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Found 16824 publication records. Showing 16824 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
1 | Raghvendra Mall, Abdurrahman Elbasir, Hossam Almeer, Zeyaul Islam, Prasanna R. Kolatkar, Sanjay Chawla, Ehsan Ullah |
A modeling framework for embedding-based predictions for compound-viral protein activity. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2544-2555, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Chirag Jain, Neda Tavakoli, Srinivas Aluru |
A variant selection framework for genome graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(Supplement), pp. 460-467, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Darawan Rinchai, Jessica Roelands, Mohammed Toufiq, Wouter Hendrickx, Matthew C. Altman, Davide Bedognetti, Damien Chaussabel |
BloodGen3Module: blood transcriptional module repertoire analysis and visualization using R. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(16), pp. 2382-2389, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Marleen Balvert, Xiao Luo, Ernestina Hauptfeld, Alexander Schönhuth, Bas E. Dutilh |
OGRE: Overlap Graph-based metagenomic Read clustEring. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(7), pp. 905-912, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Zhemin Zhou, Jane Charlesworth, Mark Achtman |
HierCC: a multi-level clustering scheme for population assignments based on core genome MLST. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(20), pp. 3645-3646, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Baldomero Imbernón, Antonio Serrano, Andrés Bueno-Crespo, José L. Abellán, Horacio Pérez Sánchez, José M. Cecilia |
METADOCK 2: a high-throughput parallel metaheuristic scheme for molecular docking. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(11), pp. 1515-1520, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Alan Zammit, Leon S. Helwerda, René C. L. Olsthoorn, Fons J. Verbeek, Alexander P. Gultyaev |
A database of flavivirus RNA structures with a search algorithm for pseudoknots and triple base interactions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(7), pp. 956-962, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | R. Pinto-Cámara, Alejandro Linares, D. S. Moreno-Gutiérrez, Haydee O. Hernández, Jose Damian Martinez Reyes, J. M. Rendón-Mancha, Christopher D. Wood, Adán Guerrero |
FCSlib: an open-source tool for fluorescence fluctuation spectroscopy analysis for mobility, number and molecular brightness in R. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(13), pp. 1930-1931, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Jin Li, Jinbo Xu |
Study of real-valued distance prediction for protein structure prediction with deep learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(19), pp. 3197-3203, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Lennart Langouche, April Joy C. Aralar, Mridu Sinha, Shelley M. Lawrence, Stephanie I Fraley, Todd P. Coleman |
Data-driven noise modeling of digital DNA melting analysis enables prediction of sequence discriminating power. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(22-23), pp. 5337-5343, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Stelios K. Mylonas, Apostolos Axenopoulos, Petros Daras |
DeepSurf: a surface-based deep learning approach for the prediction of ligand binding sites on proteins. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(12), pp. 1681-1690, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Dandan Huang, Zhao Wang, Yao Zhou, Qian Liang, Pak Chung Sham, Hongcheng Yao, Mulin Jun Li |
vSampler: fast and annotation-based matched variant sampling tool. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(13), pp. 1915-1917, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Andres M. Cifuentes-Bernal, Vu Viet Hoang Pham, Xiaomei Li, Lin Liu 0003, Jiuyong Li, Thuc Duy Le |
A pseudotemporal causality approach to identifying miRNA-mRNA interactions during biological processes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(6), pp. 807-814, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Prasun Kumar, Derek N. Woolfson |
Socket2: a program for locating, visualizing and analyzing coiled-coil interfaces in protein structures. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(23), pp. 4575-4577, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Sandra Dérozier, Pierre Nicolas, Ulrike Mäder, Cyprien Guérin |
Genoscapist: online exploration of quantitative profiles along genomes via interactively customized graphical representations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2747-2749, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | William G. La Cava, Heather Williams, Weixuan Fu, Steven Vitale, Durga Srivatsan, Jason H. Moore |
Evaluating recommender systems for AI-driven biomedical informatics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(2), pp. 250-256, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Marco Necci, Damiano Piovesan, Damiano Clementel, Zsuzsanna Dosztányi, Silvio C. E. Tosatto |
MobiDB-lite 3.0: fast consensus annotation of intrinsic disorder flavors in proteins. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(22-23), pp. 5533-5534, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Jonathon Lefaive, Albert V. Smith, Hyun Min Kang, Gonçalo R. Abecasis |
Sparse allele vectors and the savvy software suite. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(22), pp. 4248-4250, November 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Jose Lugo-Martinez, Daniel Zeiberg, Thomas Gaudelet, Noël Malod-Dognin, Natasa Przulj, Predrag Radivojac |
Classification in biological networks with hypergraphlet kernels. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(7), pp. 1000-1007, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Juan Carlos Aledo |
