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Results
Found 16824 publication records. Showing 16824 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Dmitry Meleshko, Iman Hajirasouliha, Anton I. Korobeynikov |
coronaSPAdes: from biosynthetic gene clusters to RNA viral assemblies.  |
Bioinform.  |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Mu Gao, Jeffrey Skolnick |
A novel sequence alignment algorithm based on deep learning of the protein folding code. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Scott Van Buren, Hirak Sarkar, Avi Srivastava, Naim U. Rashid, Rob Patro, Michael I. Love |
Compression of quantification uncertainty for scRNA-seq counts. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Johann F. Jadebeck, Axel Theorell, Samuel Leweke, Katharina Nöh |
HOPS: high-performance library for (non-)uniform sampling of convex-constrained models. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Mengyang Xu, Lidong Guo, Xiao Du, Lei Li, Brock A. Peters, Li Deng, Ou Wang, Fang Chen, Jun Wang, Zhesheng Jiang, Jinglin Han, Ming Ni, Huanming Yang, Xun Xu, Xin Liu, Jie Huang 0026, Guangyi Fan |
Accurate haplotype-resolved assembly reveals the origin of structural variants for human trios. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Louis Becquey, Eric Angel, Fariza Tahi |
RNANet: an automatically built dual-source dataset integrating homologous sequences and RNA structures. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Luigi Grassi, Claire L. Harris, Jie Zhu, Colin Hardman, Diane Hatton |
DetectIS: a pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Gubbi Vani HarshaRani, S. Moza, Naren Ramakrishnan, Upinder S. Bhalla |
SWITCHES: Searchable Web Interface for Topologies of CHEmical Switches. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Vivek Kohar, Danya Gordin, Ataur Katebi, Herbert Levine, José N. Onuchic, Mingyang Lu |
Gene Circuit Explorer (GeneEx): an interactive web-app for visualizing, simulating and analyzing gene regulatory circuits. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Roy González-Alemán, Daniel Platero-Rochart, David Hernández-Castillo, Erix Wiliam Hernández-Rodríguez, Julio Caballero, Fabrice Leclerc, Luis Alberto Montero-Cabrera |
BitQT: a graph-based approach to the quality threshold clustering of molecular dynamics. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Vishnu Shankar, Robert Tibshirani, Richard N. Zare |
MassExplorer: a computational tool for analyzing desorption electrospray ionization mass spectrometry data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Chen Cao, Matthew Greenberg, Quan Long |
WgLink: reconstructing whole-genome viral haplotypes using L0+L1-regularization. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Renmin Han, Lun Li, Peng Yang 0010, Fa Zhang 0001, Xin Gao 0001 |
A novel constrained reconstruction model towards high-resolution subtomogram averaging. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Thomas Haschka, Loïc Ponger, Christophe Escudé, Julien Mozziconacci |
MNHN-Tree-Tools: a toolbox for tree inference using multi-scale clustering of a set of sequences. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Evin M. Padhi, Jeffrey K. Ng, Elvisa Mehinovic, Eleanor I Sams, Tychele Turner |
ACES: Analysis of Conservation with an Extensive list of Species. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yanan Wang 0003, Nicolas Coudray, Yun Zhao, Fuyi Li, Changyuan Hu, Yao-Zhong Zhang, Seiya Imoto, Aristotelis Tsirigos, Geoffrey I. Webb, Roger J. Daly, Jiangning Song |
HEAL: an automated deep learning framework for cancer histopathology image analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Javier Pardo-Diaz, Lyuba V. Bozhilova, Mariano Beguerisse-Díaz, Philip S. Poole, Charlotte M. Deane, Gesine Reinert |
Robust gene coexpression networks using signed distance correlation. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Dillon Aberasturi, Nima Pouladi, Samir Rachid Zaim, Colleen Kenost, Joanne Berghout, Walter W. Piegorsch, Yves A. Lussier |
'Single-subject studies'-derived analyses unveil altered biomechanisms between very small cohorts: implications for rare diseases. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Bowen Dai, Chris Bailey-Kellogg |
