Search results for "Parsimony"

Hits ?▲	Authors	Title	Venue	Year	Link
19	Pijus Simonaitis, Benjamin J. Raphael	A Maximum Parsimony Principle for Multichromosomal Complex Genome Rearrangements.	WABI	2022	DBLP DOI BibTeX RDF
19	Jingyi Liu, Ross Mawhorter, Nuo Liu, Santi Santichaivekin, Eliot C. Bush, Ran Libeskind-Hadas	Maximum parsimony reconciliation in the DTLOR model.	BMC Bioinform.	2021	DBLP DOI BibTeX RDF
19	Mark Jones 0001, Steven Kelk, Leen Stougie	Maximum parsimony distance on phylogenetic trees: A linear kernel and constant factor approximation algorithm.	J. Comput. Syst. Sci.	2021	DBLP DOI BibTeX RDF
19	Daniel Doerr, Cédric Chauve	Small Parsimony for Natural Genomes in the DCJ-Indel Model.	CoRR	2021	DBLP BibTeX RDF
19	Zhiming Zhang, Yongming Liu	Parsimony-Enhanced Sparse Bayesian Learning for Robust Discovery of Partial Differential Equations.	CoRR	2021	DBLP BibTeX RDF
19	Daniel Doerr, Cédric Chauve	Small parsimony for natural genomes in the DCJ-indel model.	J. Bioinform. Comput. Biol.	2021	DBLP DOI BibTeX RDF
19	Alba Estrada, Raimundo Real	A Stepwise Assessment of Parsimony and Fuzzy Entropy in Species Distribution Modelling.	Entropy	2021	DBLP DOI BibTeX RDF
19	Brendan Smith, Cristian Navarro-Martinez, Rebecca Buonopane, S. Ashley Byun, Murray Patterson	Correlated Evolution in the Small Parsimony Framework.	ISBRA	2021	DBLP DOI BibTeX RDF
19	Nghia Pham, Diep Thi Hoang	A distributed algorithm for the parsimony bootstrap approximation.	KSE	2021	DBLP DOI BibTeX RDF
19	Céline Scornavacca, Mathias Weller	Treewidth-Based Algorithms for the Small Parsimony Problem on Networks.	WABI	2021	DBLP DOI BibTeX RDF
19	Julio Fernández-Ceniceros, Andrés Sanz-García, Alpha V. Pernía-Espinoza, Francisco Javier Martínez de Pisón	PSO-PARSIMONY: A New Methodology for Searching for Accurate and Parsimonious Models with Particle Swarm Optimization. Application for Predicting the Force-Displacement Curve in T-stub Steel Connections.	HAIS	2021	DBLP DOI BibTeX RDF
19	Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez, Antonio Zahinos-Márquez, Leonel Sousa	GPU acceleration of Fitch's parsimony on protein data: from Kepler to Turing.	J. Supercomput.	2020	DBLP DOI BibTeX RDF
19	Adam Diehl, Alan P. Boyle	MapGL: inferring evolutionary gain and loss of short genomic sequence features by phylogenetic maximum parsimony.	BMC Bioinform.	2020	DBLP DOI BibTeX RDF
19	Benjamin Doerr, Timo Kötzing, J. A. Gregor Lagodzinski, Johannes Lengler	The impact of lexicographic parsimony pressure for ORDER/MAJORITY on the run time.	Theor. Comput. Sci.	2020	DBLP DOI BibTeX RDF
19	Timo Kötzing, J. A. Gregor Lagodzinski, Johannes Lengler, Anna Melnichenko	Destructiveness of lexicographic parsimony pressure and alleviation by a concatenation crossover in genetic programming.	Theor. Comput. Sci.	2020	DBLP DOI BibTeX RDF
19	Rama K. Vasudevan, Maxim A. Ziatdinov, Lukas Vlcek, Sergei V. Kalinin	Off-the-shelf deep learning is not enough: parsimony, Bayes and causality.	CoRR	2020	DBLP BibTeX RDF
19	Mark Jones 0001, Steven Kelk, Leen Stougie	Maximum parsimony distance on phylogenetictrees: a linear kernel and constant factor approximation algorithm.	CoRR	2020	DBLP BibTeX RDF
