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Results
Found 16824 publication records. Showing 16824 according to the selection in the facets
| Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
| 1 | Maria Suprun, Randall J. Ellis, Hugh A. Sampson, Mayte Suárez-Fariñas |
bbeaR: an R package and framework for epitope-specific antibody profiling.  |
Bioinform.  |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Tiago Olivoto, Maicon Nardino |
MGIDI: toward an effective multivariate selection in biological experiments. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Vyacheslav Tretyachenko, Václav Vorácek, Radko Soucek, Kosuke Fujishima, Klára Hlouchová |
CoLiDe: Combinatorial Library Design tool for probing protein sequence space. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Phuc-Loi Luu, Phuc-Thinh Ong, Tran Thai Huu Loc, Dilys Lam, Ruth Pidsley, Clare Stirzaker, Susan J. Clark |
MethPanel: a parallel pipeline and interactive analysis tool for multiplex bisulphite PCR sequencing to assess DNA methylation biomarker panels for disease detection. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | M. A. Kühl, B. Stich, D. C. Ries |
Mutation-Simulator: fine-grained simulation of random mutations in any genome. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Tiansheng Zhu, Hao Chen, Xishan Yan, Zhicheng Wu, Xiaoxu Zhou, Qi Xiao, Weigang Ge, Qiushi Zhang, Chao Xu, Luang Xu, Guan Ruan, Zhangzhi Xue, Chunhui Yuan, Guo-Bo Chen, Tiannan Guo |
ProteomeExpert: a Docker image-based web server for exploring, modeling, visualizing and mining quantitative proteomic datasets. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Hyun-Myung Woo, Byung-Jun Yoon |
MONACO: accurate biological network alignment through optimal neighborhood matching between focal nodes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Beatriz García Jiménez, Jorge Muñoz, Sara Cabello, Joaquín Medina, Mark D. Wilkinson |
Predicting microbiomes through a deep latent space. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Chayan Kumar Saha, Rodrigo Sanches Pires, Harald Brolin, Maxence Delannoy, Gemma Catherine Atkinson |
FlaGs and webFlaGs: discovering novel biology through the analysis of gene neighbourhood conservation. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Marne C. Hagemeijer, Annelotte M. Vonk, Nikhil T. Awatade, Iris A. L. Silva, Christian Tischer 0001, Volker Hilsenstein, Jeffrey M. Beekman, Margarida D. Amaral, Hugo M. Botelho |
An open-source high-content analysis workflow for CFTR function measurements using the forskolin-induced swelling assay. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | James Shiniti Nagai, Nils B. Leimkühler, Michael T. Schaub, Rebekka K. Schneider, Ivan G. Costa |
CrossTalkeR: analysis and visualization of ligand-receptorne tworks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Diogo Pratas, Jorge Miguel Silva |
Persistent minimal sequences of SARS-CoV-2. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Mateusz Kudla, Kaja Gutowska, Jaroslaw Synak, Mirko Weber, Katrin Sophie Bohnsack, Piotr Lukasiak, Thomas Villmann, Jacek Blazewicz, Marta Szachniuk |
Virxicon: a lexicon of viral sequences. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | A. K. M. Firoj Mahmud, Nicolas Delhomme, Soumyadeep Nandi, Maria Fällman |
ProkSeq for complete analysis of RNA-Seq data from prokaryotes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Evgeny S. Zhvansky, Anatoly A. Sorokin, Denis S. Bormotov, Konstantin V. Bocharov, Denis S. Zavorotnyuk, Daniil G. Ivanov, Eugene N. Nikolaev, Igor A. Popov |
The software for interactive evaluation of mass spectra stability and reproducibility. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Susana Posada-Céspedes, David Seifert, Ivan Topolsky, Kim Philipp Jablonski, Karin J. Metzner, Niko Beerenwinkel |
V-pipe: a computational pipeline for assessing viral genetic diversity from high-throughput data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ivana Hutarová Vareková, Jan Hutar, Adam Midlik, Vladimír Horský, Eva Hladká, Radka Svobodová Vareková, Karel Berka |
2DProts: database of family-wide protein secondary structure diagrams. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael F. Lin, Xiaodong Bai, William J. Salerno, Jeffrey G. Reid |
