Search results for "protein"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
60	Ruben Abagyan	Computational structural proteomics and virtual ligand screening.	RECOMB	2002	DBLP DOI BibTeX RDF
60	Jiao Li 0001, Pamela Crowell, Jake Yue Chen	Construct anticancer drug-drug correlation network.	SAC	2009	DBLP DOI BibTeX RDF	DDC (drug-drug correlation), PDA (protein-drug association), PPI (protein-protein interaction), biomedical literature mining, pancreatic cancer, breast cancer
58	Huiru Zheng, Haiying Wang 0001, David H. Glass	Integration of Genomic Data for Inferring Protein Complexes from Global Protein-Protein Interaction Networks.	IEEE Trans. Syst. Man Cybern. Part B	2008	DBLP DOI BibTeX RDF
57	Young-Rae Cho, Woochang Hwang, Aidong Zhang	Assessing Reliability of Protein-Protein Interactions by Semantic Data Integration.	ICDM Workshops	2007	DBLP DOI BibTeX RDF
57	Nazar M. Zaki, Safaai Deris, Saleh Alwahaishi	SubSS: A Protein-Protein Interaction Detection Tool.	ACIS-ICIS	2007	DBLP DOI BibTeX RDF
57	Soon-Heng Tan, Wing-Kin Sung, See-Kiong Ng	Discovering Novel Interacting Motif Pairs from Large Protein-Protein Interaction Datasets.	BIBE	2004	DBLP DOI BibTeX RDF
57	Shinsuke Dohkan, Asako Koike, Toshihisa Takagi	Prediction of Protein-Protein Interactions Using Support Vector Machines.	BIBE	2004	DBLP DOI BibTeX RDF
57	Jae-Hong Eom, Jeong Ho Chang, Byoung-Tak Zhang	Prediction of Implicit Protein-Protein Interaction by Optimal Associative Feature Mining.	IDEAL	2004	DBLP DOI BibTeX RDF
57	Hiroshi Mamitsuka	Detecting Experimental Noises in Protein-Protein Interactions with Iterative Sampling and Model-Based Clustering.	BIBE	2003	DBLP DOI BibTeX RDF
57	Yu-Dong Cai 0001, Guo-Ping Zhou	Predicting Protein-Protein Interactions with Pseudo Amino Acid Composition.	BMEI (1)	2008	DBLP DOI BibTeX RDF	Protein network, Network biology, Fruitfly, Pseudo-amino acid composition, NN-PseAA predictor, Genomic scale
57	Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jack Snoeyink, Jan F. Prins, Alexander Tropsha	Mining protein family specific residue packing patterns from protein structure graphs.	RECOMB	2004	DBLP DOI BibTeX RDF	almost-delaunay, subgraph mining, protein classification
56	Charalampos N. Moschopoulos, Georgios A. Pavlopoulos, Spiridon D. Likothanassis, Sofia Kossida	An enhanced Markov clustering method for detecting protein complexes.	BIBE	2008	DBLP DOI BibTeX RDF
56	Allister Bernard, David S. Vaughn, Alexander J. Hartemink	Reconstructing the Topology of Protein Complexes.	RECOMB	2007	DBLP DOI BibTeX RDF
56	Marco Vassura, Luciano Margara, Filippo Medri, Pietro di Lena, Piero Fariselli, Rita Casadio	Reconstruction of 3D Structures from Protein Contact Maps.	ISBRA	2007	DBLP DOI BibTeX RDF
56	Jinbo Xu, Feng Jiao, Bonnie Berger	A Parameterized Algorithm for Protein Structure Alignment.	RECOMB	2006	DBLP DOI BibTeX RDF
56	Ivelin Georgiev, Ryan H. Lilien, Bruce Randall Donald	A Novel Minimized Dead-End Elimination Criterion and Its Application to Protein Redesign in a Hybrid Scoring and Search Algorithm for Computing Partition Functions over Molecular Ensembles.	RECOMB	2006	DBLP DOI BibTeX RDF
56	Cândida G. Silva, Vitaliy Ostropytskyy, Nuno Loureiro-Ferreira, Daniel P. Berrar, Martin T. Swain, Werner Dubitzky, Rui M. M. Brito	P-found: The Protein Folding and Unfolding Simulation Repository.	CIBCB	2006	DBLP DOI BibTeX RDF