19	Gábor Balogh, Stephan H. Bernhart, Peter F. Stadler, Jana Schor	A probabilistic version of Sankoff's maximum parsimony algorithm.	J. Bioinform. Comput. Biol.	2020	DBLP DOI BibTeX RDF
19	Emmanuel Hainry, Damiano Mazza, Romain Péchoux	Polynomial Time over the Reals with Parsimony.	FLOPS	2020	DBLP DOI BibTeX RDF
19	Jordan Haack, Eli Zupke, Andrew Ramirez, Yi-Chieh Wu, Ran Libeskind-Hadas	Computing the Diameter of the Space of Maximum Parsimony Reconciliations in the Duplication-Transfer-Loss Model.	IEEE ACM Trans. Comput. Biol. Bioinform.	2019	DBLP DOI BibTeX RDF
19	Nina Luhmann, Manuel Lafond, Annelyse Thévenin, Aïda Ouangraoua, Roland Wittler, Cédric Chauve	The SCJ Small Parsimony Problem for Weighted Gene Adjacencies.	IEEE ACM Trans. Comput. Biol. Bioinform.	2019	DBLP DOI BibTeX RDF
19	Ross Mawhorter, Ran Libeskind-Hadas	Hierarchical clustering of maximum parsimony reconciliations.	BMC Bioinform.	2019	DBLP DOI BibTeX RDF
19	Sergio Santander-Jiménez, Miguel A. Vega-Rodríguez, Jorge Vicente-Viola, Leonel Sousa	Comparative assessment of GPGPU technologies to accelerate objective functions: A case study on parsimony.	J. Parallel Distributed Comput.	2019	DBLP DOI BibTeX RDF
19	Muhsen Hammoud, Charles Morphy D. Santos, João Paulo Gois	iTUPA: an online automated application to perform Topographic-Unit Parsimony Analysis.	Bioinform.	2019	DBLP DOI BibTeX RDF
19	Amrit Singh Bedi, Alec Koppel, Ketan Rajawat, Brian M. Sadler	Nonstationary Nonparametric Online Learning: Balancing Dynamic Regret and Model Parsimony.	CoRR	2019	DBLP BibTeX RDF
19	Bogdan Burlacu, Gabriel Kronberger, Michael Kommenda, Michael Affenzeller	Parsimony measures in multi-objective genetic programming for symbolic regression.	GECCO (Companion)	2019	DBLP DOI BibTeX RDF
19	Pratyush Nidhi Sharma, Forrest V. Morgeson III, Sunil Mithas, Salman Aljazzaf	An empirical and comparative analysis of E-government performance measurement models: Model selection via explanation, prediction, and parsimony.	Gov. Inf. Q.	2018	DBLP DOI BibTeX RDF
19	Md. Shamsuzzoha Bayzid, Tandy J. Warnow	Gene tree parsimony for incomplete gene trees: addressing true biological loss.	Algorithms Mol. Biol.	2018	DBLP DOI BibTeX RDF
19	Pawel Górecki 0001, Oliver Eulenstein	Bijective Diameters of Gene Tree Parsimony Costs.	IEEE ACM Trans. Comput. Biol. Bioinform.	2018	DBLP DOI BibTeX RDF
19	Rubén Urraca, Enrique Sodupe-Ortega, Javier Antoñanzas-Torres, Fernando Antoñanzas-Torres, F. Javier Martínez-de-Pisón-Ascacibar	Evaluation of a novel GA-based methodology for model structure selection: The GA-PARSIMONY.	Neurocomputing	2018	DBLP DOI BibTeX RDF
19	Timo Kötzing, J. A. Gregor Lagodzinski, Johannes Lengler, Anna Melnichenko	Destructiveness of Lexicographic Parsimony Pressure and Alleviation by a Concatenation Crossover in Genetic Programming.	CoRR	2018	DBLP BibTeX RDF
19	Antoine Billot, Vassili Vergopoulos	Expected utility without parsimony.	Math. Soc. Sci.	2018	DBLP DOI BibTeX RDF
19	Timo Kötzing, J. A. Gregor Lagodzinski, Johannes Lengler, Anna Melnichenko	Destructiveness of Lexicographic Parsimony Pressure and Alleviation by a Concatenation Crossover in Genetic Programming.	PPSN (2)	2018	DBLP DOI BibTeX RDF