Protein interaction interface region prediction by geometric deep learning. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Shengquan Chen, Boheng Zhang, Xiaoyang Chen, Xuegong Zhang, Rui Jiang 0001 |
stPlus: a reference-based method for the accurate enhancement of spatial transcriptomics. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Wei Zhang, Lei Wei, Jiaqi Huang, Bixi Zhong, Jiaqi Li, Hanwen Xu, Shuying He, Yu Liu, Juhong Liu, Hairong Lv, Xiaowo Wang |
cfDNApipe: a comprehensive quality control and analysis pipeline for cell-free DNA high-throughput sequencing data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Khandakar Tanvir Ahmed, Jiao Sun, Sze Cheng, Jeongsik Yong, Wei Zhang 0076 |
Multi-omics data integration by generative adversarial network. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Zihan Cui, Yuhang Liu, Jinfeng Zhang, Xing Qiu |
Super-delta2: an enhanced differential expression analysis procedure for multi-group comparisons of RNA-seq data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Hangyuan Yang, Minghui Wang, Xia Liu, Xing-Ming Zhao, Ao Li 0001 |
PhosIDN: an integrated deep neural network for improving protein phosphorylation site prediction by combining sequence and protein-protein interaction information. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Dominik Schwarz, Guy Georges, Sebastian Kelm, Jiye Shi, Anna Vangone, Charlotte M. Deane |
Co-evolutionary distance predictions contain flexibility information. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Friedrich Preusser, Natália dos Santos, Jörg Contzen, Harald Stachelscheid, Érico Tosoni Costa, Philipp Mergenthaler, Stephan Preibisch |
FRC-QE: a robust and comparable 3D microscopy image quality metric for cleared organoids. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yukiteru Ono, Kiyoshi Asai, Michiaki Hamada |
PBSIM2: a simulator for long-read sequencers with a novel generative model of quality scores. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Arthur M. Lesk, Arun Siddharth Konagurthu |
Neighbourhoods in the yeast regulatory network in different physiological states. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Christiana N. Fogg, Diane E. Kovats, Ron Shamir |
2020 ISCB Innovatory Award: Xiaole Shirley Liu. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Wei Huang, Ping Zheng, Zhenhai Cui, Zhuo Li, Yifeng Gao, Helong Yu, You Tang, Xiaohui Yuan, Zhiwu Zhang 0001 |
MMAP: a cloud computing platform for mining the maximum accuracy of predicting phenotypes from genotypes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaofeng Zhu 0003, Xiaoyin Li, Rong Xu, Tao Wang |
An iterative approach to detect pleiotropy and perform Mendelian Randomization analysis using GWAS summary statistics. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Irzam Sarfraz, Muhammad Asif 0002, Joshua D. Campbell |
ExperimentSubset: an R package to manage subsets of Bioconductor Experiment objects. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Erin K. Molloy, Arun Durvasula, Sriram Sankararaman |
Advancing admixture graph estimation via maximum likelihood network orientation. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Mustafa Coskun, Mehmet Koyutürk |
Node similarity-based graph convolution for link prediction in biological networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Tilman Hinnerichs, Robert Hoehndorf |
DTI-Voodoo: machine learning over interaction networks and ontology-based background knowledge predicts drug-target interactions. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Weiguang Mao, Javad Rahimikollu, Ryan Hausler, Maria Chikina |
DataRemix: a universal data transformation for optimal inference from gene expression datasets. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Lucille Lopez-Delisle, Leily Rabbani, Joachim Wolff, Vivek Bhardwaj, Rolf Backofen, Björn A. Grüning, Fidel Ramírez, Thomas Manke |
pyGenomeTracks: reproducible plots for multivariate genomic datasets. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Omid Bazgir, Souparno Ghosh, Ranadip Pal |
Investigation of REFINED CNN ensemble learning for anti-cancer drug sensitivity prediction. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Hongyi Duanmu, Fusheng Wang 0001, George Teodoro, Jun Kong |