56	Vicky Choi, Navin Goyal	A Combinatorial Shape Matching Algorithm for Rigid Protein Docking.	CPM	2004	DBLP DOI BibTeX RDF
56	Adam Liwo, Jaroslaw Pillardy, Cezary Czaplewski, Jooyoung Lee 0002, Daniel R. Ripoll, Malgorzata Groth, Sylwia Rodziewicz-Motowidlo, Rajmund Kazmierkiewicz, Ryszard J. Wawak, Stanislaw Oldziej, Harold A. Scheraga	UNRES: a united-residue force field for energy-based prediction of protein structure - orgin and significance of multibody terms.	RECOMB	2000	DBLP DOI BibTeX RDF
56	Marco Vassura, Luciano Margara, Pietro di Lena, Filippo Medri, Piero Fariselli, Rita Casadio	Reconstruction of 3D Structures From Protein Contact Maps.	IEEE ACM Trans. Comput. Biol. Bioinform.	2008	DBLP DOI BibTeX RDF	Protein structure prediction, Combinatorial algorithms, Molecular Modeling, Contact map
56	Yanchao Wang, Rajshekhar Sunderraman, Piyaphol Phoungphol	High Level Programming Environment System for Protein Structure Data.	ISBRA	2007	DBLP DOI BibTeX RDF	Protein Structure Data, Domain Specific Querying, Object-oriented Databases
56	Nawar Malhis, Kelvin Xi Zhang, B. F. Francis Ouellette	Detecting Protein-Domains DNA-Motifs Association in Saccharomyces cerevisiae Regulatory Networks.	AINA Workshops (1)	2007	DBLP DOI BibTeX RDF	genetic regulation, regulatory motifs, association roles, Gene Ontology, GO, protein domain
56	Deborah K. Weisser, Judith Klein-Seetharaman	Identification of fundamental building blocks in protein sequences using statistical association measures.	SAC	2004	DBLP DOI BibTeX RDF	feature prediction, rhodopsin, mutual information, G-protein coupled receptors
56	Emad Y. Ramadan, Arijit Tarafdar, Alex Pothen	A Hypergraph Model for the Yeast Protein Complex Network.	IPDPS	2004	DBLP DOI BibTeX RDF	protein complex network, power-law network, graph core, hypergraph, vertex cover, small-world network
56	Jianjiong Gao, Ganesh Kumar Agrawal, Jay J. Thelen, Zoran Obradovic, A. Keith Dunker, Dong Xu 0002	A New Machine Learning Approach for Protein Phosphorylation Site Prediction in Plants.	BICoB	2009	DBLP DOI BibTeX RDF	Protein Phosphorylation, Phosphoproteomics, Arabidopsis, Protein Disorder, SVM, KNN
56	Angelo Marcello Anile, Vincenzo Cutello, Giuseppe Narzisi, Giuseppe Nicosia, Salvatore Spinella	Lipschitzian Pattern Search and Immunological Algorithm with Quasi-Newton Method for the Protein Folding Problem: An Innovative Multistage Approach.	WIRN/NAIS	2005	DBLP DOI BibTeX RDF	Deterministic Search, Bioinformatics, DIRECT, Protein Folding, Protein Structure Prediction, Hybrid methods, Immune Algorithms, Quasi-Newton method, Clonal Selection Algorithms
56	Xiaochun Yang 0001, Bin Wang 0015	Weave amino acid sequences for protein secondary structure prediction.	DMKD	2003	DBLP DOI BibTeX RDF	encoding schema, SVM, protein structure prediction, protein secondary structure
55	Yu-Yen Ou, Shu-An Chen, Chung-Lu Shao, Hao-Geng Hung	Using Efficient RBF Network to Identify Interface Residues Based on PSSM Profiles and Biochemical Properties.	PRIB	2007	DBLP DOI BibTeX RDF