ptm: an R package for the study of methionine sulfoxidation and other posttranslational modifications. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(21), pp. 3979-3980, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | John F. Ouyang, Uma S. Kamaraj, Elaine Y. Cao, Owen J. L. Rackham |
ShinyCell: simple and sharable visualization of single-cell gene expression data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(19), pp. 3374-3376, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Wang Liu-Wei, Senay Kafkas, Jun Chen 0021, Nicholas J. Dimonaco, Jesper Tegnér, Robert Hoehndorf |
DeepViral: prediction of novel virus-host interactions from protein sequences and infectious disease phenotypes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2722-2729, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Mikko Rautiainen, Tobias Marschall |
MBG: Minimizer-based sparse de Bruijn Graph construction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(16), pp. 2476-2478, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Fabio D. Steffen, Roland K. O. Sigel, Richard Börner |
FRETraj: integrating single-molecule spectroscopy with molecular dynamics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(21), pp. 3953-3955, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Jun Liu, Kai-Long Zhao, Guang-Xing He, Liu-Jing Wang, Xiao-Gen Zhou, Gui-Jun Zhang |
A de novo protein structure prediction by iterative partition sampling, topology adjustment and residue-level distance deviation optimization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(1), pp. 99-107, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Vladimir Smirnov, Tandy J. Warnow |
MAGUS: Multiple sequence Alignment using Graph clUStering. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(12), pp. 1666-1672, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Felix Kallenborn, Andreas Hildebrandt 0001, Bertil Schmidt |
CARE: context-aware sequencing read error correction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(7), pp. 889-895, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Juan Shu, Yu Li 0006, Sheng Wang 0012, Bowei Xi, Jianzhu Ma |
Disease gene prediction with privileged information and heteroscedastic dropout. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(Supplement), pp. 410-417, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Thomas Peacock, James M. Heather, Tahel Ronel, Benny Chain |
Decombinator V4: an improved AIRR compliant-software package for T-cell receptor sequence annotation? ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(6), pp. 876-878, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Luca Denti, Yuri Pirola, Marco Previtali, Tamara Ceccato, Gianluca Della Vedova, Raffaella Rizzi, Paola Bonizzoni |
Shark: fishing relevant reads in an RNA-Seq sample. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(4), pp. 464-472, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Jennifer L. Harrow, Rachel Drysdale, Andrew Smith, Susanna Repo, Jerry Lanfear, Niklas Blomberg |
ELIXIR: providing a sustainable infrastructure for life science data at European scale. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(14), pp. 2506-2511, August 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Oleksii Nikolaienko, Per Eystein Lønning, Stian Knappskog |
ramr: an R/Bioconductor package for detection of rare aberrantly methylated regions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(1), pp. 133-140, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Olga I. Zolotareva, Sahand Khakabimamaghani, Olga I Isaeva, Zoe Chervontseva, Alexey Savchik, Martin Ester |
Identification of differentially expressed gene modules in heterogeneous diseases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(12), pp. 1691-1698, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Rajeeva Musunuri, Kanika Arora, André Corvelo, Minita Shah, Jennifer Shelton, Michael C. Zody, Giuseppe Narzisi |
Somatic variant analysis of linked-reads sequencing data with Lancet. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(13), pp. 1918-1919, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Michael B. Sohn, Jiarui Lu, Hongzhe Li |
A compositional mediation model for a binary outcome: Application to microbiome studies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(1), pp. 16-21, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Anton Pirogov, Peter Pfaffelhuber, Angelika Börsch-Haubold, Bernhard Haubold |
High-complexity regions in mammalian genomes are enriched for developmental genes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(19), pp. 3388, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Varsha D. Badal, Petras J. Kundrotas, Ilya A. Vakser |
Text mining for modeling of protein complexes enhanced by machine learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(4), pp. 497-505, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | László Dobson, András Zeke, Gábor E. Tusnády |
PolarProtPred: predicting apical and basolateral localization of transmembrane proteins using putative short linear motifs and deep learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(23), pp. 4328-4335, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Saifur Rahaman, Xiangtao Li, Jun Yu, Ka-Chun Wong |
CancerEMC: frontline non-invasive cancer screening from circulating protein biomarkers and mutations in cell-free DNA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(19), pp. 3319-3327, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | David Roura Padrosa, Valentina Marchini, Francesca Paradisi |
CapiPy: python-based GUI-application to assist in protein immobilization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2761-2762, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Quang Tran, Alexej Abyzov |
