Search results for "RECOMB-CG"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
1	Jean-Philippe Doyon, Céline Scornavacca, K. Yu. Gorbunov, Gergely J. Szöllosi, Vincent Ranwez, Vincent Berry	An Efficient Algorithm for Gene/Species Trees Parsimonious Reconciliation with Losses, Duplications and Transfers.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Atheer A. Matroud, Michael D. Hendy, Christopher P. Tuffley	An Algorithm to Solve the Motif Alignment Problem for Approximate Nested Tandem Repeats.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Marília D. V. Braga	On Sorting Genomes with DCJ and Indels.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Eric Tannier (eds.)	Comparative Genomics - International Workshop, RECOMB-CG 2010, Ottawa, Canada, October 9-11, 2010. Proceedings	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Andrew Wei Xu	On Exploring Genome Rearrangement Phylogenetic Patterns.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Haitao Jiang, Chunfang Zheng, David Sankoff, Binhai Zhu	Scaffold Filling under the Breakpoint Distance.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Ulisses Dias, Zanoni Dias, João C. Setubal	A Simulation Tool for the Study of Symmetric Inversions in Bacterial Genomes.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Aïda Ouangraoua, Anne Bergeron, Krister M. Swenson	Ultra-Perfect Sorting Scenarios.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Hugo Devillers, Hélène Chiapello, Sophie Schbath, Meriem El Karoui	Assessing the Robustness of Complete Bacterial Genome Segmentations.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Katharina Jahn 0001	Efficient Computation of Approximate Gene Clusters Based on Reference Occurrences.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
1	Guillaume Blin, Jens Stoye	Finding Nested Common Intervals Efficiently.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Eric Tannier	Yeast Ancestral Genome Reconstructions: The Possibilities of Computational Methods.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Zhenyu Yang, David Sankoff	Natural Parameter Values for Generalized Gene Adjacency.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	João Delgado, Inês Lynce, Vasco M. Manquinho	Computing the Summed Adjacency Disruption Number between Two Genomes with Duplicate Genes Using Pseudo-Boolean Optimization.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Zaky Adam, David Sankoff	A Statistically Fair Comparison of Ancestral Genome Reconstructions, Based on Breakpoint and Rearrangement Distances.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Minmei Hou, Cathy Riemer, Piotr Berman, Ross C. Hardison, Webb Miller	Aligning Two Genomic Sequences That Contain Duplications.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Tamir Tuller, Hadas Birin, Martin Kupiec, Eytan Ruppin	Co-evolutionary Models for Reconstructing Ancestral Genomic Sequences: Computational Issues and Biological Examples.	RECOMB-CG	2009	DBLP DOI BibTeX RDF	reconstruction of ancestral genomes, maximum likelihood, Co-evolution, maximum parsimony
1	Xiao Liu, Neil D. Clarke	Transcription Factor Binding Probabilities in Orthologous Promoters: An Alignment-Free Approach to the Inference of Functional Regulatory Targets.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Sébastien Angibaud, Guillaume Fertin, Annelyse Thévenin, Stéphane Vialette	Pseudo Boolean Programming for Partially Ordered Genomes.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Giltae Song, Louxin Zhang, Tomás Vinar, Webb Miller	Inferring the Recent Duplication History of a Gene Cluster.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Paul Medvedev, Jens Stoye	Rearrangement Models and Single-Cut Operations.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Andrew Wei Xu	DCJ Median Problems on Linear Multichromosomal Genomes: Graph Representation and Fast Exact Solutions.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Francesca D. Ciccarelli, István Miklós (eds.)	Comparative Genomics, International Workshop, RECOMB-CG 2009, Budapest, Hungary, September 27-29, 2009. Proceedings	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Guylaine Poisson, Mahdi Belcaid, Anne Bergeron	Comparative Genomics and Extensive Recombinations in Phage Communities.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Aïda Ouangraoua, Anne Bergeron	Parking Functions, Labeled Trees and DCJ Sorting Scenarios.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Dale N. Richardson, Thomas Wiehe	Properties of Sequence Conservation in Upstream Regulatory and Protein Coding Sequences among Paralogs in Arabidopsis thaliana.	RECOMB-CG	2009	DBLP DOI BibTeX RDF	Upstream, expression correlation, paralog, Arabidopsis, evolution, similarity, regulation, duplication, promoter
1	Marília D. V. Braga, Jens Stoye	Counting All DCJ Sorting Scenarios.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Cédric Chauve, Utz-Uwe Haus, Tamon Stephen, Vivija P. You	Minimal Conflicting Sets for the Consecutive Ones Property in Ancestral Genome Reconstruction.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Chih-Hao Hsu, Yu Zhang 0002, Ross C. Hardison, Webb Miller	Whole-Genome Analysis of Gene Conversion Events.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	Tomás Vinar, Brona Brejová, Giltae Song, Adam C. Siepel	Reconstructing Histories of Complex Gene Clusters on a Phylogeny.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
