Search results for "phylogenetics"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
22	Russell Schwartz	Phylogenetics of Heterogeneous Samples - (Keynote Talk).	ISBRA	2011	DBLP DOI BibTeX RDF
22	Tamir Tuller, Elchanan Mossel	Co-evolution is Incompatible with the Markov Assumption in Phylogenetics	CoRR	2010	DBLP BibTeX RDF
22	Roberto Blanco, Elvira Mayordomo, Esther Montes, Rafael Mayo 0001, Angelines Alberto	Scalable Phylogenetics through Input Preprocessing.	IWPACBB	2010	DBLP DOI BibTeX RDF
22	Wayne Pfeiffer, Alexandros Stamatakis	Hybrid MPI/Pthreads parallelization of the RAxML phylogenetics code.	IPDPS Workshops	2010	DBLP DOI BibTeX RDF
22	Kyle Ira Harrington, Jordan B. Pollack	Robot phylogenetics.	GECCO (Companion)	2010	DBLP DOI BibTeX RDF	phyogenetics, evolutionary algorithms, robotics, evolution, behavior, evolutionary, late breaking abstract
22	Daniel H. Huson, Vincent Moulton, Mike A. Steel	Special Section: Phylogenetics.	IEEE ACM Trans. Comput. Biol. Bioinform.	2009	DBLP DOI BibTeX RDF
22	Dan Gusfield	Outgoing EIC Editorial for this Special Section of TCBB with the Theme of Phylogenetics.	IEEE ACM Trans. Comput. Biol. Bioinform.	2009	DBLP DOI BibTeX RDF
22	Marc A. Suchard, Andrew Rambaut	Many-core algorithms for statistical phylogenetics.	Bioinform.	2009	DBLP DOI BibTeX RDF
22	Mike A. Steel, Beáta Faller	Markovian log-supermodularity, and its applications in phylogenetics.	Appl. Math. Lett.	2009	DBLP DOI BibTeX RDF
22	Peter J. Humphries, Charles Semple	Note on the hybridization number and subtree distance in phylogenetics.	Appl. Math. Lett.	2009	DBLP DOI BibTeX RDF
22	Indra Neil Sarkar, Mary G. Egan, Gloria M. Coruzzi, Ernest K. Lee, Robert DeSalle	Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics.	BMC Bioinform.	2008	DBLP DOI BibTeX RDF
22	E. O. Wiley	Phylogenetics.	Scholarpedia	2008	DBLP DOI BibTeX RDF
22	Hanno Sandvik	Tree thinking cannot taken for granted: challenges for teaching phylogenetics.	Theory Biosci.	2008	DBLP DOI BibTeX RDF
22	Neil C. A. Moore, Patrick Prosser	The Ultrametric Constraint and its Application to Phylogenetics.	J. Artif. Intell. Res.	2008	DBLP DOI BibTeX RDF
22	Johan A. A. Nylander, James C. Wilgenbusch, Dan L. Warren, David L. Swofford	AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics.	Bioinform.	2008	DBLP DOI BibTeX RDF
22	Jens Gramm, Arfst Nickelsen, Till Tantau	Fixed-Parameter Algorithms in Phylogenetics.	Comput. J.	2008	DBLP DOI BibTeX RDF
22	Vincent Berry	On building and comparing trees Application to supertrees in phylogenetics.		2008	RDF
22	Joaquín Tárraga, Ignacio Medina, Leonardo Arbiza, Jaime Huerta-Cepas, Toni Gabaldón, Joaquín Dopazo, Hernán Dopazo	Phylemon: a suite of web tools for molecular evolution, phylogenetics and phylogenomics.	Nucleic Acids Res.	2007	DBLP DOI BibTeX RDF
22	Alexandros Stamatakis, Filip Blagojevic, Dimitrios S. Nikolopoulos, Christos D. Antonopoulos	Exploring New Search Algorithms and Hardware for Phylogenetics: RAxML Meets the IBM Cell.	J. VLSI Signal Process.	2007	DBLP DOI BibTeX RDF	RAxML, IBM cell, maximum likelihood, phylogenetic inference
