Kubota, Masami Hagiya	Minimum Basin Algorithm: An Effective Analysis Technique for DNA Energy Landscapes.	DNA	2004	DBLP DOI BibTeX RDF
32	David Soloveichik, Erik Winfree	Complexity of Self-assembled Shapes.	DNA	2004	DBLP DOI BibTeX RDF
32	Tero Harju, Maurice Margenstern	Splicing Systems for Universal Turing Machines.	DNA	2004	DBLP DOI BibTeX RDF
32	Artiom Alhazov, Matteo Cavaliere	Computing by Observing Bio-systems: The Case of Sticker Systems.	DNA	2004	DBLP DOI BibTeX RDF
32	Tero Harju, Chang Li, Ion Petre, Grzegorz Rozenberg	Parallelism in Gene Assembly.	DNA	2004	DBLP DOI BibTeX RDF
32	Bernard Yurke, David Y. Zhang	A Clocked DNA-Based Replicator.	DNA	2004	DBLP DOI BibTeX RDF
32	Matteo Cavaliere, Natasa Jonoska, Sivan Yogev, Ron Piran, Ehud Keinan, Nadrian C. Seeman	Biomolecular Implementation of Computing Devices with Unbounded Memory.	DNA	2004	DBLP DOI BibTeX RDF
32	Clint Morgan, Darko Stefanovic, Cristopher Moore, Milan N. Stojanovic	Building the Components for a Biomolecular Computer.	DNA	2004	DBLP DOI BibTeX RDF
32	Lila Kari, Stavros Konstantinidis, Petr Sosík	Bond-Free Languages: Formalizations, Maximality and Construction Methods.	DNA	2004	DBLP DOI BibTeX RDF
32	John H. Reif, Sudheer Sahu, Peng Yin 0003	Compact Error-Resilient Computational DNA Tiling Assemblies.	DNA	2004	DBLP DOI BibTeX RDF
32	Danny van Noort	A Programmable Molecular Computer in Microreactors.	DNA	2004	DBLP DOI BibTeX RDF
32	Junghuei Chen, Russell J. Deaton, Max H. Garzon, Jin Woo Kim, David Harlan Wood, Hong Bi, Dylan Carpenter, Yu-Zhen Wang	Characterization of Non-crosshybridizing DNA Oligonucleotides Manufactured In Vitro.	DNA	2004	DBLP DOI BibTeX RDF
32	Georg Seelig, Bernard Yurke, Erik Winfree	DNA Hybridization Catalysts and Catalyst Circuits.	DNA	2004	DBLP DOI BibTeX RDF
32	Rebecca Schulman, Erik Winfree	Programmable Control of Nucleation for Algorithmic Self-assembly.	DNA	2004	DBLP DOI BibTeX RDF
32	Rudy van Vliet, Hendrik Jan Hoogeboom, Grzegorz Rozenberg	Combinatorial Aspects of Minimal DNA Expressions.	DNA	2004	DBLP DOI BibTeX RDF
32	Yuliy M. Baryshnikov, Edward G. Coffman Jr., Petar Momcilovic	DNA-Based Computation Times.	DNA	2004	DBLP DOI BibTeX RDF
32	Maurice Margenstern, Victor Mitrana, Mario J. Pérez-Jiménez	Accepting Hybrid Networks of Evolutionary Processors.	DNA	2004	DBLP DOI BibTeX RDF
32	Kenichi Fujibayashi, Satoshi Murata	A Method of Error Suppression for Self-assembling DNA Tiles.	DNA	2004	DBLP DOI BibTeX RDF
32	Peng Yin 0003, Andrew J. Turberfield, John H. Reif	Designs of Autonomous Unidirectional Walking DNA Devices.	DNA	2004	DBLP DOI BibTeX RDF
32	Erzsébet Csuhaj-Varjú, Oscar H. Ibarra, György Vaszil	On the Computational Complexity of P Automata.	DNA	2004	DBLP DOI BibTeX RDF
32	Gheorghe Paun	From Cells to Computers: Membrane Computing - A Quick Overview.	DNA	2004	DBLP DOI BibTeX RDF
32	Kenichi Wakabayashi, Masayuki Yamamura	A Design for Cellular Evolutionary Computation by Using Bacteria.	DNA	2004	DBLP DOI BibTeX RDF
32	Ho-Lin Chen, Ashish Goel	Error Free Self-assembly Using Error Prone Tiles.	DNA	2004	DBLP DOI BibTeX RDF
32	Cezar Câmpeanu, Andrei Paun	Computing Beyond the Turing Limit Using the H Systems.	DNA	2004	DBLP DOI BibTeX RDF