1	James C. Costello, Mira V. Han, Matthew W. Hahn	Limitations of Pseudogenes in Identifying Gene Losses.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Michal Ozery-Flato, Ron Shamir	Sorting Cancer Karyotypes by Elementary Operations.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Denis Bertrand, Mathieu Blanchette, Nadia El-Mabrouk	A Phylogenetic Approach to Genetic Map Refinement.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Matthias Bernt, Daniel Merkle, Martin Middendorf	An Algorithm for Inferring Mitogenome Rearrangements in a Phylogenetic Tree.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Miklós Csürös	Ancestral Reconstruction by Asymmetric Wagner Parsimony over Continuous Characters and Squared Parsimony over Distributions.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Anne Bergeron, Julia Mixtacki, Jens Stoye	On Computing the Breakpoint Reuse Rate in Rearrangement Scenarios.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Cuong Than, Guohua Jin, Luay Nakhleh	Integrating Sequence and Topology for Efficient and Accurate Detection of Horizontal Gene Transfer.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Melvin Zhang, Hon Wai Leong	Gene Team Tree: A Compact Representation of All Gene Teams.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Paul Ryvkin, Jin Jun, Edward Hemphill, Craig E. Nelson	Duplication Mechanism and Disruptions in Flanking Regions Influence the Fate of Mammalian Gene Duplicates.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Craig E. Nelson, Stéphane Vialette (eds.)	Comparative Genomics, International Workshop, RECOMB-CG 2008, Paris, France, October 13-15, 2008. Proceedings	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Bernhard Haubold, Mirjana Domazet-Loso, Thomas Wiehe	An Alignment-Free Distance Measure for Closely Related Genomes.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	David Sankoff, Chunfang Zheng, P. Kerr Wall, Claude W. dePamphilis, James H. Leebens-Mack, Victor A. Albert	Internal Validation of Ancestral Gene Order Reconstruction in Angiosperm Phylogeny.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Andrew Wei Xu	A Fast and Exact Algorithm for the Median of Three Problem-A Graph Decomposition Approach.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Krister M. Swenson, Yu Lin 0001, Vaibhav Rajan, Bernard M. E. Moret	Hurdles Hardly Have to Be Heeded.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Jean-Philippe Doyon, Cédric Chauve, Sylvie Hamel	Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Sèverine Bérard, Annie Chateau, Cédric Chauve, Christophe Paul, Eric Tannier	Perfect DCJ Rearrangement.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Jin Jun, Paul Ryvkin, Edward Hemphill, Ion I. Mandoiu, Craig E. Nelson	Estimating the Relative Contributions of New Genes from Retrotransposition and Segmental Duplication Events during Mammalian Evolution.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Dunarel Badescu, Abdoulaye Baniré Diallo, Mathieu Blanchette, Vladimir Makarenkov	An Evolutionary Study of the Human Papillomavirus Genomes.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Sophia Yancopoulos, Richard Friedberg	Sorting Genomes with Insertions, Deletions and Duplications by DCJ.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Yifat Felder, Tamir Tuller	Discovering Local Patterns of Co-evolution.	RECOMB-CG	2008	DBLP DOI BibTeX RDF
1	Jian Ma 0004, Aakrosh Ratan, Louxin Zhang, Webb Miller, David Haussler	A Heuristic Algorithm for Reconstructing Ancestral Gene Orders with Duplications.	RECOMB-CG	2007	DBLP DOI BibTeX RDF	gene order reconstruction, contiguous ancestral region, duplication
1	Chunfang Zheng, Qian Zhu 0002, David Sankoff	Parts of the Problem of Polyploids in Rearrangement Phylogeny.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Cédric Chauve, Jean-Philippe Doyon, Nadia El-Mabrouk	Inferring a Duplication, Speciation and Loss History from a Gene Tree (Extended Abstract).	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Mathieu Lajoie, Denis Bertrand, Nadia El-Mabrouk	Evolution of Tandemly Arrayed Genes in Multiple Species.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Glenn Tesler, Dannie Durand (eds.)	Comparative Genomics, RECOMB 2007 International Workshop, RECOMB-CG 2007, San Diego, CA, USA, September 16-18, 2007, Proceedings	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Max A. Alekseyev	Multi-break Rearrangements: From Circular to Linear Genomes.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Yuhong Guo, Dale Schuurmans	Learning Gene Regulatory Networks via Globally Regularized Risk Minimization.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Daniel B. Goodman, Noah Ollikainen, Chris Sholley	Baculovirus Phylogeny Based on Genome Rearrangements.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	William Arndt, Jijun Tang	Improving Inversion Median Computation Using Commuting Reversals and Cycle Information.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Guoliang Li 0002, Jian Ma 0004, Louxin Zhang	Selecting Genomes for Reconstruction of Ancestral Genomes.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Simon Gog, Martin Bader	How to Achieve an Equivalent Simple Permutation in Linear Time.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Jie Zheng 0002, Igor B. Rogozin, Eugene V. Koonin, Teresa M. Przytycka	A Rigorous Analysis of the Pattern of Intron Conservation Supports the Coelomata Clade of Animals.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
1	Ai Xia, Maria V. Sharakhova, Igor V. Sharakhov	Reconstructing an Inversion History in the Anopheles Gambiae Complex.	RECOMB-CG	2007	DBLP DOI BibTeX RDF	Anopheles gambiae complex, chromosome rearrangement, phylogeny
1	Sébastien Angibaud, Guillaume Fertin, Irena Rusu, Annelyse Thévenin, Stéphane Vialette	A Pseudo-boolean Programming Approach for Computing the Breakpoint Distance Between Two Genomes with Duplicate Genes.	RECOMB-CG	2007	DBLP DOI BibTeX RDF	breakpoint distance, heuristic, genome rearrangement, duplication, pseudo-boolean programming
1	Hao Zhao, Guillaume Bourque	Recovering True Rearrangement Events on Phylogenetic Trees.	RECOMB-CG	2007	DBLP DOI BibTeX RDF

Publications at "RECOMB-CG"( http://dblp.L3S.de/Venues/RECOMB-CG )