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Results
Found 16824 publication records. Showing 16824 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Rodrigo Fernandez-Gonzalez, Negar Balaghi, Kelly Wang, Ray Hawkins, Katheryn Rothenberg, Christopher McFaul, Clara Schimmer, Michelle Ly, Ana Maria do Carmo, Gordana Scepanovic, Gonca Erdemci-Tandogan, Veronica Castle |
PyJAMAS: open-source, multimodal segmentation and analysis of microscopy images.  |
Bioinform.  |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Erik N. Bergstrom, Mousumy Kundu, Noura Tbeileh, Ludmil B. Alexandrov |
Examining clustered somatic mutations with SigProfilerClusters. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Maria Llambrich, Eudald Correig, Josep Gumà, Jesús Brezmes, Raquel Cumeras |
Amanida: an R package for meta-analysis of metabolomics non-integral data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Kevin Mildau, Justin J. J. van der Hooft, Mira Flasch, Benedikt Warth, Yasin El Abiead, Gunda Koellensperger, Jürgen Zanghellini, Christoph Bueschl |
Homologue series detection and management in LC-MS data with homologueDiscoverer. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yue Hong, Pengyu Luo, Shuting Jin, Xiangrong Liu |
LaGAT: link-aware graph attention network for drug-drug interaction prediction. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ramón Viñas 0001, Helena Andrés-Terré, Pietro Liò, Kevin Bryson |
Adversarial generation of gene expression data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Laura Fancello, Alessandro Guida, Gianmaria Frige, Arnaud Céol, Gabriele Babini, Giovanni Luca Scaglione, Mario Zanfardino, Tommaso Mazza, Lorenzo Ferrando, Pier Giuseppe Pelicci, Luca Mazzarella |
TMBleR: a bioinformatic tool to optimize TMB estimation and predictive power. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Mete Akgün, Nico Pfeifer, Oliver Kohlbacher |
Efficient privacy-preserving whole-genome variant queries. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jim Shaw, Yun William Yu |
Theory of local k-mer selection with applications to long-read alignment. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Vincent Mallet, Carlos G. Oliver, Jonathan Broadbent, William L. Hamilton, Jérôme Waldispühl |
RNAglib: a python package for RNA 2.5 D graphs. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ran Yang, Alexandra M. Stendahl, Katinka A Vigh-Conrad, Madison Held, Ana C. Lima, Donald F. Conrad |
SATINN: an automated neural network-based classification of testicular sections allows for high-throughput histopathology of mouse mutants. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Emira Cherif, Fatou Seck Thiam, Mohammad Salma, Georgina Rivera-Ingraham, Fabienne Justy, Theo Deremarque, Damien Breugnot, Jean-Claude Doudou, Rodolphe E. Gozlan, Marine Combe |
ONTdeCIPHER: an amplicon-based nanopore sequencing pipeline for tracking pathogen variants. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Tao Sun, Mengci Li, Xiangtian Yu, Dandan Liang, Guoxiang Xie, Chao Sang, Wei Jia 0002, Tianlu Chen |
3MCor: an integrative web server for metabolome-microbiome-metadata correlation analysis. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Frantisek Malinka, Ashkan Zareie, Jan Procházka, Radislav Sedlacek, Vendula Novosadova |
Batch alignment via retention orders for preprocessing large-scale multi-batch LC-MS experiments. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Genis Bayarri, Pau Andrio, Adam Hospital, Modesto Orozco, Josep Lluis Gelpí |
BioExcel Building Blocks REST API (BioBB REST API), programmatic access to interoperable biomolecular simulation tools. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Florian Privé |
Using the UK Biobank as a global reference of worldwide populations: application to measuring ancestry diversity from GWAS summary statistics. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Hana Rozhonová, Daniel Danciu, Stefan Stark, Gunnar Rätsch, André Kahles, Kjong-Van Lehmann |
SECEDO: SNV-based subclone detection using ultra-low coverage single-cell DNA sequencing. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Bas Stringer, Hans de Ferrante, Sanne Abeln, Jaap Heringa, K. Anton Feenstra, Reza Haydarlou |
PIPENN: protein interface prediction from sequence with an ensemble of neural nets. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Vasileios Tsiamis, Veit Schwämmle |
VIQoR: a web service for visually supervised protein inference and protein quantification. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Christoph Bueschl, Maria Doppler, Elisabeth Varga, Bernhard Seidl, Mira Flasch, Benedikt Warth, Jürgen Zanghellini |