22	Ziheng Yang	Bayesian inference in molecular phylogenetics.	Mathematics of Evolution and Phylogeny	2007	DBLP BibTeX RDF
22	Michael D. Hendy	Hadamard conjugation: an analytic tool for phylogenetics.	Mathematics of Evolution and Phylogeny	2007	DBLP BibTeX RDF
22	Susan P. Holmes	Statistical approaches to test involving phylogenetics.	Mathematics of Evolution and Phylogeny	2007	DBLP BibTeX RDF
22	David Bryant, Nicolas Galtier, Marie-Anne Poursat	Likelihood calculation in molecular phylogenetics.	Mathematics of Evolution and Phylogeny	2007	DBLP BibTeX RDF
22	Julien Dutheil, Sylvain Gaillard, Eric Bazin, Sylvain Glemin, Vincent Ranwez, Nicolas Galtier, Khalid Belkhir	Bio++: a set of C++ libraries for sequence analysis, phylogenetics, molecular evolution and population genetics.	BMC Bioinform.	2006	DBLP DOI BibTeX RDF
22	Carolin Kosiol, Lee Bofkin, Simon Whelan	Phylogenetics by likelihood: Evolutionary modeling as a tool for understanding the genome.	J. Biomed. Informatics	2006	DBLP DOI BibTeX RDF
22	Indra Neil Sarkar	Phylogenetics in the modern era.	J. Biomed. Informatics	2006	DBLP DOI BibTeX RDF
22	Emmanuel Paradis, Julien Claude, Korbinian Strimmer	APE: Analyses of Phylogenetics and Evolution in R language.	Bioinform.	2004	DBLP DOI BibTeX RDF
22	Heiko A. Schmidt, Ekkehard Petzold, Martin Vingron, Arndt von Haeseler	Molecular phylogenetics: parallelized parameter estimation and quartet puzzling.	J. Parallel Distributed Comput.	2003	DBLP DOI BibTeX RDF
22	Gianluigi Cardinali, Francesco Maraziti, Sabrina Selvi	Electrophoretic data classification for phylogenetics and biostatistics.	Bioinform.	2003	DBLP DOI BibTeX RDF
22	Stéphane Guindon	Méthodes et algorithmes pour l'approche statistique en phylogénie. (Methods and algorithms for a statistical approach in phylogenetics).		2003	RDF
22	Bernard M. E. Moret, David A. Bader, Tandy J. Warnow	High-Performance Algorithm Engineering for Computational Phylogenetics.	J. Supercomput.	2002	DBLP DOI BibTeX RDF
22	Bernard M. E. Moret, Li-San Wang, Tandy J. Warnow	Toward New Software for Computational Phylogenetics.	Computer	2002	DBLP DOI BibTeX RDF
22	Scott Stanley, Benjamin A. Salisbury	Phylogenetic Genomics and Genomic Phylogenetics - Session Introduction.	Pacific Symposium on Biocomputing	2002	DBLP BibTeX RDF
22	M. Zilversmit, P. O'Grady, Robert DeSalle	Shallow Genomics, Phylogenetics, and Evolution in the Family Drosophilidae.	Pacific Symposium on Biocomputing	2002	DBLP BibTeX RDF
22	Alexei J. Drummond, Korbinian Strimmer	PAL: an object-oriented programming library for molecular evolution and phylogenetics.	Bioinform.	2001	DBLP DOI BibTeX RDF
22	Jennifer E. Steinbachs, Paul E. Kearney	Phylogenetics in the Post-Genomic Era - Session Introduction.	Pacific Symposium on Biocomputing	2001	DBLP BibTeX RDF
22	David Bryant	A classification of consensus methods for phylogenetics.	Bioconsensus	2001	DBLP DOI BibTeX RDF