32	Vinhthuy T. Phan, Max H. Garzon	The Capacity of DNA for Information Encoding.	DNA	2004	DBLP DOI BibTeX RDF	Information storage capacity of DNA, h-distance, codeword design, shuffle codes, abiotic data on DNA chips, Gibbs energy
32	Arkadii G. D'yachkov, Anthony J. Macula, Wendy K. Pogozelski, Thomas E. Renz, Vyacheslav V. Rykov, David C. Torney	A Weighted Insertion-Deletion Stacked Pair Thermodynamic Metric for DNA Codes.	DNA	2004	DBLP DOI BibTeX RDF
32	Hanwen Yan	An Inexpensive LED-Based Fluorometer Used to Study a Hairpin-Based DNA Nanomachine.	DNA	2004	DBLP DOI BibTeX RDF
32	Peter Leupold	Partial Words for DNA Coding.	DNA	2004	DBLP DOI BibTeX RDF
32	Naoto Takahashi, Atsushi Kameda, Masahito Yamamoto, Azuma Ohuchi	Aqueous Computing with DNA Hairpin-Based RAM.	DNA	2004	DBLP DOI BibTeX RDF
31	Ying Zhu, Yongsheng Ding, Wanggen Li, Gregory Kemp	A proposed modularized DNA computer, based on biochips.	GEC Summit	2009	DBLP DOI BibTeX RDF	modularized, DNA computer, instruction set architecture, biochips, upgradeable
31	Michael Domaratzki	Characterizing DNA Bond Shapes Using Trajectories.	Developments in Language Theory	2006	DBLP DOI BibTeX RDF
31	Xiaolong Shi, Linqiang Pan, Xu Jin	General DNA Automaton Model with R/W Tape.	ICIC (3)	2006	DBLP DOI BibTeX RDF
31	Ming-Yang Kao, Manan Sanghi, Robert T. Schweller	Randomized Fast Design of Short DNA Words.	ICALP	2005	DBLP DOI BibTeX RDF
31	Derrel Blain, Max H. Garzon, Soo-Yong Shin, Byoung-Tak Zhang, Satoshi Kashiwamura, Masahito Yamamoto, Atsushi Kameda, Azuma Ohuchi	Development, evaluation and benchmarking of simulation software for biomolecule-based computing.	Nat. Comput.	2004	DBLP DOI BibTeX RDF	access and common repository, simulation, evaluation, user interfaces, software architecture, benchmarking, DNA-based computing
31	Christiaan V. Henkel, Joost N. Kok	Towards Evolutionary DNA Computing.	IWINAC (1)	2005	DBLP DOI BibTeX RDF
31	Atsushi Kijima, Satoshi Kobayashi	Efficient Algorithm for Testing Structure Freeness of Finite Set of Biomolecular Sequences.	DNA	2005	DBLP DOI BibTeX RDF
31	Danny van Noort, Laura F. Landweber	Towards a re-programmable DNA computer.	Nat. Comput.	2005	DBLP DOI BibTeX RDF	DNA hybridisation, PDMS valves, control, DNA computing, microfluidics
30	Akihiro Fujiwara, Satoshi Kamio	Procedures for Multiple Input Functions with DNA Strands.	IPDPS	2004	DBLP DOI BibTeX RDF
29	Piotr Wasiewicz, Jan J. Mulawka	Molecular genetic programming.	Soft Comput.	2001	DBLP DOI BibTeX RDF	Genetic programming, DNA computing, Evolutionary programming, Data flow computer
28	Anne Condon, Grzegorz Rozenberg (eds.)	DNA Computing, 6th International Workshop on DNA-Based Computers, DNA 2000, Leiden, The Netherlands, June 13-17, 2000, Revised Papers	DNA	2001	DBLP DOI BibTeX RDF
28	Don Jyh-Fu Jeng, Ikno Kim, Junzo Watada	DNA-Based Evolutionary Algorithm for Cable Trench Problem.	KES (3)	2006	DBLP DOI BibTeX RDF
28	Russell J. Deaton, Junghuei Chen, Hong Bi, Max H. Garzon, Harvey Rubin, David Harlan Wood	A PCR-based Protocol for In Vitro Selection of Non-crosshybridizing Oligonucleotides.	DNA	2002	DBLP DOI BibTeX RDF
28	Yevgenia Khodor, Julia Khodor, Thomas F. Knight Jr.	Experimental Conformation of the Basic Principles of Length-only Discrimination.	DNA	2001	DBLP DOI BibTeX RDF