19	Sergio Santander-Jiménez, Aleksandar Ilic, Leonel Sousa, Miguel A. Vega-Rodríguez	Accelerating the phylogenetic parsimony function on heterogeneous systems.	Concurr. Comput. Pract. Exp.	2017	DBLP DOI BibTeX RDF
19	Daniel Bork, Ricson Cheng, Jincheng Wang, Jean Sung, Ran Libeskind-Hadas	On the computational complexity of the maximum parsimony reconciliation problem in the duplication-loss-coalescence model.	Algorithms Mol. Biol.	2017	DBLP DOI BibTeX RDF
19	Utkarsh J. Dang, Antonio Punzo, Paul D. McNicholas, Salvatore Ingrassia, Ryan P. Browne	Multivariate Response and Parsimony for Gaussian Cluster-Weighted Models.	J. Classif.	2017	DBLP DOI BibTeX RDF
19	Olivier Boes, Mareike Fischer 0001, Steven Kelk	A Linear Bound on the Number of States in Optimal Convex Characters for Maximum Parsimony Distance.	IEEE ACM Trans. Comput. Biol. Bioinform.	2017	DBLP DOI BibTeX RDF
19	Henry Block, Tsutomu Maruyama	FPGA Hardware Acceleration of a Phylogenetic Tree Reconstruction with Maximum Parsimony Algorithm.	IEICE Trans. Inf. Syst.	2017	DBLP DOI BibTeX RDF
19	Sebastien Roch, Kun-Chieh Wang	Critical threshold for ancestral reconstruction by maximum parsimony on general phylogenies.	CoRR	2017	DBLP BibTeX RDF
19	Vitor Basto-Fernandes, Iryna Yevseyeva, José Ramón Méndez 0001, Jiaqi Zhao 0001, Florentino Fdez-Riverola, Michael T. M. Emmerich	Corrigendum to "A spam filtering multi-objective optimization study covering parsimony maximization and three-way classification" [Applied Soft Computing Volume 48 (2016) 111-123].	Appl. Soft Comput.	2017	DBLP DOI BibTeX RDF
19	Michael A. Rowland, Edward J. Perkins, Michael L. Mayo	Physiological fidelity or model parsimony? The relative performance of reverse-toxicokinetic modeling approaches.	BMC Syst. Biol.	2017	DBLP DOI BibTeX RDF
19	Rubén Urraca, Andrés Sanz-García, Julio Fernández-Ceniceros, Alpha V. Pernía-Espinoza, Francisco J. Martínez de Pisón Ascacibar	Improving hotel room demand forecasting with a hybrid GA-SVR methodology based on skewed data transformation, feature selection and parsimony tuning.	Log. J. IGPL	2017	DBLP DOI BibTeX RDF
19	Rogério Güths, Guilherme P. Telles, Maria Emília M. T. Walter, Nalvo F. Almeida	A Heuristic for the Live Parsimony Problem.	BIOSTEC (Selected Papers)	2017	DBLP DOI BibTeX RDF
19	Rogério Güths, Guilherme P. Telles, Maria Emília M. T. Walter, Nalvo F. Almeida	A Branch and Bound for the Large Live Parsimony Problem.	BIOINFORMATICS	2017	DBLP DOI BibTeX RDF
19	Alex Ozdemir, Michael Sheely, Daniel Bork, Ricson Cheng, Reyna Hulett, Jean Sung, Jincheng Wang, Ran Libeskind-Hadas	Clustering the Space of Maximum Parsimony Reconciliations in the Duplication-Transfer-Loss Model.	AlCoB	2017	DBLP DOI BibTeX RDF
19	Alan Leung, Sorin Lerner	Parsimony: an IDE for example-guided synthesis of lexers and parsers.	ASE	2017	DBLP DOI BibTeX RDF
19	Md. Shamsuzzoha Bayzid, Tandy J. Warnow	Gene Tree Parsimony for Incomplete Gene Trees.	WABI	2017	DBLP DOI BibTeX RDF
19	Mathieu Blanchette	Substring Parsimony.	Encyclopedia of Algorithms	2016	DBLP DOI BibTeX RDF
