Search results for "folding"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
38	Jérôme Waldispühl, Charles W. O'Donnell, Sebastian Will, Srinivas Devadas, Rolf Backofen, Bonnie Berger	Simultaneous Alignment and Folding of Protein Sequences.	RECOMB	2009	DBLP DOI BibTeX RDF
38	Adam L. Beberg, Daniel L. Ensign, Guha Jayachandran, Siraj Khaliq, Vijay S. Pande	Folding@home: Lessons from eight years of volunteer distributed computing.	IPDPS	2009	DBLP DOI BibTeX RDF
38	Kaiming Li, Lei Guo 0002, Gang Li 0001, Jingxin Nie, Carlos Faraco, Qun Zhao, L. Stephen Miller, Tianming Liu 0001	Gyral Folding Pattern Analysis via Surface Profiling.	MICCAI (1)	2009	DBLP DOI BibTeX RDF
38	Sahar Al Seesi, Sanguthevar Rajasekaran, Reda A. Ammar	RNA Pseudoknot Folding through Inference and Identification Using TAGRNA.	BICoB	2009	DBLP DOI BibTeX RDF
38	Xiaomin Hu, Jun Zhang 0003, Yun Li 0002	Flexible Protein Folding by Ant Colony Optimization.	Computational Intelligence in Biomedicine and Bioinformatics	2008	DBLP DOI BibTeX RDF
38	Alessandro Vullo, Andrea Passerini, Paolo Frasconi, Fabrizio Costa, Gianluca Pollastri	On the Convergence of Protein Structure and Dynamics. Statistical Learning Studies of Pseudo Folding Pathways.	EvoBIO	2008	DBLP DOI BibTeX RDF
38	Xiaolu Huang, Hesham H. Ali	Reducing Folding Scenario Candidates in Pseudoknots Detection Using PLMM_DPSS Algorithm Integrated With Energy Filters.	BIBE	2007	DBLP DOI BibTeX RDF
38	Chunmei Liu, Yinglei Song, Louis W. Shapiro	RNA Folding Including Pseudoknots: A New Parameterized Algorithm and Improved Upper Bound.	WABI	2007	DBLP DOI BibTeX RDF	path decomposition, maximum weighted independent set, free energy, pseudoknot, RNA secondary structure prediction
38	Vineet Bafna, Haixu Tang, Shaojie Zhang	Consensus Folding of Unaligned RNA Sequences Revisited.	RECOMB	2005	DBLP DOI BibTeX RDF
38	Huaguo Liang, Maoxiang Yi, Xiangsheng Fang, Cuiyun Jiang	A BIST Scheme Based on Selecting State Generation of Folding Counters.	Asian Test Symposium	2005	DBLP DOI BibTeX RDF
38	Li-Hsun Chen, Oscal T.-C. Chen	A hardware-efficient FIR architecture with input-data and tap folding.	ISCAS (1)	2005	DBLP DOI BibTeX RDF
38	Shawna L. Thomas, Nancy M. Amato	Parallel Protein Folding with STAPL.	IPDPS	2004	DBLP DOI BibTeX RDF
38	Thomas Herges, Alexander Schug, Wolfgang Wenzel	Protein Structure Prediction with Stochastic Optimization Methods: Folding and Misfolding the Villin Headpiece.	ICCSA (3)	2004	DBLP DOI BibTeX RDF
38	Hiroshi Shimanuki, Jien Kato, Toyohide Watanabe	A Recognition System for Folding Process of Origami Drill Books.	GREC	2003	DBLP DOI BibTeX RDF
38	J. Esch, T. D. Rogers	The Screensaver Map: Dynamics on Elliptic Curves Arising from Polygonal Folding.	Discret. Comput. Geom.	2001	DBLP DOI BibTeX RDF
38	Krzysztof S. Berezowski	Transistor Chainning with Integrated Dynamic Folding for 1-D Leaf Cell Synthesis.	DSD	2001	DBLP DOI BibTeX RDF
38	Lee-Ren Ton, Lung-Chung Chang, Chung-Ping Chung	Exploiting Java Bytecode Parallelism by Enhanced POC Folding Model (Research Note).	Euro-Par	2000	DBLP DOI BibTeX RDF
38	Jaewon Kim, Sung-Mo Kang	An Efficient Transistor Folding Algorithm for Row-Based CMOS Layout Design.	DAC	1997	DBLP DOI BibTeX RDF