PeakBot: machine-learning-based chromatographic peak picking. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yiheng Zhu, Zhenqiu Ouyang, Wenbo Chen, Ruiwei Feng, Danny Z. Chen, Ji Cao, Jian Wu 0025 |
TGSA: protein-protein association-based twin graph neural networks for drug response prediction with similarity augmentation. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Huidong Liu, Tahsin Kurc |
Deep learning for survival analysis in breast cancer with whole slide image data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Surabhi Jagtap, Abdulkadir Çelikkanat, Aurélie Pirayre, Frédérique Bidard, Laurent Duval, Fragkiskos D. Malliaros |
BraneMF: integration of biological networks for functional analysis of proteins. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Laurence Legon, Christophe Corre, Declan G. Bates, Ahmad A. Mannan |
gcFront: a tool for determining a Pareto front of growth-coupled cell factory designs. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Eugenia Voytik, Isabell Bludau, Sander Willems, Fynn M. Hansen, Andreas-David Brunner, Maximilian T. Strauss, Matthias Mann |
AlphaMap: an open-source Python package for the visual annotation of proteomics data with sequence-specific knowledge. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Amirhossein Sakhteman, Arindam Ghosh, Vittorio Fortino |
EDTox: an R Shiny application to predict the endocrine disruption potential of compounds. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Martin Hunt, Jeremy Swann, Bede Constantinides, Philip Fowler, Zamin Iqbal |
ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Marcell Szikszai, Michael J. Wise, Amitava Datta, Max Ward 0001, David H. Mathews |
Deep learning models for RNA secondary structure prediction (probably) do not generalize across families. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yupei You, Michael B. Clark, Heejung Shim |
NanoSplicer: accurate identification of splice junctions using Oxford Nanopore sequencing. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Lea Gütebier, Tim Bleimehl, Ron Henkel, Jamie Munro, Sebastian Müller, Axel Morgner, Jakob Laenge, Anke Pachauer, Alexander Erdl, Jens Weimar, Kirsten Walther Langendorf, Vincent Vialard, Thorsten Liebig, Martin Preusse, Dagmar Waltemath, Alexander Jarasch |
CovidGraph: a graph to fight COVID-19. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Vinzenz May, Leonard Koch, Björn Fischer-Zirnsak, Denise Horn, Petra Gehle, Uwe Kornak, Dieter Beule, Manuel Holtgrewe |
ClearCNV: CNV calling from NGS panel data in the presence of ambiguity and noise. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Nicolas Enjalbert-Courrech, Pierre Neuvial |
Powerful and interpretable control of false discoveries in two-group differential expression studies. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Thomas Krannich, W. Timothy J. White, Sebastian Niehus, Guillaume Holley, Bjarni V. Halldórsson, Birte Kehr |
Population-scale detection of non-reference sequence variants using colored de Bruijn graphs. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yuanqi Du, Xiaojie Guo 0002, Yinkai Wang, Amarda Shehu, Liang Zhao 0002 |
Small molecule generation via disentangled representation learning. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Florence Jornod, Thomas Jaylet, Ludek Bláha, Denis Sarigiannis, Luc Tamisier, Karine Audouze |
AOP-helpFinder webserver: a tool for comprehensive analysis of the literature to support adverse outcome pathways development. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Palash Pandey, Sanjeevani Arora, Gail L. Rosen |
MetaMutationalSigs: comparison of mutational signature refitting results made easy. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Francesco P. Panei, Rachel Torchet, Hervé Ménager, Paraskevi Gkeka, Massimiliano Bonomi |
HARIBOSS: a curated database of RNA-small molecules structures to aid rational drug design. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Damla Ovek, Ameer Taweel, Zeynep Abali, Ece Tezsezen, Yunus Emre Koroglu, Chung-Jung Tsai, Ruth Nussinov, Ozlem Keskin, Attila Gürsoy |
SARS-CoV-2 Interactome 3D: A Web interface for 3D visualization and analysis of SARS-CoV-2-human mimicry and interactions. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yuhao Chen, Yanshi Hu, Xiaotian Hu, Cong Feng, Ming Chen 0005 |
CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiajie Wei, Jiayi Dong, Fei Wang 0017 |