LongAGE: defining breakpoints of genomic structural variants through optimal and memory efficient alignments of long reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(7), pp. 1015-1017, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Taylor Jones, Samuel B. Day, Luke Myers, James E. Crowe Jr., Cinque S. Soto |
ClonoMatch: a tool for identifying homologous immunoglobulin and T-cell receptor sequences in large databases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(24), pp. 5695-5697, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Octavio Morante-Palacios, Esteban Ballestar |
shinyÉPICo: a graphical pipeline to analyze Illumina DNA methylation arrays. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(2), pp. 257-259, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Shani Cohen, Lior Rokach, Yair Motro, Jacob Moran-Gilad, Isana Veksler-Lublinsky |
minMLST: machine learning for optimization of bacterial strain typing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(3), pp. 303-311, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
1 | Peiliang Lou, Yuxin Dong, Antonio Jimeno-Yepes, Chen Li 0011 |
A representation model for biological entities by fusing structured axioms with unstructured texts. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(8), pp. 1156-1163, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Zekun Yin, Xiaoming Xu, Jinxiao Zhang, Yanjie Wei, Bertil Schmidt, Weiguo Liu |
RabbitMash: accelerating hash-based genome analysis on modern multi-core architectures. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(6), pp. 873-875, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Kishlay Jha, Guangxu Xun, Aidong Zhang |
Continual representation learning for evolving biomedical bipartite networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(15), pp. 2190-2197, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Antonio de Falco, Zoltán Dezsö, Francesco Ceccarelli, Luigi Cerulo, Angelo Ciaramella, Michele Ceccarelli |
Adaptive one-class Gaussian processes allow accurate prioritization of oncology drug targets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(10), pp. 1420-1427, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Kimberly E. Taylor, K. Mark Ansel, Alexander Marson, Lindsey A. Criswell, Kyle Kai-How Farh |
PICS2: next-generation fine mapping via probabilistic identification of causal SNPs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(18), pp. 3004-3007, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Abhinav Kaushik, Diane Dunham, Ziyuan He, Monali Manohar, Manisha Desai, Kari C. Nadeau, Sandra Andorf |
CyAnno: a semi-automated approach for cell type annotation of mass cytometry datasets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(22), pp. 4164-4171, November 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Yoann Anselmetti, Nadia El-Mabrouk, Manuel Lafond, Aïda Ouangraoua |
Gene tree and species tree reconciliation with endosymbiotic gene transfer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(Supplement), pp. 120-132, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Krutik Patel, S. Chandrasegaran, I M. Clark, Carole J. Proctor, D. A. Young, Daryl P. Shanley |
TimiRGeN: R/Bioconductor package for time series microRNA-mRNA integration and analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(20), pp. 3604-3609, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Marie Macnee, Eduardo Pérez-Palma, Sarah Schumacher-Bass, Jarrod Dalton, Costin Leu, Daniel J. Blankenberg, Dennis Lal |
SimText: a text mining framework for interactive analysis and visualization of similarities among biomedical entities. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(22), pp. 4285-4287, November 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Yuzhou Chang, Carter Allen, Changlin Wan, Dongjun Chung, Chi Zhang 0021, Zihai Li, Qin Ma 0003 |
IRIS-FGM: an integrative single-cell RNA-Seq interpretation system for functional gene module analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(18), pp. 3045-3047, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Lucy Sinke, Davy Cats, Bastiaan T. Heijmans |
Omixer: multivariate and reproducible sample randomization to proactively counter batch effects in omics studies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(18), pp. 3051-3052, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Dongyuan Song, Kexin Li, Zachary Hemminger, Roy Wollman, Jingyi Jessica Li |
scPNMF: sparse gene encoding of single cells to facilitate gene selection for targeted gene profiling. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(Supplement), pp. 358-366, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Martin Pirkl, Niko Beerenwinkel |
Inferring perturbation profiles of cancer samples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(16), pp. 2441-2449, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Andrew Olson, Doreen Ware |
Ranked choice voting for representative transcripts with TRaCE. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(1), pp. 261-264, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Mingming Gong, Peng Liu, Frank C. Sciurba, Petar Stojanov, Dacheng Tao, George C. Tseng, Kun Zhang 0001, Kayhan Batmanghelich |
Unpaired data empowers association tests. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(6), pp. 785-792, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Yasin Ilkagan Tepeli, Ali Burak Ünal, Furkan Mustafa Akdemir, Öznur Tastan |
PAMOGK: a pathway graph kernel-based multiomics approach for patient clustering. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(21), pp. 5237-5246, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Alan E. Murphy, Brian M. Schilder, Nathan G. Skene |