38	Kazuhiro Tsuchiya, Yoshiyasu Takefuji	A neural network approach to PLA folding problems.	IEEE Trans. Comput. Aided Des. Integr. Circuits Syst.	1996	DBLP DOI BibTeX RDF
38	Chidchanok Lursinsap, Daniel Gajski	Improving a PLA Area by Pull-Up Transistor Folding.	DAC	1987	DBLP DOI BibTeX RDF
37	Cyrille Merleau Nono Saha	From RNA folding to inverse folding: a computational study: Folding and design of RNA molecules		2022	RDF
37	Juan Frausto Solís, Xavier Soberon-Mainero, Ernesto Liñán-García	MultiQuenching Annealing Algorithm for Protein Folding Problem.	MICAI	2009	DBLP DOI BibTeX RDF	Simulated Annealing, Protein Folding, Peptide
37	Huafeng Chen, Jianyong Wang	An Improved Population Migration Algorithm for the Prediction of Protein Folding.	ISNN (3)	2009	DBLP DOI BibTeX RDF	Protein-folding lattice model, Improved population migration algorithm, Stability
37	Niklas Elmqvist, Nathalie Henry, Yann Riche, Jean-Daniel Fekete	Melange: space folding for multi-focus interaction.	CHI	2008	DBLP DOI BibTeX RDF	space-distortion, split-screen, visualization, interaction, navigation, exploration, focus+context, folding
37	Jing-Fa Liu, Wen-Qi Huang	Quasi-Physical Algorithm of an Off-Lattice Model for Protein Folding Problem.	J. Comput. Sci. Technol.	2007	DBLP DOI BibTeX RDF	off-lattice model, quasi-physical algorithm, off-trap strategy, protein folding, NP-hard problem
37	Sergio Raul Duarte Torres, David Camilo Becerra Romero, Luis Fernando Niño Vasquez, Yoan José Pinzón Ardila	A novel ab-initio genetic-based approach for protein folding prediction.	GECCO	2007	DBLP DOI BibTeX RDF	3D- FCC spatial representation, ab-initio methods, protein folding problem, genetic algorithms
37	Xiaomei Li	Protein Folding Simulation with New Move Set in 3D Lattice Model.	International Conference on Computational Science (2)	2007	DBLP DOI BibTeX RDF	Protein folding simulation, 3D lattice model, move set
37	Juan Frausto Solís, E. F. Román, David Romero 0003, Xavier Soberon, Ernesto Liñán-García	Analytically Tuned Simulated Annealing Applied to the Protein Folding Problem.	International Conference on Computational Science (2)	2007	DBLP DOI BibTeX RDF	Simulated Annealing, Protein Folding, Peptide
37	Michael Wagner 0010, Jaroslaw Meller, Ron Elber	Large-scale linear programming techniques for the design of protein folding potentials.	Math. Program.	2004	DBLP DOI BibTeX RDF	PCx, Linear feasibility, Parallel processing, Linear programming, Protein folding, Interior-point algorithm
37	Arvind Gupta, Ján Manuch, Ladislav Stacho	Inverse Protein Folding in 2D HP Mode (Extended Abstract).	CSB	2004	DBLP DOI BibTeX RDF	inverse protein folding, protein stability, protein design, HP model
37	Albrecht P. Stroele, Frank Mayer	Test Scheduling with Loop Folding and Its Application to Test Configurations with Accumulators.	Asian Test Symposium	1999	DBLP DOI BibTeX RDF	loop folding, test configuration, test register, built-in self-test, test schedule, test application time, Accumulator
37	Gordon M. Crippen	Protein folding potential functions.	HICSS (5)	1995	DBLP DOI BibTeX RDF	macromolecules, potential energy functions, intramolecular mechanics, protein structure recognition problem, globular protein sequence, plausible protein conformations, native conformation, single-chain proteins, nonnative structures, multichain aggregates, disulphide bonds, bound ligands, protein folding, proteins, potential functions, molecular configurations