Sparse Project VCF: efficient encoding of population genotype matrices. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Haowen Zhang, Haoran Li, Chirag Jain, Haoyu Cheng, Kin Fai Au, Heng Li 0002, Srinivas Aluru |
Real-time mapping of nanopore raw signals. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Masaki Asada, Makoto Miwa, Yutaka Sasaki |
Using drug descriptions and molecular structures for drug-drug interaction extraction from literature. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alexis Coullomb, Vera Pancaldi |
Tysserand - fast and accurate reconstruction of spatial networks from bioimages. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Oliver P. Watson, Isidro Cortes-Ciriano, James A. Watson |
A semi-supervised learning framework for quantitative structure-activity regression modelling. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Neha Warikoo, Yung-Chun Chang, Wen-Lian Hsu |
LBERT: Lexically aware Transformer-based Bidirectional Encoder Representation model for learning universal bio-entity relations. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yasin Kaymaz, Florian Ganglberger, Ming Tang, Christian Haslinger, Francesc Fernández-Albert, Nathan Lawless, Timothy B. Sackton |
HieRFIT: a hierarchical cell type classification tool for projections from complex single-cell atlas datasets. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jike Wang, Huiyong Sun, Jiawen Chen, Dejun Jiang 0002, Zhe Wang 0041, Zhenxing Wu, Xi Chen, Dong-Sheng Cao 0001, Tingjun Hou |
DeepChargePredictor: a web server for predicting QM-based atomic charges via state-of-the-art machine-learning algorithms. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Hongxin He, Manhong Shi, Yuxin Lin, Chaoying Zhan, Rongrong Wu, Cheng Bi, Xingyun Liu, Shumin Ren, Bairong Shen |
HFBD: a biomarker knowledge database for heart failure heterogeneity and personalized applications. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Haixiang Zhang, Yinan Zheng, Lifang Hou, Cheng Zheng, Lei Liu 0004 |
Mediation analysis for survival data with high-dimensional mediators. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yanan Wang 0003, Litao Yang, Geoffrey I. Webb, Zongyuan Ge, Jiangning Song |
OCTID: a one-class learning-based Python package for tumor image detection. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yahui Long, Min Wu 0008, Yong Liu 0020, Jie Zheng 0002, Chee Keong Kwoh 0001, Jiawei Luo 0001, Xiaoli Li 0001 |
Graph contextualized attention network for predicting synthetic lethality in human cancers. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Zahra Razaghi-Moghadam, Zoran Nikoloski |
GeneReg: a constraint-based approach for design of feasible metabolic engineering strategies at the gene level. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Hao Wang 0109, Pengfei Liang, Lei Zheng, Chunshen Long, Hanshuang Li, Yongchun Zuo |
eHSCPr discriminating the cell identity involved in endothelial to hematopoietic transition. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Daniel A. Nissley, Anna Carbery, Mark Chonofsky, Charlotte M. Deane |
Ribosome occupancy profiles are conserved between structurally and evolutionarily related yeast domains. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Hue V. Reardon, Anney Che, Brian T. Luke, Sarangan Ravichandran, Jack R. Collins, Uma S. Mudunuri |
AVIA 3.0: interactive portal for genomic variant and sample level analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Robert W. Gregg, Fathima Shabnam, Jason E. Shoemaker |
Agent-based modeling reveals benefits of heterogeneous and stochastic cell populations during cGAS-mediated IFNβ production. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Peter Ebert, Marcel H. Schulz |
Fast detection of differential chromatin domains with SCIDDO. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yuqing Zhang, Prasad Patil, W. Evan Johnson, Giovanni Parmigiani |
Robustifying genomic classifiers to batch effects via ensemble learning. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Joris Cadow, Matteo Manica, Roland Mathis, Tiannan Guo, Ruedi Aebersold, María Rodríguez Martínez |
On the feasibility of deep learning applications using raw mass spectrometry data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Victor-Bogdan Popescu, José Ángel Sánchez Martín, Daniela Schacherer, Sadra Safadoust, Negin Majidi, Andrei Andronescu, Alexandru Nedea, Diana Ion, Eduard Mititelu, Eugen Czeizler, Ion Petre |