55	Rojan Shrestha, Jisu Kim, Kyungsook Han	Prediction of RNA-Binding Residues in Proteins Using the Interaction Propensities of Amino Acids and Nucleotides.	ICIC (1)	2008	DBLP DOI BibTeX RDF	RNA-binding residues, protein-RNA interactions, support vector machine
55	Tammy M. K. Cheng, Yu-En Lu, Pietro Liò	Identification of structurally important amino acids in proteins by graph-theoretic measures.	KDD Workshop on Statistical and Relational Learning in Bioinformatics	2009	DBLP DOI BibTeX RDF	protein stability, graph theory, computational biology, vertex cover, protein structure
53	Juan Liu, Bin Liu, Deyi Li	Discovering Protein Complexes from Protein-Protein Interaction Data by Local Cluster Detecting Algorithm.	FSKD (4)	2007	DBLP DOI BibTeX RDF
53	Guillaume Fertin, Romeo Rizzi, Stéphane Vialette	Finding Exact and Maximum Occurrences of Protein Complexes in Protein-Protein Interaction Graphs.	MFCS	2005	DBLP DOI BibTeX RDF
52	Xiuquan Du, Jiaxing Cheng	Prediction of Protein-Protein Interaction Sites Using Granularity Computing of Quotient Space Theory.	CSSE (1)	2008	DBLP DOI BibTeX RDF
52	Woochang Hwang, Taehyong Kim, Young-Rae Cho, Aidong Zhang, Murali Ramanathan	SIGN: reliable protein interaction identification by integrating the Similarity In GO and the similarity in protein interaction Networks.	BIBE	2007	DBLP DOI BibTeX RDF
52	Minh Ngoc Nguyen 0002, Jagath C. Rajapakse, Kaibo Duan	Amino Acid Features for Prediction of Protein-Protein Interface Residues with Support Vector Machines.	EvoBIO	2007	DBLP DOI BibTeX RDF
52	Majid Beigi, Andreas Zell	Synthetic Protein Sequence Oversampling Method for Classification and Remote Homology Detection in Imbalanced Protein Data.	BIRD	2007	DBLP DOI BibTeX RDF
52	Pengjun Pei, Aidong Zhang	Towards Detecting Protein Complexes from Protein Interaction Data.	International Conference on Computational Science (2)	2006	DBLP DOI BibTeX RDF
52	Minh Ngoc Nguyen 0002, Jagath C. Rajapakse	Protein-Protein Interface Residue Prediction with SVM Using Evolutionary Profiles and Accessible Surface Areas.	CIBCB	2006	DBLP DOI BibTeX RDF
52	Jingkai Yu, Farshad Fotouhi, Russell L. Finley Jr.	Combining Bayesian Networks and Decision Trees to Predict Drosophila melanogaster Protein-Protein Interactions.	ICDE Workshops	2005	DBLP DOI BibTeX RDF
52	Ariel Jaimovich, Gal Elidan, Hanah Margalit, Nir Friedman	Towards an Integrated Protein-Protein Interaction Network.	RECOMB	2005	DBLP DOI BibTeX RDF
52	Jae-Hong Eom, Byoung-Tak Zhang	Adaptive Neural Network-Based Clustering of Yeast Protein-Protein Interactions.	CIT	2004	DBLP DOI BibTeX RDF
52	Alexandra Shulman-Peleg, Shira Mintz, Ruth Nussinov, Haim J. Wolfson	Protein-Protein Interfaces: Recognition of Similar Spatial and Chemical Organizations.	WABI	2004	DBLP DOI BibTeX RDF
52	Byung-Hoon Park, George Ostrouchov, Gong-Xin Yu, Al Geist, Andrey Gorin, Nagiza F. Samatova	Inference of Protein-Protein Interactions by Unlikely Profile Pair.	ICDM	2003	DBLP DOI BibTeX RDF
52	Yih-En Andrew Ban, Herbert Edelsbrunner, Johannes Rudolph	Interface surfaces for protein-protein complexes.	J. ACM	2006	DBLP DOI BibTeX RDF	geometric and topological algorithms, interface surfaces, Voronoi diagrams, Filtrations, protein interaction
52	Jianlin Cheng, Michael J. Sweredoski, Pierre Baldi	Accurate Prediction of Protein Disordered Regions by Mining Protein Structure Data.	Data Min. Knowl. Discov.	2005	DBLP DOI BibTeX RDF	disordered regions, protein structure prediction, recursive neural networks