19	Alan Baker	Parsimony and inference to the best mathematical explanation.	Synth.	2016	DBLP DOI BibTeX RDF
19	Fabrice Pataut	Comments on "Parsimony and inference to the best mathematical explanation".	Synth.	2016	DBLP DOI BibTeX RDF
19	Jean B. Lasserre	Convex Optimization and Parsimony of Lp-balls Representation.	SIAM J. Optim.	2016	DBLP DOI BibTeX RDF
19	Steven Kelk, Mareike Fischer 0001, Vincent Moulton, Taoyang Wu	Reduction rules for the maximum parsimony distance on phylogenetic trees.	Theor. Comput. Sci.	2016	DBLP DOI BibTeX RDF
19	Gerold Jäger, Sharlee Climer, Weixiong Zhang	The complete parsimony haplotype inference problem and algorithms based on integer programming, branch-and-bound and Boolean satisfiability.	J. Discrete Algorithms	2016	DBLP DOI BibTeX RDF
19	Edwin Jacox, Cédric Chauve, Gergely J. Szöllosi, Yann Ponty, Céline Scornavacca	ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony.	Bioinform.	2016	DBLP DOI BibTeX RDF
19	Nina Luhmann, Annelyse Thévenin, Aïda Ouangraoua, Roland Wittler, Cédric Chauve	The SCJ small parsimony problem for weighted gene adjacencies (Extended version).	CoRR	2016	DBLP BibTeX RDF
19	Vitor Basto-Fernandes, Iryna Yevseyeva, José Ramón Méndez 0001, Jiaqi Zhao 0001, Florentino Fdez-Riverola, Michael T. M. Emmerich	A spam filtering multi-objective optimization study covering parsimony maximization and three-way classification.	Appl. Soft Comput.	2016	DBLP DOI BibTeX RDF
19	Karla Esmeralda Vazquez Ortiz, Jean-Michel Richer, David Lesaint	Strategies for Phylogenetic Reconstruction - For the Maximum Parsimony Problem.	BIOINFORMATICS	2016	DBLP DOI BibTeX RDF
19	Nina Luhmann, Annelyse Thévenin, Aïda Ouangraoua, Roland Wittler, Cédric Chauve	The SCJ Small Parsimony Problem for Weighted Gene Adjacencies.	ISBRA	2016	DBLP DOI BibTeX RDF
19	Francisco J. Martínez de Pisón Ascacibar, Esteban Fraile-Garcia, Javier Ferreiro-Cabello, Rubén González Crespo, Alpha V. Pernía-Espinoza	Searching Parsimonious Solutions with GA-PARSIMONY and XGBoost in High-Dimensional Databases.	SOCO-CISIS-ICEUTE	2016	DBLP DOI BibTeX RDF
19	Diep Thi Hoang, Le Sy Vinh, Tomás Flouri, Alexandros Stamatakis, Arndt von Haeseler, Bui Quang Minh	A new phylogenetic tree sampling method for maximum parsimony bootstrapping and proof-of-concept implementation.	KSE	2016	DBLP DOI BibTeX RDF
19	Veronica Dal Sasso, Luigi De Giovanni, Martine Labbé	A Column Generation Approach for Pure Parsimony Haplotyping.	SCOR	2016	DBLP DOI BibTeX RDF
19	Karla Esmeralda Vazquez Ortiz	Advanced methods to solve the maximum parsimony problem. (Méthodes avancées pour la résolution du problème de maximum parcimonie).		2016	RDF
19	Valeriy Khakhutskyy	Sparse Grids for Big Data: Exploiting Parsimony for Large-Scale Learning (Dünne Gitter für Big Data: Mit Adaptivität zur hochdimensionalen Datenanalyse) (PDF / PS)		2016	RDF
19	Vincent Moulton, Taoyang Wu	A parsimony-based metric for phylogenetic trees.	Adv. Appl. Math.	2015	DBLP DOI BibTeX RDF
19	Judith Keijsper, Tim Oosterwijk	Tractable Cases of (*, 2)-Bounded Parsimony Haplotyping.	IEEE ACM Trans. Comput. Biol. Bioinform.	2015	DBLP DOI BibTeX RDF