NetControl4BioMed: a web-based platform for controllability analysis of protein-protein interaction networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Shixu He, Zhibo Huang, Xiaohan Wang, Lin Fang, Shengkang Li, Yong Zhang 0036, Gengyun Zhang |
SOAPMetaS: profiling large metagenome datasets efficiently on distributed clusters. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Guoxian Yu, Guangjie Zhou, Xiangliang Zhang 0001, Carlotta Domeniconi, Maozu Guo 0001 |
DMIL-IsoFun: predicting isoform function using deep multi-instance learning. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Mark Jayson Cortez, Hyukpyo Hong, Boseung Choi, Jae Kyoung Kim, Kresimir Josic |
Hierarchical Bayesian models of transcriptional and translational regulation processes with delays. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Francesco Bardozzo, Pietro Lió, Roberto Tagliaferri |
Signal metrics analysis of oscillatory patterns in bacterial multi-omic networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ramesh Rajaby, Wing-Kin Sung |
SurVIndel: improving CNV calling from high-throughput sequencing data through statistical testing. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Pengyuan Li 0001, Xiangying Jiang, Gongbo Zhang, Juan Trelles Trabucco, Daniela Raciti, Cynthia L. Smith, Martin Ringwald, G. Elisabeta Marai, Cecilia N. Arighi, Hagit Shatkay |
Utilizing image and caption information for biomedical document classification. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Nils Eling, Nicolas Damond, Tobias Hoch, Bernd Bodenmiller |
cytomapper: an R/Bioconductor package for visualization of highly multiplexed imaging data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Urminder Singh, Eve Syrkin Wurtele |
orfipy: a fast and flexible tool for extracting ORFs. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Georgios Iakovou, Mousa Alhazzazi, Steven Hayward, Stephen D. Laycock |
DockIT: a tool for interactive molecular docking and molecular complex construction. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Uriel Singer, Kira Radinsky, Eric Horvitz |
On biases of attention in scientific discovery. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Laura Baumgartner, J. J. Reagh, Miguel Ángel González Ballester, Jérôme Noailly |
Simulating intervertebral disc cell behaviour within 3D multifactorial environments. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Qingqing Huang, Zhengtang Tan, Yanjing Li, Wenzhu Wang, Mei Lang, Changying Li, Zhiyun Guo |
Tfcancer: a manually curated database of transcription factors associated with human cancers. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Gabriel E. Hoffman, Panos Roussos |
Dream: powerful differential expression analysis for repeated measures designs. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Chunman Zuo, Hao Dai, Luonan Chen |
Deep cross-omics cycle attention model for joint analysis of single-cell multi-omics data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Zheng-Chang Lu, Fan Jiang, Yun-Dong Wu |
Phosphate binding sites prediction in phosphorylation-dependent protein-protein interactions. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jordan Douglas |
UglyTrees: a browser-based multispecies coalescent tree visualizer. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Arnav Moudgil, Daofeng Li, Silas Hsu, Deepak Purushotham, Ting Wang, Robi D. Mitra |
The qBED track: a novel genome browser visualization for point processes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jasmin Hafner, Vassily Hatzimanikatis |
NICEpath: Finding metabolic pathways in large networks through atom-conserving substrate-product pairs. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Martin Rydén, Martin Englund, Neserin Ali |
ProteoMill: efficient network-based functional analysis portal for proteomics data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Thin Nguyen, Hang Le 0003, Thomas P. Quinn, Tri Nguyen, Thuc Duy Le, Svetha Venkatesh |
GraphDTA: predicting drug-target binding affinity with graph neural networks. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jacob M. Schreiber, Jeffrey A. Bilmes, William Stafford Noble |
Prioritizing transcriptomic and epigenomic experiments using an optimization strategy that leverages imputed data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Calvin Chi, Yuting Ye, Bin Chen, Haiyan Huang |