52	Yih-En Andrew Ban, Herbert Edelsbrunner, Johannes Rudolph	Interface surfaces for protein-protein complexes.	RECOMB	2004	DBLP DOI BibTeX RDF	geometric and topological algorithms, interface surfaces, voronoi diagrams, filtrations, protein interaction
52	Chengjie Sun, Lei Lin 0001, Xiaolong Wang 0001, Yi Guan	Using Maximum Entropy Model to Extract Protein-Protein Interaction Information from Biomedical Literature.	ICIC (1)	2007	DBLP DOI BibTeX RDF	machine learning, text mining, maximum entropy, protein-protein interaction
51	Nazar Zaki	Protein-Protein Interaction Prediction Using Homology and Inter-domain Linker Region Information.	World Congress on Engineering (Selected Papers)	2008	DBLP DOI BibTeX RDF	Inter-domain Linker Region, yeast protein, Prediction, Protein-Protein Interaction, Homology
50	Ashlie Brown, Hayes Raffle	Opportunities for actuated tangible interfaces to improve protein study.	CHI Extended Abstracts	2009	DBLP DOI BibTeX RDF	education, tangible user interface, actuation
50	TaeHyun Hwang, Ze Tian, Rui Kuang, Jean-Pierre A. Kocher	Learning on Weighted Hypergraphs to Integrate Protein Interactions and Gene Expressions for Cancer Outcome Prediction.	ICDM	2008	DBLP DOI BibTeX RDF
50	Nils Weskamp, Eyke Hüllermeier, Daniel Kuhn, Gerhard Klebe	Multiple Graph Alignment for the Structural Analysis of Protein Active Sites.	IEEE ACM Trans. Comput. Biol. Bioinform.	2007	DBLP DOI BibTeX RDF	structural pattern discovery, fuzzy patterns, graph mining, Knowledge discovery in databases, drug design
50	Anshul Nigham, David Hsu	Protein Conformational Flexibility Analysis with Noisy Data.	RECOMB	2007	DBLP DOI BibTeX RDF
50	Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001	Integration of Protein Data Sources Through PO.	DEXA	2006	DBLP DOI BibTeX RDF
50	Chan Yong Park, Sung-Hee Park, Dae-Hee Kim, Soo-Jun Park, Mankyu Sung, Hong-Ro Lee, Jung-Sub Shin, Chi-Jung Hwang	Fast Protein Structure Alignment Algorithm Based on Local Geometric Similarity.	MICAI	2006	DBLP DOI BibTeX RDF
50	Min Hong, David J. Osguthorpe, Min-Hyung Choi	Protein Simulation Using Fast Volume Preservation.	International Conference on Computational Science (1)	2006	DBLP DOI BibTeX RDF
50	Wen-Yun Yang, Bao-Liang Lu, Yang Yang 0030	A Comparative Study on Feature Extraction from Protein Sequences for Subcellular Localization Prediction.	CIBCB	2006	DBLP DOI BibTeX RDF
50	Min Su Lee, Seung-Soo Park	Comparative Analysis of Classification Methods for Protein Interaction Verification System.	ADVIS	2006	DBLP DOI BibTeX RDF
50	Jinsun Hong, Kyungsook Han	Prediction of Protein Interactions by the Domain and Sub-cellular Localization Information.	International Conference on Computational Science (3)	2005	DBLP DOI BibTeX RDF
50	Jingyi Yang, Jitender S. Deogun, Zhaohui Sun	A New Scheme for Protein Sequence Motif Extraction.	HICSS	2005	DBLP DOI BibTeX RDF
50	Xiaoli Li 0001, Soon-Heng Tan, See-Kiong Ng	Protein Interaction Prediction Using Inferred Domain Interactions and Biologically-Significant Negative Dataset.	ICCSA (3)	2005	DBLP DOI BibTeX RDF
50	Sung-Hee Park, Keun Ho Ryu, Hyeon S. Son	Protein Structure Modeling Using a Spatial Model for Structure Comparison.	IDEAL	2003	DBLP DOI BibTeX RDF