Foveal blur-boosted segmentation of nuclei in histopathology images with shape prior knowledge and probability map constraints. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Daniele Raimondi, Jaak Simm, Adam Arany, Yves Moreau |
A novel method for data fusion over entity-relation graphs and its application to protein-protein interaction prediction. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Joachim Wolff, Nezar Abdennur, Rolf Backofen, Björn A. Grüning |
Scool: a new data storage format for single-cell Hi-C data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Zulfat Miftahutdinov, Artur Kadurin, Roman Kudrin, Elena Tutubalina |
Medical concept normalization in clinical trials with drug and disease representation learning. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Elliott Gordon-Rodríguez, Thomas P. Quinn, John P. Cunningham |
Learning sparse log-ratios for high-throughput sequencing data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Johannes Smolander, Sini Junttila, Mikko S. Venäläinen, Laura L. Elo |
ILoReg: a tool for high-resolution cell population identification from single-cell RNA-seq data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Claire Marks, Alissa M. Hummer, Mark Chin, Charlotte M. Deane |
Humanization of antibodies using a machine learning approach on large-scale repertoire data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jaeho Jeong, Seong-Joon Park, Jae-Won Kim, Jong-Seon No, Ha Hyeon Jeon, Jeong Wook Lee, Albert No, Sunghwan Kim 0001, Hosung Park |
Cooperative sequence clustering and decoding for DNA storage system with fountain codes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jirí Hon, Martin Marusiak, Tomás Martínek, Antonin Kunka, Jaroslav Zendulka, David Bednar, Jirí Damborský |
SoluProt: prediction of soluble protein expression in Escherichia coli. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Patrick Adelberger, Klaus Eckelt, Markus J. Bauer, Marc Streit, Christian Haslinger, Thomas Zichner |
Coral: a web-based visual analysis tool for creating and characterizing cohorts. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Anand Mayakonda, Maximilian Schönung, Joschka Hey, Rajbir Nath Batra, Clarissa Feuerstein-Akgoz, Kristin Köhler, Daniel B. Lipka, Rocio Sotillo, Christoph Plass, Pavlo Lutsik, Reka Toth |
Methrix: an R/Bioconductor package for systematic aggregation and analysis of bisulfite sequencing data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Travis N. Mavrich, Christian Gauthier, Lawrence Abad, Charles A. Bowman, Steven G. Cresawn, Graham F. Hatfull |
pdm_utils: a SEA-PHAGES MySQL phage database management toolkit. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Constantin Ahlmann-Eltze, Wolfgang Huber |
glmGamPoi: fitting Gamma-Poisson generalized linear models on single cell count data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jan P. Buchmann, Edward C. Holmes |
Collecting and managing taxonomic data with NCBI-taxonomist. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Omer Sabary, Yoav Orlev, Roy Shafir, Leon Anavy, Eitan Yaakobi, Zohar Yakhini |
SOLQC: Synthetic Oligo Library Quality Control tool. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Anthony Westbrook, Elizabeth Varki, W. Kelley Thomas |
RepeatFS: a file system providing reproducibility through provenance and automation. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Anushua Biswas, Leelavati Narlikar |
Resolving diverse protein-DNA footprints from exonuclease-based ChIP experiments. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Priyesh Agrawal, Debasisa Mohanty |
A machine learning-based method for prediction of macrocyclization patterns of polyketides and non-ribosomal peptides. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Maria Littmann, Nicola Bordin, Michael Heinzinger, Konstantin Schütze, Christian Dallago, Christine A. Orengo, Burkhard Rost |
Clustering FunFams using sequence embeddings improves EC purity. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Dhaivat Joshi, Shunfu Mao, Sreeram Kannan, Suhas N. Diggavi |
QAlign: aligning nanopore reads accurately using current-level modeling. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaolong Cao, Jinchuan Xing |
PrecisionProDB: improving the proteomics performance for precision medicine. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Victor Alexandre Padilha, Omer S. Alkhnbashi, Van Dinh Tran, Shiraz A. Shah, André C. P. L. F. de Carvalho, Rolf Backofen |
