Search results for "SARS"

Hits ?▲	Authors	Title	Venue	Year	Link
14	Angel Jonathan Ruiz-Moreno, Raziel Cedillo-González, Luis Cordova-Bahena, Zhiqiang An, José L. Medina-Franco, Marco Velasco-Velázquez	Consensus Pharmacophore Strategy For Identifying Novel SARS-Cov-2 Mpro Inhibitors from Large Chemical Libraries.	J. Chem. Inf. Model.	2024	DBLP DOI BibTeX RDF
14	Nopawit Khamto, Kraikrit Utama, Panida Boontawee, Atchara Janthong, Suriya Tatieng, Supakorn Arthan, Vachira Choommongkol, Padchanee Sangthong, Chavi Yenjai, Nuttee Suree, Puttinan Meepowpan	Inhibitory Activity of Flavonoid Scaffolds on SARS-CoV-2 3CLpro: Insights from the Computational and Experimental Investigations.	J. Chem. Inf. Model.	2024	DBLP DOI BibTeX RDF
14	Zuher Jahshan, Leonid Yavits	ViTAL: Vision TrAnsformer based Low coverage SARS-CoV-2 lineage assignment.	Bioinform.	2024	DBLP DOI BibTeX RDF
14	Abeer AlSereidi, Sarah Qahtan M. Salih, R. T. Mohammed 0001, Aws Alaa Zaidan, Hassan Albayati, Dragan Pamucar, Ahmed Shihab Albahri, B. B. Zaidan, Khaled Shaalan, Jameel R. Al-Obaidi, Osamah Shihab Albahri, Abdullah Hussein Alamoodi, Nazia Abdul Majid, Salem Garfan, Mohammed S. Al-Samarraay, Ali Najm Jasim, M. J. Baqer	Novel Federated Decision Making for Distribution of Anti-SARS-CoV-2 Monoclonal Antibody to Eligible High-Risk Patients.	Int. J. Inf. Technol. Decis. Mak.	2024	DBLP DOI BibTeX RDF
14	Dmitry S. Kolybalov, Evgenii D. Kadtsyn, Sergey G. Arkhipov	Computer Aided Structure-Based Drug Design of Novel SARS-CoV-2 Main Protease Inhibitors: Molecular Docking and Molecular Dynamics Study.	Comput.	2024	DBLP DOI BibTeX RDF
14	Damilola Oshunyinka	Machine Learning Modeling Of SiRNA Structure-Potency Relationship With Applications Against Sars-Cov-2 Spike Gene.	CoRR	2024	DBLP DOI BibTeX RDF
14	Subhajit Kar, Madhabi Ganguly	Application of genomic signal processing as a tool for high-performance classification of SARS-CoV-2 variants: a machine learning-based approach.	Soft Comput.	2024	DBLP DOI BibTeX RDF
14	Jesús Arriaga-Hernández, Bolivia Cuevas-Otahola, José J. Oliveros Oliveros, María Monserrat Morín Castillo	Phase analysis simulating the Takeda method to obtain a 3D profile of SARS-CoV-2 cells.	Pattern Anal. Appl.	2024	DBLP DOI BibTeX RDF
14	Qian Yan, Xue-Ying Lin, Cheng-Wen Peng, Wen-Jiang Zheng, Xiao-Hong Liu, Wu-Jin Wen, Yong Jiang, Shao-Feng Zhan, Xiu-Fang Huang	Network-based analysis between SARS-CoV-2 receptor ACE2 and common host factors in COVID-19 and asthma: Potential mechanistic insights.	Biomed. Signal Process. Control.	2024	DBLP DOI BibTeX RDF
14	Juanjuan Huang, Yabo Fang, Runze Wu, Tingzheng Xia, Xuan Wang, Jiwei Jia, Guoqing Wang	All-trans retinoic acid acts as a dual-purpose inhibitor of SARS-CoV-2 infection and inflammation.	Comput. Biol. Medicine	2024	DBLP DOI BibTeX RDF
14	Fatemeh Yaghoobizadeh, Mohammad Roayaei Ardakani, Mohammad Mehdi Ranjbar, Mohammad Khosravi, Hamid Galehdari	Development of a potent recombinant scFv antibody against the SARS-CoV-2 by in-depth bioinformatics study: Paving the way for vaccine/diagnostics development.	Comput. Biol. Medicine	2024	DBLP DOI BibTeX RDF
14	Ping Wang, Sainan Zhang, Changlu Qi, Chao Wang, Zijun Zhu, Lei Shi, Liang Cheng 0006, Xue Zhang	Blood microbial analyses reveal long-term effects of SARS-CoV-2 infection on patients who recovered from COVID-19.	Comput. Biol. Medicine	2024	DBLP DOI BibTeX RDF