MungeSumstats: a Bioconductor package for the standardization and quality control of many GWAS summary statistics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(23), pp. 4593-4596, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Le Zhang 0004, Guangdi Liu, Meijing Kong, Tingting Li, Dan Wu, Xiaobo Zhou 0001, Chuanwei Yang, Lei Xia, Zhenzhou Yang, Luonan Chen |
Revealing dynamic regulations and the related key proteins of myeloma-initiating cells by integrating experimental data into a systems biological model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(11), pp. 1554-1561, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Arunabha Majumdar, Kathryn S. Burch, Tanushree Haldar, Sriram Sankararaman, Bogdan Pasaniuc, W. James Gauderman, John S. Witte |
A two-step approach to testing overall effect of gene-environment interaction for multiple phenotypes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(24), pp. 5640-5648, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Alexis Hardy, Mélody Matelot, Amandine Touzeau, Christophe Klopp, Céline Lopez-Roques, Sandra Duharcourt, Matthieu Defrance |
DNAModAnnot: a R toolbox for DNA modification filtering and annotation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2738-2740, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Zihao Zheng, Aisha M. Mergaert, Irene M. Ong, Miriam A. Shelef, Michael A. Newton |
MixTwice: large-scale hypothesis testing for peptide arrays by variance mixing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2637-2643, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Santiago Codesido, Mohamed Hanafi, Yoric Gagnebin, Víctor González-Ruiz, Serge Rudaz, Julien Boccard |
Network principal component analysis: a versatile tool for the investigation of multigroup and multiblock datasets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(9), pp. 1297-1303, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Matthew Kerin, Jonathan Marchini |
A non-linear regression method for estimation of gene-environment heritability. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(24), pp. 5632-5639, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Guillaume E. Scholz, Benjamin Linard, Nikolai Romashchenko, Eric Rivals, Fabio Pardi |
Rapid screening and detection of inter-type viral recombinants using phylo-k-mers. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(22-23), pp. 5351-5360, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Carl Beuchel, Holger Kirsten, Uta Ceglarek, Markus Scholz |
Metabolite-Investigator: an integrated user-friendly workflow for metabolomics multi-study analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(15), pp. 2218-2220, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Andreas Rempel, Roland Wittler |
SANS serif: alignment-free, whole-genome-based phylogenetic reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(24), pp. 4868-4870, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Ramiro Magno, Isabel Duarte, Ana-Teresa Maia |
quincunx: an R package to query, download and wrangle PGS Catalog data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(1), pp. 294-296, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Fan Yang, Kevin J. Gleason, Jiebiao Wang, Jubao Duan, Xin He, Brandon L. Pierce, Lin S. Chen |
CCmed: cross-condition mediation analysis for identifying replicable trans-associations mediated by cis-gene expression. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2513-2520, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Laurent Excoffier, Nina Marchi, David Alexander Marques, Remi Matthey-Doret, Alexandre Gouy, Vitor C. Sousa |
fastsimcoal2: demographic inference under complex evolutionary scenarios. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(24), pp. 4882-4885, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Joan Carles Pons, David Páez-Espino, Gabriel Riera, Natalia Ivanova, Nikos Kyrpides, Mercè Llabrés |
VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(13), pp. 1805-1813, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Thomas Gatter, Peter F. Stadler |
Ryūtō: improved multi-sample transcript assembly for differential transcript expression analysis and more. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(23), pp. 4307-4313, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Borja Freire, Susana Ladra, José R. Paramá, Leena Salmela |
Inference of viral quasispecies with a paired de Bruijn graph. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(4), pp. 473-481, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Hiroshi Mori, Hitoshi Ishikawa, Koichi Higashi, Yoshiaki Kato, Toshikazu Ebisuzaki, Ken Kurokawa |
PZLAST: an ultra-fast amino acid sequence similarity search server against public metagenomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(21), pp. 3944-3946, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Wanson Choi, Yang Luo, Soumya Raychaudhuri, Buhm Han |
HATK: HLA analysis toolkit. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(3), pp. 416-418, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Yangyang Hu, Wenxiu Ma |
EnHiC: learning fine-resolution Hi-C contact maps using a generative adversarial framework. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(Supplement), pp. 272-279, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Michael Menzel, Sabine Hurka, Stefan Glasenhardt, Andreas Gogol-Döring |
NoPeak: k-mer-based motif discovery in ChIP-Seq data without peak calling. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(5), pp. 596-602, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Kexin Huang, Tianfan Fu, Lucas M. Glass, Marinka Zitnik, Cao Xiao, Jimeng Sun 0001 |