50	Oliver Kohlbacher, Andreas Burchardt, Andreas Moll, Andreas Hildebrandt 0001, Peter Bayer, Hans-Peter Lenhof	A NMR-spectra-based scoring function for protein docking.	RECOMB	2001	DBLP DOI BibTeX RDF
50	Marc D. Hansen, Doanna Meads, Alex Pang	Comparative Visualization of Protein Structure-Sequence Alignments.	INFOVIS	1998	DBLP DOI BibTeX RDF
50	Alena Shmygelska	An extremal optimization search method for the protein folding problem: the go-model example.	GECCO (Companion)	2007	DBLP DOI BibTeX RDF	go-model, protein folding, extremal optimization
50	Mihaela Pertea, Steven Salzberg	Using Protein Domains to Improve the Accuracy of Ab Initio Gene Finding.	WABI	2007	DBLP DOI BibTeX RDF	Pfam, GHMM, ab intio gene finding, protein domain, profile HMM
50	Hong Liu 0001, Haodi Feng, Daming Zhu	Prediction of Protein Subcellular Locations by Combining K-Local Hyperplane Distance Nearest Neighbor.	ADMA	2007	DBLP DOI BibTeX RDF	Subcellular Location, Protein, Ensemble Classifier
50	Jianlin Cheng, Michael J. Sweredoski, Pierre Baldi	DOMpro: Protein Domain Prediction Using Profiles, Secondary Structure, Relative Solvent Accessibility, and Recursive Neural Networks.	Data Min. Knowl. Discov.	2006	DBLP DOI BibTeX RDF	domain, protein structure prediction, recursive neural networks
50	Michela Taufer, Chahm An, Andreas Kerstens, Charles L. Brooks III	Predictor@Home: A "Protein Structure Prediction Supercomputer' Based on Global Computing.	IEEE Trans. Parallel Distributed Syst.	2006	DBLP DOI BibTeX RDF	Global computing paradigm, public resources, protein conformational sampling, Monte Carlo simulations, molecular dynamics
50	Janice I. Glasgow, Tony Kuo, Jim Davies	Protein Structure from Contact Maps: A Case-Based Reasoning Approach.	Inf. Syst. Frontiers	2006	DBLP DOI BibTeX RDF	Case-based reasoning, Analogy, Protein structure, Secondary structure, Contact maps
50	Nitin Gupta, Nitin Mangal, Kamal Tiwari, Pabitra Mitra	Mining Quantitative Association Rules in Protein Sequences.	Selected Papers from AusDM	2006	DBLP DOI BibTeX RDF	quantitative association rule mining, protein composition, Data mining
50	Jake Yue Chen, Sarah L. Pinkerton, Changyu Shen, Mu Wang	An integrated computational proteomics method to extract protein targets for Fanconi Anemia studies.	SAC	2006	DBLP DOI BibTeX RDF	disease target, fanconi anemia, proteomics, protein interaction network
50	S. Alireza Aghili, Divyakant Agrawal, Amr El Abbadi	PADS: Protein Structure Alignment Using Directional Shape Signatures.	DASFAA	2005	DBLP DOI BibTeX RDF	Protein Structure Comparison, Bioinformatics, Shape Similarity, Biological Data Mining
50	Nan Jiang, Wendy Xinyu Wu, Ian Mitchell 0002	Protein threading with residue-environment matching by artificial neural networks.	SAC	2004	DBLP DOI BibTeX RDF	decoy set, knowledge-based potential, artificial neural networks, protein threading
50	Yen-Chu Hsu, Chien-Ming Chen, Tun-Wen Pai, Jyh-Fu Jeng, Chin-Hua Hu, Wen-Shyong Tzou	Length Encoded Secondary Structure Profile for Remote Homologous Protein Detection.	ICA3PP	2009	DBLP DOI BibTeX RDF	protein sequence comparison, secondary structure element alignment, length encoded profile, dynamic programming, protein folding