14	Chuan-Yuan Wang, Zhi-Ping Liu	Network Activity Evaluation Reveals Significant Gene Regulatory Architectures During SARS-CoV-2 Viral Infection From Dynamic scRNA-seq Data.	IEEE J. Biomed. Health Informatics	2024	DBLP DOI BibTeX RDF
14	Kieran D. Lamb, Martha M. Luka, Megan Saathoff, Richard J. Orton, My V. T. Phan, Matthew Cotten, Ke Yuan, David L. Robertson	Mutational signature dynamics indicate SARS-CoV-2's evolutionary capacity is driven by host antiviral molecules.	PLoS Comput. Biol.	2024	DBLP DOI BibTeX RDF
14	Michiel van Boven, Christiaan H. van Dorp, Ilse Westerhof, Vincent Jaddoe, Valerie Heuvelman, Liesbeth Duijts, Elandri Fourie, Judith Sluiter-Post, Marlies A. van Houten, Paul Badoux, Sjoerd Euser, Bjorn Herpers, Dirk Eggink, Marieke de Hoog, Trisja Boom, Joanne Wildenbeest, Louis Bont, Ganna Rozhnova, Marc J. M. Bonten, Mirjam E. Kretzschmar, Patricia Bruijning-Verhagen	Estimation of introduction and transmission rates of SARS-CoV-2 in a prospective household study.	PLoS Comput. Biol.	2024	DBLP DOI BibTeX RDF
14	Anand Ramachandran 0001, Steven S. Lumetta, Deming Chen	PandoGen: Generating complete instances of future SARS-CoV-2 sequences using Deep Learning.	PLoS Comput. Biol.	2024	DBLP DOI BibTeX RDF
14	Francisco Hernández-Cabrera, Cynthia Elizabeth Castillo-Silva, José Roberto Cantú-González, Francisco Javier Almaguer-Martínez	S-SPAM; a search method for Spatio-temporal Patterns of Mutations. Study case: A variability analysis in the spike protein of SARS-CoV-2.	J. Comput. Appl. Math.	2024	DBLP DOI BibTeX RDF
14	Guilherme F. Martins, Thiago S. Castro, Daví A. C. Ferreira	Drug repurposing for the treatment of patients infected with SARS-CoV-2.	Netw. Model. Anal. Health Informatics Bioinform.	2024	DBLP DOI BibTeX RDF
14	Alma Davidson, Marina Parr, Franziska Totzeck, Alexander Churkin, Danny Barash, Dmitrij Frishman, Tamir Tuller	Evidence of Increased Adaptation of Omicron SARS-CoV-2 Codons to Humans.	RECOMB-CG	2024	DBLP DOI BibTeX RDF
14	Josh C. D'aeth, Shubhechyya Ghosal, Fiona Grimm, David J. Haw, Esma Koca, Krystal Lau, Huikang Liu, Stefano Moret, Dheeya Rizmie, Peter C. Smith, Giovanni Forchini, Marisa Miraldo, Wolfram Wiesemann	Optimal Hospital Care Scheduling During the SARS-CoV-2 Pandemic.	Manag. Sci.	2023	DBLP DOI BibTeX RDF
14	Ali Ayadi, Claudia S. Frydman, Wissame Laddada, Isabelle Imbert, Cecilia Zanni-Merk, Lina Fatima Soualmia	Combining DEVS simulation and ontological modeling for hierarchical analysis of the SARS-CoV-2 replication.	Simul.	2023	DBLP DOI BibTeX RDF
14	Burak Erkayman, Ferhat Ak, Sadrettin Çodur	A simulation approach for COVID-19 pandemic assessment based on vaccine logistics, SARS-CoV-2 variants, and spread rate.	Simul.	2023	DBLP DOI BibTeX RDF
14	Bruno Barracosa, João Felício, Ana Carvalho, Leonilde M. Moreira, Filipa Mendes, Sandra Cabo Verde, Tânia Pinto-Varela	Decision support tool to define the optimal pool testing strategy for SARS-CoV-2.	Decis. Support Syst.	2023	DBLP DOI BibTeX RDF
14	Mughees Ahmad, Usama Ijaz Bajwa, Yasar Mehmood, Muhammad Waqas Anwar	Lightweight ResGRU: a deep learning-based prediction of SARS-CoV-2 (COVID-19) and its severity classification using multimodal chest radiography images.	Neural Comput. Appl.	2023	DBLP DOI BibTeX RDF
14	Divya Karade, Vikas Karade	AIDrugApp: artificial intelligence-based Web-App for virtual screening of inhibitors against SARS-COV-2.	J. Exp. Theor. Artif. Intell.	2023	DBLP DOI BibTeX RDF