37	Debabrata Ghosh, Soumitra Kumar Nandy	Wave pipelined architecture folding: a method to achieve low power and low area.	VLSI Design	1995	DBLP DOI BibTeX RDF	wave pipelined architecture folding, clock-free wave pipelining scheme, chip area reduction, VLSI, low power design, logic design, pipeline processing, integrated circuit design, digital integrated circuits
35	Tracy C. Denk, Keshab K. Parhi	Synthesis of folded pipelined architectures for multirate DSP algorithms.	IEEE Trans. Very Large Scale Integr. Syst.	1998	DBLP DOI BibTeX RDF
35	Francis Alexandre	A technique for Transforming Logic Programs by Fold-Unfold Transformations.	PLILP	1992	DBLP DOI BibTeX RDF	definite program, fold-unfold, program transformation, schema
33	Vincenzo Cutello, Giuseppe Morelli, Giuseppe Nicosia, Mario Pavone	Immune Algorithms with Aging Operators for the String Folding Problem and the Protein Folding Problem.	EvoCOP	2005	DBLP DOI BibTeX RDF	memory B cells, functional model proteins, protein structure prediction, Clonal selection algorithms, HP model, aging operator
33	Stefan Aulbach, Torsten Grust, Dean Jacobs, Alfons Kemper, Jan Rittinger	Multi-tenant databases for software as a service: schema-mapping techniques.	SIGMOD Conference	2008	DBLP DOI BibTeX RDF	chunk folding, software as a service, multi-tenancy
33	Miguel M. F. Bugalho, Arlindo L. Oliveira	An Evaluation of the Impact of Side Chain Positioning on the Accuracy of Discrete Models of Protein Structures.	BSB	2008	DBLP DOI BibTeX RDF	Protein models, discrete state models, side chain positioning, protein folding
33	Kenta Matsushima, Hiroshi Shimanuki, Toyohide Watanabe	Computer-Assisted Paper Wrapping with Visualization.	Edutainment	2008	DBLP DOI BibTeX RDF	paper folding, Wrapping, process design, design support
33	Abhik Roychoudhury, I. V. Ramakrishnan	Inductively Verifying Invariant Properties of Parameterized Systems.	Autom. Softw. Eng.	2004	DBLP DOI BibTeX RDF	induction proofs, logic programming, program transformations, concurrent systems, unfolding, folding, parameterized systems
33	Francis Alexandre, Khaled Bsaïes, Moussa Demba	Predicate Synthesis from Inductive Proof Attempt of Faulty Conjectures.	LOPSTR	2003	DBLP DOI BibTeX RDF	Corrective predicate, implicative formulas, folding/unfolding rules, theorem proving, program synthesis, abduction
33	Emanuel Kitzelmann, Ute Schmid, Martin Mühlpfordt, Fritz Wysotzki	Inductive Synthesis of Functional Programs.	AISC	2002	DBLP DOI BibTeX RDF	Inductive program synthesis, recursive program schemes Topics: Symbolic computations and machine learning, term rewriting, folding
33	Walter Keller	Reverse Engineering with Petri Nets.	CSMR	2000	DBLP DOI BibTeX RDF	colored nets, engineering metaphor, Petri nets, reverse engineering, folding, design recovery
30	Erik D. Demaine, Martin L. Demaine, Goran Konjevod, Robert J. Lang	Folding a Better Checkerboard.	ISAAC	2009	DBLP DOI BibTeX RDF
30	Tuo Zhang, Lei Guo 0002, Gang Li 0001, Jingxin Nie, Tianming Liu 0001	Parametric Representation of Cortical Surface Folding Based on Polynomials.	MICCAI (1)	2009	DBLP DOI BibTeX RDF