22	Bernard M. E. Moret, David A. Bader, Tandy J. Warnow	High-Performance Algorithm Engineering for Computational Phylogenetics.	International Conference on Computational Science (2)	2001	DBLP DOI BibTeX RDF
22	Tim Massingham, Nick Goldman	EDIBLE: experimental design and information calculations in phylogenetics.	Bioinform.	2000	DBLP DOI BibTeX RDF
22	André Goffeau	Informatics, genomics, proteomics and phylogenetics by the yeast Eurofanatics.	German Conference on Bioinformatics	1997	DBLP BibTeX RDF
17	Vincent Berry, Christophe Paul, Sylvain Guillemot, François Nicolas	Linear time 3-approximation for the MAST problem.	ACM Trans. Algorithms	2009	DBLP DOI BibTeX RDF	maximum agreement subtree, maximum compatible subtree, Approximation algorithm, phylogenetic tree
17	Elchanan Mossel, Sébastien Roch, Mike A. Steel	Shrinkage Effect in Ancestral Maximum Likelihood.	IEEE ACM Trans. Comput. Biol. Bioinform.	2009	DBLP DOI BibTeX RDF	Markov processes, Biology and genetics
17	Woo-Keun Chung, Hyong-Jun Kim, Hwan-Gue Cho	A web-based comparative visualization system for human endogenous RetroVirus(HERV) on whole genomes.	DTMBIO	2009	DBLP DOI BibTeX RDF	herv, retro viruses, whole genome, visualization
17	Jianting Zhang, Michael Gertz 0001, Le Gruenwald	Efficiently managing large-scale raster species distribution data in PostgreSQL.	GIS	2009	DBLP DOI BibTeX RDF	species distribution data, window query decomposition, query optimization, quadtrees, PostgreSQL
17	Allan Sly	Reconstruction for the Potts model.	STOC	2009	DBLP DOI BibTeX RDF	reconstruction, Potts model
17	Hyun Jung Park, Tiffani L. Williams	A Fitness Distance Correlation Measure for Evolutionary Trees.	BICoB	2009	DBLP DOI BibTeX RDF
17	Sen Zhang, Jason Tsong-Li Wang	Discovering Frequent Agreement Subtrees from Phylogenetic Data.	IEEE Trans. Knowl. Data Eng.	2008	DBLP DOI BibTeX RDF	Data mining, Bioinformatics (genome or protein) databases
17	Laila A. Nahum, Sergio L. Pereira	Phylogenomics, Protein Family Evolution, and the Tree of Life: An Integrated Approach between Molecular Evolution and Computational Intelligence.	Applications of Computational Intelligence in Biology	2008	DBLP DOI BibTeX RDF
17	Kevin Buchin, Maike Buchin, Jaroslaw Byrka, Martin Nöllenburg, Yoshio Okamoto, Rodrigo I. Silveira, Alexander Wolff 0001	Drawing (Complete) Binary Tanglegrams.	GD	2008	DBLP DOI BibTeX RDF
17	Stefan Grünewald, Andreas Spillner 0001, Kristoffer Forslund, Vincent Moulton	Constructing Phylogenetic Supernetworks from Quartets.	WABI	2008	DBLP DOI BibTeX RDF
17	Filip Blagojevic, Xizhou Feng, Kirk W. Cameron, Dimitrios S. Nikolopoulos	Modeling Multigrain Parallelism on Heterogeneous Multi-core Processors: A Case Study of the Cell BE.	HiPEAC	2008	DBLP DOI BibTeX RDF
17	Sebastian Böcker, Quang Bao Anh Bui, Anke Truß	An Improved Fixed-Parameter Algorithm for Minimum-Flip Consensus Trees.	IWPEC	2008	DBLP DOI BibTeX RDF