14	Long H. Nguyen, Nhat Truong Pham, Van Huong Do, Liu Tai Nguyen, Thanh Tin Nguyen, Hai Nguyen, Ngoc Duy Nguyen, Thanh Thi Nguyen 0001, Sy Dzung Nguyen, Asim Bhatti, Chee Peng Lim	Fruit-CoV: An efficient vision-based framework for speedy detection and diagnosis of SARS-CoV-2 infections through recorded cough sounds.	Expert Syst. Appl.	2023	DBLP DOI BibTeX RDF
14	Miguel Díaz-Lozano, David Guijo-Rubio, Pedro Antonio Gutiérrez, César Hervás-Martínez	Cluster analysis and forecasting of viruses incidence growth curves: Application to SARS-CoV-2.	Expert Syst. Appl.	2023	DBLP DOI BibTeX RDF
14	Pratheeba Jeyananthan	SARS-CoV-2 Diagnosis Using Transcriptome Data: A Machine Learning Approach.	SN Comput. Sci.	2023	DBLP DOI BibTeX RDF
14	Alessandro Spelta, Nicolò Pecora, Andrea Flori, Paolo Giudici	The impact of the SARS-CoV-2 pandemic on financial markets: a seismologic approach.	Ann. Oper. Res.	2023	DBLP DOI BibTeX RDF
14	Paula Ann Gabrielle Yap, Zython Paul Lachica, Abel Leandro Paras, Ivy Grace Panogalinog, Jerrold M. Tubay, May Anne E. Mata	An agent-based model of COVID-19 dynamics during enhanced community quarantine: Exploring the role of food relief system in the presence of two SARS-CoV-2 variants.	Frontiers Appl. Math. Stat.	2023	DBLP DOI BibTeX RDF
14	Alan L. Nunes, Alba C. M. A. Melo, Claude Tadonki, Cristina Boeres, Daniel de Oliveira 0001, Lúcia Maria de Assumpção Drummond	Optimizing computational costs of Spark for SARS-CoV-2 sequences comparisons on a commercial cloud.	Concurr. Comput. Pract. Exp.	2023	DBLP DOI BibTeX RDF
14	Harry Crook, Alfredo Ramirez, Akram Hosseini, Georgios Vavougyios, Clara Lehmann, Judith Bruchfeld, Anja Schneider, Giovanni d'Avossa, Vincenzina Lo Re, Alberto Salmoiraghi, Elizabeta B. Mukaetova-Ladinska, Mohammad Katshu, Filippo M. Boneschi, Krister Håkansson, Mirjam Geerlings, Elisabeth Pracht, Agustín Ruiz, Jacobus F. A. Jansen, Heather Snyder, Miia Kivipelto, Paul Edison	European Working Group on SARS-CoV-2: Current Understanding, Unknowns, and Recommendations on the Neurological Complications of COVID-19.	Brain Connect.	2023	DBLP DOI BibTeX RDF
14	Mohamed Ramzy Ibrahim, Sherin M. Youssef, Karma M. Fathalla	Abnormality detection and intelligent severity assessment of human chest computed tomography scans using deep learning: a case study on SARS-COV-2 assessment.	J. Ambient Intell. Humaniz. Comput.	2023	DBLP DOI BibTeX RDF
14	Andrew Omame, Mujahid Abbas, Anwarud Din	Global asymptotic stability, extinction and ergodic stationary distribution in a stochastic model for dual variants of SARS-CoV-2.	Math. Comput. Simul.	2023	DBLP DOI BibTeX RDF
14	R. Prem Kumar, Prasun K. Santra, G. S. Mahapatra	Global stability and analysing the sensitivity of parameters of a multiple-susceptible population model of SARS-CoV-2 emphasising vaccination drive.	Math. Comput. Simul.	2023	DBLP DOI BibTeX RDF
14	Wanli You, Yuandao Chen	Exploring the inhibition mechanism of SARS-CoV-2 main protease by ebselen: A molecular docking, molecular dynamics simulation and DFT approach.	J. Comput. Chem.	2023	DBLP DOI BibTeX RDF
14	Md. Jaish Uddin, Hasina Akhter, Urmi Chowdhury, Jannatul Mawah, Sanzida Tul Karim, Mohammad Jomel, Md. Sirajul Islam, Mohammad Raqibul Islam, Latifa Afrin Bhuiyan Onin, Md. Ackas Ali, Faiyaz Md. Efaz, Mohammad A. Halim	Large scale peptide screening against main protease of SARS CoV-2.	J. Comput. Chem.	2023	DBLP DOI BibTeX RDF
14	Seonghan Kim, Yi Liu, Matthew Ziarnik, Sangjae Seo, Yiwei Cao, X. Frank Zhang, Wonpil Im	Binding of human ACE2 and RBD of Omicron enhanced by unique interaction patterns among SARS-CoV-2 variants of concern.	J. Comput. Chem.	2023	DBLP DOI BibTeX RDF