Casboundary: automated definition of integral Cas cassettes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Anja Mösch, Dmitrij Frishman |
TCRpair: prediction of functional pairing between HLA-A*02: 01-restricted T-cell receptor α and β chains. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yan Gao, Yongzhuang Liu, Yanmei Ma, Bo Liu 0023, Yadong Wang, Yi Xing |
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Timothy L. Bailey |
STREME: accurate and versatile sequence motif discovery. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yixin Guo, Ziwei Xue, Ruihong Yuan, Jingyi Jessica Li, William A. Pastor, Wanlu Liu |
RAD: a web application to identify region associated differentially expressed genes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Joan Segura, Yana Rose, John D. Westbrook, Stephen K. Burley, Jose M. Duarte |
RCSB Protein Data Bank 1D tools and services. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Zhiye Guo, Tianqi Wu, Jian Liu, Jie Hou 0001, Jianlin Cheng |
Improving deep learning-based protein distance prediction in CASP14. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Lisha Ye, Peikun Wu, Zhenling Peng, Jianzhao Gao, Jian Liu, Jianyi Yang |
Improved estimation of model quality using predicted inter-residue distance. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Mohammad Hallal, Mariette Awad, Pierre H. Khoueiry |
TempoMAGE: a deep learning framework that exploits the causal dependency between time-series data to predict histone marks in open chromatin regions at time-points with missing ChIP-seq datasets. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jianwei Hong, Ruitian Gao, Yang Yang 0030 |
CrepHAN: cross-species prediction of enhancers by using hierarchical attention networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jordan M. Eizenga, Adam M. Novak, Emily Kobayashi, Flavia Villani, Cecilia Cisar, Simon Heumos, Glenn Hickey, Vincenza Colonna, Benedict Paten, Erik Garrison |
Efficient dynamic variation graphs. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Siddharth Annaldasula, Martyna Gajos, Andreas Mayer |
IsoTV: processing and visualizing functional features of translated transcript isoforms. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Richard H. Adams, Todd A. Castoe, Michael Degiorgio |
PhyloWGA: chromosome-aware phylogenetic interrogation of whole genome alignments. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yang Zhang, Tianyuan Liu, Jing Wang 0004, Bohao Zou, Le Li, Linhui Yao, Kechen Chen, Lin Ning, Bingyi Wu, Xiaoyang Zhao, Dong Wang 0011 |
Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Diogo B. Lima, Mathieu Dupré, Magalie Duchateau, Quentin Giai Gianetto, Martial Rey, Mariette Matondo, Julia Chamot-Rooke |
ProteoCombiner: integrating bottom-up with top-down proteomics data for improved proteoform assessment. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jie-Huei Wang, Yi-Hau Chen |
Network-adjusted Kendall's Tau Measure for Feature Screening with Application to High-dimensional Survival Genomic Data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Payam Dibaeinia, Shayan Tabe-Bordbar, Tandy J. Warnow |
FASTRAL: improving scalability of phylogenomic analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Deniz Seçilmis, Thomas Hillerton, Sven Nelander, Erik L. L. Sonnhammer |
Inferring the experimental design for accurate gene regulatory network inference. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Lewis Moffat, David T. Jones |
Increasing the accuracy of single sequence prediction methods using a deep semi-supervised learning framework. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Maya Gupta, Paul Zaharias, Tandy J. Warnow |
Accurate large-scale phylogeny-aware alignment using BAli-Phy. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Filip Ljung, Ingemar André |
ZEAL: protein structure alignment based on shape similarity. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Arnab Mallik, Lucian Ilie |
ALeS: adaptive-length spaced-seed design. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Sisheng Liu, Jinpeng Liu, Yanqi Xie, Tingting Zhai, Eugene W. Hinderer, Arnold J. Stromberg, Nathan L. Vanderford, Jill M. Kolesar, Hunter N. B. Moseley, Li Chen, Chunming Liu, Chi Wang 0003 |