30	Khaldoun Al Faraj, Mustapha Mojahid, Nadine Vigouroux	3DKey: An Accordion-Folding Based Virtual Keyboard for Small Screen.	INTERACT (1)	2009	DBLP DOI BibTeX RDF	3D key, accordion folds style, UMPCs, mobile devices, PDAs, handhelds, Text input, virtual keyboard, prediction system
30	Jieun K. Jeong, Piotr Berman, Teresa M. Przytycka	Improving Strand Pairing Prediction through Exploring Folding Cooperativity.	IEEE ACM Trans. Comput. Biol. Bioinform.	2008	DBLP DOI BibTeX RDF	Biology and genetics, Combinatorial algorithms
30	Yu-Ying Shih, Michael Ho	Fast parallel bio-molecular logic computing algorithms: Protein folding.	BIBE	2008	DBLP DOI BibTeX RDF
30	Valerio Senni, Alberto Pettorossi, Maurizio Proietti	A Folding Algorithm for Eliminating Existential Variables from Constraint Logic Programs.	ICLP	2008	DBLP DOI BibTeX RDF
30	Javier Álvez, Paqui Lucio	A Generalization of the Folding Rule for the Clark-Kunen Semantics.	FLOPS	2008	DBLP DOI BibTeX RDF
30	Martin T. Swain, Vitaliy Ostropytskyy, Cândida G. Silva, Frederic T. Stahl, Olivier Riche, Rui M. M. Brito, Werner Dubitzky	Grid Computing Solutions for Distributed Repositories of Protein Folding and Unfolding Simulations.	ICCS (3)	2008	DBLP DOI BibTeX RDF
30	Mayur Bubna, Naresh Shenoy, Santanu Chattopadhyay	An efficient greedy approach to PLA folding.	ISCAS	2008	DBLP DOI BibTeX RDF
30	Hans-Joachim Böckenhauer, Abu Zafer M. Dayem Ullah, Leonidas Kapsokalivas, Kathleen Steinhöfel	A Local Move Set for Protein Folding in Triangular Lattice Models.	WABI	2008	DBLP DOI BibTeX RDF
30	Mika Takata, Yasuo Matsuyama	Protein Folding Classification by Committee SVM Array.	ICONIP (2)	2008	DBLP DOI BibTeX RDF
30	Peng Yu, B. T. Thomas Yeo, Patricia Ellen Grant, Bruce Fischl, Polina Golland	Cortical Folding Development Study based on Over-Complete Spherical Wavelets.	ICCV	2007	DBLP DOI BibTeX RDF
30	Kenta Tanaka, Yusuke Kamotani, Yasuyoshi Yokokohji	Origami folding by a robotic hand.	IROS	2007	DBLP DOI BibTeX RDF
30	M. V. Judy, K. S. Ravichandran 0001	A solution to protein folding problem using a genetic algorithm with modified keep best reproduction strategy.	IEEE Congress on Evolutionary Computation	2007	DBLP DOI BibTeX RDF
30	Nilton B. Armstrong, Heitor S. Lopes, Carlos Raimundo Erig Lima	Reconfigurable Computing for Accelerating Protein Folding Simulations.	ARC	2007	DBLP DOI BibTeX RDF
30	Carolina P. de Almeida, Richard A. Gonçalves, Myriam Regattieri Delgado	A Hybrid Immune-Based System for the Protein Folding Problem.	EvoCOP	2007	DBLP DOI BibTeX RDF
30	David A. Pelta, Alberto Carrascal	Inverse Protein Folding on 2D Off-Lattice Model: Initial Results and Perspectives.	EvoBIO	2007	DBLP DOI BibTeX RDF
30	Jieun K. Jeong, Piotr Berman, Teresa M. Przytycka	Bringing Folding Pathways into Strand Pairing Prediction.	WABI	2007	DBLP DOI BibTeX RDF
30	Ydo Wexler, Chaya Ben-Zaken Zilberstein, Michal Ziv-Ukelson	A Study of Accessible Motifs and RNA Folding Complexity.	RECOMB	2006	DBLP DOI BibTeX RDF
30	Alexandru-Adrian Tantar, Nouredine Melab, El-Ghazali Talbi, Bernard Toursel	Solving the Protein Folding Problem with a Bicriterion Genetic Algorithm on the Grid.	CCGRID	2006	DBLP DOI BibTeX RDF
30	Yiming Li 0005, Shao-Ming Yu	Parallel Numerical Solution to Large-Scale Eigenvalue Problem in Master Equation of Protein Folding Kinetics.	AINA (2)	2006	DBLP DOI BibTeX RDF