14	Bhavana Panthi, Saheb Dutta, Amalendu Chandra	All-atom simulations of the trimeric spike protein of SARS-CoV-2 in aqueous medium: Nature of interactions, conformational stability and free energy diagrams for conformational transition of the protein.	J. Comput. Chem.	2023	DBLP DOI BibTeX RDF
14	Susumu Morimoto	Fine structure of a partition in the spike glycoprotein encoded in the SARS-CoV-2 genome.	Biosyst.	2023	DBLP DOI BibTeX RDF
14	Suman Bhowmick, Igor M. Sokolov, Hartmut H. K. Lentz	Decoding the double trouble: A mathematical modelling of co-infection dynamics of SARS-CoV-2 and influenza-like illness.	Biosyst.	2023	DBLP DOI BibTeX RDF
14	Deepanshi 0001, Ishan Budhiraja, Deepak Garg 0002, Neeraj Kumar 0001, Rohit Sharma	A comprehensive review on variants of SARS-CoVs-2: Challenges, solutions and open issues.	Comput. Commun.	2023	DBLP DOI BibTeX RDF
14	Vishal Rana, Eli Chien, Jianhao Peng, Olgica Milenkovic	Small-Sample Estimation of the Mutational Support and Distribution of SARS-CoV-2.	IEEE ACM Trans. Comput. Biol. Bioinform.	2023	DBLP DOI BibTeX RDF
14	Mattia Rapa, Vanessa Giannetti, Maurizio Boccacci Mariani, Federico Di Francesco, Alessandro Porpiglia	Could Food Delivery Involve Certified Quality Products? An Innovative Case Study during the SARS-CoV-2 Pandemic in Italy.	J. Theor. Appl. Electron. Commer. Res.	2023	DBLP DOI BibTeX RDF
14	Davide Gadioli, Emanuele Vitali, Federico Ficarelli, Chiara Latini, Candida Manelfi, Carmine Talarico, Cristina Silvano, Carlo Cavazzoni, Gianluca Palermo, Andrea Rosario Beccari	EXSCALATE: An Extreme-Scale Virtual Screening Platform for Drug Discovery Targeting Polypharmacology to Fight SARS-CoV-2.	IEEE Trans. Emerg. Top. Comput.	2023	DBLP DOI BibTeX RDF
14	Rohith Anand Varikoti, Katherine J. Schultz, Chathuri J. Kombala, Agustin Kruel, Kristoffer R. Brandvold, Mowei Zhou, Neeraj Kumar	Integrated data-driven and experimental approaches to accelerate lead optimization targeting SARS-CoV-2 main protease.	J. Comput. Aided Mol. Des.	2023	DBLP DOI BibTeX RDF
14	Sz-Wei Chu, Feng-Sheng Wang	Fuzzy optimization for identifying antiviral targets for treating SARS-CoV-2 infection in the heart.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
14	Luísa C. de Souza, Karolayne S. Azevedo, Jackson Gomes de Souza, Raquel de M. Barbosa, Marcelo A. C. Fernandes	New proposal of viral genome representation applied in the classification of SARS-CoV-2 with deep learning.	BMC Bioinform.	2023	DBLP DOI BibTeX RDF
14	Muhammad Usman, Mujahid Abbas, Andrew Omame	Analysis of the Solution of a Model of SARS-CoV-2 Variants and Its Approximation Using Two-Step Lagrange Polynomial and Euler Techniques.	Axioms	2023	DBLP DOI BibTeX RDF
14	Zafer Öztürk, Halis Bilgil, Sezer Sorgun	Application of Fractional SIQRV Model for SARS-CoV-2 and Stability Analysis.	Symmetry	2023	DBLP DOI BibTeX RDF
14	Jie Chen 0001, Zhiwei Nie, Yu Wang, Kai Wang, Fan Xu, Zhiheng Hu, Bing Zheng, Zhennan Wang, Guoli Song, Jingyi Zhang, Jie Fu, Xiansong Huang, Zhongqi Wang, Zhixiang Ren, Qiankun Wang, Daixi Li, Dongqing Wei, Bin Zhou, Chao Yang, Yonghong Tian 0001	Running ahead of evolution - AI-based simulation for predicting future high-risk SARS-CoV-2 variants.	Int. J. High Perform. Comput. Appl.	2023	DBLP DOI BibTeX RDF