50	Thomas Lingner, Peter Meinicke	Fast Target Set Reduction for Large-Scale Protein Function Prediction: A Multi-class Multi-label Machine Learning Approach.	WABI	2008	DBLP DOI BibTeX RDF	Pfam, target set reduction, machine learning, large-scale, protein classification, multi-class, metagenomics, homology search, protein function prediction, multi-label
50	Susan Jones, Yoichi Mukarami	Patch Prediction of Protein Interaction Sites: Validation of a Scoring Function for an Online Server.	BIRD	2007	DBLP DOI BibTeX RDF	homodimer, acessible surface area, prediction, protein-protein interaction, surface patch
50	Stefan Balev	Solving the Protein Threading Problem by Lagrangian Relaxation.	WABI	2004	DBLP DOI BibTeX RDF	sequence-structure alignment, Lagrangian relaxation and duality, dynamic programming, integer programming, protein structure prediction, protein threading, subgradient optimization
50	Peng-Liang Wang, Du Zhang	Protein Secondary Structure Prediction with Bayesian Learning Method.	ICTAI	2002	DBLP DOI BibTeX RDF	naïve Bayes classifier, Protein Data Bank, protein secondary structure prediction, SCOP
50	John Atkins, William E. Hart	On the Intractability of Protein Folding with a Finite Alphabet of Amino Acids.	Algorithmica	1999	DBLP DOI BibTeX RDF	Protein folding, Protein structure prediction, Intractability
50	Roderic Guigó, Temple F. Smith	Inferring Correlation Between Database Queries: Analysis of Protein Sequence Patterns.	IEEE Trans. Pattern Anal. Mach. Intell.	1993	DBLP DOI BibTeX RDF	correlation inference, annotation query, protein sequence pattern analysis, stochastic dependence measurement, set similarity measure, protein sequence database, first-order language, query space, set algebra, query processing, query language, database theory, set theory, algebra, biology computing, proteins, database queries, correlation coefficient, asymptotic approximation
50	Tatsuya Akutsu, Kentaro Onizuka, Masato Ishikawa	New hashing techniques and their application to a protein structure database system.	HICSS (5)	1995	DBLP DOI BibTeX RDF	protein structure database system, hash vector, fixed length fragment, three dimensional protein structure, true hash vectors, root mean square deviation, PDB data, PROTEIX, database management systems, database management system, file organisation, biology computing, proteins, protein structures, structural similarity, molecular configurations, molecular biophysics, hashing techniques
49	Catherine J. Hack, Jesús A. López	An Exploration of Some Factors Affecting the Correlation of mRNA and Proteomic Data.	KELSI	2004	DBLP DOI BibTeX RDF
49	Matthias Wilm	Creating the backbone for the virtual cell: cell mapping projects on the run (abstract only).	RECOMB	2001	DBLP DOI BibTeX RDF
49	Yuan F. Zheng, Weidong Chen 0001	Mobile robot team forming for crystallization of proteins.	Auton. Robots	2007	DBLP DOI BibTeX RDF	Robot team forming, Protein crystallization, Simplicity and locality, Mobile robots
49	Hugo P. Bastos, Catia Pesquita, Daniel Faria, André O. Falcão	BOLOS: BLAST & Ontology Linked-hOmologue Stars.	SAC	2008	DBLP DOI BibTeX RDF	protein clustering, protein homologues, gene ontology