19	Ward C. Wheeler	Phylogenetic network analysis as a parsimony optimization problem.	BMC Bioinform.	2015	DBLP DOI BibTeX RDF
19	Mareike Fischer 0001, Leo van Iersel, Steven Kelk, Céline Scornavacca	On Computing the Maximum Parsimony Score of a Phylogenetic Network.	SIAM J. Discret. Math.	2015	DBLP DOI BibTeX RDF
19	Andrea Bettinelli, Pierre Hansen, Leo Liberti	Community detection with the weighted parsimony criterion.	J. Syst. Sci. Complex.	2015	DBLP DOI BibTeX RDF
19	Steven Kelk, Mareike Fischer 0001, Vincent Moulton, Taoyang Wu	Reduction rules for the maximum parsimony distance on phylogenetic trees.	CoRR	2015	DBLP BibTeX RDF
19	Olivier Boes, Mareike Fischer 0001, Steven Kelk	A linear bound on the number of states in optimal convex characters for maximum parsimony distance.	CoRR	2015	DBLP BibTeX RDF
19	Andrés Sanz-García, Julio Fernández-Ceniceros, Fernando Antoñanzas-Torres, Alpha V. Pernía-Espinoza, Francisco J. Martínez de Pisón Ascacibar	GA-PARSIMONY: A GA-SVR approach with feature selection and parameter optimization to obtain parsimonious solutions for predicting temperature settings in a continuous annealing furnace.	Appl. Soft Comput.	2015	DBLP DOI BibTeX RDF
19	Alberto Romagnoni, Jérôme Ribot, Daniel Bennequin, Jonathan Touboul	Parsimony, Exhaustivity and Balanced Detection in Neocortex.	PLoS Comput. Biol.	2015	DBLP DOI BibTeX RDF
19	Matthew A. Martin, Alex R. Bertels, Daniel R. Tauritz	Asynchronous Parallel Evolutionary Algorithms: Leveraging Heterogeneous Fitness Evaluation Times for Scalability and Elitist Parsimony Pressure.	GECCO (Companion)	2015	DBLP DOI BibTeX RDF
19	Lauren A. Assour, Scott J. Emrich	Global maximum-parsimony based ancestral reconstruction with non-universal genes.	ICCABS	2015	DBLP DOI BibTeX RDF
19	Jun Zhou, Yu Lin 0001, Vaibhav Rajan, William Hoskins, Jijun Tang	Maximum Parsimony Analysis of Gene Copy Number Changes.	WABI	2015	DBLP DOI BibTeX RDF
19	Rubén Urraca, Andrés Sanz-García, Julio Fernández-Ceniceros, Enrique Sodupe-Ortega, Francisco J. Martínez de Pisón Ascacibar	Improving Hotel Room Demand Forecasting with a Hybrid GA-SVR Methodology Based on Skewed Data Transformation, Feature Selection and Parsimony Tuning.	HAIS	2015	DBLP DOI BibTeX RDF
19	Benedict Paten, Daniel R. Zerbino, Glenn Hickey, David Haussler	A unifying model of genome evolution under parsimony.	BMC Bioinform.	2014	DBLP DOI BibTeX RDF
19	Amit Rechavi, Sheizaf Rafaeli	Active players in a network tell the story: Parsimony in modeling huge networks.	First Monday	2014	DBLP DOI BibTeX RDF
19	István Miklós, Sándor Z. Kiss, Eric Tannier	Counting and sampling SCJ small parsimony solutions.	Theor. Comput. Sci.	2014	DBLP DOI BibTeX RDF
19	Mun-Ho Choi, Seung-Ho Kang, Hyeong-Seok Lim	An improved preprocessing algorithm for haplotype inference by pure parsimony.	J. Bioinform. Comput. Biol.	2014	DBLP DOI BibTeX RDF
19	Robert Hochberg, Treena Larrew Milam	Data Structures for Parsimony Correlation and Biosequence Co-Evolution.	J. Comput. Biol.	2014	DBLP DOI BibTeX RDF
19	Amir Carmel, Noa Musa-Lempel, Dekel Tsur, Michal Ziv-Ukelson	The Worst Case Complexity of Maximum Parsimony.	J. Comput. Biol.	2014	DBLP DOI BibTeX RDF