14	Maxim Zvyagin, Alexander Brace, Kyle Hippe, Yuntian Deng, Bin Zhang, Cindy Orozco Bohorquez, Austin Clyde, Bharat Kale, Danilo Perez-Rivera, Heng Ma, Carla M. Mann, Michael W. Irvin, Defne G. Ozgulbas, Natalia Vassilieva, J. Gregory Pauloski, Logan T. Ward, Valérie Hayot-Sasson, Murali Emani, Sam Foreman, Zhen Xie, Diangen Lin, Maulik Shukla, Weili Nie, Josh Romero, Christian Dallago, Arash Vahdat, Chaowei Xiao, Thomas Gibbs, Ian T. Foster, James J. Davis 0002, Michael E. Papka, Thomas S. Brettin, Rick Stevens, Anima Anandkumar, Venkatram Vishwanath, Arvind Ramanathan	GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics.	Int. J. High Perform. Comput. Appl.	2023	DBLP DOI BibTeX RDF
14	Abigail C. Dommer, Lorenzo Casalino, Fiona L. Kearns, Mia Rosenfeld, Nicholas Wauer, Surl-Hee Ahn, John Russo, A. Sofia F. Oliveira, Clare Morris, Anthony T. Bogetti, Anda Trifan, Alexander Brace, Terra Sztain, Austin Clyde, Heng Ma, S. Chakra Chennubhotla, Hyungro Lee, Matteo Turilli, Syma Khalid, Teresa Tamayo-Mendoza, Matthew Welborn, Anders S. Christensen, Daniel G. A. Smith, Zhuoran Qiao, Sai K. Sirumalla, Michael O'Connor, Frederick R. Manby, Anima Anandkumar, David J. Hardy, James C. Phillips, Abraham C. Stern, Josh Romero, David Clark, Mitchell Dorrell, Tom Maiden, Lei Huang 0019, John D. McCalpin, Christopher J. Woods, Alan Gray, Matt Williams, Bryan Barker, Harinda Rajapaksha, Richard Pitts, Tom Gibbs, John E. Stone, Daniel M. Zuckerman, Adrian J. Mulholland, Thomas F. Miller III, Shantenu Jha, Arvind Ramanathan, Lillian T. Chong, Rommie E. Amaro	#COVIDisAirborne: AI-enabled multiscale computational microscopy of delta SARS-CoV-2 in a respiratory aerosol.	Int. J. High Perform. Comput. Appl.	2023	DBLP DOI BibTeX RDF
14	Ravi B. Parikh, Yichen Zhang, Likhitha Kolla, Corey Chivers, Katherine R. Courtright, Jingsan Zhu, Amol S. Navathe, Jinbo Chen	Performance drift in a mortality prediction algorithm among patients with cancer during the SARS-CoV-2 pandemic.	J. Am. Medical Informatics Assoc.	2023	DBLP DOI BibTeX RDF
14	Zeynep Banu Ozger	A robust protein language model for SARS-CoV-2 protein-protein interaction network prediction.	Artif. Intell. Medicine	2023	DBLP DOI BibTeX RDF
14	Amiel Meiseles, Yair Motro, Lior Rokach, Jacob Moran-Gilad	Vulnerability of pangolin SARS-CoV-2 lineage assignment to adversarial attack.	Artif. Intell. Medicine	2023	DBLP DOI BibTeX RDF
14	Mohammad Khavani, Aliyeh Mehranfar, Mohammad R. K. Mofrad	On the Sensitivity and Affinity of Gold, Silver, and Platinum Surfaces against the SARS-CoV-2 Virus: A Comparative Computational Study.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Luís Queirós-Reis, João R. Mesquita, Andrea Brancale, Marcella Bassetto	Exploring the Fatty Acid Binding Pocket in the SARS-CoV-2 Spike Protein - Confirmed and Potential Ligands.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Jiahui Chen 0006, Rui Wang 0072, Yuta Hozumi, Gengzhuo Liu, Yuchi Qiu, Xiaoqi Wei, Guo-Wei Wei 0001	Emerging Dominant SARS-CoV-2 Variants.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Olivia Garland, Anh-Tien Ton, Shoeib Moradi, Jason R. Smith 0003, Suzana Kovacic, Kurtis Ng, Mohit Pandey, Fuqiang Ban, Jaeyong Lee, Marija Vuckovic, Liam J. Worrall, Robert N. Young, Ralph Pantophlet, Natalie C. J. Strynadka, Artem Cherkasov	Large-Scale Virtual Screening for the Discovery of SARS-CoV-2 Papain-like Protease (PLpro) Non-covalent Inhibitors.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Luiz Carlos Saramago, Marcos V. Santana, Bárbara Figueira Gomes, Rafael Ferreira Dantas, Mario R. Senger, Pedro Henrique Oliveira Borges, Vivian Neuza dos Santos Ferreira, Alice dos Santos Rosa, Amanda Resende Tucci, Milene Dias Miranda, Petra Lukacik, Claire Strain-Damerell, C. David Owen, Martin A. Walsh, Sabrina Baptista Ferreira, Floriano Silva-Junior	AI-Driven Discovery of SARS-CoV-2 Main Protease Fragment-like Inhibitors with Antiviral Activity In Vitro.