Bipartite graph-based approach for clustering of cell lines by gene expression-drug response associations. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Sebastian Deorowicz, Agnieszka Danek, Marek Kokot |
VCFShark: how to squeeze a VCF file. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Mengyun Wu, Xing Qin, Shuangge Ma |
GEInter: an R package for robust gene-environment interaction analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | James H. Joly, William E. Lowry, Nicholas A. Graham |
Differential Gene Set Enrichment Analysis: a statistical approach to quantify the relative enrichment of two gene sets. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Sapir Margalit, Yotam Abramson, Hila Sharim, Zohar Manber, Surajit Bhattacharya, Yi-Wen Chen, Eric Vilain, Hayk Barseghyan, Ran Elkon, Roded Sharan, Yuval Ebenstein |
Long reads capture simultaneous enhancer-promoter methylation status for cell-type deconvolution. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Alisa Pavel, Antonio Federico, Giusy del Giudice, Angela Serra, Dario Greco |
VOLTA: adVanced mOLecular neTwork Analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Shuang Song 0006, Nayang Shan, Geng Wang, Xiting Yan, Jun S. Liu, Lin Hou |
Openness weighted association studies: leveraging personal genome information to prioritize non-coding variants. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Michaela Areti Zervou, Effrosyni Doutsi, Pavlos Pavlidis, Panagiotis Tsakalides |
Structural classification of proteins based on the computationally efficient recurrence quantification analysis and horizontal visibility graphs. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Saptarshi Sinha, Sourabh Samaddar, Sujoy K. Das Gupta, Soumen Roy |
Network approach to mutagenesis sheds insight on phage resistance in mycobacteria. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yuansheng Liu, Xiaocai Zhang, Quan Zou 0001, Xiangxiang Zeng |
Minirmd: accurate and fast duplicate removal tool for short reads via multiple minimizers. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ling Cai, Hongyu Liu, John D. Minna, Ralph J. Deberardinis, Guanghua Xiao, Yang Xie |
Assessing consistency across functional screening datasets in cancer cells. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Gen Li, Shailesh Kumar Panday, Yunhui Peng, Emil Alexov |
SAMPDI-3D: predicting the effects of protein and DNA mutations on protein-DNA interactions. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Parker Knight, Marie-Pierre L. Gauthier, Carolina E. Pardo, Russell P. Darst, Kevin Kapadia, Hadley Browder, Eliza Morton, Alberto Riva, Michael P. Kladde, Rhonda Bacher |
Methylscaper: an R/Shiny app for joint visualization of DNA methylation and nucleosome occupancy in single-molecule and single-cell data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Nam D. Nguyen, Ting Jin, Daifeng Wang |
Varmole: a biologically drop-connect deep neural network model for prioritizing disease risk variants and genes. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Derek W. Brown, Timothy A. Myers, Mitchell J. Machiela |
PCAmatchR: a flexible R package for optimal case-control matching using weighted principal components. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Carlos Pintado, Jaime Santos, Valentín Iglesias, Salvador Ventura |
SolupHred: a server to predict the pH-dependent aggregation of intrinsically disordered proteins. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Michael A. Skinnider, Charley Cai, R. Greg Stacey, Leonard J. Foster |
PrInCE: an R/Bioconductor package for protein-protein interaction network inference from co-fractionation mass spectrometry data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Xiaoyang Jing, Jinbo Xu |
Improved protein model quality assessment by integrating sequential and pairwise features using deep learning. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Johan Nyström-Persson, Gabriel Keeble-Gagnère, Niamat Zawad |
Compact and evenly distributed k-mer binning for genomic sequences. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Burak T. Kaynak, She Zhang, Ivet Bahar, Pemra Doruker |
ClustENMD: efficient sampling of biomolecular conformational space at atomic resolution. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | |
Corrigendum to: HALPER facilitates the identification of regulatory element orthologs across species. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Denise Wolrab, Eva Cífková, Pavel Cán, Miroslav Lísa, Ondrej Peterka, Michaela Chocholousková, Robert Jirásko, Michal Holcapek |
LipidQuant 1.0: automated data processing in lipid class separation-mass spectrometry quantitative workflows. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Santi Santichaivekin, Qing Yang, Jingyi Liu, Ross Mawhorter, Justin Jiang, Trenton Wesley, Yi-Chieh Wu, Ran Libeskind-Hadas |
eMPRess: a systematic cophylogeny reconciliation tool. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Haizi Zheng, Michelle S. Zhu, Yaping Liu |
FinaleDB: a browser and database of cell-free DNA fragmentation patterns. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Xi Zeng, Linghao Zhao, Chenhang Shen, Yi Zhou, Guoliang Li, Wing-Kin Sung |
HIVID2: an accurate tool to detect virus integrations in the host genome. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Xizhi Luo, Fei Qin, Guoshuai Cai, Feifei Xiao |
Integrating genomic correlation structure improves copy number variations detection. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Vitor Pereira 0001, Fernando Cruz, Miguel Rocha 0001 |
MEWpy: a computational strain optimization workbench in Python. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Qiang Hu, Alan David Hutson, Song Liu, Martin Morgan, Qian Liu |
Bioconductor toolchain for reproducible bioinformatics pipelines using Rcwl and RcwlPipelines. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Jan Niclas Wolf, Marcus Keßler, Jörg Ackermann 0001, Ina Koch |
PTGL: extension to graph-based topologies of cryo-EM data for large protein structures. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Fatemeh Almodaresi, Mohsen Zakeri, Rob Patro |
PuffAligner: a fast, efficient and accurate aligner based on the Pufferfish index. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | David R. Stirling, Anne E. Carpenter, Beth A. Cimini |
CellProfiler Analyst 3.0: accessible data exploration and machine learning for image analysis. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Mengyun Yang, Lan Huang, Yunpei Xu, Chengqian Lu, Jianxin Wang 0001 |
Heterogeneous graph inference with matrix completion for computational drug repositioning. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Deshan Zhou, Zhijian Xu, Wentao Li, Xiaolan Xie, Shaoliang Peng |
MultiDTI: drug-target interaction prediction based on multi-modal representation learning to bridge the gap between new chemical entities and known heterogeneous network. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Abdur Rahman Mohd Abul Basher, Steven J. Hallam |
Leveraging heterogeneous network embedding for metabolic pathway prediction. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Po-Ting Lai, Zhiyong Lu |
BERT-GT: cross-sentence n-ary relation extraction with BERT and Graph Transformer. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Yang Lin, Xiaoyong Pan, Hong-Bin Shen |
lncLocator 2.0: a cell-line-specific subcellular localization predictor for long non-coding RNAs with interpretable deep learning. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Sorin Draghici, Tuan-Minh Nguyen, Larry A. Sonna, Cordelia Ziraldo, Radu Vanciu, Raef Fadel, Austin Morrison, Rachel M. Kenney, George Alangaden, Mayur Ramesh, Gil Mor |
COVID-19: disease pathways and gene expression changes predict methylprednisolone can improve outcome in severe cases. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Bilal Shaker, Myeong-Sang Yu, Jin Sook Song, Sunjoo Ahn, Jae Yong Ryu, Kwang-Seok Oh, Dokyun Na |
LightBBB: computational prediction model of blood-brain-barrier penetration based on LightGBM. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Elan Ness-Cohn, Rosemary Braun |
TimeCycle: topology inspired method for the detection of cycling transcripts in circadian time-series data. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Chubing Zeng, Duncan C. Thomas, Juan Pablo Lewinger |
Incorporating prior knowledge into regularized regression. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
|
| 1 | Ting-Hsuan Wang, Cheng-Ching Huang, Jui-Hung Hung |
EARRINGS: an efficient and accurate adapter trimmer entails no a priori adapter sequences. |
Bioinform. |
2021 |
DBLP DOI BibTeX RDF |
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