19	Lavanya Kannan, Ward C. Wheeler	Exactly Computing the Parsimony Scores on Phylogenetic Networks Using Dynamic Programming.	J. Comput. Biol.	2014	DBLP DOI BibTeX RDF
19	Riccardo Poli, Nicholas Freitag McPhee	Parsimony Pressure Made Easy: Solving the Problem of Bloat in GP.	Theory and Principled Methods for the Design of Metaheuristics	2014	DBLP DOI BibTeX RDF
19	Karla Esmeralda Vazquez Ortiz, Jean-Michel Richer, David Lesaint, Eduardo Rodriguez-Tello	A bottom-up implementation of Path-Relinking for Phylogenetic reconstruction applied to Maximum Parsimony.	MCDM	2014	DBLP DOI BibTeX RDF
19	Amir Carmel, Noa Musa-Lempel, Dekel Tsur, Michal Ziv-Ukelson	The Worst Case Complexity of Maximum Parsimony.	CPM	2014	DBLP DOI BibTeX RDF
19	Damien Munch, Jean-Louis Dessalles	Assessing Parsimony in Models of Aspect.	CogSci	2014	DBLP BibTeX RDF
19	Rubén Urraca-Valle, Enrique Sodupe-Ortega, Javier Antoñanzas-Torres, Fernando Antoñanzas-Torres, Francisco J. Martínez de Pisón Ascacibar	An Overall Performance Comparative of GA-PARSIMONY Methodology with Regression Algorithms.	SOCO-CISIS-ICEUTE	2014	DBLP DOI BibTeX RDF
19	Hyun Oh Song	Learning with Parsimony for Large Scale Object Detection and Discovery.		2014	RDF
19	Sam Cowling	Ideological parsimony.	Synth.	2013	DBLP DOI BibTeX RDF
19	Daniele Catanzaro, Ramamoorthi Ravi, Russell Schwartz	A mixed integer linear programming model to reconstruct phylogenies from single nucleotide polymorphism haplotypes under the maximum parsimony criterion.	Algorithms Mol. Biol.	2013	DBLP DOI BibTeX RDF
19	Mukul S. Bansal, Oliver Eulenstein	Algorithms for Genome-Scale Phylogenetics Using Gene Tree Parsimony.	IEEE ACM Trans. Comput. Biol. Bioinform.	2013	DBLP DOI BibTeX RDF
19	Guido H. Jajamovich, Alexandros Iliadis, Dimitris Anastassiou, Xiaodong Wang 0001	Maximum-parsimony haplotype frequencies inference based on a joint constrained sparse representation of pooled DNA.	BMC Bioinform.	2013	DBLP DOI BibTeX RDF
19	Dong Do Duc, Sy Vinh Le, Huan Hoang Xuan	ACOHAP: an efficient ant colony optimization for the haplotype inference by pure parsimony problem.	Swarm Intell.	2013	DBLP DOI BibTeX RDF
19	Miklós Csürös	How to Infer Ancestral Genome Features by Parsimony: Dynamic Programming over an Evolutionary Tree.	Models and Algorithms for Genome Evolution	2013	DBLP DOI BibTeX RDF
19	Henry Block, Tsutomu Maruyama	A hardware acceleration of a phylogenetic tree reconstruction with maximum parsimony algorithm using FPGA.	FPT	2013	DBLP DOI BibTeX RDF
19	Lavanya Kannan, Ward C. Wheeler	Maximum Parsimony on Phylogenetic networks.	Algorithms Mol. Biol.	2012	DBLP DOI BibTeX RDF
19	Guido H. Jajamovich, Xiaodong Wang 0001	Maximum-Parsimony Haplotype Inference Based on Sparse Representations of Genotypes.	IEEE Trans. Signal Process.	2012	DBLP DOI BibTeX RDF
19	Igor Nor, Danny Hermelin, Sylvain Charlat, Jan Engelstadter, Max Reuter, Olivier Duron, Marie-France Sagot	Mod/Resc Parsimony Inference: Theory and application.	Inf. Comput.	2012	DBLP DOI BibTeX RDF
19	Michael Elberfeld, Till Tantau	Phylogeny- and parsimony-based haplotype inference with constraints.	Inf. Comput.	2012	DBLP DOI BibTeX RDF