49	Qiguo Rong, Zhe Zhang	Predict Molecular Regulatory Network of Norway Rat under the Frame of Data Integration.	ICIC (2)	2008	DBLP DOI BibTeX RDF	molecular regulatory network, protein-DNA interaction, support vector machines, data integration, evidence, protein-protein interaction
46	Cao D. Nguyen, Katheleen J. Gardiner, Duong Nguyen, Krzysztof J. Cios	Prediction of Protein Functions from Protein Interaction Networks: A Naïve Bayes Approach.	PRICAI	2008	DBLP DOI BibTeX RDF	Supplementary Materials www.egr.vcu.edu/cs/dmb/Bayesian
46	Srinivas Pasupuleti	Detection of Protein Complexes in Protein Interaction Networks Using n-Clubs.	EvoBIO	2008	DBLP DOI BibTeX RDF
46	Marek Freindorf, Matthew D. Jones, Yihan Shao, Jing Kong, Thomas R. Furlani	Large-Scale QM/MM Calculations of Electronic Excitations in Yellow Protein: Toward Petascale Level of Protein Calculations.	BIBE	2007	DBLP DOI BibTeX RDF
46	Luwen Zhang, Wu Zhang	Predicting Functional Protein-Protein Interactions Based on Computational Methods.	LSMS (2)	2007	DBLP DOI BibTeX RDF
46	Yu Xue 0001, Changjiang Jin, Xuebiao Yao	HSPPIP: An Online Tool for Prediction of Protein-Protein Interactions in Humans.	ICIC (3)	2006	DBLP DOI BibTeX RDF
46	Jinyan Li 0001, Haiquan Li	Using Fixed Point Theorems to Model the Binding in Protein-Protein Interactions.	IEEE Trans. Knowl. Data Eng.	2005	DBLP DOI BibTeX RDF
46	Jae-Hong Eom, Byoung-Tak Zhang	Prediction of Yeast Protein-Protein Interactions by Neural Feature Association Rule.	ICANN (2)	2005	DBLP DOI BibTeX RDF
46	Jake Yue Chen, Andrey Y. Sivachenko, Russell Bell, Cornelia Kurschner, Irene Ota, Sudhir Sahasrabudhe	Initial Large-scale Exploration of Protein-protein Interactions in Human Brain.	CSB	2003	DBLP DOI BibTeX RDF
46	Iti Chaturvedi, Meena K. Sakharkar, Jagath C. Rajapakse	Validation of Gene Regulatory Networks from Protein-Protein Interaction Data: Application to Cell-Cycle Regulation.	PRIB	2007	DBLP DOI BibTeX RDF	genetic algorithms, Dynamic Bayesian networks, gene regulatory networks, protein-protein interactions
46	Maurice H. T. Ling, Christophe Lefèvre, Kevin R. Nicholas, Feng Lin 0002	Reconstruction of Protein-Protein Interaction Pathways by Mining Subject-Verb-Objects Intermediates.	PRIB	2007	DBLP DOI BibTeX RDF	biomedical literature analysis, monty lingua, protein-protein interaction
46	Tetsuya Sato 0003, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh	Inference of Protein-Protein Interactions by Using Co-evolutionary Information.	AB	2007	DBLP DOI BibTeX RDF	protein-protein, partial correlation coefficient, co-evolution, projection operation
46	Daniel Duanqing Wu, Xiaohua Hu 0001	Mining and analyzing the topological structure of protein-protein interaction networks.	SAC	2006	DBLP DOI BibTeX RDF	networks, graphs, topology, power law, protein - protein interactions, scale - free
46	Jin Chen 0012, Wynne Hsu, Mong-Li Lee, See-Kiong Ng	NeMoFinder: dissecting genome-wide protein-protein interactions with meso-scale network motifs.	KDD	2006	DBLP DOI BibTeX RDF	graph mining, network motif, protein-protein interaction network
46	Ying Xu 0001, Dong Xu 0002, Oakley H. Crawford, J. Ralph Einstein, Engin Serpersu	Protein structure determination using protein threading and sparse NMR data (extended abstract).	RECOMB	2000	DBLP DOI BibTeX RDF	fold recognition, protein structure determination, energy minimization, protein threading, NMR