scPreGAN, a deep generative model for predicting the response of single-cell expression to perturbation. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Pasquale Cascarano, Maria Colomba Comes, Andrea Sebastiani, Arianna Mencattini, Elena Loli Piccolomini, Eugenio Martinelli |
DeepCEL0 for 2D single-molecule localization in fluorescence microscopy. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yan Ding, Xiaoqian Jiang, Yejin Kim |
Relational graph convolutional networks for predicting blood-brain barrier penetration of drug molecules. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael Mayers, Roger Tu, Dylan Steinecke, Tong Shu Li, Núria Queralt-Rosinach, Andrew I. Su |
Design and application of a knowledge network for automatic prioritization of drug mechanisms. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Michele Leone, Eugenia Galeota, Marco Masseroli, Mattia Pelizzola |
Identification, semantic annotation and comparison of combinations of functional elements in multiple biological conditions. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Parthajit Roy, Dhananjay Bhattacharyya |
MetBP: a software tool for detection of interaction between metal ion-RNA base pairs. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Haotian Teng, Ye Yuan, Ziv Bar-Joseph |
Clustering spatial transcriptomics data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Alissa L. Severson, Thorfinn Sand Korneliussen, Ida Moltke |
LocalNgsRelate: a software tool for inferring IBD sharing along the genome between pairs of individuals from low-depth NGS data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Malte Rühlemann, Eike Matthias Wacker, David Ellinghaus, Andre Franke |
MAGScoT: a fast, lightweight and accurate bin-refinement tool. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Shixiang Wang, Yi Xiong, Longfei Zhao, Kai Gu, Yin Li, Fei Zhao, Jianfeng Li, Mingjie Wang, Haitao Wang, Ziyu Tao, Tao Wu, Yichao Zheng, Xuejun Li, Xue-Song Liu |
UCSCXenaShiny: an R/CRAN package for interactive analysis of UCSC Xena data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Dehan Cai, Yanni Sun |
Reconstructing viral haplotypes using long reads. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Satwik Acharyya, Xiang Zhou, Veerabhadran Baladandayuthapani |
SpaceX: gene co-expression network estimation for spatial transcriptomics. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Raphael Sonabend, Andreas Bender 0001, Sebastian J. Vollmer |
Avoiding C-hacking when evaluating survival distribution predictions with discrimination measures. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Brendon H. Cooper, Tsu-Pei Chiu, Remo Rohs |
Top-Down Crawl: a method for the ultra-rapid and motif-free alignment of sequences with associated binding metrics. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jie Wang 0061, Nazia Tabassum, Tanjin Taher Toma, Yibo Wang, Andreas Gahlmann, Scott T. Acton |
3D GAN image synthesis and dataset quality assessment for bacterial biofilm. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexander M. Waldrop, John B. Cheadle, Kira Bradford, Alexander Preiss, Robert F. Chew, Jonathan R. Holt, Yaphet Kebede, Nathan Braswell, Matthew Watson, Virginia Hench, Andrew Crerar, Chris M. Ball, Carl Schreep, P. J. Linebaugh, Hannah Hiles, Rebecca R. Boyles, Chris Bizon, Ashok Kumar Krishnamurthy, Steven Cox 0001 |
Dug: a semantic search engine leveraging peer-reviewed knowledge to query biomedical data repositories. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yang Li 0130, Guanyu Qiao, Xin Gao 0001, Guohua Wang |
Supervised graph co-contrastive learning for drug-target interaction prediction. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexander Cope, Felicity Anderson, John Favate, Michael Jackson, Amanda Mok, Anna Kurowska, Junchen Liu, Emma Mackenzie, Vikram Shivakumar, Peter Tilton, Sophie M. Winterbourne, Siyin Xue, Kostas Kavoussanakis, Liana F. Lareau, Premal Shah, Edward W. J. Wallace |
riboviz 2: a flexible and robust ribosome profiling data analysis and visualization workflow. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Itsuki Sugita, Shohei Matsuyama, Hiroki Dobashi, Daisuke Komura, Shumpei Ishikawa |
Viola: a structural variant signature extractor with user-defined classifications. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Lei Deng 0002, Yibiao Huang, Xuejun Liu, Hui Liu 0026 |
Graph2MDA: a multi-modal variational graph embedding model for predicting microbe-drug associations. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Nadav Brandes, Dan Ofer, Yam Peleg, Nadav Rappoport, Michal Linial |