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Jialin Bi, Junjie Wee, Xiang Liu, Cunquan Qu, Guanghui Wang 0002, Kelin Xia	Multiscale Topological Indices for the Quantitative Prediction of SARS CoV-2 Binding Affinity Change upon Mutations.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Francesca Alessandra Ambrosio, Giosuè Costa, Isabella Romeo, Francesca Esposito, Mohammad Alkhatib, Romina Salpini, Valentina Svicher, Angela Corona, Paolo Malune, Enzo Tramontano, Francesca Ceccherini-Silberstein, Stefano Alcaro, Anna Artese	Targeting SARS-CoV-2 Main Protease: A Successful Story Guided by an In Silico Drug Repurposing Approach.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Nopawit Khamto, Kraikrit Utama, Suriya Tateing, Padchanee Sangthong, Puracheth Rithchumpon, Nathaporn Cheechana, Aroonchai Saiai, Natthawat Semakul, Winita Punyodom, Puttinan Meepowpan	Discovery of Natural Bisbenzylisoquinoline Analogs from the Library of Thai Traditional Plants as SARS-CoV-2 3CLPro Inhibitors: In Silico Molecular Docking, Molecular Dynamics, and In Vitro Enzymatic Activity.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Sian Xiao, Mohammed Alshahrani, Grace Gupta, Peng Tao 0001, Gennady Verkhivker	Markov State Models and Perturbation-Based Approaches Reveal Distinct Dynamic Signatures and Hidden Allosteric Pockets in the Emerging SARS-Cov-2 Spike Omicron Variant Complexes with the Host Receptor: The Interplay of Dynamics and Convergent Evolution Modulates Allostery and Functional Mechanisms.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Piyatida Pojtanadithee, Kowit Hengphasatporn, Aphinya Suroengrit, Siwaporn Boonyasuppayakorn, Patcharin Wilasluck, Peerapon Deetanya, Kittikhun Wangkanont, I. Putu Sukanadi, Warinthorn Chavasiri, Peter Wolschann, Thierry Langer, Yasuteru Shigeta, Phornphimon Maitarad, Kamonpan Sanachai, Thanyada Rungrotmongkol	Identification of Promising Sulfonamide Chalcones as Inhibitors of SARS-CoV-2 3CLpro through Structure-Based Virtual Screening and Experimental Approaches.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Pabitra Narayan Samanta, Devashis Majumdar, Jerzy Leszczynski	Elucidating Atomistic Insight into the Dynamical Responses of the SARS-CoV-2 Main Protease for the Binding of Remdesivir Analogues: Leveraging Molecular Mechanics To Decode the Inhibition Mechanism.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Meina Ren, Ziyi Ma, Lina Zhao, Yanjiao Wang, Hailong An, Fude Sun	Self-Association of ACE-2 with Different RBD Amounts: A Dynamic Simulation Perspective on SARS-CoV-2 Infection.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Mohammad Mehdi Ghahremanpour, Anastasia Saar, Julian Tirado-Rives, William L. Jorgensen	Computation of Absolute Binding Free Energies for Noncovalent Inhibitors with SARS-CoV-2 Main Protease.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Joseph Clayton, Vinícius Martins de Oliveira, Mohamed Fouad Ibrahim, Xinyuanyuan Sun, Paween Mahinthichaichan, Mingzhe Shen, Rolf Hilgenfeld, Jana Shen	Integrative Approach to Dissect the Drug Resistance Mechanism of the H172Y Mutation of SARS-CoV-2 Main Protease.