30	Masoud Babaie, Hamid Movahedian, Mehrdad Sharif Bakhtiar	A Novel Method for Systematic Error Prediction of CMOS Folding and Interpolating ADC.	APCCAS	2006	DBLP DOI BibTeX RDF
30	Hiroyuki Yotsuyanagi, Toshimasa Kuchii, Shigeki Nishikawa, Masaki Hashizume, Kozo Kinoshita	Reducing Scan Shifts Using Configurations of Compatible and Folding Scan Trees.	J. Electron. Test.	2005	DBLP DOI BibTeX RDF	scan tree, logic testing, design for testability, sequential circuit
30	Anna Gambin, Damian Wójtowicz	Almost FPRAS for Lattice Models of Protein Folding.	WEA	2005	DBLP DOI BibTeX RDF
30	Tamjidul Hoque, Madhu Chetty, Laurence Dooley	A new guided genetic algorithm for 2D hydrophobic-hydrophilic model to predict protein folding.	Congress on Evolutionary Computation	2005	DBLP DOI BibTeX RDF
30	Yiming Li	Numerical Solutions of Master Equation for Protein Folding Kinetics.	ICPADS (2)	2005	DBLP DOI BibTeX RDF
30	Lech Znamirowski	Non-gradient, Sequential Algorithm for Simulation of Nascent Polypeptide Folding.	International Conference on Computational Science (1)	2005	DBLP DOI BibTeX RDF
30	Hamid Movahedian, Mehrdad Sharif Bakhtiar	A new offset cancellation technique for folding ADC.	ISCAS (1)	2005	DBLP DOI BibTeX RDF
30	Fabricio B. Bastian, Cristiano Lazzari, José Luís Almada Güntzel, Ricardo Reis 0001	A New Transistor Folding Algorithm Applied to an Automatic Full-Custom Layout Generation Tool.	PATMOS	2004	DBLP DOI BibTeX RDF
30	Bin Fu, Wei Wang 0051	A 2O(n1-(1/d)log n) Time Algorithm for d-Dimensional Protein Folding in the HP-Model.	ICALP	2004	DBLP DOI BibTeX RDF
30	Alessandro Dal Palù, Agostino Dovier, Federico Fogolari	Protein Folding Simulation in CCP.	ICLP	2004	DBLP DOI BibTeX RDF
30	Hiroyuki Yotsuyanagi, Toshimasa Kuchii, Shigeki Nishikawa, Masaki Hashizume, Kozo Kinoshita	Reducing Scan Shifts Using Folding Scan Trees.	Asian Test Symposium	2003	DBLP DOI BibTeX RDF
30	David A. Rosenblueth	A Distinct-Head Folding Rule.	ICLP	2003	DBLP DOI BibTeX RDF
30	Alena Shmygelska, Holger H. Hoos	An Improved Ant Colony Optimisation Algorithm for the 2D HP Protein Folding Problem.	AI	2003	DBLP DOI BibTeX RDF
30	R. T. Silva, Jorge R. Fernandes	A low-power CMOS folding and interpolation A/D converter with error correction.	ISCAS (1)	2003	DBLP DOI BibTeX RDF
30	Alantha Newman	A new algorithm for protein folding in the HP model.	SODA	2002	DBLP BibTeX RDF
30	Sung Il Han, Seung-Yong Park, Hyeon Kyeong Seong, Heung-Soo Kim	A Current-Mode Folding/Interpolating CMOS Analog to Quaternary Converter Using Binary to Quaternary Encoding Block.	ISMVL	2002	DBLP DOI BibTeX RDF
30	Roman Genov, Gert Cauwenberghs	Charge-based MOS correlated double sampling comparator and folding circuit.	ISCAS (5)	2002	DBLP DOI BibTeX RDF
30	Alena Shmygelska, Rosalía Aguirre-Hernández, Holger H. Hoos	An Ant Colony Optimization Algorithm for the 2D HP Protein Folding Problem.	Ant Algorithms	2002	DBLP DOI BibTeX RDF
30	Sybille Hellebrand, Huaguo Liang, Hans-Joachim Wunderlich	A Mixed Mode BIST Scheme Based on Reseeding of Folding Counters.	J. Electron. Test.	2001	DBLP DOI BibTeX RDF	store and generate schemes, BIST, deterministic BIST
30	Kaamran Raahemifar, Majid Ahmadi	An efficient 0-1 linear programming for optimal PLA folding.	ISCAS (2)	2001	DBLP DOI BibTeX RDF