17	Chunfang Zheng, Qian Zhu 0002, David Sankoff	Parts of the Problem of Polyploids in Rearrangement Phylogeny.	RECOMB-CG	2007	DBLP DOI BibTeX RDF
17	Sylvain Guillemot, Vincent Berry	Fixed-Parameter Tractability of the Maximum Agreement Supertree Problem.	CPM	2007	DBLP DOI BibTeX RDF
17	Subhajit Datta, Robert van Engelen, David Gaitros, Neelima Jammigumpula	Experiences with tracking the effects of changing requirements on Morphbank: a web-based bioinformatics application.	ACM Southeast Regional Conference	2007	DBLP DOI BibTeX RDF	design, metrics, analysis
17	Dan Gusfield, Yelena Frid, Daniel G. Brown 0001	Integer Programming Formulations and Computations Solving Phylogenetic and Population Genetic Problems with Missing or Genotypic Data.	COCOON	2007	DBLP DOI BibTeX RDF
17	Jonathan Kavanagh, David G. Mitchell, Eugenia Ternovska, Ján Manuch, Xiaohong Zhao, Arvind Gupta	Constructing Camin-Sokal Phylogenies Via Answer Set Programming.	LPAR	2006	DBLP DOI BibTeX RDF	Camin-Sokal, answer set programming, phylogeny, maximum parsimony
17	Xiaoxu Han	Inferring Species Phylogenies: A Microarray Approach.	ICIC (3)	2006	DBLP DOI BibTeX RDF
17	Serkan Hosten, Amit Khetan, Bernd Sturmfels	Solving the Likelihood Equations.	Found. Comput. Math.	2005	DBLP DOI BibTeX RDF	Maximum likelihood degree, Syzygies, Maximum likelihood, Phylogenetic trees
17	Mohammed Javeed Zaki	Efficiently Mining Frequent Trees in a Forest: Algorithms and Applications.	IEEE Trans. Knowl. Data Eng.	2005	DBLP DOI BibTeX RDF
17	Z. Du, Alexandros Stamatakis, F. Lin, Usman Roshan, Luay Nakhleh	Parallel Divide-and-Conquer Phylogeny Reconstruction by Maximum Likelihood.	HPCC	2005	DBLP DOI BibTeX RDF
17	Shlomo Moran, Sagi Snir	Convex Recolorings of Strings and Trees: Definitions, Hardness Results and Algorithms.	WADS	2005	DBLP DOI BibTeX RDF
17	Adam Arvelakis, Martin Reczko, Alexandros Stamatakis, Alkiviadis Symeonidis, Ioannis G. Tollis	Using Treemaps to Visualize Phylogenetic Trees.	ISBMDA	2005	DBLP DOI BibTeX RDF
17	Shlomo Moran, Sagi Snir	Efficient Approximation of Convex Recolorings.	APPROX-RANDOM	2005	DBLP DOI BibTeX RDF
17	Arvind Gupta, Ján Manuch, Ladislav Stacho, Chenchen Zhu	Small Phylogeny Problem: Character Evolution Trees.	CPM	2004	DBLP DOI BibTeX RDF
17	Jian Shen, Robert B. Heckendorn	Discrete Branch Length Representations for Genetic Algorithms in Phylogenetic Search.	EvoWorkshops	2004	DBLP DOI BibTeX RDF
17	Bernard M. E. Moret, Usman Roshan, Tandy J. Warnow	Sequence-Length Requirements for Phylogenetic Methods.	WABI	2002	DBLP DOI BibTeX RDF
17	Ganeshkumar Ganapathy, Tandy J. Warnow	Approximating the Complement of the Maximum Compatible Subset of Leaves of k Trees.	APPROX	2002	DBLP DOI BibTeX RDF
17	Bernard M. E. Moret, Tandy J. Warnow	Reconstructing Optimal Phylogenetic Trees: A Challenge in Experimental Algorithmics.	Experimental Algorithmics	2000	DBLP DOI BibTeX RDF
17	Mark J. Clement, Quinn Snell, Glenn Judd, Michael Whiting	High Performance Phylogenetic Inference.	HPDC	1999	DBLP DOI BibTeX RDF