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Rajendra P. Joshi, Katherine J. Schultz, Jesse William Wilson, Agustin Kruel, Rohith Anand Varikoti, Chathuri J. Kombala, Daniel W. Kneller, Stephanie Galanie, Gwyndalyn Phillips, Qiu Zhang, Leighton Coates, Jyothi Parvathareddy, Surekha Surendranathan, Ying Kong, Austin Clyde, Arvind Ramanathan, Colleen B. Jonsson, Kristoffer R. Brandvold, Mowei Zhou, Martha S. Head, Andrey Kovalevsky, Neeraj Kumar	AI-Accelerated Design of Targeted Covalent Inhibitors for SARS-CoV-2.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Darya Stepanenko, Stephanie Budhan, Carlos Simmerling	SpikeScape: A Tool for Analyzing Structural Diversity in Experimental Structures of the SARS-CoV-2 Spike Glycoprotein.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Jianwen Zhang, Yalong Cong, Lili Duan, John Z. H. Zhang	Combined Antibodies Evusheld against the SARS-CoV-2 Omicron Variants BA.1.1 and BA.5: Immune Escape Mechanism from Molecular Simulation.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Kei Moritsugu, Toru Ekimoto, Mitsunori Ikeguchi, Akinori Kidera	Binding and Unbinding Pathways of Peptide Substrates on the SARS-CoV-2 3CL Protease.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Brandon Havranek, Robel Demissie, Hyun Lee, Shuiyun Lan, Huanchun Zhang, Stefan G. Sarafianos, Anoklase Jean-Luc Ayitou, Shahidul M. Islam	Discovery of Nirmatrelvir Resistance Mutations in SARS-CoV-2 3CLpro: A Computational-Experimental Approach.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Ahmet Yildirim, Mustafa Tekpinar	Building Quantitative Bridges between Dynamics and Sequences of SARS-CoV-2 Main Protease and a Diverse Set of Thirty-Two Proteins.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Folorunsho Bright Omage, Andrea Madabeni, Amanda Resende Tucci, Pablo Andrei Nogara, Marco Bortoli, Alice dos Santos Rosa, Vivian Neuza dos Santos Ferreira, João Batista Teixeira da Rocha, Milene Dias Miranda, Laura Orian	Diphenyl Diselenide and SARS-CoV-2: in silico Exploration of the Mechanisms of Inhibition of Main Protease (Mpro) and Papain-like Protease (PLpro).	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Natasha Gupta Vergara, Megan Gatchel, Cameron F. Abrams	Entropic Overcompensation of the N501Y Mutation on SARS-CoV-2 S Binding to ACE2.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Yanling Wu, Kun Li, Menglong Li, Xuemei Pu, Yanzhi Guo	Attention Mechanism-Based Graph Neural Network Model for Effective Activity Prediction of SARS-CoV-2 Main Protease Inhibitors: Application to Drug Repurposing as Potential COVID-19 Therapy.	J. Chem. Inf. Model.	2023	DBLP DOI BibTeX RDF
14	Rongsheng Wang, Yaofei Duan, Menghan Hu, Xiaohong Liu, Yukun Li, Qinquan Gao, Tong Tong 0001, Tao Tan	LightR-YOLOv5: A compact rotating detector for SARS-CoV-2 antigen-detection rapid diagnostic test results.	Displays	2023	DBLP DOI BibTeX RDF
14	Luigi Palopoli 0002, Daniele Fontanelli, Marco Frego, Marco Roveri	A Markovian model for the spread of the SARS-CoV-2 virus.	Autom.	2023	DBLP DOI BibTeX RDF
14	Banghua Wu, Xuebin Lv, Abdullah Alghamdi, Hamad Ali Abosaq, Mesfer Alrizq	Advancement of management information system for discovering fraud in master card based intelligent supervised machine learning and deep learning during SARS-CoV2.	Inf. Process. Manag.	2023	DBLP DOI BibTeX RDF
14	Nhat Truong Pham, Le Thi Phan, Jimin Seo, Yeonwoo Kim, Minkyung Song, Sukchan Lee, Young-Jun Jeon, Balachandran Manavalan	Advancing the accuracy of SARS-CoV-2 phosphorylation site detection via meta-learning approach.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