ProteinBERT: a universal deep-learning model of protein sequence and function. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | M. Michael Gromiha, Christine A. Orengo, Ramanathan Sowdhamini, Janet M. Thornton |
Srinivasan (1962-2021) in Bioinformatics and beyond. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Nikola Benes, Lubos Brim, Ondrej Huvar, Samuel Pastva, David Safránek, Eva Smijáková |
AEON.py: Python library for attractor analysis in asynchronous Boolean networks. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yongwen Zhuang, Brooke N. Wolford, Kisung Nam, Wenjian Bi, Wei Zhou, Cristen J. Willer, Bhramar Mukherjee, Seunggeun Lee |
Incorporating family disease history and controlling case-control imbalance for population-based genetic association studies. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yan Li, Lijun Quan, Yiting Zhou, Yelu Jiang, Kailong Li, Tingfang Wu, Qiang Lyu |
Identifying modifications on DNA-bound histones with joint deep learning of multiple binding sites in DNA sequence. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Gabriela Alejandra Merino, Rabie Saidi, Diego H. Milone, Georgina Stegmayer, Maria Jesus Martin |
Hierarchical deep learning for predicting GO annotations by integrating protein knowledge. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Niels Johan Christensen, Samuel Demharter, Meera Vieira Machado, Lykke Pedersen, Marco Salvatore, Valdemar Stentoft-Hansen, Miquel Triana Iglesias |
Identifying interactions in omics data for clinical biomarker discovery using symbolic regression. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | David Buterez, Ioana Bica, Ifrah Tariq, Helena Andrés-Terré, Pietro Liò |
CellVGAE: an unsupervised scRNA-seq analysis workflow with graph attention networks. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Aron Park, Minjae Joo, Kyungdoc Kim, Won-Joon Son, Gyutae Lim, Jinhyuk Lee, Jung Ho Kim, Dae Ho Lee, Seungyoon Nam |
A comprehensive evaluation of regression-based drug responsiveness prediction models, using cell viability inhibitory concentrations (IC50 values). |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | |
Correction to: plotsr: visualizing structural similarities and rearrangements between multiple genomes. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Chaoyu Zhu, Zhihao Yang, Xiaoqiong Xia, Nan Li, Fan Zhong, Lei Liu |
Multimodal reasoning based on knowledge graph embedding for specific diseases. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Zhong Chen 0003, You Lu, Bo Cao, Wensheng Zhang 0005, Andrea Edwards, Kun Zhang 0012 |
Driver gene detection through Bayesian network integration of mutation and expression profiles. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Dandan Sun, Shaozhen Ding, Pengli Cai, Dachuan Zhang, Mengying Han, Qian-Nan Hu |
BioBulkFoundary: a customized webserver for exploring biosynthetic potentials of bulk chemicals. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Kuangnan Fang, Rui Ren, Qingzhao Zhang, Shuangge Ma |
iSFun: an R package for integrative dimension reduction analysis. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Ammar Qaseem, Stefan Günther |
CPRiL: compound-protein relationships in literature. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Layla Aref, Lisa Bastarache, Jacob J. Hughey |
The phers R package: using phenotype risk scores based on electronic health records to study Mendelian disease and rare genetic variants. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Feng Zhou, Adam S. Butterworth, Jennifer L. Asimit |
Flashfm-ivis: interactive visualization for fine-mapping of multiple quantitative traits. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Quinn Dickinson, Andreas Aufschnaiter, Martin Ott, Jesse G. Meyer |
Multi-omic integration by machine learning (MIMaL). |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Tianying Wang, Wodan Ling, Anna M. Plantinga, Michael C. Wu, Xiang Zhan |
Testing microbiome association using integrated quantile regression models. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Hongjia Li, Hui Zhang, Xiaohua Wan, Zhidong Yang, Chengmin Li, Jintao Li 0001, Renmin Han, Ping Zhu, Fa Zhang 0001 |
Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Sam F. L. Windels, Noël Malod-Dognin, Natasa Przulj |
Identifying cellular cancer mechanisms through pathway-driven data integration. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Kishlay Jha, Aidong Zhang |