DeepPurpose: a deep learning library for drug-target interaction prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(22-23), pp. 5545-5547, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Filomeno Sánchez Rodríguez, Shahram Mesdaghi, Adam J. Simpkin, J. Javier Burgos-Mármol, David L. Murphy, Ville Uski, Ronan M. Keegan, Daniel J. Rigden |
ConPlot: web-based application for the visualization of protein contact maps integrated with other data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2763-2765, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Benjamin M. Good, Kimberly Van Auken, David P. Hill, Huaiyu Mi, Seth Carbon, James P. Balhoff, Laurent-Philippe Albou, Paul D. Thomas, Christopher J. Mungall, Judith A. Blake, Peter D'Eustachio |
Reactome and the Gene Ontology: digital convergence of data resources. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(19), pp. 3343-3348, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Gang Xu, Qinghua Wang, Jianpeng Ma |
OPUS-X: an open-source toolkit for protein torsion angles, secondary structure, solvent accessibility, contact map predictions and 3D folding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(1), pp. 108-114, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Peter Hettegger, Klemens Vierlinger, Andreas Weinhäusel |
Random rotation for identifying differentially expressed genes with linear models following batch effect correction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(15), pp. 2142-2149, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Saisai Sun, Wenkai Wang, Zhenling Peng, Jianyi Yang |
RNA inter-nucleotide 3D closeness prediction by deep residual neural networks. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(8), pp. 1093-1098, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Divon Lan, Raymond Tobler, Yassine Souilmi, Bastien Llamas |
Genozip: a universal extensible genomic data compressor. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(16), pp. 2225-2230, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Anthony Xu, Aravind Venkateswaran, Lianguizi Zhou, Andreas Zankl |
Ontoclick: a web browser extension to facilitate biomedical knowledge curation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 38(1), pp. 301-302, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Ron Zeira, Ron Shamir |
Sorting cancer karyotypes using double-cut-and-joins, duplications and deletions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(11), pp. 1489-1496, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Zachary B. Abrams, Caitlin E. Coombes, Suli Li, Kevin R. Coombes |
Mercator: a pipeline for multi-method, unsupervised visualization and distance generation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2780-2781, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Juan Saez Hidalgo, Karen Y. Oróstica, Anamaria Sanchez-Daza, Alvaro Olivera-Nappa |
BEST: a Shiny/R web-based application to easily retrieve cross-related enzyme functional parameters and information from BRENDA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(10), pp. 1480-1481, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Pol Castellano-Escuder, Cristina Andres-Lacueva, Alex Sánchez-Pla |
The fobitools framework: the first steps towards food enrichment analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(21), pp. 3969-3971, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | John Zobolas, Vasundra Touré, Martin Kuiper, Steven Vercruysse |
UniBioDicts: Unified access to Biological Dictionaries. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(1), pp. 143-144, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Marzieh Ayati, Mark R. Chance, Mehmet Koyutürk |
Co-phosphorylation networks reveal subtype-specific signaling modules in breast cancer. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(2), pp. 221-228, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Yan Gao, Yongzhuang Liu, Yanmei Ma, Bo Liu 0023, Yadong Wang, Yi Xing |
Erratum to: abPOA: an SIMD-based C library for fast partial order alignment using adaptive band. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(19), pp. 3384, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Inna Chervoneva, Amy R. Peck, Misung Yi, Boris Freydin, Hallgeir Rui |
Quantification of spatial tumor heterogeneity in immunohistochemistry staining images. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(10), pp. 1452-1460, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Yujie Chen, Tengfei Ma 0002, Xixi Yang, Jianmin Wang, Bosheng Song, Xiangxiang Zeng |
MUFFIN: multi-scale feature fusion for drug-drug interaction prediction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(17), pp. 2651-2658, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Haoyun Lei, E. Michael Gertz, Alejandro A. Schäffer, Xuecong Fu, Yifeng Tao, Kerstin Heselmeyer-Haddad, Irianna Torres, Guibo Li, Liqin Xu, Yong Hou, Kui Wu 0005, Xulian Shi, Michael Dean, Thomas Ried, Russell Schwartz |
Tumor heterogeneity assessed by sequencing and fluorescence in situ hybridization (FISH) data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(24), pp. 4704-4711, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Qinglin Mei, Guojun Li, Zhengchang Su |
Clustering single-cell RNA-seq data by rank constrained similarity learning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(19), pp. 3235-3242, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
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1 | Rudan Xu, Zahra Razaghi-Moghadam, Zoran Nikoloski |
Maximization of non-idle enzymes improves the coverage of the estimated maximal in vivo enzyme catalytic rates in Escherichia coli. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(21), pp. 3848-3855, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
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