14	Zhi-Jian Zhou, Chen-Hui Yang, Sheng-Bao Ye, Xiao-Wei Yu, Ye Qiu, Xing-Yi Ge	VirusRecom: an information-theory-based method for recombination detection of viral lineages and its application on SARS-CoV-2.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
14	Hendrick Gao-Min Lim, Yang C. Fann, Yuan-Chii Gladys Lee	COWID: an efficient cloud-based genomics workflow for scalable identification of SARS-COV-2.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
14	Wentai Ma, Leisheng Shi, Mingkun Li	A fast and accurate method for SARS-CoV-2 genomic tracing.	Briefings Bioinform.	2023	DBLP DOI BibTeX RDF
14	Mateusz Jundzill, Riccardo Spott, Mara Lohde, Martin Hölzer, Adrian Viehweger, Christian Brandt	Managing and monitoring a pandemic: showcasing a practical approach for the genomic surveillance of SARS-CoV-2.	Database J. Biol. Databases Curation	2023	DBLP DOI BibTeX RDF
14	Pietro Pinoli, Arif Canakoglu, Stefano Ceri, Matteo Chiara, Erika Ferrandi, Luca Minotti, Anna Bernasconi 0002	VariantHunter: a method and tool for fast detection of emerging SARS-CoV-2 variants.	Database J. Biol. Databases Curation	2023	DBLP DOI BibTeX RDF
14	Chengzheng Tai, Hongjun Li, Jing Zhang 0019	BCEDB: a linear B-cell epitopes database for SARS-CoV-2.	Database J. Biol. Databases Curation	2023	DBLP DOI BibTeX RDF
14	Faraz Bagwan, Nitin Pise	A precise and timely graph-based approach to identify SARS Covid19 infection from medical imaging data using IsoCovNet.	Int. J. Imaging Syst. Technol.	2023	DBLP DOI BibTeX RDF
14	Mihai-Virgil Nichita, Maria-Alexandra Paun, Vladimir-Alexandru Paun, Viorel Puiu Paun	The SARS-CoV-2 Virus Detection with the Help of Artificial Intelligence (AI) and Monitoring the Disease Using Fractal Analysis.	Comput.	2023	DBLP DOI BibTeX RDF
14	Chaman Verma, Purushottam Sharma, Sanjay Singla, Abhishek Srivastava 0006, Ruchi Sharma	SARS-CoV-2 forecasting using regression and ARIMA.	Int. J. Syst. Assur. Eng. Manag.	2023	DBLP DOI BibTeX RDF
14	Shihu Jiao, Xiucai Ye, Chunyan Ao, Tetsuya Sakurai, Quan Zou 0001, Lei Xu	Adaptive learning embedding features to improve the predictive performance of SARS-CoV-2 phosphorylation sites.	Bioinform.	2023	DBLP DOI BibTeX RDF
14	Kyle Smith, Cheng Ye, Yatish Turakhia	Tracking and curating putative SARS-CoV-2 recombinants with RIVET.	Bioinform.	2023	DBLP DOI BibTeX RDF
14	David Liang, Ziji Zhang, Miriam Rafailovich, Marcia Simon, Yuefan Deng, Peng Zhang 0006	Coarse-Grained Modeling of the SARS-CoV-2 Spike Glycoprotein by Physics-Informed Machine Learning.	Comput.	2023	DBLP DOI BibTeX RDF
14	Gilberto González-Parra, Abraham J. Arenas	Mathematical Modeling of SARS-CoV-2 Omicron Wave under Vaccination Effects.	Comput.	2023	DBLP DOI BibTeX RDF
14	Simone Brogi, Vincenzo Calderone	Computation to Fight SARS-CoV-2 (COVID-19).	Comput.	2023	DBLP DOI BibTeX RDF
14	Aminah Alqahtani, Meznah Almutairy	Evaluating the Performance of Multiple Sequence Alignment Programs with Application to Genotyping SARS-CoV-2 in the Saudi Population.	Comput.	2023	DBLP DOI BibTeX RDF
14	Eleonora Zedda, Marco Manca 0001, Fabio Paternò, Carmen Santoro	An Adaptive Behaviour-Based Strategy for SARs interacting with Older Adults with MCI during a Serious Game Scenario.	CoRR	2023	DBLP DOI BibTeX RDF
14	Aryo Pradipta Gema, Michal Kobiela, Achille Fraisse, Ajitha Rajan, Diego A. Oyarzún, Javier Antonio Alfaro	Vaxformer: Antigenicity-controlled Transformer for Vaccine Design Against SARS-CoV-2.	CoRR	2023	DBLP DOI BibTeX RDF