MEScan: a powerful statistical framework for genome-scale mutual exclusivity analysis of cancer mutations. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Benjamin J. M. Tremblay, Briallen Lobb, Andrew C. Doxey |
PhyloCorrelate: inferring bacterial gene-gene functional associations through large-scale phylogenetic profiling. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Sabrina Rashid, Sohrab Shah, Ziv Bar-Joseph, Ravi Pandya |
Dhaka: variational autoencoder for unmasking tumor heterogeneity from single cell genomic data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Miguel D. Fernández-de-Bobadilla, Alba Talavera-Rodríguez, Lucía Chacón, Fernando Baquero, Teresa M. Coque, Val F. Lanza |
PATO: Pangenome Analysis Toolkit. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Quanxue Li, Wentao Dai, Jixiang Liu, Qingqing Sang, Yi-Xue Li, Yuan-Yuan Li |
DysRegSig: an R package for identifying gene dysregulations and building mechanistic signatures in cancer. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Heng Li 0002, Jiazhen Rong |
Bedtk: finding interval overlap with implicit interval tree. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Justine C. Williams, Subha Kalyaanamoorthy |
PoseFilter: a PyMOL plugin for filtering and analyzing small molecule docking in symmetric binding sites. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Krzysztof Szczepaniak, Adriana Bukala, Antonio Marinho da Silva Neto, Jan Ludwiczak, Stanislaw Dunin-Horkawicz |
A library of coiled-coil domains: from regular bundles to peculiar twists. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ahsan Sanaullah, Degui Zhi, Shaojie Zhang |
d-PBWT: dynamic positional Burrows-Wheeler transform. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Daniel Osório 0004, James J. Cai |
Systematic determination of the mitochondrial proportion in human and mice tissues for single-cell RNA-sequencing data quality control. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jiuxing Liang, Zifeng Cui, Canbiao Wu, Yao Yu, Rui Tian, Hongxian Xie, Zhuang Jin, Weiwen Fan, Weiling Xie, Zhaoyue Huang, Wei Xu, Jingjing Zhu, Zeshan You, Xiaofang Guo, Xiaofan Qiu, Jiahao Ye, Bin Lang, Mengyuan Li, Songwei Tan, Zheng Hu |
DeepEBV: a deep learning model to predict Epstein-Barr virus (EBV) integration sites. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Virginie Lollier, Mathieu Fanuel, David Ropartz, Dominique Tessier, Hélène Rogniaux |
Oligator: a flexible interface to draw oligosaccharide structures and generate their theoretical tandem mass spectra. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Hélène Borges, Anne-Marie Hesse, Alexandra Kraut, Yohann Couté, Virginie Brun, Thomas Burger |
Well Plate Maker: a user-friendly randomized block design application to limit batch effects in large-scale biomedical studies. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Matthew I. J. Raybould, Aleksandr Kovaltsuk, Claire Marks, Charlotte M. Deane |
CoV-AbDab: the coronavirus antibody database. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Benjamin Linard, Nikolai Romashchenko, Fabio Pardi, Eric Rivals |
PEWO: a collection of workflows to benchmark phylogenetic placement. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Neng Huang, Fan Nie, Peng Ni, Feng Luo 0001, Xin Gao 0001, Jianxin Wang 0001 |
NeuralPolish: a novel Nanopore polishing method based on alignment matrix construction and orthogonal Bi-GRU Networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Song-Yao Zhang, Shaowu Zhang 0001, Yujiao Tang, Xiaonan Fan 0001, Jia Meng |
Funm6AViewer: a web server and R package for functional analysis of context-specific m6A RNA methylation. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Norberto Sánchez-Cruz, José L. Medina-Franco, Jordi Mestres, Xavier Barril |
Extended connectivity interaction features: improving binding affinity prediction through chemical description. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yang Young Lu, Jeff A. Bilmes, Ricard A. Rodriguez-Mias, Judit Villén, William Stafford Noble |
DIAmeter: matching peptides to data-independent acquisition mass spectrometry data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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