30	Marc J. van Kreveld, Jack Snoeyink, Sue Whitesides	Folding Rulers Inside Triangles.	Discret. Comput. Geom.	1996	DBLP DOI BibTeX RDF
30	Hussein M. Alnuweiri, Sadiq M. Sait	Efficient network folding techniques for routing permutations in VLSI.	IEEE Trans. Very Large Scale Integr. Syst.	1995	DBLP DOI BibTeX RDF
30	Chun-Yeh Liu, Kewal K. Saluja	An efficient algorithm for bipartite PLA folding.	IEEE Trans. Comput. Aided Des. Integr. Circuits Syst.	1993	DBLP DOI BibTeX RDF
30	Michael Ess	Folding RNA on the Cray-2.	SC	1990	DBLP DOI BibTeX RDF
30	Yue-Sun Kuo, C. Chen, T. C. Hu	A heuristic algorithm for PLA block folding.	DAC	1985	DBLP DOI BibTeX RDF
28	Niklas Elmqvist, Yann Riche, Nathalie Henry Riche, Jean-Daniel Fekete	Melange: Space Folding for Visual Exploration.	IEEE Trans. Vis. Comput. Graph.	2010	DBLP DOI BibTeX RDF	split screen, space distortion, visualization, Interaction, navigation, exploration, focus+context, folding
28	Stanislaw Oldziej, Cezary Czaplewski, Adam Liwo, Harold A. Scheraga	Towards Temperature Dependent Coarse-grained Potential of Side-chain Interactions for Protein Folding Simulations.	BIBE	2010	DBLP DOI BibTeX RDF	hydrophobic interactions, coarsegrained force fields, protein folding, temperature dependence
28	Ruth Pachter, Zhiqiang Wang	Adaptive Simulated Annealing and its Application to Protein Folding.	Encyclopedia of Optimization	2009	DBLP DOI BibTeX RDF	Adaptive simulated annealing, Met-Enkephalin, Poly(L-Alanine), Optimization, Protein folding
28	John L. Klepeis, Christodoulos A. Floudas	Multiple Minima Problem in Protein Folding: aplhaBB Global Optimization Approach.	Encyclopedia of Optimization	2009	DBLP DOI BibTeX RDF	Multiple minima, Global optimization, Protein folding, ?BB
28	Daniel R. Ripoll, Adam Liwo, Harold A. Scheraga	Global Optimization in Protein Folding.	Encyclopedia of Optimization	2009	DBLP DOI BibTeX RDF	Multiple-minima problem, Global optimization, Markov process, Molecular dynamics, Protein folding
28	Yuko Okamoto	Monte-Carlo Simulated Annealing in Protein Folding.	Encyclopedia of Optimization	2009	DBLP DOI BibTeX RDF	Tertiary structure prediction, ?-helix, ?-sheet, Simulated annealing, Protein folding
28	Ioan Andricioaei, John E. Straub	Simulated Annealing Methods in Protein Folding.	Encyclopedia of Optimization	2009	DBLP DOI BibTeX RDF	Molecular optimization, Protein folding
28	Étienne Ogoubi, David Pouliot, Marcel Turcotte, Abdelhakim Hafid	Parallel Multiprocessor Approaches to the RNA Folding Problem.	PPAM	2007	DBLP DOI BibTeX RDF	message passing, folding, parallel computer architecture, secondary structure, RNA
28	Neal Lesh, Michael Mitzenmacher, Sue Whitesides	A complete and effective move set for simplified protein folding.	RECOMB	2003	DBLP DOI BibTeX RDF	local moves, tabu search, protein folding
26	David N. Olivieri	Iterative Lattice Protein Design Using Template Matching.	IWANN (2)	2009	DBLP DOI BibTeX RDF
26	Venkatesan Guruswami	Artin automorphisms, cyclotomic function fields, and folded list-decodable codes.	STOC	2009	DBLP DOI BibTeX RDF	cyclotomic function fields, frobenius automorphism, galois extensions, list decoding capacity, error-correcting codes, algebraic-geometric codes