Continual knowledge infusion into pre-trained biomedical language models. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Carsten Henneges, Joseph N. Paulson |
GameRank: R package for feature selection and construction. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Galina Boldina, Paul Fogel, Corinne Rocher, Charles Bettembourg, George Luta, Franck Augé |
A2Sign: Agnostic Algorithms for Signatures - a universal method for identifying molecular signatures from transcriptomic datasets prior to cell-type deconvolution. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Marcos A. Caraballo-Ortiz, Sayaka Miura, Maxwell D. Sanderford, Tenzin Dolker, Qiqing Tao, Steven Weaver, Sergei L. Kosakovsky Pond, Sudhir Kumar 0001 |
TopHap: rapid inference of key phylogenetic structures from common haplotypes in large genome collections with limited diversity. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Quanzhong Liu, Honglin Fang, Xiao Wang, Miao Wang, Shuqin Li, Lachlan J. M. Coin, Fuyi Li, Jiangning Song |
DeepGenGrep: a general deep learning-based predictor for multiple genomic signals and regions. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Priya Tiwary, Akshayraj Madhubalan, Amit Gautam |
No means 'No': a non-improper modeling approach, with embedded speculative context. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jun Li, Sicheng Zhang, Dong Zhang, Shi-Jie Chen |
Vfold-Pipeline: a web server for RNA 3D structure prediction from sequences. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jinge Yu, Xiangyu Luo |
Identification of cell-type-specific spatially variable genes accounting for excess zeros. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Vincent Wagner, Benjamin Castellaz, Marco Oesting, Nicole Radde |
Quasi-Entropy Closure: a fast and reliable approach to close the moment equations of the Chemical Master Equation. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiao Wang, Jia Wang, Han Zhang 0017, Shenwei Huang, Yanbin Yin |
HDMC: a novel deep learning-based framework for removing batch effects in single-cell RNA-seq data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yu Wei, Shanshan Li, Zhonglin Li, Ziwei Wan, Jianping Lin |
Interpretable-ADMET: a web service for ADMET prediction and optimization based on deep neural representation. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Jonathan R. Bowles, Caroline Hoppe, Hilary L. Ashe, Magnus Rattray |
Scalable inference of transcriptional kinetic parameters from MS2 time series data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Sebastian Stammler, Tobias Kussel, Phillipp Schoppmann, Florian Stampe, Galina Tremper, Stefan Katzenbeisser 0001, Kay Hamacher, Martin Lablans |
Mainzelliste SecureEpiLinker (MainSEL): privacy-preserving record linkage using secure multi-party computation. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaohan Xing, Fan Yang 0081, Hang Li, Jun Zhang 0018, Yu Zhao 0009, Mingxuan Gao, Junzhou Huang, Jianhua Yao 0001 |
Multi-level attention graph neural network based on co-expression gene modules for disease diagnosis and prognosis. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Thomas Naake, Wolfgang Huber |
MatrixQCvis: shiny-based interactive data quality exploration for omics data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Cecilia Sensalari, Steven Maere, Rolf Lohaus |
ksrates: positioning whole-genome duplications relative to speciation events in KS distributions. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Yonghui Dong, Yana Kazachkova, Meng Gou, Liat Morgan, Tal Wachsman, Ehud Gazit, Rune Isak Dupont Birkler |
RawHummus: an R Shiny app for automated raw data quality control in metabolomics. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
|
| 1 | Itunu G. Osuntoki, Andrew Harrison, Hongsheng Dai, Yanchun Bao, Nicolae Radu Zabet |
ZipHiC: a novel Bayesian framework to identify enriched interactions and experimental biases in Hi-C data. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
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| 1 | Serhan Yilmaz, Mohamad Fakhouri, Mehmet Koyutürk, A. Ercüment Çiçek, Öznur Tastan |
Uncovering complementary sets of variants for predicting quantitative phenotypes. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
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| 1 | Adriano Luca Martinelli, Maria Anna Rapsomaniki |
ATHENA: analysis of tumor heterogeneity from spatial omics measurements. |
Bioinform. |
2022 |
DBLP DOI BibTeX RDF |
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